mRNA_H-elongata_contig20024.5640.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig20024.5640.1 vs. uniprot
Match: D8LCA9_ECTSI (Abhydrolase domain containing 14B n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCA9_ECTSI) HSP 1 Score: 243 bits (620), Expect = 2.620e-73 Identity = 128/204 (62.75%), Postives = 149/204 (73.04%), Query Frame = 3
Query: 6 GFIYVLGKAIKFLGNLGVVSSTTAP------GAPNVLLLHGTRFSAQTWQDLGTISLLVGAGYRVVAVDLHMYSTYPPRDVLLERICYALGMSEANPTVIVSPSMSGSFSVPLLLRNPRLFAGYVPVAPGIAGEHSTEEFAAVTGVPALIVYGEKDSMGARVSNILSAIPGSHLVMIEGAGHPAYLDEPDLFHEYLLEFLKNDV 599
G I V+G + FLGNLG SS ++P NVLLLHG +FSAQTWQDLGT+SLL G+RV AV+L T PRD LLE IC LGM +P VIVSPSMSGSFSVPLLL P LFAGYVPVAPG A ++ E+FAAVTGVPALIVYGE D MG+R S++LS+IPGS ++M+ GA HP Y+DEPD+FHE LL FL D
Sbjct: 41 GSIDVVGTQVSFLGNLG--SSPSSPTGEEAGAVRNVLLLHGAKFSAQTWQDLGTLSLLATNGFRVAAVNLPTRVTTSPRDELLELICSGLGMGVDSPAVIVSPSMSGSFSVPLLLSKPELFAGYVPVAPGQALSYTAEDFAAVTGVPALIVYGELDRMGSRASSLLSSIPGSRVLMVPGASHPCYIDEPDMFHESLLSFLNEDA 242
BLAST of mRNA_H-elongata_contig20024.5640.1 vs. uniprot
Match: A0A6J0HPJ9_9PASS (protein ABHD14A n=9 Tax=Passeriformes TaxID=9126 RepID=A0A6J0HPJ9_9PASS) HSP 1 Score: 144 bits (364), Expect = 5.550e-36 Identity = 78/188 (41.49%), Postives = 113/188 (60.11%), Query Frame = 3
Query: 57 VVSSTTAPGAPNVLLLHGTRFSAQTWQDLGTISLLVGAGYRVVAVDLHMYSTYPP---------RDVLLERICYALGMSEANPTVIVSPSMSGSFSVPLLLRNPRLFAGYVPVAPGIAGEHSTEEFAAVTGVPALIVYGEKDS-MGARVSNILSAIPGSHLVMIEGAGHPAYLDEPDLFHEYLLEFLK 590
V + T PG P+VL LHG F+++TW+ LGT++LL G GYR VA+DL Y PP R L+ + LGM V+VSPSMSG FS+P LL + +G+VP+AP +++ E++ V P LI+YG++D+ + + L +P H+V++ GAGH YLD+P+ FH LL FL+
Sbjct: 66 VPAGTAGPGRPDVLFLHGQAFTSKTWEALGTLALLAGEGYRAVAIDLPGYGDSPPVEMVVTAQGRVAFLDHVLQELGMRRP---VLVSPSMSGRFSLPFLLEHGDWLSGFVPIAPVGTKDYTAEQYRRVQ-TPTLILYGDRDTGLAPQALQNLQHLPEHHVVILPGAGHACYLDKPEDFHRALLGFLR 249
BLAST of mRNA_H-elongata_contig20024.5640.1 vs. uniprot
Match: A0A2E6D702_9BACT (Alpha/beta hydrolase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E6D702_9BACT) HSP 1 Score: 143 bits (361), Expect = 8.100e-36 Identity = 80/179 (44.69%), Postives = 115/179 (64.25%), Query Frame = 3
Query: 75 APGAPNVLLLHGTRFSAQTWQDLGTISLLVGAGYRVVAVDLHMY----STYPPRDVLLERICYALGMSEANPTVIVSPSMSGSFSVPLLLRNPRLFAGYVPVAPGIAGEHSTEEFAAVTGVPALIVYGEKDSMG--ARVSNILSAIPGSHLVMIEGAGHPAYLDEPDLFHEYLLEFLKN 593
+P AP +LLLHG RFS++TW++LGT+ L AG RVVAVDL Y ST V LE++ A+ + V+V+PSMSG+F+ P +L + G+VPVAP ++ E VP L+++G DS+ A ++ +AIP + L+++EGA HPAYLD+PDLFHE LLEF+++
Sbjct: 55 SPDAPALLLLHGARFSSETWRELGTLEHLASAGLRVVAVDLPGYGGSTSTELEASVFLEQLVGAMSLERP---VVVAPSMSGTFAFPFVLDHGASCGGFVPVAPAAVARYA--ERLGEIRVPTLVLWGTADSVFPVAGAESLAAAIPDAELMLLEGAPHPAYLDQPDLFHERLLEFVRS 228
BLAST of mRNA_H-elongata_contig20024.5640.1 vs. uniprot
Match: A0A2G8KXK4_STIJA (Putative alpha/beta hydrolase domain-containing protein 14B n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KXK4_STIJA) HSP 1 Score: 143 bits (360), Expect = 8.730e-36 Identity = 79/181 (43.65%), Postives = 105/181 (58.01%), Query Frame = 3
Query: 60 VSSTTAPGAPNVLLLHGTRFSAQTWQDLGTISLLVGAGYRVVAVDLHMYS-----TYPPRDVLLERICYALGMSEANPTVIVSPSMSGSFSVPLLLRNPRLFAGYVPVAPGIAGEHSTEEFAAVTGVPALIVYGEKDS-MGARVSNILSAIPGSHLVMIEGAGHPAYLDEPDLFHEYLLEF 584
VSST +L LHG F +QTW DLGT+ + AGY VA+DL Y +Y + L + ALG+ + P +I+SPSMSG FS+PLL NP F GY+PVAP H+ +E++AV +P IVYGE D +G LS IP + ++ GAGH AY++ P FH+ LL F
Sbjct: 37 VSSTVDQVRGTLLFLHGQSFKSQTWHDLGTLHFMANAGYNAVAIDLPGYGKTESFSYGGQAPFLLGVKEALGLKD-TPVIIISPSMSGGFSIPLLFSNPEAFKGYLPVAPVNTASHTHKEYSAVK-IPTCIVYGENDKGLGVASFRDLSNIPNKQVHVLSGAGHAAYMNSPGEFHQILLNF 215
BLAST of mRNA_H-elongata_contig20024.5640.1 vs. uniprot
Match: A0A7R9BXC4_9CRUS (Hypothetical protein n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9BXC4_9CRUS) HSP 1 Score: 147 bits (370), Expect = 1.500e-35 Identity = 87/203 (42.86%), Postives = 117/203 (57.64%), Query Frame = 3
Query: 21 LGKAIKFLGNLGVVSSTTAPG----APNVLLLHGTRFSAQTWQDLGTISLLVGAGYRVVAVDLH--MYSTYPPRDV-------LLERICYALGMSEANPTVIVSPSMSGSFSVPLLLRNPRLFAGYVPVAPGIAGEHSTEEFAAVTGVPALIVYGEKDSMGARVSNILSAIPGSHLVMIEGAGHPAYLDEPDLFHEYLLEFLK 590
LG ++ LG++ + G VLLLHG FS++TW +L T+ LL G+ VVAVDL S P V LE G+ P V+VSPSMSG+FS+ LL P +FAG+VPVAP + + T+E+ VP L++YG++D G RVS L IP S +VMIE A HPAY+D+PD+FHE + FL+
Sbjct: 147 LGSTLRSLGDILSEGGLSLVGYVVLIAQVLLLHGASFSSKTWLELHTLPLLAAMGHHVVAVDLPGGTESLTPAVPVAPHFQKDFLEAFISRAGL---KPAVVVSPSMSGTFSLSLLRSKPEMFAGFVPVAP-VMSDELTQEYLGSLRVPTLVLYGDRDQHGKRVSEKLGKIPTSRVVMIEEASHPAYIDQPDVFHELMYNFLR 345
BLAST of mRNA_H-elongata_contig20024.5640.1 vs. uniprot
Match: UPI0001CBC155 (alpha/beta hydrolase domain-containing protein 14B-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBC155) HSP 1 Score: 141 bits (355), Expect = 6.880e-35 Identity = 74/170 (43.53%), Postives = 111/170 (65.29%), Query Frame = 3
Query: 90 NVLLLHGTRFSAQTWQDLGTISLLVGAGYRVVAVDLHMYSTYPPRDVLLERICYALGMSEA---NPTVIVSPSMSGSFSVPLLLRNPRLFAGYVPVAPGIAGEHSTEEFAAVTGVPALIVYGEKDS-MGARVSNILSAIPGSHLVMIEGAGHPAYLDEPDLFHEYLLEFL 587
+VLLLHG RF++Q W D+GT+ ++ GYR VAVDL Y ++ +++ + L + +A +VIVSPSMSG+F++PLL+++P +F GYVPVAP +S +++ + VP IVYGE D+ G + N L +P S + +IEGAGHPA+LD+P +H + FL
Sbjct: 64 SVLLLHGKRFTSQNWFDIGTLQHMIRFGYRAVAVDLPGYGLSKDVELTVDKGEFLLNIIKALKLEHSVIVSPSMSGTFALPLLMKHPEVFRGYVPVAPVETELYSADQYGKIQ-VPTFIVYGEHDTDFGQKSMNNLKNLPNSRIYVIEGAGHPAWLDQPITWHNLMYNFL 232
BLAST of mRNA_H-elongata_contig20024.5640.1 vs. uniprot
Match: A0A3B1KBY6_ASTMX (Abhydrolase domain containing 14B n=2 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A3B1KBY6_ASTMX) HSP 1 Score: 140 bits (353), Expect = 6.990e-35 Identity = 77/178 (43.26%), Postives = 110/178 (61.80%), Query Frame = 3
Query: 93 VLLLHGTRFSAQTWQDLGTISLLVGAGYRVVAVDL----HMYSTYPPRDV-------LLERICYALGMSEANPTVIVSPSMSGSFSVPLLLRNPRLFAGYVPVAPGIAGEHSTEEFAAVTGVPALIVYGEKDSMGARVS-NILSAIPGSHLVMIEGAGHPAYLDEPDLFHEYLLEFLK 590
VLLLHG RFS++ W +GT+S L GAG R VAVDL + PP V L+++C LG P V++SPS+SG +S+P LL++ Y+PVAP + + E++ V VP LIVYG++D+ VS LS +P +V+++GAGHP YLD+P+ +H+ +LEFLK
Sbjct: 38 VLLLHGIRFSSENWVSIGTLSCLAGAGLRAVAVDLPGLGQSKAAEPPAPVGEPAPGEFLKQVCEGLG---TGPVVVISPSLSGMYSLPFLLQHTHQLKAYIPVAPICTNKFTAEQYRDVQ-VPTLIVYGDQDTQLGEVSLKNLSNLPNHRVVVMKGAGHPCYLDDPETWHKSILEFLK 211
BLAST of mRNA_H-elongata_contig20024.5640.1 vs. uniprot
Match: A0A8C5J7G6_JUNHY (Abhydrolase domain containing 14A n=4 Tax=Passeriformes TaxID=9126 RepID=A0A8C5J7G6_JUNHY) HSP 1 Score: 141 bits (355), Expect = 9.490e-35 Identity = 76/186 (40.86%), Postives = 110/186 (59.14%), Query Frame = 3
Query: 63 SSTTAPGAPNVLLLHGTRFSAQTWQDLGTISLLVGAGYRVVAVDLHMYSTYPP---------RDVLLERICYALGMSEANPTVIVSPSMSGSFSVPLLLRNPRLFAGYVPVAPGIAGEHSTEEFAAVTGVPALIVYGEKDS-MGARVSNILSAIPGSHLVMIEGAGHPAYLDEPDLFHEYLLEFLK 590
++ PG P+VL LHG F+++TW+ LGT++LL G GYR VA+DL Y PP R L+R+ LGM V++SPSMSG FS+P LL + AG+VP+AP + + E++ AV P LI+YG+ D+ + + L +P + ++ GAGH YLD+P+ FH LL FL+
Sbjct: 65 AAAAGPGRPDVLFLHGQAFTSKTWEALGTLALLAGEGYRAVAIDLPGYGDSPPMEMALTAQGRRAFLDRVLQELGMQRP---VLISPSMSGRFSLPFLLAHGDRLAGFVPIAPVGTKDFTAEQYRAVQ-TPTLILYGDHDTGLAPQALQNLQHLPKHRVAVLSGAGHACYLDKPEEFHRALLGFLR 246
BLAST of mRNA_H-elongata_contig20024.5640.1 vs. uniprot
Match: A0A2E5YRI1_9DELT (Alpha/beta hydrolase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E5YRI1_9DELT) HSP 1 Score: 140 bits (353), Expect = 1.910e-34 Identity = 81/182 (44.51%), Postives = 114/182 (62.64%), Query Frame = 3
Query: 60 VSSTTAPGAPNVLLLHGTRFSAQTWQDLGTISLLVGAGYRVVAVDLHMYSTYPPRDVLLE----RICYALGMSEANPTVIVSPSMSGSFSVPLLLRNPRLFAGYVPVAPGIAGEHSTEEFAAVTGVPALIVYGEKDSM--GARVSNILSAIPGSHLVMIEGAGHPAYLDEPDLFHEYLLEFL 587
+++ A G P VLLLHG FS++TWQ LGTI LL AGYRV+A+DL + P R V + LG+ V+VSPSMSG FS+PL+ ++P+ AGYVP+AP + E + E + VPAL+ +GEKD + A+ + + + ++++ GAGHPAYLD+P FHE LLEF+
Sbjct: 69 ITAGPAEGRP-VLLLHGAAFSSKTWQGLGTIDLLAKAGYRVIAIDLPGFGKSPNRRVDARSFGVELLAHLGIDRV---VVVSPSMSGRFSLPLVRQHPKRLAGYVPIAPVGSIEFAKEP--KKSPVPALVTWGEKDGLFPPAQAKRLAQSFEEAEVLILPGAGHPAYLDQPKRFHEALLEFI 244
BLAST of mRNA_H-elongata_contig20024.5640.1 vs. uniprot
Match: A0A800KMA9_9BACT (Alpha/beta hydrolase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800KMA9_9BACT) HSP 1 Score: 138 bits (347), Expect = 7.600e-34 Identity = 79/178 (44.38%), Postives = 111/178 (62.36%), Query Frame = 3
Query: 78 PGAPNVLLLHGTRFSAQTWQDLGTISLLVGAGYRVVAVDLHMY----STYPPRDVLLERICYALGMSEANPTVIVSPSMSGSFSVPLLLRNPRLFAGYVPVAPGIAGEHSTEEFAAVTGVPALIVYGEKDSMG--ARVSNILSAIPGSHLVMIEGAGHPAYLDEPDLFHEYLLEFLKN 593
P AP +LLLHG RFS++TW++LGT+ L AG RVVAVDL Y ST L ++ ALG+ V+V+PSMSG+F+ P +L + G+VPVAP H E + VP L+++G DS+ A ++ +AIP + L++ +GA HPAYLD+PDLFHE LL F+++
Sbjct: 56 PDAPALLLLHGARFSSETWRELGTLEHLASAGLRVVAVDLPGYGGSTSTELEAGKFLAQLVEALGLERP---VVVAPSMSGAFAFPFVLDHGASCGGFVPVAPAAVARH--EARLSEIRVPTLVMWGTADSVFPVAGAESLAAAIPDAGLLLFKGAPHPAYLDQPDLFHERLLAFVRS 228 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20024.5640.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig20024.5640.1 >prot_H-elongata_contig20024.5640.1 ID=prot_H-elongata_contig20024.5640.1|Name=mRNA_H-elongata_contig20024.5640.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=144bp MYSTYPPRDVLLERICYALGMSEANPTVIVSPSMSGSFSVPLLLRNPRLFback to top mRNA from alignment at H-elongata_contig20024:3735..6331- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig20024.5640.1 ID=mRNA_H-elongata_contig20024.5640.1|Name=mRNA_H-elongata_contig20024.5640.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2597bp|location=Sequence derived from alignment at H-elongata_contig20024:3735..6331- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig20024:3735..6331- >mRNA_H-elongata_contig20024.5640.1 ID=mRNA_H-elongata_contig20024.5640.1|Name=mRNA_H-elongata_contig20024.5640.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=864bp|location=Sequence derived from alignment at H-elongata_contig20024:3735..6331- (Himanthalia elongata Himel1 dioecious)back to top |