mRNA_H-elongata_contig20522.5852.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig20522.5852.1
Unique NamemRNA_H-elongata_contig20522.5852.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig20522.5852.1 vs. uniprot
Match: A0A6H5K2N6_9PHAE (GRIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2N6_9PHAE)

HSP 1 Score: 444 bits (1143), Expect = 5.450e-132
Identity = 411/856 (48.01%), Postives = 488/856 (57.01%), Query Frame = 1 
Query:    1 VFKRWRLAFLEGRQGSIKRESEENRGRAKSFEGLVQRLSEELERQGEVVNRHAEVIRHRGFELEAALDRASRAHDELIAMEPPSLAQAIGSMEILLR---------------------------------DVWCLVRYEKLSSKKRGVGSKGKEASPRPPEENEEAGRKADESTLEDSEHTEEEEVDIGGTEQTLIASMENVGERDQPAVVE----------VMSTVAKREGQGEQGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLTAGSWDSEGRLSTLLPPATAASVAGENTVVVIEWRTQEEVDEWFAIRLAAAMEQEDKLEEEQRRSGEKRDAEGEPV-----TTAVEAASLVAPR-LLPVLDTPATIQESFATEMARLEAKLNSKLEEARAELNRNTEAYKQYRARAHTAIKNSGASQREAEARITQMRKELATERELVRKALEERAAVEARWAEESADLKQRITELEALVESAAARCKELEAGIASSVEEGVKAARDETAAANGRLEEQKTATDEARGALARANTELDKARRELKQRGQLARNLLAEKDAEISRLRSGGRGRNGGGLIAGETASNVNNGNAFGFQQKAVEGKTPFVSVDGVSSSSSPLIIPPMGDSTRDNTGQGHTSPDPLADPFAVGYSSPNSVQGGTVKDRTPPVSFPDSFGADRKRFQSGGDVGGPQXXXXXXXXXXXXX--------------AEQQILQMARIQAQRDEEMGRLRVKLQRQSEEIRAREERLATRDQEKERLKEQVGELEAEATRSKELLDQEHGPEKMTYLKNVVKKFVVSEGNERHRLVPVLATILSFSPAELNEVDRAVASATSGGGSSWGSVFG 2379
            VF+RWRLAFLEGRQG++K ESEENRG+A+S+E LVQRLSEELERQGEVVNR+A ++  R  +L+AALDRA+RAHDELI+MEPPSL+QA+  ++ILLR                                  VWCLVRY   S                                              GGT +  ++S  N    DQP   E                 ++       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                             TV V+EWRTQE+VDEWFA ++A A+E  D   E+          +G P      TT V A + VA   +LPVL+TP T+Q+SF  E++R+   L +KLEEARAEL RNTEAYKQYRARAHTAIKNSGASQR+ EARI Q  KELA E+E +R+A E+R A EARWAEESA LKQ+I ELEA V++AAAR  E+EA IA SVEEGV+AA++ETA A    EE   A  E R ALA A ++LDK +RELKQRGQLARNLLAEKDAEI+RLRSG     GGGL+           N  G    A  G      VDG + SS                                                                           XXXXXXXXXXXXX              AEQQILQMAR+QAQRDEE GRLRVK++R ++EIRAREE LA   +EKE L+++V +L+ EA R+KELLD   GPEKMTYLKNVVK+FV+S+G ER RLVPV+ATILSFSPAE +EV +AVA+A +GG +SWGSVFG
Sbjct: 2371 VFQRWRLAFLEGRQGTMKSESEENRGKAESYESLVQRLSEELERQGEVVNRYASLLLEREEQLDAALDRAARAHDELISMEPPSLSQAVDGVKILLRVSTTAAAGEQSAVTGDDAPAAAVAAGGEADAAPQVWCLVRYAIASXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXGGTPRGNVSSSGN----DQPVEGEEXXXXXXXXXXXXXXXXQKDAPATDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVEVVEWRTQEDVDEWFAAQVARAIEVAD---EQXXXXXXXXXVDGGPAAGAMDTTVVNAQAPVAVAPVLPVLETPMTLQQSFGAELSRVRGDLEAKLEEARAELTRNTEAYKQYRARAHTAIKNSGASQRDTEARIAQAHKELAAEQEAMRRAHEDRTAAEARWAEESAVLKQQIAELEARVKTAAARTAEVEANIAGSVEEGVRAAKEETAEARRLEEEGAKAXGELREALAAARSDLDKTKRELKQRGQLARNLLAEKDAEINRLRSG---EAGGGLMHLHA-------NGDGGAVGAASGSA----VDGTALSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEQQILQMARVQAQRDEETGRLRVKIKRLADEIRAREEELAAXXEEKEGLRKRVEDLQGEAARAKELLDDATGPEKMTYLKNVVKRFVMSDGTERQRLVPVVATILSFSPAETSEVGKAVAAAAAGGATSWGSVFG 3199
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BLAST of mRNA_H-elongata_contig20522.5852.1 vs. uniprot
Match: D8LEJ5_ECTSI (GRIP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEJ5_ECTSI)

HSP 1 Score: 392 bits (1007), Expect = 5.030e-114
Identity = 358/842 (42.52%), Postives = 442/842 (52.49%), Query Frame = 1 
Query:    1 VFKRWRLAFLEGRQGSIKRESEENRGRAKSFEGLVQRLSEELERQGEVVNRHAEVIRHRGFELEAALDRASRAHDELIAMEPPSLAQAIGSMEILLRDVWCLVRYEKLSSKK-----------------------------------------RGVGSKGKEASPRPPEENEEAGRKADESTLEDSEHTEEEEVDIGGTEQTLIASMENVGERDQPAVVEVMSTVAKREG-QGEQGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLTAGSWDSEGRLSTLLPPATAASVAGENTVVVIEWRTQEEVDEWFAIRLAAAMEQEDKLEEEQRRSGEKRDAEGEPVTTAVEAASL-------VAPRLLPVLDTPATIQESFATEMARLEAKLNSKLEEARAELNRNTEAYKQYRARAHTAIKNSGASQREAEARITQMRKELATERELVRKALEERAAVEARWAEESADLKQRITELEALVESAAARCKELEAGIASSVEEGVKAARDETAAANGRLEEQKTATDEARGALARANTELDKARRELKQRGQLARNLLAEKDAEISRLRSGGRGRNGGGLIAGETASNVNNGNAFGFQQKAVEGKTPFVSVDGVSSSSSPLIIPPMGDSTRDNTGQGHTSPDPLADPFAVGYSSPNSVQGGTVKDRTPPVSFPDSFGADRKRFQSGGDVGGPQXXXXXXXXXXXXXAEQQILQMARIQAQRDEEMGRLRVKLQRQSEEIRAREERLATRDQEKERLKEQVGELEAEATRSKELLDQEHGPEKMTYLKNVVKKFVVSEGNERHRLVPVLATILSFSPAELNEVDRAVASATSGGGSSWGSVFG 2379
            VF+RWRLAFLEGRQG++K ESEENRG+A+S+E LVQRLSEELERQGE VNRHA ++  R  +L+AALDRA+RAHDELI+MEPPSL+Q           VWCLVRY   SS                                           RG  S  ++  P   EE E+    +  ++   S++      D   T+     S E+          ++ S    REG +G++                 XXXXXXXXXXXXXXXXXX +  G+ D +                  +TV V+EWRTQE+VDEWFA+++A A+E     EE+Q+ +      +G P   A++A ++       VAP +LPVL+TP T+Q+SF  E++R+   L  KLEEARAEL RNTEAYKQYRARAHTAIKNSGASQR+ EARI Q  KEL+ E+E +RKA E+R A EARWAEESA LKQ+I+ELEA VE+AAAR  E+EA IA SVEEGV+AA++ETA A  RLEE         GA                                                                                                                    A G                                              XXXXXXXXXAEQQILQMAR+QAQRDEE GRLRV +QR ++EIRAREE LA RD EKE L+++V +L+ EA R+KELLD   GPEKMTYLKNVVK+FV+S+G ER RLVPV+ATILSFSPAE +EV +AVA+A +GG +SWGSVFG
Sbjct: 2228 VFQRWRLAFLEGRQGAMKSESEENRGKAESYESLVQRLSEELERQGEAVNRHASLLLEREEQLDAALDRAARAHDELISMEPPSLSQ-----------VWCLVRYAIASSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETGDTPRGNVSSSRDDQPMEGEEGEQQPAASAPASXXQSQN------DAPATDDGAAVSAEDA---------QLSSNHPVREGAKGDES---------------GXXXXXXXXXXXXXXXXXXXVANGNNDKD------------------DTVEVVEWRTQEDVDEWFAVQVARAIEV---AEEQQQAASLGGGVDGGPSAGAMDATAVNAQAPVAVAP-VLPVLETPMTLQQSFGAELSRVRGDLEGKLEEARAELTRNTEAYKQYRARAHTAIKNSGASQRDTEARIAQAHKELSAEQEAMRKAHEDRTAAEARWAEESAALKQQISELEARVETAAARTAEVEANIAGSVEEGVRAAKEETAEAR-RLEEX--------GAK-------------------------------------------------------------------------------------------------------------------AXGXXXXXXXXXXXXXXXXXXXXX-------------------------XXXXXXXXXAEQQILQMARVQAQRDEETGRLRVNIQRLADEIRAREEELAARDDEKEELRKRVEDLQGEAARAKELLDDATGPEKMTYLKNVVKRFVMSDGTERQRLVPVVATILSFSPAETSEVGKAVAAAAAGGATSWGSVFG 2857
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BLAST of mRNA_H-elongata_contig20522.5852.1 vs. uniprot
Match: A0A835ZGA7_9STRA (GRIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGA7_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.360e-10
Identity = 63/129 (48.84%), Postives = 77/129 (59.69%), Query Frame = 1 
Query: 1972 AEQQILQMARIQAQRDEEMGRLRV-------KLQRQSEEIRAREERLATRDQEKERLKEQVGELEAEATRSKELLDQEHGPEKMTYLKNVVKKFVVSEGNERHRLVPVLATILSFSPAELNEVDRAVAS 2337
            AEQQILQ AR QAQRDEE  RLR        +LQ + +EI ARE  L  R+ E       V +L+    R  +LL Q+   +K+TYLKNVV KF+V + + R RLVPVLATIL  S  E   V  +VAS
Sbjct: 2375 AEQQILQAARAQAQRDEEGNRLRGLVKELRDRLQTKDKEIAAREAALRIRESE-------VEDLKRSRAREGDLLGQDSA-DKLTYLKNVVLKFLVCDQHGRERLVPVLATILRLSELEAASVRASVAS 2495
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BLAST of mRNA_H-elongata_contig20522.5852.1 vs. uniprot
Match: UPI001F5D44E6 (protein GRIP n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5D44E6)

HSP 1 Score: 63.5 bits (153), Expect = 1.470e-6
Identity = 62/147 (42.18%), Postives = 88/147 (59.86%), Query Frame = 1 
Query: 1972 AEQQILQMARIQAQRDEEMGRLR---VKLQRQSEEIRAREERLATRDQEKERLKEQVGELEAEATRSKELLDQEHGPEKMTYLKNVVKKFVVSEGNERHRLVPVLATILSFSPAELNEVDRAV--------ASATSGGGSSWGSVFG 2379
            AEQQIL +AR QAQR+EE+G+ +   + LQ++ EE+  RE RL   DQ++  LK ++  +  E ++ +E +D       MTYLKNV+ K +  E  E   L+PV+AT+L FSP ELN+    V        A+A S GGS+  S FG
Sbjct:  785 AEQQILLLARQQAQREEELGQSQRHILALQQEIEEL-ERENRL--HDQQQAMLKTELRNM--ERSQKREGID-------MTYLKNVILKLL--ETGEVGALLPVVATLLQFSPDELNKCQHGVLSTVASSPATALSDGGSTPNSFFG 917
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BLAST of mRNA_H-elongata_contig20522.5852.1 vs. uniprot
Match: A0A0Q3GZM2_BRADI (GRIP domain-containing protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=A0A0Q3GZM2_BRADI)

HSP 1 Score: 60.5 bits (145), Expect = 1.110e-5
Identity = 61/147 (41.50%), Postives = 87/147 (59.18%), Query Frame = 1 
Query: 1972 AEQQILQMARIQAQRDEEMGRLR---VKLQRQSEEIRAREERLATRDQEKERLKEQVGELEAEATRSKELLDQEHGPEKMTYLKNVVKKFVVSEGNERHRLVPVLATILSFSPAELNEVDRAV--------ASATSGGGSSWGSVFG 2379
            AEQQIL +AR QAQR+EE+G+ +   + LQ++ EE+  RE RL   DQ++  LK ++  +  E ++ +E +D       MTYLKNV+ K +  E  E   L+PV+AT+L FSP ELN+    V        A+A   GGS+  S FG
Sbjct:  507 AEQQILLLARQQAQREEELGQSQRHILALQQEIEEL-ERENRL--HDQQEAILKTELRNM--ERSQKREGID-------MTYLKNVILKLL--ETGEVGALLPVVATLLQFSPDELNKCQNGVLSNVASSPATALLDGGSTPNSFFG 639
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BLAST of mRNA_H-elongata_contig20522.5852.1 vs. uniprot
Match: I1GUL1_BRADI (GRIP domain-containing protein n=2 Tax=Brachypodium distachyon TaxID=15368 RepID=I1GUL1_BRADI)

HSP 1 Score: 60.5 bits (145), Expect = 1.270e-5
Identity = 61/147 (41.50%), Postives = 87/147 (59.18%), Query Frame = 1 
Query: 1972 AEQQILQMARIQAQRDEEMGRLR---VKLQRQSEEIRAREERLATRDQEKERLKEQVGELEAEATRSKELLDQEHGPEKMTYLKNVVKKFVVSEGNERHRLVPVLATILSFSPAELNEVDRAV--------ASATSGGGSSWGSVFG 2379
            AEQQIL +AR QAQR+EE+G+ +   + LQ++ EE+  RE RL   DQ++  LK ++  +  E ++ +E +D       MTYLKNV+ K +  E  E   L+PV+AT+L FSP ELN+    V        A+A   GGS+  S FG
Sbjct:  718 AEQQILLLARQQAQREEELGQSQRHILALQQEIEEL-ERENRL--HDQQEAILKTELRNM--ERSQKREGID-------MTYLKNVILKLL--ETGEVGALLPVVATLLQFSPDELNKCQNGVLSNVASSPATALLDGGSTPNSFFG 850
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20522.5852.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5K2N6_9PHAE5.450e-13248.01GRIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LEJ5_ECTSI5.030e-11442.52GRIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835ZGA7_9STRA1.360e-1048.84GRIP domain-containing protein n=1 Tax=Tribonema m... [more]
UPI001F5D44E61.470e-642.18protein GRIP n=1 Tax=Lolium rigidum TaxID=89674 Re... [more]
A0A0Q3GZM2_BRADI1.110e-541.50GRIP domain-containing protein n=1 Tax=Brachypodiu... [more]
I1GUL1_BRADI1.270e-541.50GRIP domain-containing protein n=2 Tax=Brachypodiu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20522contigH-elongata_contig20522:3084..6877 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score62.8
Seed ortholog evalue8.5e-07
Seed eggNOG ortholog15368.BRADI1G28167.1
GOsGO:0000003,GO:0000228,GO:0000280,GO:0000793,GO:0000794,GO:0000795,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005794,GO:0005802,GO:0006139,GO:0006259,GO:0006310,GO:0006725,GO:0006807,GO:0006810,GO:0006996,GO:0007049,GO:0007127,GO:0007131,GO:0008150,GO:0008152,GO:0009987,GO:0012505,GO:0016043,GO:0016192,GO:0022402,GO:0022414,GO:0031974,GO:0031981,GO:0031984,GO:0034641,GO:0035825,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044431,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0046483,GO:0048193,GO:0048285,GO:0051179,GO:0051234,GO:0051321,GO:0061982,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0098791,GO:0099086,GO:0140013,GO:1901360,GO:1903046
EggNOG free text desc.atgrip,grip
EggNOG OGs28MCD@1,2QTVU@2759,37IZ5@33090,3GCAF@35493,3I9HN@38820,3KS5Y@4447
COG Functional cat.S
Best tax levelPoales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-21_004410.1
Exons5
Model size2388
Cds size2388
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20522.5852.1prot_H-elongata_contig20522.5852.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig20522 3084..6877 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930150.1009398-CDS-H-elongata_contig20522:3083..42141622930150.1009398-CDS-H-elongata_contig20522:3083..4214Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20522 3084..4214 -
1691679300.1271222-CDS-H-elongata_contig20522:3083..42141691679300.1271222-CDS-H-elongata_contig20522:3083..4214Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20522 3084..4214 -
1622930150.1188786-CDS-H-elongata_contig20522:4632..47821622930150.1188786-CDS-H-elongata_contig20522:4632..4782Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20522 4633..4782 -
1691679300.139108-CDS-H-elongata_contig20522:4632..47821691679300.139108-CDS-H-elongata_contig20522:4632..4782Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20522 4633..4782 -
1622930150.1329153-CDS-H-elongata_contig20522:5094..59101622930150.1329153-CDS-H-elongata_contig20522:5094..5910Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20522 5095..5910 -
1691679300.148955-CDS-H-elongata_contig20522:5094..59101691679300.148955-CDS-H-elongata_contig20522:5094..5910Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20522 5095..5910 -
1622930150.146744-CDS-H-elongata_contig20522:6066..62611622930150.146744-CDS-H-elongata_contig20522:6066..6261Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20522 6067..6261 -
1691679300.1592467-CDS-H-elongata_contig20522:6066..62611691679300.1592467-CDS-H-elongata_contig20522:6066..6261Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20522 6067..6261 -
1622930150.160861-CDS-H-elongata_contig20522:6781..68771622930150.160861-CDS-H-elongata_contig20522:6781..6877Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20522 6782..6877 -
1691679300.1695213-CDS-H-elongata_contig20522:6781..68771691679300.1695213-CDS-H-elongata_contig20522:6781..6877Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20522 6782..6877 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig20522.5852.1

>prot_H-elongata_contig20522.5852.1 ID=prot_H-elongata_contig20522.5852.1|Name=mRNA_H-elongata_contig20522.5852.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=796bp
VFKRWRLAFLEGRQGSIKRESEENRGRAKSFEGLVQRLSEELERQGEVVN
RHAEVIRHRGFELEAALDRASRAHDELIAMEPPSLAQAIGSMEILLRDVW
CLVRYEKLSSKKRGVGSKGKEASPRPPEENEEAGRKADESTLEDSEHTEE
EEVDIGGTEQTLIASMENVGERDQPAVVEVMSTVAKREGQGEQGEREGEA
EAARVPLPMSPPSSAENESGSDAAAAAVTLTAGSWDSEGRLSTLLPPATA
ASVAGENTVVVIEWRTQEEVDEWFAIRLAAAMEQEDKLEEEQRRSGEKRD
AEGEPVTTAVEAASLVAPRLLPVLDTPATIQESFATEMARLEAKLNSKLE
EARAELNRNTEAYKQYRARAHTAIKNSGASQREAEARITQMRKELATERE
LVRKALEERAAVEARWAEESADLKQRITELEALVESAAARCKELEAGIAS
SVEEGVKAARDETAAANGRLEEQKTATDEARGALARANTELDKARRELKQ
RGQLARNLLAEKDAEISRLRSGGRGRNGGGLIAGETASNVNNGNAFGFQQ
KAVEGKTPFVSVDGVSSSSSPLIIPPMGDSTRDNTGQGHTSPDPLADPFA
VGYSSPNSVQGGTVKDRTPPVSFPDSFGADRKRFQSGGDVGGPQQQQQQQ
TAADSHHAEQQILQMARIQAQRDEEMGRLRVKLQRQSEEIRAREERLATR
DQEKERLKEQVGELEAEATRSKELLDQEHGPEKMTYLKNVVKKFVVSEGN
ERHRLVPVLATILSFSPAELNEVDRAVASATSGGGSSWGSVFGSM*
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mRNA from alignment at H-elongata_contig20522:3084..6877-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig20522.5852.1 ID=mRNA_H-elongata_contig20522.5852.1|Name=mRNA_H-elongata_contig20522.5852.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3794bp|location=Sequence derived from alignment at H-elongata_contig20522:3084..6877- (Himanthalia elongata Himel1 dioecious)
GTCTTCAAGAGATGGAGGCTTGCGTTTTTGGAGGGGAGGCAGGGGAGCAT
CAAGCGCGAGTCCGAGGAAAACCGCGGGAGGGCCAAAAGTTTCGAGGTCA
GCACGATACAGTACATTGATTTAGTTCTCCCCTGTGTTGGTTTTGTGTTT
TTTACTAATGTCTGTAATCGTGGGTTGTCCTGCTTCGATAGGAATATCAA
CCTGAGCGTCGCAGTTGGGATCAATATGGATACATATGCCTAGATATCAG
GGATCTGTGGATATGTAGAAGCAGGAGGTTTTTTTTCCGTGGCCAGCTGG
GGGGAAAGGGTGGAGTCTAGAAATATTAGAGTTATTGCAACCGTAAGGGA
TCGATTTCGACGACAATGTTTCGAGAAGACGTGCCTCCTCTTCATCGAAA
TAATATTATTCTTGTTCATCCGCAGGCGTTATAGTGTATTATATTATGTC
TGCACTGTAGCGACCGCAGATGTCGATGGTGACGGGCGTAAAGCTGCCGC
ACAACATGAATCGCGGTTTTCGGAGGAGTTTATCCTCACGGCCCCTGATT
TATTTTAATTATATTTGACGGGGGGTTTTTGTGAAACCACCGTGCGCGAA
TAACGGGGGAGCGCAGGGTCTAGTTCAGCGACTGAGCGAGGAGCTGGAGC
GTCAGGGGGAGGTCGTGAACCGCCACGCAGAGGTGATCCGCCACCGAGGA
TTCGAGCTCGAGGCCGCCCTCGACCGTGCCAGCCGTGCGCACGACGAACT
GATTGCCATGGAGCCCCCGAGCCTGGCGCAGGCGATCGGCAGCATGGAGA
TTCTGCTGAGGGTTTCCACGGAATCGGCGTCGTCGATGGTTGCGGCGGCG
GGAGGCGAAACCATGGAGGAGGGCCCGGAAATAATAGAAGAAAAAGGTGA
AGTCGTCGAAGAGGGCGATGAAACGACCGAGGGCAGCTGTGGCGTACAAG
GAAAAGAGTTGCAGAAGGACGTGTGGTGTCTCGTTCGGTACGAGAAGCTA
TCTTCGAAAAAGCGCGGCGTGGGTTCGAAGGGGAAAGAGGCGTCGCCGCG
ACCGCCCGAGGAGAATGAAGAAGCCGGTCGGAAGGCTGACGAGAGCACTC
TCGAAGACAGCGAACACACGGAAGAGGAGGAAGTAGACATTGGAGGCACG
GAGCAGACTTTGATCGCGTCGATGGAGAATGTCGGTGAGCGAGATCAGCC
AGCGGTTGTCGAGGTGATGTCGACTGTGGCAAAGAGGGAAGGTCAAGGGG
AGCAGGGCGAAAGGGAAGGAGAAGCGGAAGCAGCCCGCGTTCCGCTCCCA
ATGTCTCCTCCATCCAGCGCAGAGAACGAAAGTGGTAGCGATGCGGCGGC
GGCGGCGGTGACCCTGACTGCGGGAAGTTGGGATTCAGAGGGTCGGTTAT
CGACCCTTCTCCCACCCGCGACGGCGGCTTCTGTCGCCGGAGAGAACACC
GTCGTTGTGATCGAATGGCGGACGCAGGAAGAGGTGGACGAGTGGTTCGC
CATTCGGCTGGCGGCTGCGATGGAGCAAGAAGACAAGCTAGAGGAAGAGC
AGAGGCGGAGTGGAGAGAAAAGAGATGCGGAGGGTGAACCCGTCACGACG
GCGGTGGAAGCAGCTTCGTTGGTAGCACCGCGGCTGTTGCCGGTGTTGGA
CACTCCGGCCACCATCCAGGAGTCTTTCGCCACCGAGATGGCCCGACTCG
AGGCAAAGCTGAACAGCAAGCTGGAAGAGGCACGGGCGGAGCTCAACAGG
AACACGGAGGCGTACAAGCAGTATCGCGCTAGGGTAAGCAATGGGTTTCG
TTTAAATACCCGGTAGGCGTTCCCGAAGCGGAGAAAAGGGGTGCGTATGA
GACTGGGGGCCGGAGGCGCCTGTCGGAGGTGATATAGCGCGCGACTTGTG
TTCAATTTTTTTTTTCCGGTACATTTCCTCGGTTCTGGTGGAACCTTATC
AGCTTTCCGCCCACCCCCTCCCTCATCCTGTTAATAGTGAATTTGAACGC
TTTTGCTGGTGGCACTCTCCGCACCCATTCTAATCTTTAAGTGTTTACAT
GGCTTGCCTGTTGGTGTATGTTTTTCTCGGCTTTGACTCCGACAGGCGCA
CACGGCCATAAAAAACAGCGGAGCCTCGCAGCGCGAGGCGGAGGCGCGGA
TCACCCAGATGCGCAAGGAGCTCGCGACGGAGCGCGAGCTGGTGCGCAAG
GCCCTCGAAGAACGCGCAGCGGTGGAGGCTCGCTGGGCAGAGGAGGTTAG
AAAAAAAAAGGATAATAACTTTTGACGTGGTATCCTAGCGGACATAGACC
ACGCATCCCAACATTGGCGTGATGGTAACAGCGTTTATTCATAATACTCG
ACTTTGATATAATACACCGCGCATGCAATGGTTATAATTGGACAAACCGG
GTACGGTAACCTAGTGTTGCACATTCAGCAGGCGTTATCGTTATCGGCTA
TTCTCCCAAGTACCGCAAAGGAATGTACACCTCCACACTGTCCATAACAA
GATGAGGCATTCTAGATGGTGAGATGTATGACACCCCATCCAGAACTGGA
TAGAAGATACACCCGTGGCTACATCCTATTTCAATTTGACAACAACCCTC
CGCCCCCTTTTCCCCCTCCTCTCTACCATGCCATCTTCTCGGAAATAACG
CGACGAAATGCAGTCAGCGGATTTGAAGCAGCGCATTACAGAACTGGAGG
CGCTCGTCGAATCCGCCGCGGCGCGGTGCAAGGAGCTGGAAGCCGGCATT
GCTAGCTCTGTCGAGGAGGGGGTCAAGGCTGCCAGGGACGAGACGGCGGC
GGCCAACGGGCGCTTGGAGGAGCAAAAGACGGCAACCGACGAGGCCAGGG
GAGCTCTCGCGAGGGCCAACACCGAGCTTGACAAGGCTCGCCGAGAGCTC
AAGCAGAGGGGCCAGCTCGCGCGCAACCTCCTCGCCGAAAAGGACGCCGA
GATCAGCCGCCTGAGATCGGGTGGCCGCGGTCGTAATGGCGGTGGCCTTA
TCGCGGGAGAAACCGCTTCCAACGTAAATAATGGCAATGCGTTTGGCTTC
CAGCAGAAAGCGGTAGAGGGGAAGACGCCATTTGTCTCCGTCGATGGCGT
TTCGTCATCGTCGTCGCCGCTGATAATTCCCCCCATGGGAGACAGCACCA
GAGACAACACCGGGCAGGGTCATACGTCGCCCGATCCTCTCGCCGACCCC
TTCGCGGTCGGGTATTCTTCTCCCAATAGTGTTCAAGGCGGGACTGTCAA
GGACAGAACGCCGCCGGTTAGTTTTCCAGACAGTTTTGGCGCCGACCGAA
AGCGATTCCAGAGCGGCGGCGATGTGGGGGGCCCGCAGCAGCAACAACAA
CAGCAGACCGCCGCGGATTCCCACCACGCGGAGCAACAGATCCTCCAGAT
GGCCAGGATACAGGCGCAGCGCGATGAGGAGATGGGCAGGCTGCGCGTGA
AACTCCAGCGGCAATCGGAGGAAATCCGGGCCCGAGAGGAACGCCTGGCG
ACGCGGGACCAAGAGAAGGAGAGGCTAAAGGAGCAGGTGGGGGAGCTGGA
GGCGGAGGCGACGAGGTCGAAGGAGCTGCTGGACCAAGAGCACGGACCCG
AAAAGATGACCTACCTGAAGAACGTGGTGAAGAAGTTCGTCGTGAGCGAG
GGGAACGAGCGGCACCGCCTGGTGCCGGTTCTCGCGACCATCCTGAGCTT
CAGCCCGGCGGAGCTGAACGAGGTGGACAGGGCGGTCGCATCTGCCACTA
GCGGGGGGGGGAGCTCCTGGGGGTCTGTTTTTGGTTCCATGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig20522:3084..6877-

>mRNA_H-elongata_contig20522.5852.1 ID=mRNA_H-elongata_contig20522.5852.1|Name=mRNA_H-elongata_contig20522.5852.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4776bp|location=Sequence derived from alignment at H-elongata_contig20522:3084..6877- (Himanthalia elongata Himel1 dioecious)
GTCTTCAAGAGATGGAGGCTTGCGTTTTTGGAGGGGAGGCAGGGGAGCAT
CAAGCGCGAGTCCGAGGAAAACCGCGGGAGGGCCAAAAGTTTCGAGGTCT
TCAAGAGATGGAGGCTTGCGTTTTTGGAGGGGAGGCAGGGGAGCATCAAG
CGCGAGTCCGAGGAAAACCGCGGGAGGGCCAAAAGTTTCGAGGGTCTAGT
TCAGCGACTGAGCGAGGAGCTGGAGCGTCAGGGGGAGGTCGTGAACCGCC
ACGCAGAGGTGATCCGCCACCGAGGATTCGAGCTCGAGGCCGCCCTCGAC
CGTGCCAGCCGTGCGCACGACGAACTGATTGCCATGGAGCCCCCGAGCCT
GGCGCAGGCGATCGGCAGCATGGAGATTCTGCTGAGGGGTCTAGTTCAGC
GACTGAGCGAGGAGCTGGAGCGTCAGGGGGAGGTCGTGAACCGCCACGCA
GAGGTGATCCGCCACCGAGGATTCGAGCTCGAGGCCGCCCTCGACCGTGC
CAGCCGTGCGCACGACGAACTGATTGCCATGGAGCCCCCGAGCCTGGCGC
AGGCGATCGGCAGCATGGAGATTCTGCTGAGGGACGTGTGGTGTCTCGTT
CGGTACGAGAAGCTATCTTCGAAAAAGCGCGGCGTGGGTTCGAAGGGGAA
AGAGGCGTCGCCGCGACCGCCCGAGGAGAATGAAGAAGCCGGTCGGAAGG
CTGACGAGAGCACTCTCGAAGACAGCGAACACACGGAAGAGGAGGAAGTA
GACATTGGAGGCACGGAGCAGACTTTGATCGCGTCGATGGAGAATGTCGG
TGAGCGAGATCAGCCAGCGGTTGTCGAGGTGATGTCGACTGTGGCAAAGA
GGGAAGGTCAAGGGGAGCAGGGCGAAAGGGAAGGAGAAGCGGAAGCAGCC
CGCGTTCCGCTCCCAATGTCTCCTCCATCCAGCGCAGAGAACGAAAGTGG
TAGCGATGCGGCGGCGGCGGCGGTGACCCTGACTGCGGGAAGTTGGGATT
CAGAGGGTCGGTTATCGACCCTTCTCCCACCCGCGACGGCGGCTTCTGTC
GCCGGAGAGAACACCGTCGTTGTGATCGAATGGCGGACGCAGGAAGAGGT
GGACGAGTGGTTCGCCATTCGGCTGGCGGCTGCGATGGAGCAAGAAGACA
AGCTAGAGGAAGAGCAGAGGCGGAGTGGAGAGAAAAGAGATGCGGAGGGT
GAACCCGTCACGACGGCGGTGGAAGCAGCTTCGTTGGTAGCACCGCGGCT
GTTGCCGGTGTTGGACACTCCGGCCACCATCCAGGAGTCTTTCGCCACCG
AGATGGCCCGACTCGAGGCAAAGCTGAACAGCAAGCTGGAAGAGGCACGG
GCGGAGCTCAACAGGAACACGGAGGCGTACAAGCAGTATCGCGCTAGGGA
CGTGTGGTGTCTCGTTCGGTACGAGAAGCTATCTTCGAAAAAGCGCGGCG
TGGGTTCGAAGGGGAAAGAGGCGTCGCCGCGACCGCCCGAGGAGAATGAA
GAAGCCGGTCGGAAGGCTGACGAGAGCACTCTCGAAGACAGCGAACACAC
GGAAGAGGAGGAAGTAGACATTGGAGGCACGGAGCAGACTTTGATCGCGT
CGATGGAGAATGTCGGTGAGCGAGATCAGCCAGCGGTTGTCGAGGTGATG
TCGACTGTGGCAAAGAGGGAAGGTCAAGGGGAGCAGGGCGAAAGGGAAGG
AGAAGCGGAAGCAGCCCGCGTTCCGCTCCCAATGTCTCCTCCATCCAGCG
CAGAGAACGAAAGTGGTAGCGATGCGGCGGCGGCGGCGGTGACCCTGACT
GCGGGAAGTTGGGATTCAGAGGGTCGGTTATCGACCCTTCTCCCACCCGC
GACGGCGGCTTCTGTCGCCGGAGAGAACACCGTCGTTGTGATCGAATGGC
GGACGCAGGAAGAGGTGGACGAGTGGTTCGCCATTCGGCTGGCGGCTGCG
ATGGAGCAAGAAGACAAGCTAGAGGAAGAGCAGAGGCGGAGTGGAGAGAA
AAGAGATGCGGAGGGTGAACCCGTCACGACGGCGGTGGAAGCAGCTTCGT
TGGTAGCACCGCGGCTGTTGCCGGTGTTGGACACTCCGGCCACCATCCAG
GAGTCTTTCGCCACCGAGATGGCCCGACTCGAGGCAAAGCTGAACAGCAA
GCTGGAAGAGGCACGGGCGGAGCTCAACAGGAACACGGAGGCGTACAAGC
AGTATCGCGCTAGGGCGCACACGGCCATAAAAAACAGCGGAGCCTCGCAG
CGCGAGGCGGAGGCGCGGATCACCCAGATGCGCAAGGAGCTCGCGACGGA
GCGCGAGCTGGTGCGCAAGGCCCTCGAAGAACGCGCAGCGGTGGAGGCTC
GCTGGGCAGAGGAGGCGCACACGGCCATAAAAAACAGCGGAGCCTCGCAG
CGCGAGGCGGAGGCGCGGATCACCCAGATGCGCAAGGAGCTCGCGACGGA
GCGCGAGCTGGTGCGCAAGGCCCTCGAAGAACGCGCAGCGGTGGAGGCTC
GCTGGGCAGAGGAGTCAGCGGATTTGAAGCAGCGCATTACAGAACTGGAG
GCGCTCGTCGAATCCGCCGCGGCGCGGTGCAAGGAGCTGGAAGCCGGCAT
TGCTAGCTCTGTCGAGGAGGGGGTCAAGGCTGCCAGGGACGAGACGGCGG
CGGCCAACGGGCGCTTGGAGGAGCAAAAGACGGCAACCGACGAGGCCAGG
GGAGCTCTCGCGAGGGCCAACACCGAGCTTGACAAGGCTCGCCGAGAGCT
CAAGCAGAGGGGCCAGCTCGCGCGCAACCTCCTCGCCGAAAAGGACGCCG
AGATCAGCCGCCTGAGATCGGGTGGCCGCGGTCGTAATGGCGGTGGCCTT
ATCGCGGGAGAAACCGCTTCCAACGTAAATAATGGCAATGCGTTTGGCTT
CCAGCAGAAAGCGGTAGAGGGGAAGACGCCATTTGTCTCCGTCGATGGCG
TTTCGTCATCGTCGTCGCCGCTGATAATTCCCCCCATGGGAGACAGCACC
AGAGACAACACCGGGCAGGGTCATACGTCGCCCGATCCTCTCGCCGACCC
CTTCGCGGTCGGGTATTCTTCTCCCAATAGTGTTCAAGGCGGGACTGTCA
AGGACAGAACGCCGCCGGTTAGTTTTCCAGACAGTTTTGGCGCCGACCGA
AAGCGATTCCAGAGCGGCGGCGATGTGGGGGGCCCGCAGCAGCAACAACA
ACAGCAGACCGCCGCGGATTCCCACCACGCGGAGCAACAGATCCTCCAGA
TGGCCAGGATACAGGCGCAGCGCGATGAGGAGATGGGCAGGCTGCGCGTG
AAACTCCAGCGGCAATCGGAGGAAATCCGGGCCCGAGAGGAACGCCTGGC
GACGCGGGACCAAGAGAAGGAGAGGCTAAAGGAGCAGGTGGGGGAGCTGG
AGGCGGAGGCGACGAGGTCGAAGGAGCTGCTGGACCAAGAGCACGGACCC
GAAAAGATGACCTACCTGAAGAACGTGGTGAAGAAGTTCGTCGTGAGCGA
GGGGAACGAGCGGCACCGCCTGGTGCCGGTTCTCGCGACCATCCTGAGCT
TCAGCCCGGCGGAGCTGAACGAGGTGGACAGGGCGGTCGCATCTGCCACT
AGCGGGGGGGGGAGCTCCTGGGGGTCTGTTTTTGGTTCCATGTGATCAGC
GGATTTGAAGCAGCGCATTACAGAACTGGAGGCGCTCGTCGAATCCGCCG
CGGCGCGGTGCAAGGAGCTGGAAGCCGGCATTGCTAGCTCTGTCGAGGAG
GGGGTCAAGGCTGCCAGGGACGAGACGGCGGCGGCCAACGGGCGCTTGGA
GGAGCAAAAGACGGCAACCGACGAGGCCAGGGGAGCTCTCGCGAGGGCCA
ACACCGAGCTTGACAAGGCTCGCCGAGAGCTCAAGCAGAGGGGCCAGCTC
GCGCGCAACCTCCTCGCCGAAAAGGACGCCGAGATCAGCCGCCTGAGATC
GGGTGGCCGCGGTCGTAATGGCGGTGGCCTTATCGCGGGAGAAACCGCTT
CCAACGTAAATAATGGCAATGCGTTTGGCTTCCAGCAGAAAGCGGTAGAG
GGGAAGACGCCATTTGTCTCCGTCGATGGCGTTTCGTCATCGTCGTCGCC
GCTGATAATTCCCCCCATGGGAGACAGCACCAGAGACAACACCGGGCAGG
GTCATACGTCGCCCGATCCTCTCGCCGACCCCTTCGCGGTCGGGTATTCT
TCTCCCAATAGTGTTCAAGGCGGGACTGTCAAGGACAGAACGCCGCCGGT
TAGTTTTCCAGACAGTTTTGGCGCCGACCGAAAGCGATTCCAGAGCGGCG
GCGATGTGGGGGGCCCGCAGCAGCAACAACAACAGCAGACCGCCGCGGAT
TCCCACCACGCGGAGCAACAGATCCTCCAGATGGCCAGGATACAGGCGCA
GCGCGATGAGGAGATGGGCAGGCTGCGCGTGAAACTCCAGCGGCAATCGG
AGGAAATCCGGGCCCGAGAGGAACGCCTGGCGACGCGGGACCAAGAGAAG
GAGAGGCTAAAGGAGCAGGTGGGGGAGCTGGAGGCGGAGGCGACGAGGTC
GAAGGAGCTGCTGGACCAAGAGCACGGACCCGAAAAGATGACCTACCTGA
AGAACGTGGTGAAGAAGTTCGTCGTGAGCGAGGGGAACGAGCGGCACCGC
CTGGTGCCGGTTCTCGCGACCATCCTGAGCTTCAGCCCGGCGGAGCTGAA
CGAGGTGGACAGGGCGGTCGCATCTGCCACTAGCGGGGGGGGGAGCTCCT
GGGGGTCTGTTTTTGGTTCCATGTGA
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