mRNA_H-elongata_contig202937.5757.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig202937.5757.1 vs. uniprot
Match: D7G461_ECTSI (JMJD6 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G461_ECTSI) HSP 1 Score: 179 bits (454), Expect = 6.230e-52 Identity = 89/119 (74.79%), Postives = 105/119 (88.24%), Query Frame = 1
Query: 1 VNYFVDILPRIRRKYGESLKIYEFVQYPGDTVFVPGGWHHAVLNLDDTVAITQNFCSLQSSPRPVWRKTRTGRKKMAVKWLRELEREYPHLARTARWLNAEDGFVMDEEG--SRRRSAH 351
+NYFVD+LPRIRRK+G S+KIYEFVQYPGDTVFVPGGW HAVLNL+D+VAITQNFCS + + VWRKTRTGRKKM+VKWL+EL++E+P LA TAR LN+EDGFVM ++G SRRRS H
Sbjct: 262 INYFVDLLPRIRRKHGNSIKIYEFVQYPGDTVFVPGGWWHAVLNLEDSVAITQNFCSRNNFEK-VWRKTRTGRKKMSVKWLKELDKEHPSLADTARRLNSEDGFVMVDKGASSRRRSGH 379
BLAST of mRNA_H-elongata_contig202937.5757.1 vs. uniprot
Match: K3X3W1_GLOUD (JmjC domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3W1_GLOUD) HSP 1 Score: 146 bits (368), Expect = 6.850e-40 Identity = 70/107 (65.42%), Postives = 89/107 (83.18%), Query Frame = 1
Query: 1 VNYFVDILPRIRRKYG-ESLKIYEFVQYPGDTVFVPGGWHHAVLNLDDTVAITQNFCSLQSSPRPVWRKTRTGRKKMAVKWLRELEREYPHLARTARWLNAEDGFVM 318
VNYF+DILPRI+R + E L+ E +QYPGDT+FVPGGW HAV N++DTVA+TQNFCS Q+ R VWRKTR+GRK+MAVKWL +LE+++PHLA A+ LNA+D +VM
Sbjct: 226 VNYFMDILPRIKRAHPPEMLRCIELMQYPGDTIFVPGGWWHAVFNVEDTVAVTQNFCSSQNFER-VWRKTRSGRKRMAVKWLTKLEKKHPHLAALAKELNAQDNYVM 331
BLAST of mRNA_H-elongata_contig202937.5757.1 vs. uniprot
Match: A0A7S3GT28_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GT28_9STRA) HSP 1 Score: 144 bits (363), Expect = 1.060e-37 Identity = 66/106 (62.26%), Postives = 83/106 (78.30%), Query Frame = 1
Query: 1 VNYFVDILPRIRRKYGESLKIYEFVQYPGDTVFVPGGWHHAVLNLDDTVAITQNFCSLQSSPRPVWRKTRTGRKKMAVKWLRELEREYPHLARTARWLNAEDGFVM 318
+NYFVD+LPRIR K+G +LKIYE +Q PG+T+FVPGGW H VLNL+DT+A+TQNFCS + P VWR TR GR KM+V+WL+EL ++YP LA A LN +D F M
Sbjct: 251 INYFVDMLPRIREKHGHNLKIYELIQEPGETIFVPGGWWHGVLNLEDTIAVTQNFCSCTNFP-SVWRSTRKGRPKMSVRWLKELAKQYPDLAAQALLLNDQDQFAM 355
BLAST of mRNA_H-elongata_contig202937.5757.1 vs. uniprot
Match: A0A484E8M1_BRELC (JmjC domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E8M1_BRELC) HSP 1 Score: 141 bits (356), Expect = 1.180e-37 Identity = 69/107 (64.49%), Postives = 87/107 (81.31%), Query Frame = 1
Query: 1 VNYFVDILPRIRR-KYGESLKIYEFVQYPGDTVFVPGGWHHAVLNLDDTVAITQNFCSLQSSPRPVWRKTRTGRKKMAVKWLRELEREYPHLARTARWLNAEDGFVM 318
VNYF+D+LPRI++ +SL+ EF+QYPG+TVF+PGGW HAVLN++DTVA+TQNFCS Q+ P VWRKTR GRK+MAVKWLR+LE +YP LA A LN +D +VM
Sbjct: 282 VNYFMDLLPRIKQANSSKSLQCIEFMQYPGETVFIPGGWWHAVLNVEDTVAVTQNFCSSQNFP-AVWRKTRKGRKRMAVKWLRKLELQYPELAVVATKLNQKDKYVM 387
BLAST of mRNA_H-elongata_contig202937.5757.1 vs. uniprot
Match: A0A8K1CVA6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CVA6_PYTOL) HSP 1 Score: 141 bits (356), Expect = 1.220e-37 Identity = 68/107 (63.55%), Postives = 86/107 (80.37%), Query Frame = 1
Query: 1 VNYFVDILPRIRRKYG-ESLKIYEFVQYPGDTVFVPGGWHHAVLNLDDTVAITQNFCSLQSSPRPVWRKTRTGRKKMAVKWLRELEREYPHLARTARWLNAEDGFVM 318
VNYF+DILPRI++ + E L+ E +QYPGDT+FVPGGW HAV N++DTVA+TQN+CS Q+ R VWRKTRTGRK+MAVKW ++L++ +P LA A LN EDGFVM
Sbjct: 269 VNYFMDILPRIKKAHSPEELQCIELMQYPGDTIFVPGGWWHAVFNVEDTVAVTQNYCSSQNFER-VWRKTRTGRKRMAVKWFQKLQKHHPQLATLAVKLNREDGFVM 374
BLAST of mRNA_H-elongata_contig202937.5757.1 vs. uniprot
Match: V9EZE5_PHYPR (JmjC domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=V9EZE5_PHYPR) HSP 1 Score: 140 bits (353), Expect = 3.570e-37 Identity = 69/107 (64.49%), Postives = 85/107 (79.44%), Query Frame = 1
Query: 1 VNYFVDILPRIRRKYG-ESLKIYEFVQYPGDTVFVPGGWHHAVLNLDDTVAITQNFCSLQSSPRPVWRKTRTGRKKMAVKWLRELEREYPHLARTARWLNAEDGFVM 318
VNYF+D+LPRI+R E+L+ EF+QYPG+TVF+PGGW HAV N+DDTVA+TQNFCS Q+ P VWRKTR+GRK+MAVKWL++LE P LA A LN +D FVM
Sbjct: 291 VNYFMDLLPRIKRANAPETLQCIEFMQYPGETVFIPGGWWHAVFNVDDTVAVTQNFCSSQNFP-AVWRKTRSGRKRMAVKWLKKLETHNPELAALATELNQKDKFVM 396
BLAST of mRNA_H-elongata_contig202937.5757.1 vs. uniprot
Match: A0A7S2D476_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D476_9STRA) HSP 1 Score: 135 bits (340), Expect = 1.170e-36 Identity = 65/102 (63.73%), Postives = 81/102 (79.41%), Query Frame = 1
Query: 1 VNYFVDILPRIRRKYGESLKIYEFVQYPGDTVFVPGGWHHAVLNLDDTVAITQNFCSLQSSPRPVWRKTRTGRKKMAVKWLRELEREYPHLARTARWLNAED 306
+NYFVD++PR+RR + E LKI +F+QYPG+T+FVPGGW HAV+NLDDT+ ITQNFCS + P VWRKTRTGRKKMAVKWL++L YP L+ A +N D
Sbjct: 82 INYFVDMIPRMRRAHPE-LKIDQFIQYPGETIFVPGGWWHAVINLDDTIGITQNFCSKTNFP-VVWRKTRTGRKKMAVKWLQKLRENYPELSNLALAINQAD 181
BLAST of mRNA_H-elongata_contig202937.5757.1 vs. uniprot
Match: A0A662YDJ8_9STRA (JmjC domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YDJ8_9STRA) HSP 1 Score: 139 bits (349), Expect = 1.300e-36 Identity = 67/107 (62.62%), Postives = 86/107 (80.37%), Query Frame = 1
Query: 1 VNYFVDILPRIRR-KYGESLKIYEFVQYPGDTVFVPGGWHHAVLNLDDTVAITQNFCSLQSSPRPVWRKTRTGRKKMAVKWLRELEREYPHLARTARWLNAEDGFVM 318
VNYF+D+LPR++R E+L EF+QYPG+TVF+PGGW HAVLN+DDTVA+TQNFCS Q+ VWRKTR+GRK+MAVKWL++LE ++P LA A LN +D +VM
Sbjct: 281 VNYFMDLLPRLKRASSAETLGCIEFMQYPGETVFIPGGWWHAVLNVDDTVAVTQNFCSSQNFA-TVWRKTRSGRKRMAVKWLKKLEEQHPELAAMATELNQKDKYVM 386
BLAST of mRNA_H-elongata_contig202937.5757.1 vs. uniprot
Match: M4BIS7_HYAAE (JmjC domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BIS7_HYAAE) HSP 1 Score: 138 bits (348), Expect = 1.910e-36 Identity = 69/114 (60.53%), Postives = 88/114 (77.19%), Query Frame = 1
Query: 1 VNYFVDILPRIRRKYG-ESLKIYEFVQYPGDTVFVPGGWHHAVLNLDDTVAITQNFCSLQSSPRPVWRKTRTGRKKMAVKWLRELEREYPHLARTARWLNAEDGFVMDEEGSRR 339
VNYF+D+LPR+++ E+L+ EF+Q+PG+TVF+PGGW HAVLN+DDTVA+TQNFCS Q+ P VWRKTR+ RK+MAVKWL+ LE P LA A LN +D FVM +G RR
Sbjct: 287 VNYFMDLLPRLKQASSPETLQCVEFMQFPGETVFIPGGWWHAVLNVDDTVAVTQNFCSSQNFP-TVWRKTRSSRKRMAVKWLKRLETHNPELAAMAMKLNQDDKFVMYSKGRRR 399
BLAST of mRNA_H-elongata_contig202937.5757.1 vs. uniprot
Match: A0A7S1TSI9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSI9_9STRA) HSP 1 Score: 134 bits (336), Expect = 2.090e-36 Identity = 65/108 (60.19%), Postives = 81/108 (75.00%), Query Frame = 1
Query: 1 VNYFVDILPRIRRKYGESLKIYEFVQYPGDTVFVPGGWHHAVLNLDDTVAITQNFCSLQSSPRPVWRKTRTGRKKMAVKWLRELEREYPHLARTARWLNAEDGFVMDE 324
+NYFVD+LPR+RR+Y ++I +F+Q G+TVFVP GW HAVLNLDDT+A+TQNFCS + P WRK R RKKMA KWL +L+ P LAR R +NAEDGF M+E
Sbjct: 95 INYFVDLLPRMRRRYAGRIRIIDFIQQEGETVFVPEGWWHAVLNLDDTMAVTQNFCSSVNLP-VAWRKCRVERKKMARKWLYKLDETRPDLARVVRDVNAEDGFPMEE 201 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig202937.5757.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig202937.5757.1 >prot_H-elongata_contig202937.5757.1 ID=prot_H-elongata_contig202937.5757.1|Name=mRNA_H-elongata_contig202937.5757.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp VNYFVDILPRIRRKYGESLKIYEFVQYPGDTVFVPGGWHHAVLNLDDTVAback to top mRNA from alignment at H-elongata_contig202937:221..961+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig202937.5757.1 ID=mRNA_H-elongata_contig202937.5757.1|Name=mRNA_H-elongata_contig202937.5757.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=741bp|location=Sequence derived from alignment at H-elongata_contig202937:221..961+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig202937:221..961+ >mRNA_H-elongata_contig202937.5757.1 ID=mRNA_H-elongata_contig202937.5757.1|Name=mRNA_H-elongata_contig202937.5757.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=816bp|location=Sequence derived from alignment at H-elongata_contig202937:221..961+ (Himanthalia elongata Himel1 dioecious)back to top |