mRNA_H-elongata_contig206031.5888.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig206031.5888.1 vs. uniprot
Match: D7G3L9_ECTSI (Monooxygenase, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3L9_ECTSI) HSP 1 Score: 218 bits (554), Expect = 4.850e-66 Identity = 108/137 (78.83%), Postives = 120/137 (87.59%), Query Frame = 1
Query: 1 EEYEEIMKLNVVRPVVVTGVTRTTMGTFLVDTDCLLGGSPNRWEARAVISAAGSHKSPDWPRLPGAETFKGVQIHSSQYRSAEDFRGARVAVVGSGNSGAQILAEVSQPGIAASTLWSTSEEPSFLPVGFSGKDIFD 411
EEYE +MKLNVVRPV VTGV+RT MGTFLV+TDCLLGG+ RWEAR VISAAG+H SP WPRLPG ETF+G QIHSSQYR A+DFRG +VAVVGSGNSGAQILAEVS PG+A+STLWST PSFLP+G SGK+IFD
Sbjct: 156 EEYESVMKLNVVRPVNVTGVSRTPMGTFLVETDCLLGGTVARWEARTVISAAGTHASPVWPRLPGWETFRGTQIHSSQYRFADDFRGKKVAVVGSGNSGAQILAEVSAPGVASSTLWSTLTAPSFLPMGLSGKEIFD 292
BLAST of mRNA_H-elongata_contig206031.5888.1 vs. uniprot
Match: A0A1T5NLG5_9BACT (Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD n=2 Tax=Chitinophagaceae TaxID=563835 RepID=A0A1T5NLG5_9BACT) HSP 1 Score: 114 bits (285), Expect = 8.390e-28 Identity = 67/137 (48.91%), Postives = 86/137 (62.77%), Query Frame = 1
Query: 1 EEYEEIMKLNVVRPVVVTGVTRTTMGTFLVDTDCLLGGSPNRWEARAVISAAGSHKSPDWPRLPGAETFKGVQIHSSQYRSAEDFRGARVAVVGSGNSGAQILAEVSQPGIAASTLWSTSEEPSFLPVGFSGKDIFD 411
+EYE K V RPV VT V + TF++ T + + A+A++SA GS+ +P P +PG+ +FKG +HSSQYR EDF G RVA+VG GNSGAQILAEVS+ AS LW T + P FLP GK +FD
Sbjct: 88 QEYELRYKFPVARPVKVTSVVKKE-DTFVLTT------TAGYYYAKAIVSATGSYANPFIPDIPGSASFKGTVLHSSQYREPEDFSGKRVAIVGEGNSGAQILAEVSK---VASALWITRQPPEFLPDDIDGKYLFD 214
BLAST of mRNA_H-elongata_contig206031.5888.1 vs. uniprot
Match: A0A069I6L1_9BURK (Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Cupriavidus sp. SK-3 TaxID=1470558 RepID=A0A069I6L1_9BURK) HSP 1 Score: 114 bits (284), Expect = 1.140e-27 Identity = 71/134 (52.99%), Postives = 83/134 (61.94%), Query Frame = 1
Query: 7 YEEIMKLNVVRPVVVTGVTRTTMGTFLVDTDCLLGGSPNRWEARAVISAAGSHKSPDWPRLPGAETFKGVQIHSSQYRSAEDFRGARVAVVGSGNSGAQILAEVSQPGIAASTLWSTSEEPSFLPVGFSGKDIF 408
YEE L V RPVVV V R +V TD GS + ARAV+SA G+ + P WP PGA F GVQ+HS+ YRSA+ F G RV VVG GNSGAQILAEVSQ A T+W+T E P FLP G+ +F
Sbjct: 86 YEERYALPVKRPVVVQSVARDGER-MIVQTD---SGS---YAARAVVSATGTWRHPFWPHYPGAADFHGVQLHSAHYRSADAFAGKRVLVVGGGNSGAQILAEVSQ---VADTVWATKEPPLFLPDDVDGRVLF 209
BLAST of mRNA_H-elongata_contig206031.5888.1 vs. uniprot
Match: A0A246FI62_9BACT (Pyridine nucleotide-disulfide oxidoreductase n=2 Tax=Hymenobacter TaxID=89966 RepID=A0A246FI62_9BACT) HSP 1 Score: 112 bits (281), Expect = 3.790e-27 Identity = 67/140 (47.86%), Postives = 88/140 (62.86%), Query Frame = 1
Query: 4 EYEEIMKLNVVRPVVVTGVTRTT-----MGTFLVDTDCLLGGSPNRWEARAVISAAGSHKSPDWPRLPGAETFKGVQIHSSQYRSAEDFRGARVAVVGSGNSGAQILAEVSQPGIAASTLWSTSEEPSFLPVGFSGKDIF 408
+YE+ +L V RPV V V R++ +G+F+V+TD ++ARAV+ A GS ++P P+ PG F GVQ+HS+QY+ A F G RV VVGSGNSGAQ+LAEVSQ A T W T EEP FLP G+ +F
Sbjct: 93 QYEQRYELPVRRPVRVAAVRRSSSLSGSVGSFVVETDA------GTYQARAVVCATGSWRNPIVPQFPGQADFGGVQLHSAQYKQAAPFAGQRVLVVGSGNSGAQVLAEVSQ---VARTTWVTQEEPRFLPDDVDGRVLF 223
BLAST of mRNA_H-elongata_contig206031.5888.1 vs. uniprot
Match: UPI00159FD376 (NAD(P)/FAD-dependent oxidoreductase n=2 Tax=Hymenobacter terrestris TaxID=2748310 RepID=UPI00159FD376) HSP 1 Score: 112 bits (280), Expect = 5.300e-27 Identity = 66/138 (47.83%), Postives = 86/138 (62.32%), Query Frame = 1
Query: 1 EEYEEIMKLNVVRPVVVTGVTRTT--MGTFLVDTDCLLGGSPNRWEARAVISAAGSHKSPDWPRLPGAETFKGVQIHSSQYRSAEDFRGARVAVVGSGNSGAQILAEVSQPGIAASTLWSTSEEPSFLPVGFSGKDIF 408
++YE+ +L V RPV V V R++ +G F+V+TD W+ARAV+ A GS ++P P PG F GVQ+HS+QY+ A F G RV VVG GNSGAQ+LAEVSQ A T W T +EP FLP G+ +F
Sbjct: 92 KQYEQRYELPVRRPVRVAAVRRSSGSVGGFMVETDA------GTWQARAVVCATGSWRNPFVPVYPGQADFSGVQLHSAQYQQAAPFAGQRVLVVGGGNSGAQVLAEVSQ---VAHTTWVTEKEPRFLPDDVDGRVLF 220
BLAST of mRNA_H-elongata_contig206031.5888.1 vs. uniprot
Match: T5HZ18_RHOER (FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=13 Tax=Nocardiaceae TaxID=85025 RepID=T5HZ18_RHOER) HSP 1 Score: 110 bits (275), Expect = 3.060e-26 Identity = 66/135 (48.89%), Postives = 82/135 (60.74%), Query Frame = 1
Query: 7 YEEIMKLNVVRPVVVTGVTRTTMGTFLVDTDCLLGGSPNRWEARAVISAAGSHKSPDWPRLPGAETFKGVQIHSSQYRSAEDFRGARVAVVGSGNSGAQILAEVSQPGIAASTLWSTSEEPSFLPVGFSGKDIFD 411
YE L V RPV VT VTR+ G +LV++D + W ARAV++ G+ + P WP PG F G QIH++ YRS F G++VAVVG GNS AQI+AEVS A TLW TS EP FLP G+ +FD
Sbjct: 103 YETRYDLPVRRPVRVTSVTRSGDG-YLVESD------HSSWFARAVVNTTGTWRQPFWPIYPGIREFTGTQIHTTSYRSPTPFAGSKVAVVGGGNSAAQIVAEVST---VAETLWLTSREPRFLPDDVDGRILFD 227
BLAST of mRNA_H-elongata_contig206031.5888.1 vs. uniprot
Match: A0A373FQ04_COMTE (NAD(P)/FAD-dependent oxidoreductase n=2 Tax=Comamonas TaxID=283 RepID=A0A373FQ04_COMTE) HSP 1 Score: 110 bits (274), Expect = 3.110e-26 Identity = 67/136 (49.26%), Postives = 87/136 (63.97%), Query Frame = 1
Query: 4 EYEEIMKLNVVRPVVVTGVTRTTMGTFLVDTDCLLGGSPNRWEARAVISAAGSHKSPDWPRLPGAETFKGVQIHSSQYRSAEDFRGARVAVVGSGNSGAQILAEVSQPGIAASTLWSTSEEPSFLPVGFSGKDIFD 411
+YE + N+ RPV VTG+ T F V+ GG RW ARAV+ A G+ ++P P + GA +FKG Q+HS+QY S+E F+G RV VVG GNSGAQILAEVS +A ST W T E P+FLP G+ +F+
Sbjct: 84 KYEARYQFNIERPVRVTGIESTEQ-VFQVNA----GG--RRWYARAVVLATGTWRNPFVPEVEGAASFKGQQLHSAQYVSSEPFKGKRVMVVGGGNSGAQILAEVSL--VAQSTTWVTLEPPAFLPDEVDGRVLFE 210
BLAST of mRNA_H-elongata_contig206031.5888.1 vs. uniprot
Match: I6R3V7_RHIRD (FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=6 Tax=Hyphomicrobiales TaxID=356 RepID=I6R3V7_RHIRD) HSP 1 Score: 109 bits (273), Expect = 4.210e-26 Identity = 67/134 (50.00%), Postives = 81/134 (60.45%), Query Frame = 1
Query: 7 YEEIMKLNVVRPVVVTGVTRTTMGTFLVDTDCLLGGSPNRWEARAVISAAGSHKSPDWPRLPGAETFKGVQIHSSQYRSAEDFRGARVAVVGSGNSGAQILAEVSQPGIAASTLWSTSEEPSFLPVGFSGKDIF 408
YEE K + RP+VVT V R+ GT V D RW+ARAV+S G+ + P P PGA FKG QIHS+ Y SA++F G RVA+VG GNSGAQILAEVS A T+W T + P FLP G +F
Sbjct: 88 YEERYKFPIERPMVVTSV-RSVDGTLEVIAD------KGRWQARAVLSTTGTWRHPFIPAYPGAADFKGQQIHSANYVSADEFAGQRVAIVGGGNSGAQILAEVST---VAKTVWVTPQPPIFLPDDVDGHVLF 211
BLAST of mRNA_H-elongata_contig206031.5888.1 vs. uniprot
Match: UPI0005FBA2B2 (ArsO family NAD(P)H-dependent flavin-containing monooxygenase n=1 Tax=Pseudomonas TaxID=286 RepID=UPI0005FBA2B2) HSP 1 Score: 109 bits (273), Expect = 5.040e-26 Identity = 66/136 (48.53%), Postives = 80/136 (58.82%), Query Frame = 1
Query: 4 EYEEIMKLNVVRPVVVTGVTRTTMGTFLVDTDCLLGGSPNRWEARAVISAAGSHKSPDWPRLPGAETFKGVQIHSSQYRSAEDFRGARVAVVGSGNSGAQILAEVSQPGIAASTLWSTSEEPSFLPVGFSGKDIFD 411
+YE +VRPV V V RT G + D WEARA+ISA GS +P P PGA F GVQ+HS+ Y+S E FRG RV VVG GNSGAQI AEVS+ A + W T EEP+FLP G+ +F+
Sbjct: 88 QYEGRYDFPIVRPVHVIAVERTHRGMRVRAND-------REWEARAIISATGSWGNPYLPAYPGAALFNGVQVHSAHYQSPETFRGLRVLVVGGGNSGAQIHAEVSE---VADSTWVTLEEPAFLPDEVDGRVLFE 213
BLAST of mRNA_H-elongata_contig206031.5888.1 vs. uniprot
Match: A0A5A7MFQ0_COMTE (Monooxygenase n=24 Tax=Comamonas TaxID=283 RepID=A0A5A7MFQ0_COMTE) HSP 1 Score: 109 bits (272), Expect = 6.350e-26 Identity = 64/136 (47.06%), Postives = 85/136 (62.50%), Query Frame = 1
Query: 4 EYEEIMKLNVVRPVVVTGVTRTTMGTFLVDTDCLLGGSPNRWEARAVISAAGSHKSPDWPRLPGAETFKGVQIHSSQYRSAEDFRGARVAVVGSGNSGAQILAEVSQPGIAASTLWSTSEEPSFLPVGFSGKDIFD 411
+YEE +L + RPV VTG+ T G F V+ W++RAV+ A G+ ++P P + G +FKG Q+HS+QY S E F+G RV VVG GNSGAQILAEVS +A ST W T E P+FLP G+ +F+
Sbjct: 84 KYEERYELKIERPVRVTGIESTEQG-FQVN------AGARSWQSRAVVFATGTWRNPFVPNVEGLTSFKGQQLHSAQYVSPEPFKGKRVMVVGGGNSGAQILAEVSL--VAQSTTWVTLEPPAFLPDEVDGRVLFE 210 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig206031.5888.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig206031.5888.1 >prot_H-elongata_contig206031.5888.1 ID=prot_H-elongata_contig206031.5888.1|Name=mRNA_H-elongata_contig206031.5888.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=132bp MKLNVVRPVVVTGVTRTTMGTFLVDTDCLLGGSPNRWEARAVISAAGSHKback to top mRNA from alignment at H-elongata_contig206031:2..832+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig206031.5888.1 ID=mRNA_H-elongata_contig206031.5888.1|Name=mRNA_H-elongata_contig206031.5888.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=831bp|location=Sequence derived from alignment at H-elongata_contig206031:2..832+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig206031:2..832+ >mRNA_H-elongata_contig206031.5888.1 ID=mRNA_H-elongata_contig206031.5888.1|Name=mRNA_H-elongata_contig206031.5888.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=792bp|location=Sequence derived from alignment at H-elongata_contig206031:2..832+ (Himanthalia elongata Himel1 dioecious)back to top |