mRNA_H-elongata_contig20024.5640.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig20024.5640.1
Unique NamemRNA_H-elongata_contig20024.5640.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig20024.5640.1 vs. uniprot
Match: D8LCA9_ECTSI (Abhydrolase domain containing 14B n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCA9_ECTSI)

HSP 1 Score: 243 bits (620), Expect = 2.620e-73
Identity = 128/204 (62.75%), Postives = 149/204 (73.04%), Query Frame = 3
Query:    6 GFIYVLGKAIKFLGNLGVVSSTTAP------GAPNVLLLHGTRFSAQTWQDLGTISLLVGAGYRVVAVDLHMYSTYPPRDVLLERICYALGMSEANPTVIVSPSMSGSFSVPLLLRNPRLFAGYVPVAPGIAGEHSTEEFAAVTGVPALIVYGEKDSMGARVSNILSAIPGSHLVMIEGAGHPAYLDEPDLFHEYLLEFLKNDV 599
            G I V+G  + FLGNLG  SS ++P         NVLLLHG +FSAQTWQDLGT+SLL   G+RV AV+L    T  PRD LLE IC  LGM   +P VIVSPSMSGSFSVPLLL  P LFAGYVPVAPG A  ++ E+FAAVTGVPALIVYGE D MG+R S++LS+IPGS ++M+ GA HP Y+DEPD+FHE LL FL  D 
Sbjct:   41 GSIDVVGTQVSFLGNLG--SSPSSPTGEEAGAVRNVLLLHGAKFSAQTWQDLGTLSLLATNGFRVAAVNLPTRVTTSPRDELLELICSGLGMGVDSPAVIVSPSMSGSFSVPLLLSKPELFAGYVPVAPGQALSYTAEDFAAVTGVPALIVYGELDRMGSRASSLLSSIPGSRVLMVPGASHPCYIDEPDMFHESLLSFLNEDA 242          
BLAST of mRNA_H-elongata_contig20024.5640.1 vs. uniprot
Match: A0A6J0HPJ9_9PASS (protein ABHD14A n=9 Tax=Passeriformes TaxID=9126 RepID=A0A6J0HPJ9_9PASS)

HSP 1 Score: 144 bits (364), Expect = 5.550e-36
Identity = 78/188 (41.49%), Postives = 113/188 (60.11%), Query Frame = 3
Query:   57 VVSSTTAPGAPNVLLLHGTRFSAQTWQDLGTISLLVGAGYRVVAVDLHMYSTYPP---------RDVLLERICYALGMSEANPTVIVSPSMSGSFSVPLLLRNPRLFAGYVPVAPGIAGEHSTEEFAAVTGVPALIVYGEKDS-MGARVSNILSAIPGSHLVMIEGAGHPAYLDEPDLFHEYLLEFLK 590
            V + T  PG P+VL LHG  F+++TW+ LGT++LL G GYR VA+DL  Y   PP         R   L+ +   LGM      V+VSPSMSG FS+P LL +    +G+VP+AP    +++ E++  V   P LI+YG++D+ +  +    L  +P  H+V++ GAGH  YLD+P+ FH  LL FL+
Sbjct:   66 VPAGTAGPGRPDVLFLHGQAFTSKTWEALGTLALLAGEGYRAVAIDLPGYGDSPPVEMVVTAQGRVAFLDHVLQELGMRRP---VLVSPSMSGRFSLPFLLEHGDWLSGFVPIAPVGTKDYTAEQYRRVQ-TPTLILYGDRDTGLAPQALQNLQHLPEHHVVILPGAGHACYLDKPEDFHRALLGFLR 249          
BLAST of mRNA_H-elongata_contig20024.5640.1 vs. uniprot
Match: A0A2E6D702_9BACT (Alpha/beta hydrolase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E6D702_9BACT)

HSP 1 Score: 143 bits (361), Expect = 8.100e-36
Identity = 80/179 (44.69%), Postives = 115/179 (64.25%), Query Frame = 3
Query:   75 APGAPNVLLLHGTRFSAQTWQDLGTISLLVGAGYRVVAVDLHMY----STYPPRDVLLERICYALGMSEANPTVIVSPSMSGSFSVPLLLRNPRLFAGYVPVAPGIAGEHSTEEFAAVTGVPALIVYGEKDSMG--ARVSNILSAIPGSHLVMIEGAGHPAYLDEPDLFHEYLLEFLKN 593
            +P AP +LLLHG RFS++TW++LGT+  L  AG RVVAVDL  Y    ST     V LE++  A+ +      V+V+PSMSG+F+ P +L +     G+VPVAP     ++  E      VP L+++G  DS+   A   ++ +AIP + L+++EGA HPAYLD+PDLFHE LLEF+++
Sbjct:   55 SPDAPALLLLHGARFSSETWRELGTLEHLASAGLRVVAVDLPGYGGSTSTELEASVFLEQLVGAMSLERP---VVVAPSMSGTFAFPFVLDHGASCGGFVPVAPAAVARYA--ERLGEIRVPTLVLWGTADSVFPVAGAESLAAAIPDAELMLLEGAPHPAYLDQPDLFHERLLEFVRS 228          
BLAST of mRNA_H-elongata_contig20024.5640.1 vs. uniprot
Match: A0A2G8KXK4_STIJA (Putative alpha/beta hydrolase domain-containing protein 14B n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KXK4_STIJA)

HSP 1 Score: 143 bits (360), Expect = 8.730e-36
Identity = 79/181 (43.65%), Postives = 105/181 (58.01%), Query Frame = 3
Query:   60 VSSTTAPGAPNVLLLHGTRFSAQTWQDLGTISLLVGAGYRVVAVDLHMYS-----TYPPRDVLLERICYALGMSEANPTVIVSPSMSGSFSVPLLLRNPRLFAGYVPVAPGIAGEHSTEEFAAVTGVPALIVYGEKDS-MGARVSNILSAIPGSHLVMIEGAGHPAYLDEPDLFHEYLLEF 584
            VSST       +L LHG  F +QTW DLGT+  +  AGY  VA+DL  Y      +Y  +   L  +  ALG+ +  P +I+SPSMSG FS+PLL  NP  F GY+PVAP     H+ +E++AV  +P  IVYGE D  +G      LS IP   + ++ GAGH AY++ P  FH+ LL F
Sbjct:   37 VSSTVDQVRGTLLFLHGQSFKSQTWHDLGTLHFMANAGYNAVAIDLPGYGKTESFSYGGQAPFLLGVKEALGLKD-TPVIIISPSMSGGFSIPLLFSNPEAFKGYLPVAPVNTASHTHKEYSAVK-IPTCIVYGENDKGLGVASFRDLSNIPNKQVHVLSGAGHAAYMNSPGEFHQILLNF 215          
BLAST of mRNA_H-elongata_contig20024.5640.1 vs. uniprot
Match: A0A7R9BXC4_9CRUS (Hypothetical protein n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9BXC4_9CRUS)

HSP 1 Score: 147 bits (370), Expect = 1.500e-35
Identity = 87/203 (42.86%), Postives = 117/203 (57.64%), Query Frame = 3
Query:   21 LGKAIKFLGNLGVVSSTTAPG----APNVLLLHGTRFSAQTWQDLGTISLLVGAGYRVVAVDLH--MYSTYPPRDV-------LLERICYALGMSEANPTVIVSPSMSGSFSVPLLLRNPRLFAGYVPVAPGIAGEHSTEEFAAVTGVPALIVYGEKDSMGARVSNILSAIPGSHLVMIEGAGHPAYLDEPDLFHEYLLEFLK 590
            LG  ++ LG++      +  G       VLLLHG  FS++TW +L T+ LL   G+ VVAVDL     S  P   V        LE      G+    P V+VSPSMSG+FS+ LL   P +FAG+VPVAP +  +  T+E+     VP L++YG++D  G RVS  L  IP S +VMIE A HPAY+D+PD+FHE +  FL+
Sbjct:  147 LGSTLRSLGDILSEGGLSLVGYVVLIAQVLLLHGASFSSKTWLELHTLPLLAAMGHHVVAVDLPGGTESLTPAVPVAPHFQKDFLEAFISRAGL---KPAVVVSPSMSGTFSLSLLRSKPEMFAGFVPVAP-VMSDELTQEYLGSLRVPTLVLYGDRDQHGKRVSEKLGKIPTSRVVMIEEASHPAYIDQPDVFHELMYNFLR 345          
BLAST of mRNA_H-elongata_contig20024.5640.1 vs. uniprot
Match: UPI0001CBC155 (alpha/beta hydrolase domain-containing protein 14B-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBC155)

HSP 1 Score: 141 bits (355), Expect = 6.880e-35
Identity = 74/170 (43.53%), Postives = 111/170 (65.29%), Query Frame = 3
Query:   90 NVLLLHGTRFSAQTWQDLGTISLLVGAGYRVVAVDLHMYSTYPPRDVLLERICYALGMSEA---NPTVIVSPSMSGSFSVPLLLRNPRLFAGYVPVAPGIAGEHSTEEFAAVTGVPALIVYGEKDS-MGARVSNILSAIPGSHLVMIEGAGHPAYLDEPDLFHEYLLEFL 587
            +VLLLHG RF++Q W D+GT+  ++  GYR VAVDL  Y      ++ +++  + L + +A     +VIVSPSMSG+F++PLL+++P +F GYVPVAP     +S +++  +  VP  IVYGE D+  G +  N L  +P S + +IEGAGHPA+LD+P  +H  +  FL
Sbjct:   64 SVLLLHGKRFTSQNWFDIGTLQHMIRFGYRAVAVDLPGYGLSKDVELTVDKGEFLLNIIKALKLEHSVIVSPSMSGTFALPLLMKHPEVFRGYVPVAPVETELYSADQYGKIQ-VPTFIVYGEHDTDFGQKSMNNLKNLPNSRIYVIEGAGHPAWLDQPITWHNLMYNFL 232          
BLAST of mRNA_H-elongata_contig20024.5640.1 vs. uniprot
Match: A0A3B1KBY6_ASTMX (Abhydrolase domain containing 14B n=2 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A3B1KBY6_ASTMX)

HSP 1 Score: 140 bits (353), Expect = 6.990e-35
Identity = 77/178 (43.26%), Postives = 110/178 (61.80%), Query Frame = 3
Query:   93 VLLLHGTRFSAQTWQDLGTISLLVGAGYRVVAVDL----HMYSTYPPRDV-------LLERICYALGMSEANPTVIVSPSMSGSFSVPLLLRNPRLFAGYVPVAPGIAGEHSTEEFAAVTGVPALIVYGEKDSMGARVS-NILSAIPGSHLVMIEGAGHPAYLDEPDLFHEYLLEFLK 590
            VLLLHG RFS++ W  +GT+S L GAG R VAVDL       +  PP  V        L+++C  LG     P V++SPS+SG +S+P LL++      Y+PVAP    + + E++  V  VP LIVYG++D+    VS   LS +P   +V+++GAGHP YLD+P+ +H+ +LEFLK
Sbjct:   38 VLLLHGIRFSSENWVSIGTLSCLAGAGLRAVAVDLPGLGQSKAAEPPAPVGEPAPGEFLKQVCEGLG---TGPVVVISPSLSGMYSLPFLLQHTHQLKAYIPVAPICTNKFTAEQYRDVQ-VPTLIVYGDQDTQLGEVSLKNLSNLPNHRVVVMKGAGHPCYLDDPETWHKSILEFLK 211          
BLAST of mRNA_H-elongata_contig20024.5640.1 vs. uniprot
Match: A0A8C5J7G6_JUNHY (Abhydrolase domain containing 14A n=4 Tax=Passeriformes TaxID=9126 RepID=A0A8C5J7G6_JUNHY)

HSP 1 Score: 141 bits (355), Expect = 9.490e-35
Identity = 76/186 (40.86%), Postives = 110/186 (59.14%), Query Frame = 3
Query:   63 SSTTAPGAPNVLLLHGTRFSAQTWQDLGTISLLVGAGYRVVAVDLHMYSTYPP---------RDVLLERICYALGMSEANPTVIVSPSMSGSFSVPLLLRNPRLFAGYVPVAPGIAGEHSTEEFAAVTGVPALIVYGEKDS-MGARVSNILSAIPGSHLVMIEGAGHPAYLDEPDLFHEYLLEFLK 590
            ++   PG P+VL LHG  F+++TW+ LGT++LL G GYR VA+DL  Y   PP         R   L+R+   LGM      V++SPSMSG FS+P LL +    AG+VP+AP    + + E++ AV   P LI+YG+ D+ +  +    L  +P   + ++ GAGH  YLD+P+ FH  LL FL+
Sbjct:   65 AAAAGPGRPDVLFLHGQAFTSKTWEALGTLALLAGEGYRAVAIDLPGYGDSPPMEMALTAQGRRAFLDRVLQELGMQRP---VLISPSMSGRFSLPFLLAHGDRLAGFVPIAPVGTKDFTAEQYRAVQ-TPTLILYGDHDTGLAPQALQNLQHLPKHRVAVLSGAGHACYLDKPEEFHRALLGFLR 246          
BLAST of mRNA_H-elongata_contig20024.5640.1 vs. uniprot
Match: A0A2E5YRI1_9DELT (Alpha/beta hydrolase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E5YRI1_9DELT)

HSP 1 Score: 140 bits (353), Expect = 1.910e-34
Identity = 81/182 (44.51%), Postives = 114/182 (62.64%), Query Frame = 3
Query:   60 VSSTTAPGAPNVLLLHGTRFSAQTWQDLGTISLLVGAGYRVVAVDLHMYSTYPPRDVLLE----RICYALGMSEANPTVIVSPSMSGSFSVPLLLRNPRLFAGYVPVAPGIAGEHSTEEFAAVTGVPALIVYGEKDSM--GARVSNILSAIPGSHLVMIEGAGHPAYLDEPDLFHEYLLEFL 587
            +++  A G P VLLLHG  FS++TWQ LGTI LL  AGYRV+A+DL  +   P R V        +   LG+      V+VSPSMSG FS+PL+ ++P+  AGYVP+AP  + E + E     + VPAL+ +GEKD +   A+   +  +   + ++++ GAGHPAYLD+P  FHE LLEF+
Sbjct:   69 ITAGPAEGRP-VLLLHGAAFSSKTWQGLGTIDLLAKAGYRVIAIDLPGFGKSPNRRVDARSFGVELLAHLGIDRV---VVVSPSMSGRFSLPLVRQHPKRLAGYVPIAPVGSIEFAKEP--KKSPVPALVTWGEKDGLFPPAQAKRLAQSFEEAEVLILPGAGHPAYLDQPKRFHEALLEFI 244          
BLAST of mRNA_H-elongata_contig20024.5640.1 vs. uniprot
Match: A0A800KMA9_9BACT (Alpha/beta hydrolase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800KMA9_9BACT)

HSP 1 Score: 138 bits (347), Expect = 7.600e-34
Identity = 79/178 (44.38%), Postives = 111/178 (62.36%), Query Frame = 3
Query:   78 PGAPNVLLLHGTRFSAQTWQDLGTISLLVGAGYRVVAVDLHMY----STYPPRDVLLERICYALGMSEANPTVIVSPSMSGSFSVPLLLRNPRLFAGYVPVAPGIAGEHSTEEFAAVTGVPALIVYGEKDSMG--ARVSNILSAIPGSHLVMIEGAGHPAYLDEPDLFHEYLLEFLKN 593
            P AP +LLLHG RFS++TW++LGT+  L  AG RVVAVDL  Y    ST       L ++  ALG+      V+V+PSMSG+F+ P +L +     G+VPVAP     H  E   +   VP L+++G  DS+   A   ++ +AIP + L++ +GA HPAYLD+PDLFHE LL F+++
Sbjct:   56 PDAPALLLLHGARFSSETWRELGTLEHLASAGLRVVAVDLPGYGGSTSTELEAGKFLAQLVEALGLERP---VVVAPSMSGAFAFPFVLDHGASCGGFVPVAPAAVARH--EARLSEIRVPTLVMWGTADSVFPVAGAESLAAAIPDAGLLLFKGAPHPAYLDQPDLFHERLLAFVRS 228          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20024.5640.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCA9_ECTSI2.620e-7362.75Abhydrolase domain containing 14B n=2 Tax=Ectocarp... [more]
A0A6J0HPJ9_9PASS5.550e-3641.49protein ABHD14A n=9 Tax=Passeriformes TaxID=9126 R... [more]
A0A2E6D702_9BACT8.100e-3644.69Alpha/beta hydrolase n=1 Tax=Planctomycetes bacter... [more]
A0A2G8KXK4_STIJA8.730e-3643.65Putative alpha/beta hydrolase domain-containing pr... [more]
A0A7R9BXC4_9CRUS1.500e-3542.86Hypothetical protein n=1 Tax=Notodromas monacha Ta... [more]
UPI0001CBC1556.880e-3543.53alpha/beta hydrolase domain-containing protein 14B... [more]
A0A3B1KBY6_ASTMX6.990e-3543.26Abhydrolase domain containing 14B n=2 Tax=Astyanax... [more]
A0A8C5J7G6_JUNHY9.490e-3540.86Abhydrolase domain containing 14A n=4 Tax=Passerif... [more]
A0A2E5YRI1_9DELT1.910e-3444.51Alpha/beta hydrolase n=1 Tax=Deltaproteobacteria b... [more]
A0A800KMA9_9BACT7.600e-3444.38Alpha/beta hydrolase n=1 Tax=Planctomycetes bacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20024contigH-elongata_contig20024:3735..6331 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score181.0
Seed ortholog evalue3.9e-43
Seed eggNOG ortholog2880.D8LCA9
KEGG koko:K13706
EggNOG free text desc.positive regulation of transcription by RNA polymerase II
EggNOG OGs2QR0B@2759,COG0596@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01002
Hectar predicted targeting categoryother localisation
Exons2
Model size1691
Cds size432
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20024.5640.1prot_H-elongata_contig20024.5640.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig20024 4794..6131 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930128.1236458-UTR-H-elongata_contig20024:3734..47931622930128.1236458-UTR-H-elongata_contig20024:3734..4793Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20024 3735..4793 -
1691679291.82033-UTR-H-elongata_contig20024:3734..47931691679291.82033-UTR-H-elongata_contig20024:3734..4793Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20024 3735..4793 -
1622930128.1656706-UTR-H-elongata_contig20024:6131..63311622930128.1656706-UTR-H-elongata_contig20024:6131..6331Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20024 6132..6331 -
1691679291.8526165-UTR-H-elongata_contig20024:6131..63311691679291.8526165-UTR-H-elongata_contig20024:6131..6331Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20024 6132..6331 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930128.135714-CDS-H-elongata_contig20024:4793..52141622930128.135714-CDS-H-elongata_contig20024:4793..5214Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20024 4794..5214 -
1691679291.8322904-CDS-H-elongata_contig20024:4793..52141691679291.8322904-CDS-H-elongata_contig20024:4793..5214Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20024 4794..5214 -
1622930128.15027-CDS-H-elongata_contig20024:6120..61311622930128.15027-CDS-H-elongata_contig20024:6120..6131Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20024 6121..6131 -
1691679291.842938-CDS-H-elongata_contig20024:6120..61311691679291.842938-CDS-H-elongata_contig20024:6120..6131Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20024 6121..6131 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig20024.5640.1

>prot_H-elongata_contig20024.5640.1 ID=prot_H-elongata_contig20024.5640.1|Name=mRNA_H-elongata_contig20024.5640.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=144bp
MYSTYPPRDVLLERICYALGMSEANPTVIVSPSMSGSFSVPLLLRNPRLF
AGYVPVAPGIAGEHSTEEFAAVTGVPALIVYGEKDSMGARVSNILSAIPG
SHLVMIEGAGHPAYLDEPDLFHEYLLEFLKNDVFQEEKYRGWL*
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mRNA from alignment at H-elongata_contig20024:3735..6331-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig20024.5640.1 ID=mRNA_H-elongata_contig20024.5640.1|Name=mRNA_H-elongata_contig20024.5640.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2597bp|location=Sequence derived from alignment at H-elongata_contig20024:3735..6331- (Himanthalia elongata Himel1 dioecious)
AGGGGGGATTCATCTACGTTCTCGGCAAAGCGATAAAGTTCCTAGGCAAC CTGGGGGTCGTTTCCTCGACCACAGCGCCTGGAGCGCCCAACGTGCTCCT TCTTCACGGCACCAGATTTTCGGCCCAGACTTGGCAAGACTTGGGCACGA TCTCGCTCTTGGTGGGCGCCGGGTACAGGGTGGTTGCGGTGGATCTTCAC ATGTACTCAACGTGAGTCCTTCGAGACTTGAACTTTTGCCCCTGTGTCAC CTAAGATGCATTTCTTATTTTATAAGGCACATTGAAATCTTATCACGTCG TTATGTATGTATGTATGTATGTATGTATGTATGTATGGTCATCACATATA GTAGAGTAAGATCAACCGGATTTGGTTGCCTCCTGTTCGTGGTCAGCTGA ACAGGGAAAATAATTTCCTCCTGGTCCCGTTCGCGCCTGAGCATTTGGTC TCGCGAGACGGGTTCAGCAGTCCCGTCCCGCGTCAACCTGCTCATTCTCT CAGTTCAGGCTTAATATGTTGTGTACTCCCGGGATCCTCTCGATTCTCTC GTTTTCCGCGACGGCGTCTATCTCTACCGTCAACCGCCATCGGGCCAATC CCGATTTAATCACGTCACGTAATTGCGTGTCGATGGCGTTTACTACCGAG AGTCCGCCGGCACTGAGCCAATAGTCCTCAAGGTAGCTTGAGTAACGGGT GCAGCCTATTGAGGTAATCCCATGGAACAATTATTGTGCGCCTCCCTTTT TCCACACCTACTATGGGTAAGGTGGATATGTGCGATACAGTCACAGACAG CATCGGAGGCGAGATCAGTCTTAAATTGGTACTATCACGTTGGATACAAT ATTAGCATATACATAAACGCGACATCGATCCTATTTGGATCGAGGAACAC GCGACTACGATGCTTAGCGTCGCAGCTCTTCAGCCGTATGTTTAACTGAT GTATAGTATGTGCTTTGAAATGAGGTCAAGGGGCTCCAGGCAAAGAAGAG ACCGAAGGGAGATTCTCGTACGGTAACGGGGCTGCTCCTGTTGCTCGTTC GTTGCCGTTACAAGCTCCTCTCTGCGTATTTCCATTGTTTTTACTTTTTG CCACTATCCTTACGAAGGTACCCGCCACGAGATGTGCTTCTGGAGCGCAT TTGCTACGCTCTCGGCATGTCGGAGGCGAATCCGACCGTAATCGTATCCC CCTCCATGAGCGGATCCTTTTCCGTTCCGCTACTCTTGCGGAATCCAAGG CTATTCGCCGGATATGTTCCGGTCGCCCCTGGTATCGCTGGAGAGCACTC GACCGAGGAATTCGCTGCGGTCACTGGAGTTCCCGCGCTTATCGTCTACG GCGAGAAGGACTCGATGGGGGCACGGGTTTCGAATATACTCTCCGCAATT CCAGGGTCGCACTTGGTGATGATCGAAGGAGCTGGTCACCCCGCGTATCT CGATGAACCGGATCTGTTCCACGAGTACCTGCTTGAATTCTTAAAAAATG ACGTTTTTCAGGAAGAAAAGTACAGGGGGTGGCTCTAGAGAGGAAATTGT ACGTACTGTACCTGACGCTTTTTTCTGTTGGATTTTTATTGTGGGGTAGA AAGTGTGCTTTACGTTTACCACCACACCCATGTTAACGGTATTGAGCGGC GTGTTTCACTGATGTTAGGACTTTTTCATGCCTTCTCTTGTAGTGCACGA GCAGTACACCCCGCGGGGCGACACTGGGCTTAACCCAGTCAAAACATACT CTAACGCACGCGAAGAGCGAGTTGGCCCACATAAGCCTCCACTACGATAT GCCAGATATGCCGGATGGCTCAATCTCTGCCAAGAATCAGGTTGGACCGA TTGAGGAATCAGTCAGCTAGGATCTTGAGTATCCCATCTCGTAATGATCT TATCGCAATGAAAACATATTTCCATTCCGAAAAATGCTTTGTTTACTATG CTTAAGTAGGTACCGGTATGCTGTAGCAGGGTCCACTTTGCCCCCAAATA ATCCTTTGGGTTGGGAACAACTGTAGCCACAGGACGGCCGCCGACTAATG AGAGACGTGTTGGTGCCGTACAAATATTATTTAGGCGTTGTGGAACGATG TGTAGCTCCTCGTGCAGATTTCGCTACAGAGTGGATCGTTGCCCTGATTC AGAGCATCCAAAATTTAGAATTTCGATAAATAATGTGCGATATATATACT ATGTAATAGTCTCCTGAGTGGCCTAGCTCTAATTTATAAACACGTGATAT GTTAGTAGTGTGGAAATCATGAGTTAGATCCTAGATTCCTATAAGGAAGA AGCGGAAAGCGTTTAACATGGGAAGTAAGCAAAGTGATGATGATATACGT TTGCAGACAACGGTCGTCTCTGTATAAACTGCAAGTATATCGTGGGCTGG TCACTGGTGTGTTGCCCACAAGCAGAGGTGTACACCAGAGTGGAGTTGGA ACCCTCAGCGTGTCTCGAAACGAAGAGATATAGAATATATATTTTTATTA CTGACTGACTCCCAGGTCCGGTTTGCTTCACGGAGGTAAAGAGGAGAAGT GAACAAGGGTGCGAGCCCGTTCAACAAAGTTCGCAAAAACAATGTAG
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Coding sequence (CDS) from alignment at H-elongata_contig20024:3735..6331-

>mRNA_H-elongata_contig20024.5640.1 ID=mRNA_H-elongata_contig20024.5640.1|Name=mRNA_H-elongata_contig20024.5640.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=864bp|location=Sequence derived from alignment at H-elongata_contig20024:3735..6331- (Himanthalia elongata Himel1 dioecious)
ATGTACTCAACATGTACTCAACGTACCCGCCACGAGATGTGCTTCTGGAG
CGCATTTGCTACGCTCTCGGCATGTCGGAGGCGAATCCGACCGTAATCGT
ATCCCCCTCCATGAGCGGATCCTTTTCCGTTCCGCTACTCTTGCGGAATC
CAAGGCTATTCGCCGGATATGTTCCGGTCGCCCCTGGTATCGCTGGAGAG
CACTCGACCGAGGAATTCGCTGCGGTCACTGGAGTTCCCGCGCTTATCGT
CTACGGCGAGAAGGACTCGATGGGGGCACGGGTTTCGAATATACTCTCCG
CAATTCCAGGGTCGCACTTGGTGATGATCGAAGGAGCTGGTCACCCCGCG
TATCTCGATGAACCGGATCTGTTCCACGAGTACCTGCTTGAATTCTTAAA
AAATGACGTTTTTCAGGAAGAAAAGTACAGGGGGTGGCTCTAGGTACCCG
CCACGAGATGTGCTTCTGGAGCGCATTTGCTACGCTCTCGGCATGTCGGA
GGCGAATCCGACCGTAATCGTATCCCCCTCCATGAGCGGATCCTTTTCCG
TTCCGCTACTCTTGCGGAATCCAAGGCTATTCGCCGGATATGTTCCGGTC
GCCCCTGGTATCGCTGGAGAGCACTCGACCGAGGAATTCGCTGCGGTCAC
TGGAGTTCCCGCGCTTATCGTCTACGGCGAGAAGGACTCGATGGGGGCAC
GGGTTTCGAATATACTCTCCGCAATTCCAGGGTCGCACTTGGTGATGATC
GAAGGAGCTGGTCACCCCGCGTATCTCGATGAACCGGATCTGTTCCACGA
GTACCTGCTTGAATTCTTAAAAAATGACGTTTTTCAGGAAGAAAAGTACA
GGGGGTGGCTCTAG
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