mRNA_H-elongata_contig203798.5798.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig203798.5798.1 vs. uniprot
Match: D8LNT7_ECTSI (AB hydrolase-1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNT7_ECTSI) HSP 1 Score: 134 bits (337), Expect = 5.930e-36 Identity = 68/86 (79.07%), Postives = 75/86 (87.21%), Query Frame = 1
Query: 1 ERRVFAVDMRNHGTSSHHDTMTYAEMADDVLGFLADEVRESASPGLSQAVLVGHSMGGKAAAMTALLHPHAVRGLVVMDIAPVSYS 258
ERRVFAVDMRNHG SSHHD+MTY +MA+DVLGFLAD+ GLS+AVL+GHSMGGKAAAMTALLHP V+GLVVMDIAPVSYS
Sbjct: 145 ERRVFAVDMRNHGASSHHDSMTYVDMANDVLGFLADK-------GLSEAVLIGHSMGGKAAAMTALLHPQVVKGLVVMDIAPVSYS 223
BLAST of mRNA_H-elongata_contig203798.5798.1 vs. uniprot
Match: A0A836CHF5_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHF5_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.230e-27 Identity = 57/85 (67.06%), Postives = 64/85 (75.29%), Query Frame = 1
Query: 4 RRVFAVDMRNHGTSSHHDTMTYAEMADDVLGFLADEVRESASPGLSQAVLVGHSMGGKAAAMTALLHPHAVRGLVVMDIAPVSYS 258
RRVFAVDMRNHG SSHH +MTY +MA D++ F+ GL +AVLVGHSMGGK A MTALLHP V+GLVVMDIAPV YS
Sbjct: 129 RRVFAVDMRNHGASSHHASMTYPDMAGDIVAFMEQR-------GLGKAVLVGHSMGGKVACMTALLHPERVQGLVVMDIAPVPYS 206
BLAST of mRNA_H-elongata_contig203798.5798.1 vs. uniprot
Match: A0A7S2V5V8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5V8_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 8.010e-23 Identity = 47/86 (54.65%), Postives = 56/86 (65.12%), Query Frame = 1
Query: 1 ERRVFAVDMRNHGTSSHHDTMTYAEMADDVLGFLADEVRESASPGLSQAVLVGHSMGGKAAAMTALLHPHAVRGLVVMDIAPVSYS 258
+R++F VD RNHG S H D M Y +M DD+L F + G+ +A+LVGHSMGGK A ALLHP V GLVVMDIAPV Y
Sbjct: 42 QRKIFIVDQRNHGNSGHSDGMRYTDMVDDLLEFYEQQ-------GIDEAILVGHSMGGKTAMALALLHPQKVAGLVVMDIAPVPYG 120
BLAST of mRNA_H-elongata_contig203798.5798.1 vs. uniprot
Match: A0A4R4ZQV2_9ACTN (Alpha/beta fold hydrolase n=1 Tax=Kribbella antibiotica TaxID=190195 RepID=A0A4R4ZQV2_9ACTN) HSP 1 Score: 90.5 bits (223), Expect = 3.000e-20 Identity = 51/86 (59.30%), Postives = 60/86 (69.77%), Query Frame = 1
Query: 1 ERRVFAVDMRNHGTSSHHDTMTYAEMADDVLGFLADEVRESA-SPGLSQAVLVGHSMGGKAAAMTALLHPHAVRGLVVMDIAPVSY 255
+ RVFA+D+RNHGTS H DTM+Y EMADDV RE+ S G LVGHSMGGKAA +TALL+P V LVV+D APV+Y
Sbjct: 38 QHRVFALDLRNHGTSPHVDTMSYPEMADDV--------RETIESLGAGPVTLVGHSMGGKAAMLTALLYPAVVERLVVVDAAPVTY 115
BLAST of mRNA_H-elongata_contig203798.5798.1 vs. uniprot
Match: UPI0015D4E6A7 (alpha/beta fold hydrolase n=1 Tax=Azospirillum oleiclasticum TaxID=2735135 RepID=UPI0015D4E6A7) HSP 1 Score: 90.5 bits (223), Expect = 3.220e-20 Identity = 49/85 (57.65%), Postives = 60/85 (70.59%), Query Frame = 1
Query: 4 RRVFAVDMRNHGTSSHHDTMTYAEMADDVLGFLADEVRESASPGLSQAVLVGHSMGGKAAAMTALLHPHAVRGLVVMDIAPVSYS 258
+RV+A+D+RNHG+S TM+Y EMADDVL FL D G +AV+VGHSMGGKAA AL HP V LVV+DIAPV+Y+
Sbjct: 45 QRVYALDLRNHGSSPWAPTMSYPEMADDVLRFLDDR-------GFRRAVVVGHSMGGKAAMTLALNHPERVERLVVVDIAPVAYT 122
BLAST of mRNA_H-elongata_contig203798.5798.1 vs. uniprot
Match: A0A7S0AM27_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AM27_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 8.620e-20 Identity = 47/87 (54.02%), Postives = 57/87 (65.52%), Query Frame = 1
Query: 1 ERRVFAVDMRNHGTSSHHDTMTYAEMADDVLGFLADEVRESASPGLSQAVLVGHSMGGKAAAMTALLHPHAVRGLVVMDIAPVSYST 261
+RR+ AVD+RNHG S H D+M+Y A D+L + E G+ +AVLVGHSMGGK ALLHP V GLVVMDI+PV Y T
Sbjct: 120 KRRIIAVDLRNHGESGHADSMSYTAQAQDLLKVMDRE-------GMEEAVLVGHSMGGKVVKAAALLHPDRVAGLVVMDISPVRYET 199
BLAST of mRNA_H-elongata_contig203798.5798.1 vs. uniprot
Match: A0A2U1VIE4_9PROT (Esterase n=1 Tax=Azospirillum sp. TSO35-2 TaxID=716796 RepID=A0A2U1VIE4_9PROT) HSP 1 Score: 88.6 bits (218), Expect = 1.780e-19 Identity = 47/85 (55.29%), Postives = 58/85 (68.24%), Query Frame = 1
Query: 4 RRVFAVDMRNHGTSSHHDTMTYAEMADDVLGFLADEVRESASPGLSQAVLVGHSMGGKAAAMTALLHPHAVRGLVVMDIAPVSYS 258
RRV+A+D+RNHG + D M+Y EMADDVL FL D G ++A +VGHSMGGK A AL HP V LVV+DIAPV+Y+
Sbjct: 46 RRVYALDLRNHGGAPWDDGMSYPEMADDVLRFLDDR-------GFARATVVGHSMGGKTAMALALAHPERVERLVVVDIAPVAYT 123
BLAST of mRNA_H-elongata_contig203798.5798.1 vs. uniprot
Match: A0A4R2CCD8_9ACTN (Pimeloyl-ACP methyl ester carboxylesterase n=2 Tax=unclassified Kribbella TaxID=2644121 RepID=A0A4R2CCD8_9ACTN) HSP 1 Score: 87.8 bits (216), Expect = 3.180e-19 Identity = 48/85 (56.47%), Postives = 56/85 (65.88%), Query Frame = 1
Query: 1 ERRVFAVDMRNHGTSSHHDTMTYAEMADDVLGFLADEVRESASPGLSQAVLVGHSMGGKAAAMTALLHPHAVRGLVVMDIAPVSY 255
E RVFA D+RNHGTS H DTM+Y EMA+DV ++ S G+ LVGHSMGGK A +TAL H V LVV+D APVSY
Sbjct: 38 EHRVFAFDLRNHGTSPHTDTMSYPEMAEDVYETIS-------SLGVGPVALVGHSMGGKTAMLTALRHAAVVERLVVVDAAPVSY 115
BLAST of mRNA_H-elongata_contig203798.5798.1 vs. uniprot
Match: UPI001AE15BF3 (alpha/beta fold hydrolase n=1 Tax=Azospirillum rugosum TaxID=416170 RepID=UPI001AE15BF3) HSP 1 Score: 87.8 bits (216), Expect = 3.450e-19 Identity = 47/84 (55.95%), Postives = 57/84 (67.86%), Query Frame = 1
Query: 7 RVFAVDMRNHGTSSHHDTMTYAEMADDVLGFLADEVRESASPGLSQAVLVGHSMGGKAAAMTALLHPHAVRGLVVMDIAPVSYS 258
RV+A+D+RNHG S D+MTY EMADDVL FL D G ++A +VGHSMGGK A AL HP V L+V DIAPV+Y+
Sbjct: 46 RVYALDLRNHGGSPWSDSMTYPEMADDVLRFLDDR-------GFARAAVVGHSMGGKTAMTLALKHPDRVERLLVADIAPVTYT 122
BLAST of mRNA_H-elongata_contig203798.5798.1 vs. uniprot
Match: D2Q263_KRIFD (Alpha/beta hydrolase fold protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) TaxID=479435 RepID=D2Q263_KRIFD) HSP 1 Score: 87.4 bits (215), Expect = 4.460e-19 Identity = 49/84 (58.33%), Postives = 56/84 (66.67%), Query Frame = 1
Query: 7 RVFAVDMRNHGTSSHHDTMTYAEMADDVLGFLADEVRESASP-GLSQAVLVGHSMGGKAAAMTALLHPHAVRGLVVMDIAPVSY 255
RVFA D+RNHGTS H TM+Y E+ADDV RE+ G+ LVGHSMGGKAA +TAL HP V LVV+D APVSY
Sbjct: 40 RVFAFDLRNHGTSPHVPTMSYPELADDV--------RETVEGLGVGPVALVGHSMGGKAAMLTALTHPEVVERLVVVDAAPVSY 115 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig203798.5798.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig203798.5798.1 >prot_H-elongata_contig203798.5798.1 ID=prot_H-elongata_contig203798.5798.1|Name=mRNA_H-elongata_contig203798.5798.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=80bp MRNHGTSSHHDTMTYAEMADDVLGFLADEVRESASPGLSQAVLVGHSMGGback to top mRNA from alignment at H-elongata_contig203798:209..723- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig203798.5798.1 ID=mRNA_H-elongata_contig203798.5798.1|Name=mRNA_H-elongata_contig203798.5798.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=515bp|location=Sequence derived from alignment at H-elongata_contig203798:209..723- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig203798:209..723- >mRNA_H-elongata_contig203798.5798.1 ID=mRNA_H-elongata_contig203798.5798.1|Name=mRNA_H-elongata_contig203798.5798.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=480bp|location=Sequence derived from alignment at H-elongata_contig203798:209..723- (Himanthalia elongata Himel1 dioecious)back to top |