mRNA_H-elongata_contig19491.5424.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig19491.5424.1
Unique NamemRNA_H-elongata_contig19491.5424.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig19491.5424.1 vs. uniprot
Match: A0A6H5KW72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW72_9PHAE)

HSP 1 Score: 665 bits (1717), Expect = 1.360e-224
Identity = 364/599 (60.77%), Postives = 423/599 (70.62%), Query Frame = 1
Query:    4 GKLPPNSLVRYRGMVQDQYEPEYFVGSFEEVNTATGQRSQVDVKYVDSIPQRAGFVNEFEGPNAKTVQRLPVFCIPVPGQSPWAQPTPRADRKQEGGLQQVGDGGAGEPTKRSREAEGA------------DGMDCTVKSSSGTNATILDDEPQGPVPSPLVKVKRTTAHEA----ALNESSLRNAETKSAVAGAFHHGQELDLAGLPCVVKLYDYQEGDLKLNDIAEFVGVLGYDQ---PLPSHEEAPMG-------SDNPFQGMDGFIRKVPPPSLAPRLHCIFYRAITACDPLVVDPKQPKDALHALQGPLPFGAFMLDTKRQAIAHLASALGGDALAAEYSLLTLLSRAYVRTESSAPGSLSLNLRGMSADHVPALHAAVAKLVPKCVTIPITTQSLSEMFKFAPKKDYEADRLMVSSLQLSEGTVVILDETRLESGPVGAEGIHNISALKSLTSRQKIPYDFGFYKTDFDVDHPTIAVSSRGSVVPMGAVVS--VDVSGEIPIVSHS-ATLARLRVYVEATRRMDLALDEVSSSFAEEDFVKARQQGHALTGDDFHRMLTIARLTALSLGEGMMNASHWNHMKDLEARVAGRAQ 1713
            GKL  NSLVRYRGMVQDQYEPEYFVGSFEE+ TATG+R++VDVKYVDSI QR GFVNE++GP AKT+ RLP+FC+P+PGQS WA P  + ++                                       D MDCT        A    D+   P P  L      T+  A    A   SS   A         FHH QE++LAGL CVVK+YD++EG +KLND+ EFVGVLGYDQ   P    E+ PMG       + NPFQG++ F RKVPPPSLAPRLHC+F+R + AC PL+VDPKQP+DAL ALQGPLPF  FM + K++ I HLA AL GD LAAEY LL LLSRAYVRTES APGSLSLNLRG+  D  P  HAAV+ LVPKCVT+P+TT+SLSE FKF+PKKDYEADRLM+SSLQLS+GTVV+LDET LE G VG EG+ N++AL SL S QK+PYDFGFYK DF+VDHPTI++S+RGSVVP GAVV   VD  G     S   A LARLRVY+EATRR +L+LDE SS+ AEEDFVKARQQG A+TG+DFHRMLTIARLTALSLG+  M ASHW+HMKDLEARVA R Q
Sbjct:   75 GKLAANSLVRYRGMVQDQYEPEYFVGSFEELETATGKRNRVDVKYVDSIAQRPGFVNEYDGPGAKTMDRLPLFCVPIPGQSQWAIPPNQGEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAMDCTADEIGDAEAAS-GDKNGAPKPKTLRAAAGPTSEGARTPHADGHSSSVAASNDQRPNSTFHHEQEIELAGLACVVKMYDFREGQIKLNDMTEFVGVLGYDQAVTPPQEDEDVPMGEGGAGGATGNPFQGLEDFSRKVPPPSLAPRLHCVFHRQLPACTPLMVDPKQPQDALRALQGPLPFSVFMRNAKQETIKHLAKALRGDVLAAEYVLLALLSRAYVRTESLAPGSLSLNLRGVRPDDAPGFHAAVSNLVPKCVTVPVTTKSLSEKFKFSPKKDYEADRLMMSSLQLSDGTVVVLDETSLEPGQVGTEGVTNLAALNSLMSLQKVPYDFGFYKMDFEVDHPTISLSARGSVVPAGAVVPIVVDACGGTSYGSEDEALLARLRVYLEATRRTELSLDEKSSALAEEDFVKARQQGQAITGEDFHRMLTIARLTALSLGDEAMTASHWSHMKDLEARVAARVQ 672          
BLAST of mRNA_H-elongata_contig19491.5424.1 vs. uniprot
Match: D8LEY8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEY8_ECTSI)

HSP 1 Score: 344 bits (883), Expect = 1.110e-105
Identity = 192/349 (55.01%), Postives = 226/349 (64.76%), Query Frame = 1
Query:    1 QGKLPPNSLVRYRGMVQDQYEPEYFVGSFEEVNTATGQRSQVDVKYVDSIPQRAGFVNEFEGPNAKTVQRLPVFCIPVPGQSPWAQPTPRADRKQEGGLQQVGDGGAGEPTKRSREAEGA--DGMDCTVKSSSGTNATILDDEPQGPVPSPLVKVKRTTAHEA----ALNESSLRNAETKSAVAGAFHHGQELDLAGLPCVVKLYDYQEGDLKLNDIAEFVGVLGYDQ---PLPSHEEAPMG-------SDNPFQGMDGFIRKVPPPSLAPRLHCIFYRAITACDPLVVDPKQPKDALHALQGPLPFGAFMLDTKRQAIAHLASALGGDALAAEYSLLTLLSRAYVRTE 999
            QGKL  NSLVRYRGMVQDQYEPEYFVGSFEE+ TATG+R++VDVKYVDSI QR GFVNE++GP AKT+ RLP+FC+P+PGQS WA P  +                                D MDCT        AT   D+   P P  L      ++  A    A   SS   A  +      FHH QE+DL GL CV+K+YD++EG +KLND AEFVGVLGYDQ   P    E+ PMG       + NPFQG++ F RKVPPPSLAPRLHC+F+R + AC PL+VDPKQP+DAL ALQGPLPFG FM + K++ I HLA AL GD LAAEY+LL LLSRAYVRTE
Sbjct:    2 QGKLAANSLVRYRGMVQDQYEPEYFVGSFEELETATGKRNRVDVKYVDSIAQRPGFVNEYDGPGAKTMDRLPLFCVPIPGQSQWAIPPNQGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAMDCTADEIGDAEATS-GDKNSAPKPKTLRAAAGPSSEGARTPNADGHSSSVTASNEQRPNSTFHHEQEIDLDGLACVIKMYDFREGQVKLNDTAEFVGVLGYDQAVTPPQEDEDVPMGEGGAGGATGNPFQGLEDFSRKVPPPSLAPRLHCVFHRQLRACTPLMVDPKQPQDALRALQGPLPFGVFMRNAKQETIKHLARALRGDVLAAEYALLALLSRAYVRTE 349          
BLAST of mRNA_H-elongata_contig19491.5424.1 vs. uniprot
Match: A0A1Y1IQF2_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IQF2_KLENI)

HSP 1 Score: 261 bits (667), Expect = 4.740e-72
Identity = 194/586 (33.11%), Postives = 292/586 (49.83%), Query Frame = 1
Query:   10 LPPNSLVRYRGMVQDQYEPEYFVGSFEEVNTATGQRSQVDVKYVDSIPQRAGFVNEFEGPNAKTVQRLPVFCIPVPGQSPWAQPTPRADRKQEGGLQQVGDGGAGEPTKRSREAEGADGMDCTVKSSSGTNATILDDEPQGPVPSPLVKVKRTTAHEAALNESSLRNAETKSAVAGAFHHGQELDLAGL--PCVVKLYDYQEGDLKLNDIAEFVGVLGYDQPLPSHEEAPMGSDNPFQGM-------DGFIRKVPP-----PSLAPRLHCIFYRAITACDPLVVDPKQPKDALHALQGPLPFGAFMLDTKRQAIAHLASALGGDALAAEYSLLTLLSRAYVRTESSAPGSLSLNLRGMSADHVPA-------LHAAVAKLVPKCVTIPITTQSLSEMFKFAPKKDYEADRLMVSSLQLSEGTVVILDETRLESGPVGAEGIHNISALKSLTSRQKIPYDFGFYKTDFDVDHPTIAVSSRGSVVPMGAVVSVDVS-----GEIPIVSHSATLARLRVYVEATRRMDLALDEVSSSFAEEDFVKARQQGHALTGDDFHRMLTIARLTALSLGEGMMNASHWNHMKDLE 1689
            LP  +LVR++GMVQD ++PEY+VG+F+E  ++T   +    KY D        V    GP+A+  +R  ++C+P+PGQS W++ T        G  ++          KR R+ E     +  ++       +I +            + KR        + S + N ET     G    G  L L  L  PC+VK+YD  +  LKLND+AEFVG+L +D  L +     +G   P  GM       D    ++PP     PS  PRL CI+   +    P +  P     A  A +  L   A  L  +  A++ L  ALGGD LAA+Y LLTLLS+   R E  A G L+LNL G  A   P        L +A+  LVP C  +P++   L+      P+KDY  +RL+ + LQL+ GTV+++DET L+ G   A G+ N+ AL+ L   QK+ YDF +Y  D   D P +A+S   S++P    + +  +       +P     A L  LR Y+   R+++  + E ++   E+D V AR+   +LT  DFHR LT+ARLT++S GE  ++ S W  ++++E
Sbjct:   68 LPSGTLVRFQGMVQDMFDPEYYVGAFKETPSSTWHTT----KYTDVYD-----VPIASGPDAQVWERKLLYCVPIPGQSDWSRGTRPTSLNGPGAHRE----------KRPRDDEEMSIAEPMLEEGEAGQESIGE------------QAKRQRE----ASSSGMSNNETGGC--GLLGEGMNLPLPSLLLPCLVKVYDDADAGLKLNDVAEFVGILTFDPQLAA--AGSVGRGEPASGMPGEGAAGDSLDEELPPSLRLSPSKVPRLQCIYLHKLPTLVPGLPPPASLAHAAAAQE--LAQSASAL--RACAVSLLTVALGGDTLAAQYLLLTLLSKVTGRAEPMAVGKLALNLVGCPAASPPGASPLASVLRSALPALVPACHLLPLSLDLLNRA-PLVPRKDYTLNRLVAAPLQLAAGTVLVVDETALQPGTASATGVRNLQALQHLVEWQKLEYDFQWYTVDVLTDVPVLALSEARSLLPADVTLPLRQTRTATWAPLP----DAELVALRRYLGLARQLEHTIGEATTKAIEDDLVAARKGDPSLTSQDFHRWLTLARLTSVSYGESSLSMSRWESVREME 605          
BLAST of mRNA_H-elongata_contig19491.5424.1 vs. uniprot
Match: D8LEY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEY9_ECTSI)

HSP 1 Score: 243 bits (619), Expect = 4.860e-70
Identity = 126/181 (69.61%), Postives = 147/181 (81.22%), Query Frame = 1
Query: 1180 MVSSLQLSEGTVVILDETRLESGPVGAEGIHNISALKSLTSRQKIPYDFGFYKTDFDVDHPTIAVSSRGSVVPMGAVVSVDVS---GEIPIVSHSATLARLRVYVEATRRMDLALDEVSSSFAEEDFVKARQQGHALTGDDFHRMLTIARLTALSLGEGMMNASHWNHMKDLEARVAGRAQ 1713
            M+SSLQLS+GTVV+LDET LE G VG EG+ N++AL SL S QK+PYDFGFYK DF+VDHPTI++S+RGSVVP GAVV V V    G        A LARLR+Y+EATRR +L+LD+ SS+ AEEDFVKARQQG A+TG+DFHRMLTIARLTALSLG+  M ASHW+HMKDLEARVA R Q
Sbjct:    1 MMSSLQLSDGTVVVLDETSLEPGQVGTEGVTNLAALNSLMSLQKVPYDFGFYKMDFEVDHPTISLSARGSVVPAGAVVPVVVDACGGTSSGSEDQALLARLRIYLEATRRTELSLDDKSSALAEEDFVKARQQGQAVTGEDFHRMLTIARLTALSLGDEAMTASHWSHMKDLEARVAARVQ 181          
BLAST of mRNA_H-elongata_contig19491.5424.1 vs. uniprot
Match: A0A6P8IAV9_ACTTE (Mini-chromosome maintenance complex-binding protein n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IAV9_ACTTE)

HSP 1 Score: 252 bits (644), Expect = 6.480e-69
Identity = 191/582 (32.82%), Postives = 281/582 (48.28%), Query Frame = 1
Query:    7 KLPPNSLVRYRGMVQDQYEPEYFVGSFEEVNTATGQRSQVDVKYVDSIPQRAGFVNEFEGPNAKTVQRLPVFCIPVPGQSPWAQPTPRADRKQEGGLQQVGDGGA-----GEPTKRSREAEGADGMDCTVKSSSGTNATILDDEPQGPVPSPLVKVKRTTAHEAALNESSLRNAETKSAVAGAFHH---GQELDLAGLPCVVKLYDYQEGDLKLNDIAEFVGVLGYDQPLPSHEEAPMGSDNP-------FQGMDGFIRKVPPPSLAPRLHCIFYRAITACDPLVVDPKQPKDALHALQGPLPFGAFMLDTKRQAIAHLASALGGDALAAEYSLLTLLSRAYVRTESSAPGSLSLNLRG--MSADHVPALHAAVAKLVPKCVTIPITTQSLSEMFKFAPKKDYEADRLMVSSLQLSEGTVVILDETRLESGPVGAEGIHNISALKSLTSRQKIPYDFGFYKTDFDVDHPTIAVSSRGSVVPMGAVVSVDVSG---EIPIVSHSATLARLRVYVEATRRMDLALDEVSSSFAEEDFVKARQQGHA-LTGDDFHRMLTIARLTALSLGEGMMNASHWNHMKDLE 1689
            KL PNSLV++R MVQD + PEYF+  +E V+   G+       Y D      G    FE     T ++   FC+P+PG++ WA+         EG  ++  + G      G+  KRS E +     D   +   G     ++   QG   +   KV    A+E A   SS       SA+  + +H   G+     G  C+V +YD  E D+KLND+ EF+G++       +  E      +P       F   +      PP SL PRLHC+FY+ +   +P +     P DA       L     +   +   +  L S L GD LAAEY LL L+S  Y R    A G  SLNL G  M       +   + +++PKCV + +T  +++ +  F PKKDY+A+RL+   LQLS+ T +ILDET LE+G +   G+ N++AL SL S QK+ YDF FYKTDF  +   + +S   S++P    + ++ S    E P+      L   R Y+   R    ++        +EDFV+ARQ+  + +T DDFHR L +ARL A+S G   +    W  +K LE
Sbjct:   55 KLRPNSLVKFRCMVQDMFGPEYFLSEYEIVSKTRGETKMRSGMYRDMADCPQGHEANFESARNVTAEKHSYFCVPIPGETEWAK---------EGFARKSANHGTKAPQTGQSNKRSLEED----EDMEQEQGDGVLEEGIETS-QGDAQNKKSKV----ANEIAQESSS-------SAMVTSLNHPIPGEN----GPSCIVHVYDKCE-DIKLNDMVEFIGIVSIQPHFATFTEEKSEESSPMVLTADSFMSEEEHAAHYPPTSLVPRLHCVFYQHLKHSNPSI-----PLDADEKTSDSLL--PQVARARGDLLFMLKSLLLGDELAAEYLLLHLVSSVYTRCGIMAVGKFSLNLCGCPMEPSFTKRISDTLKQVLPKCVNMQMTLNNMNTL-NFVPKKDYKANRLISGILQLSDSTQLILDETALEAGQLNTNGVQNVTALGSLISWQKLEYDFDFYKTDFKSNIQVLVLSEGKSMLPCDCHIKIETSSSQQESPVNMSEDLLNMFRTYIGLVRLSSYSITPAMQKALQEDFVQARQRNPSTMTADDFHRHLLVARLMAVSSGSSTLTQELWEKVKKLE 598          
BLAST of mRNA_H-elongata_contig19491.5424.1 vs. uniprot
Match: A7RN02_NEMVE (Mini-chromosome maintenance complex-binding protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7RN02_NEMVE)

HSP 1 Score: 250 bits (639), Expect = 4.340e-68
Identity = 197/598 (32.94%), Postives = 294/598 (49.16%), Query Frame = 1
Query:   10 LPPNSLVRYRGMVQDQYEPEYFVGSFEEVNTATGQRSQVDVKYVDSIPQRAGFVNEFEGPNAKTVQRLPVFCIPVPGQSPWAQPT--PRADRKQEGGLQQVGDGGAGEPTKRSREAEGADGMDCTVK-------SSSGTNATILDDEPQGPVPSPLVKVKRTTAHEAALNESSLRNAETKSAVAGAFHHGQELDLAGLPCVVKLYDYQEGDLKLNDIAEFVGVLGYDQPLPSHE-EAPMGSDNPFQGMDGFI----RKV--PPPSLAPRLHCIFYRAITACDPLVVDPKQPKDALHALQGPLPFGAFMLDTKRQAIAHLASALGGDALAAEYSLLTLLSRAYVRTESSAPGSLSLNLRGMSADHVPALHAAVAKLV--------PKCVTIPITTQSLSEMFKFAPKKDYEADRLMVSSLQLSEGTVVILDETRLESGPVGAEGIHNISALKSLTSRQKIPYDFGFYKTDFDVDHPTIAVSSRGSVVPMGAVVSVDVSGE-------IPIVSHSATLARLRVYVEATRRMDLALDEVSSSFAEEDFVKARQQGHA-LTGDDFHRMLTIARLTALSLGEGMMNASHWNHMKDLEARVAGR 1707
            L PNSLVR+R MVQD + PEYF+  +E  + +TG+       Y D +        +F  P   T ++   +C+P+PG++ WA+     R+   Q GG  Q+         KRS E +  +G   T +       S SGT+             S +   K+T   E    ++S  N  T +  +  F    E    G  C+V LY+ Q  ++KLND  EF+G+L     L S   EAP  SD  F   D  +    R V  PPPSL PRLHC+  R +   +P  +     +D+L +L  P+      L  +   +A L   L GD LAAEY LL LLS  Y R+   A G  ++NL G+       L   ++  V        PKC  +P+T  +L+ +  F PKKDY  DRLM   LQLS GT ++LDET +E+G + A G+ N+++L +L S QK+ YDF FYKT+F VD   + +S   S++P    V +D           +  ++HS  + ++R Y+   R  + ++        +EDFV  RQQ    ++ DDFH  L +ARL ++S G+  +    W  +K++E++   R
Sbjct:   57 LKPNSLVRFRCMVQDMFGPEYFLSQYEVKSKSTGETVLASGLYRDVVDCSGDLEVDFNSPKCVTSEKQTYYCVPIPGETEWAKQAFAERSPLVQHGGPSQLS-----MSNKRSLEDDEMEGDHTTAQQHEDLRTSPSGTSGDC----------SQIQDPKKTRTEE---TKASTNNIATTAMPSLNFPLPGE---QGPACLVHLYE-QCDNIKLNDTLEFIGILSVHPSLASTPGEAP--SDPSFITADDVMCQEERAVHHPPPSLVPRLHCLVARPMKHSNP-TMPTVLAEDSLKSLTPPV------LHVRDDLLAALEKLLCGDRLAAEYLLLHLLSTVYTRSGVMAVGKFAINLSGLPTQQTLPLEERISSQVAKFLKHVLPKCHLLPMTLNNLNSL-NFIPKKDYTKDRLMSGMLQLSNGTELVLDETAMEAGQLNATGVQNVTSLGNLMSWQKLAYDFNFYKTEFMVDIKVLVMSEGKSLLPSDCQVKLDPQRSADSADTVLNNINHSV-IEKMRCYLGLLRFAEYSVSPEMQKVLQEDFVSVRQQTDGKMSADDFHLHLLLARLLSISYGQVPLTNEVWAKVKNMESKRRAR 621          
BLAST of mRNA_H-elongata_contig19491.5424.1 vs. uniprot
Match: A0A2N9EVE8_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EVE8_FAGSY)

HSP 1 Score: 249 bits (636), Expect = 6.200e-68
Identity = 180/570 (31.58%), Postives = 279/570 (48.95%), Query Frame = 1
Query:   10 LPPNSLVRYRGMVQDQYEPEYFVGSFEEVNTATGQRSQVDVKYVDSIPQRAGFVNEFEGPNAKTVQRLPVFCIPVPGQSPWAQPTPRADRKQEGGLQQVGDGGAGEPTKRSR-EAEGADGMDCTVKSSSGTNATILDDEPQGPVPSPLVKVKRTTAHEAALNESSLRNAETKSAVAGAFHHGQELDLAGLPCVVKLYDYQEGDLKLNDIAEFVGVLGYDQPLPSHEEAPMGSDNPFQGMDGFIRKVP---PPSLAPRLHCIFYRAITACDPLVVDPKQPKDALHALQGPLPFGAFMLDTKRQAIAHLASALGGDALAAEYSLLTLLSRAYVRTESSAPGSLSLNLRGMSADHVPA----LHAAVAKLVPKCVTIPITTQSLSEMFKFAPKKDYEADRLMVSSLQLSEGTVVILDETRLESGPVGAEGIHNISALKSLTSRQKIPYDFGFYKTDFDVDHPTIAVSS-RGSVVPMGAVVSVDVSG-EIPIVSHSATLARLRVYVEATRRMDLALDEVSSSFAEEDFVKARQQGHALTGDDFHRMLTIARLTALSLGEGMMNASHWNHMKDLE 1689
            + PN+LVR+RGM+QD    E++VG +++  +       +DV +       +   ++ +       +R  ++C+PVPGQ+ W +P+       E  + +  D  +    KR R + E  D MD  V           DD  QG   SP  K  +   H    + SS         +          D   LPC+VK+YD  E DLKLND+ EF+GVL +D       E P+  D+  +  +GF        PP+  PRLHC+ +R +T             D LH+     P      + +   + HL + LG D+ AA + LL LLSR + R ++ A G LSLNL G S + V      L  AV  L+P    IP+T + L+     APKKDYE +RL+   LQL+EG+ +I+DET+LESG + + G+ N + LK+L   QK+ YDF +YK +   D   + +S  + +++P   V+    S  +   V  +  L   R Y+   + +  +++       E+D V+ARQ    +   DF+R LT+ RL ++S GE  ++  HW  +K+LE
Sbjct:   69 VQPNTLVRFRGMIQDMLGNEFYVGVYKD-GSVWRTNKFMDVSHFPMPSSSSSSSSDMQ-----VWERRLLYCVPVPGQNSWTEPS------SESAMNRCVDCTSQPREKRRRMDDEPVDNMDMVVS----------DDGCQG---SPCTKKMKEDGHP---SMSSQTQEAINEGICSHMSVVPNTDRDSLPCLVKIYDSPESDLKLNDVFEFIGVLTFDS------EVPVDKDDHDELSNGFSEDALAHLPPNKVPRLHCLIHRKLTV-----------PDFLHSSPTMEPKPHLFKEIRAALLRHLTAVLGNDSFAAHFMLLHLLSRVHTRVDTLAVGKLSLNLTGFSKESVSLFGHRLSHAVKDLLPFTHCIPLTVEYLNSA-SLAPKKDYETNRLITGVLQLAEGSHLIIDETQLESGTLNSVGVENATLLKNLMELQKVEYDFKYYKMEMAADVQMLIISEGKSNILPADIVIPFQPSSVDSSEVVAAEALEAWRWYLATVKSLPHSIESEMQKVVEDDLVEARQTDRTIGSRDFNRWLTMGRLMSVSFGETSLSLEHWQMVKELE 592          
BLAST of mRNA_H-elongata_contig19491.5424.1 vs. uniprot
Match: A0A1R3H007_COCAP (Mini-chromosome maintenance complex-binding protein n=2 Tax=Corchorus TaxID=93758 RepID=A0A1R3H007_COCAP)

HSP 1 Score: 247 bits (630), Expect = 2.880e-67
Identity = 182/570 (31.93%), Postives = 278/570 (48.77%), Query Frame = 1
Query:   10 LPPNSLVRYRGMVQDQYEPEYFVGSFEEVNTATGQRSQVDVKYVDSIPQRAGFVNEFEGPNAKTVQRLPVFCIPVPGQSPWAQPTPRADRKQEGGLQQVGDGGAGEPTKRSREAEGADGMDCTVKSSSGTNATILDDEPQGPVPSPLVKVKRTTAHEAALNESSLRNAETKSAVAGAFHHGQELDLAGLPCVVKLYDYQEGDLKLNDIAEFVGVLGYDQPLPSHEEAPMGSDNPFQGMDGFIRKVPPPSLAPRLHCIFYRAITACDPLVVDP-KQPKDALHALQGPLPFGAFMLDTKRQAIAHLASALGGDALAAEYSLLTLLSRAYVRTESSAPGSLSLNLRGMSADHVPALHAAVAK----LVPKCVTIPITTQSLSEMFKFAPKKDYEADRLMVSSLQLSEGTVVILDETRLESGPVGAEGIHNISALKSLTSRQKIPYDFGFYKTDFDVDHPTIAVSS-RGSVVPMGAVVSVDVSG----EIPIVSHSATLARLRVYVEATRRMDLALDEVSSSFAEEDFVKARQQGHALTGDDFHRMLTIARLTALSLGEGMMNASHWNHMKDLE 1689
            + PN+LVRYRGM+QD    E++VG+F++ N           K+ D      G       P+    +R  ++C+PVPGQS W +P+   D       Q           +R  + E AD MD            + DD+ +    SP  K  R     + L E+      +  +   +F   Q++D   LPC+VK+YD  E +LKLND+ EF+GVL +D  LP  ++     D+   G+        PP+  PRLHC  +R +   D L   P  +PK  L            + + +     HL + LG D +AA + LL LLS+ + R +  A G LSLNL G+S + +      +++    L+P   +IP+T + L+     APKKDY+A+RL+   LQL EG+ + +DET+L+SG + + G+ N + LK+L+  QK+ YDF +YK +   D   +  S  + ++VP   VV    S     E P+   +  L   R Y+   R +  ++        E+D V ARQ    L   DF R LT+ARL + S GE  ++  HW  +K+LE
Sbjct:   68 VQPNTLVRYRGMIQDMLGNEFYVGAFKDGNLWRTN------KFTDVSQYPMG-----SSPDMCVWERRLLYCVPVPGQSSWTEPS--CDMGPNWSSQT-------REKRRRMDDEDADPMDL-----------VPDDDIKS---SPTTKKMREDGFPSPLPEAMESKPGSSGSSMSSF---QQVDKDNLPCLVKIYDTPELELKLNDVFEFIGVLTFDSELPVEKDDNEDLDDAMVGL--------PPNKVPRLHCFIHRKLAVHDFLQGSPIMEPKPHL------------VKEIREALFRHLTAVLGNDGVAAHFMLLHLLSKVHARVDDVAVGKLSLNLTGLSKESMSVFGTRISQAFKDLLPFTHSIPLTLEYLNAA-SLAPKKDYQANRLIPGVLQLPEGSHLTVDETQLQSGTLNSNGVENTNVLKTLSEFQKVEYDFQYYKMEMAADVQLLIFSEGKSNIVPADVVVPFQPSSLESSETPV---AEPLEAWRWYLATVRSLPHSIGSEMQKVVEDDLVAARQANRNLGSQDFSRWLTMARLVSTSFGETNLSLEHWQLVKELE 576          
BLAST of mRNA_H-elongata_contig19491.5424.1 vs. uniprot
Match: I6UEI0_BETVU (E2F target protein 1 n=1 Tax=Beta vulgaris TaxID=161934 RepID=I6UEI0_BETVU)

HSP 1 Score: 247 bits (630), Expect = 3.360e-67
Identity = 184/574 (32.06%), Postives = 292/574 (50.87%), Query Frame = 1
Query:   10 LPPNSLVRYRGMVQDQYEPEYFVGSFEEVNT-ATGQRSQVDVKYVDSIPQRAGFVNEFEGPNAKTVQRLPVFCIPVPGQSPWAQPTPRADRKQEGGLQQVGDGGAGEPTKRSR-EAEGADGMDCTVKSSSGTNATILDDEPQGPVPSPLVKVKRTTAH--EAALNESSLRNAETKSAVAGAFHHGQELDLAGLPCVVKLYDYQEGDLKLNDIAEFVGVLGYDQPLP-SHEEAPMGSDNPFQGMDGFIRKVPPPSLAPRLHCIFYRAITACDPLVVDPKQPKDALHALQGPLPFGAFMLDTKRQAIAHLASALGGDALAAEYSLLTLLSRAYVRTESSAPGSLSLNLRGMSAD----HVPALHAAVAKLVPKCVTIPITTQSLSEMFKFAPKKDYEADRLMVSSLQLSEGTVVILDETRLESGPVGAEGIHNISALKSLTSRQKIPYDFGFYKTDFDVDHPTIAVSS-RGSVVPMGAVV----SVDVSGEIPIVSHSATLARLRVYVEATRRMDLALDEVSSSFAEEDFVKARQQGHALTGDDFHRMLTIARLTALSLGEGMMNASHWNHMKDLE 1689
            + PN+LVR+RGM+QD    E++ G +++ +T  T + S V    +D  P            + +  +R  ++C+PVPG + WA+P      +Q+    Q       +  KR R + E AD MD                  QG + SP+ K  R   H   +A+ +  L    T S          + +    PC+VK+YD  E +L+LN+I EF+GVL +D  L  + EEA + S++ ++  D  I    PPS  PR+HC+ ++ +   D + V P    + L            + +T+   + +L + LG D +AA+Y LL LLSR + R +  A G LSLN   +S +     V  L  A+ +L+P    IP+T + L+     APKKDYEA++L+   LQL+EG+ + +DET+L+SG + + G+ N  +LK+LT  Q++ YDF +YK +   D   + +S  + +++P   V+    S  VS EI   +  A L   R Y+   R +  ++        EED V ARQ   +L   DF R+LT++RL +LS GE  ++  HW  +K+LE
Sbjct:   68 IQPNTLVRFRGMIQDMLGNEFYAGVYKDGSTWRTNKYSDVSQVQMDFSP------------DMRLWERRLLYCVPVPGLNSWAEPLEVLSNQQKILASQ-------QREKRPRNDDEAADHMDLESN--------------QGCLDSPVTKKMREEGHPSSSAMQQDMLNEGTTPS------FRLPDSEKNPFPCLVKVYDSPESELRLNEIFEFIGVLSFDSELELNKEEADLQSNSLYE--DDLIHL--PPSKVPRIHCLVHKKLAVNDFVNVSPMTELNPL-----------LIRETREVLLRYLTAVLGNDGVAAQYLLLHLLSRVHARVDGVAVGKLSLNFTSISQETASVFVSRLSLAMKELLPFTQHIPLTIEYLNNA-TLAPKKDYEANKLVSGVLQLAEGSHLTVDETKLQSGTLNSTGVENTRSLKNLTEVQQVEYDFKYYKMEMAADVQLLVLSEGKSNILPTDLVLPFQPSSTVSSEI---TDEAMLQSWRWYLATMRSLPHSISPEMQKVVEEDLVAARQADRSLGSHDFSRLLTMSRLMSLSFGETSLSMEHWQMVKELE 583          
BLAST of mRNA_H-elongata_contig19491.5424.1 vs. uniprot
Match: A0A200RAE0_9MAGN (Mini-chromosome maintenance complex-binding protein n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200RAE0_9MAGN)

HSP 1 Score: 244 bits (622), Expect = 2.170e-66
Identity = 185/578 (32.01%), Postives = 287/578 (49.65%), Query Frame = 1
Query:    4 GKLPPNSLVRYRGMVQDQYEPEYFVGSFEEVNTATGQRSQVDVKYVD--SIPQRAGFVNEFEGPNAKTVQRLPVFCIPVPGQSPWAQPTPRADRKQEGGLQQVGDGGAGEPTKRSREAE-GADGMDCTVKSSSGTNATILDDEPQGPVPSPLVKVKRTTAHEAALNESSLRNAETKSAVAGAFHHGQELDLAGLPCVVKLYDYQEGDLKLNDIAEFVGVLGYDQPLPSHEEAPMGSDNPFQGMDGFIRKVPPPSLAPRLHCIFYRAITACDPLVVDPKQPKDALHALQGPLPFGAFMLDTKRQAIAHLASALGGDALAAEYSLLTLLSRAYVRTESSAPGSLSLNLRGMSADHVPA----LHAAVAKLVPKCVTIPITTQSLSEMFKFAPKKDYEADRLMVSSLQLSEGTVVILDETRLESGPVGAEGIHNISALKSLTSRQKIPYDFGFYKTDFDVDHPTIAVSS-RGSVVPMGAVVSVDVSGEIPIVSHSA-TLARLRVYVEATRRMDLALDEVSSSFAEEDFVKARQQGHALTGDDFH-------RMLTIARLTALSLGEGMMNASHWNHMKDLE 1689
            G++ PNSLVR+RGMVQD +  E +VG+F++ +T          K+ D  S P  +           +  +R  ++C+PVPGQSPW   +  +    E  + + G+       KR RE +   D MD  V         IL    +  +P    + + +     +  +S + + +TKS                LPC+VK+YD  E +LKLND+ EFVGV  +D  L  HE+   GSD    G+        PP+  PRLHC  +R +   D LV  P         +  P+P    +   +   + +L + LG D +AA+  LL LLS+ + R ++ A G LSLNL G S + V      L+ A+  L+P   ++P+T ++L+     APKKDY+ +RL+  +LQL+EGT + LDET+L +G + + GI N+  LK+L   QK+ YDF +YK +   D   + +S  + +++P   V+    S     V+    +L   R Y+   R +   +D       E+D V ARQ+  +L  +DF        R LT+ARL + S GE  ++  HW  +K+LE
Sbjct:   28 GRIQPNSLVRFRGMVQDMFGNELYVGAFKDGSTWRTN------KFTDVASFPMSSST-------ETRIWERRLLYCVPVPGQSPWVVQSSDSASSSETVINRCGNWTPQHGEKRRREDDMSVDQMDLNV-------CPILLFIREDGLPCQASQSQESVIGGTSPIQSMVPDFDTKS----------------LPCLVKIYDSPESELKLNDVFEFVGVFTFDPELMVHED---GSDEFSSGLCEDTLVHLPPNKVPRLHCFIHRKLAVHDFLVGSP---------VNEPMP--NLVRGIRESLLRYLTAVLGNDGVAAQCVLLHLLSQVHARVDAIAVGKLSLNLTGFSRESVSVFGNQLNIAIQSLLPFTQSMPLTVENLNTA-SLAPKKDYQTNRLLAGTLQLAEGTHLTLDETQLNAGILNSTGIENVRLLKNLMDLQKVEYDFEYYKLEMSSDVQLLILSEGKSNILPADLVLPFQPSVVASSVNADGDSLQAWRWYLATLRSLPHVIDTELQKVIEDDLVAARQEDRSLGSNDFSSGYLELFRWLTMARLMSASFGETSLSLEHWQMVKELE 554          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19491.5424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KW72_9PHAE1.360e-22460.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEY8_ECTSI1.110e-10555.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1Y1IQF2_KLENI4.740e-7233.11Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
D8LEY9_ECTSI4.860e-7069.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6P8IAV9_ACTTE6.480e-6932.82Mini-chromosome maintenance complex-binding protei... [more]
A7RN02_NEMVE4.340e-6832.94Mini-chromosome maintenance complex-binding protei... [more]
A0A2N9EVE8_FAGSY6.200e-6831.58Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A1R3H007_COCAP2.880e-6731.93Mini-chromosome maintenance complex-binding protei... [more]
I6UEI0_BETVU3.360e-6732.06E2F target protein 1 n=1 Tax=Beta vulgaris TaxID=1... [more]
A0A200RAE0_9MAGN2.170e-6632.01Mini-chromosome maintenance complex-binding protei... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19491contigH-elongata_contig19491:1583..7060 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score327.4
Seed ortholog evalue1.3e-86
Seed eggNOG ortholog2880.D8LEY8
Preferred nameMCMBP
KEGG koko:K06997
GOsGO:0000228,GO:0000278,GO:0000785,GO:0000790,GO:0000819,GO:0003674,GO:0003682,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016043,GO:0022402,GO:0031974,GO:0031981,GO:0032991,GO:0033260,GO:0034641,GO:0034645,GO:0042555,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044786,GO:0046483,GO:0051276,GO:0070013,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0098813,GO:1901360,GO:1901576,GO:1902969,GO:1903047
EggNOG free text desc.sister chromatid cohesion
EggNOG OGsKOG2545@1,KOG2545@2759
Ec32 ortholog descriptionMini-chromosome maintenance complex-binding protein
Ec32 orthologEc-21_006060.1
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Hectar predicted targeting categoryother localisation
Exons8
Model size3139
Cds size1743
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19491.5424.1prot_H-elongata_contig19491.5424.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig19491 1625..5706 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930108.101168-UTR-H-elongata_contig19491:1582..16241622930108.101168-UTR-H-elongata_contig19491:1582..1624Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19491 1583..1624 +
1691679283.3119862-UTR-H-elongata_contig19491:1582..16241691679283.3119862-UTR-H-elongata_contig19491:1582..1624Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19491 1583..1624 +
1622930108.2737148-UTR-H-elongata_contig19491:5706..70601622930108.2737148-UTR-H-elongata_contig19491:5706..7060Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19491 5707..7060 +
1691679283.4052408-UTR-H-elongata_contig19491:5706..70601691679283.4052408-UTR-H-elongata_contig19491:5706..7060Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19491 5707..7060 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930108.1196175-CDS-H-elongata_contig19491:1624..17911622930108.1196175-CDS-H-elongata_contig19491:1624..1791Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19491 1625..1791 +
1691679283.3216758-CDS-H-elongata_contig19491:1624..17911691679283.3216758-CDS-H-elongata_contig19491:1624..1791Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19491 1625..1791 +
1622930108.1597326-CDS-H-elongata_contig19491:2084..22681622930108.1597326-CDS-H-elongata_contig19491:2084..2268Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19491 2085..2268 +
1691679283.3291764-CDS-H-elongata_contig19491:2084..22681691679283.3291764-CDS-H-elongata_contig19491:2084..2268Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19491 2085..2268 +
1622930108.174781-CDS-H-elongata_contig19491:2926..33141622930108.174781-CDS-H-elongata_contig19491:2926..3314Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19491 2927..3314 +
1691679283.3417733-CDS-H-elongata_contig19491:2926..33141691679283.3417733-CDS-H-elongata_contig19491:2926..3314Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19491 2927..3314 +
1622930108.189068-CDS-H-elongata_contig19491:3761..39791622930108.189068-CDS-H-elongata_contig19491:3761..3979Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19491 3762..3979 +
1691679283.3572216-CDS-H-elongata_contig19491:3761..39791691679283.3572216-CDS-H-elongata_contig19491:3761..3979Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19491 3762..3979 +
1622930108.2019029-CDS-H-elongata_contig19491:4293..44521622930108.2019029-CDS-H-elongata_contig19491:4293..4452Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19491 4294..4452 +
1691679283.3662152-CDS-H-elongata_contig19491:4293..44521691679283.3662152-CDS-H-elongata_contig19491:4293..4452Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19491 4294..4452 +
1622930108.2171044-CDS-H-elongata_contig19491:4603..46961622930108.2171044-CDS-H-elongata_contig19491:4603..4696Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19491 4604..4696 +
1691679283.3746943-CDS-H-elongata_contig19491:4603..46961691679283.3746943-CDS-H-elongata_contig19491:4603..4696Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19491 4604..4696 +
1622930108.2321205-CDS-H-elongata_contig19491:4905..52381622930108.2321205-CDS-H-elongata_contig19491:4905..5238Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19491 4906..5238 +
1691679283.3836617-CDS-H-elongata_contig19491:4905..52381691679283.3836617-CDS-H-elongata_contig19491:4905..5238Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19491 4906..5238 +
1622930108.257399-CDS-H-elongata_contig19491:5505..57061622930108.257399-CDS-H-elongata_contig19491:5505..5706Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19491 5506..5706 +
1691679283.394779-CDS-H-elongata_contig19491:5505..57061691679283.394779-CDS-H-elongata_contig19491:5505..5706Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19491 5506..5706 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig19491.5424.1

>prot_H-elongata_contig19491.5424.1 ID=prot_H-elongata_contig19491.5424.1|Name=mRNA_H-elongata_contig19491.5424.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=581bp
MVQDQYEPEYFVGSFEEVNTATGQRSQVDVKYVDSIPQRAGFVNEFEGPN
AKTVQRLPVFCIPVPGQSPWAQPTPRADRKQEGGLQQVGDGGAGEPTKRS
REAEGADGMDCTVKSSSGTNATILDDEPQGPVPSPLVKVKRTTAHEAALN
ESSLRNAETKSAVAGAFHHGQELDLAGLPCVVKLYDYQEGDLKLNDIAEF
VGVLGYDQPLPSHEEAPMGSDNPFQGMDGFIRKVPPPSLAPRLHCIFYRA
ITACDPLVVDPKQPKDALHALQGPLPFGAFMLDTKRQAIAHLASALGGDA
LAAEYSLLTLLSRAYVRTESSAPGSLSLNLRGMSADHVPALHAAVAKLVP
KCVTIPITTQSLSEMFKFAPKKDYEADRLMVSSLQLSEGTVVILDETRLE
SGPVGAEGIHNISALKSLTSRQKIPYDFGFYKTDFDVDHPTIAVSSRGSV
VPMGAVVSVDVSGEIPIVSHSATLARLRVYVEATRRMDLALDEVSSSFAE
EDFVKARQQGHALTGDDFHRMLTIARLTALSLGEGMMNASHWNHMKDLEA
RVAGRAQGSGVERAPQAAGTTPLNAIPEDA*
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mRNA from alignment at H-elongata_contig19491:1583..7060+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig19491.5424.1 ID=mRNA_H-elongata_contig19491.5424.1|Name=mRNA_H-elongata_contig19491.5424.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5478bp|location=Sequence derived from alignment at H-elongata_contig19491:1583..7060+ (Himanthalia elongata Himel1 dioecious)
CAGGGTAAACTGCCGCCGAATTCTCTGGTACGCTACCGGGGTATGGTGCA AGACCAGTACGAGCCCGAGTACTTCGTAGGTTCGTTCGAGGAAGTCAACA CGGCCACGGGCCAGCGCTCTCAAGTAGACGTGAAGTACGTGGACAGCATA CCGCAGAGGGCGGGTTTTGTCAACGAGTTCGAGGGACCAAATGCCAAGAC CGTTCAACGGTTAGTTATTGTAGCTAAGAAGCATGAGGGTTTGTATGTAT ATGAGGGGGGAGTTGGGGGGGGGTCATCGTTCTTTTAGAAACACGCCTCT GTGGGATGTCTTTTTGGAACACAATTTCTACCGCATCGTAAGTCGTGCGG ATCTCGCTCTATACACTGAATTGTGACGTAATATCCGTGCGACTTCTTCA CGGACTTGATCGCTGGGAGCGACGAAACGTGGGCGCAATCACGACATCTT CAACCGCTCGCTCTGGTTTTCGCCGCTACGATCGTTTGCGTCTCCGCGAC AGGTTGCCCGTATTCTGTATTCCCGTGCCGGGTCAGTCGCCCTGGGCGCA GCCCACGCCTCGGGCGGACAGGAAGCAAGAGGGGGGTTTGCAACAAGTAG GCGACGGCGGTGCTGGAGAACCGACAAAACGCTCGCGGGAAGCAGAAGGG GCAGATGGCATGGATTGCACGGTAAAATCCTCTAGCGTTCTCCGCGCTGC GTGGGTGTTTTACACTTACATGCAGCTTCTACACACATTACGTATGCACA CAGATCAATGCGTGTAGCCTAGAAGAGCTAGCATGACAGAGCCGGATTGC GCGGTTATATGCAATTTAATAAATACACATACACACACACACAAACAAGG AAGCAGAAAAGTAAGCGCAAGTTATTGATTATTGATTATTGATTATTGAT GGCTTAGATACGAAATGTAGATAGAGTATGTCTCCTTTGTCACGTCTGAT CATTAATAGAGGTTTTTGTAGCGAAATATTATTGATCCCCTATTGGGAGG ATCAATGCGAGAGTAGCCTAGAAGGACTATGACTAGCATGAAAGGGTTGG ATTGCGCGGTTATGTGCAATTTAATAAAAAAAAAAGACACACCACACACG CAAACAAAAGGTGCATGATTGTGTCAAATATCTTTTGTGACGTGTTTTGG ATGTTACTTACGGTGTTTCTGGATGTGGATGCAATGCTAATCTGTGCGAT GCGGTACGAGACAAGATCGACGCTGCTCCACGGAAGCATCGAGTTTACGT ACTTCCCCACCTCGACCGCCGCGTTCTCCATGAAAGAAGGGTCGCAGCCT TTGTTTCTCAAACCCCATCGACCATACCTCGCGTGTCTCAGGAGGGCACA AACGCAACCATCCTGGACGACGAGCCTCAGGGGCCCGTCCCCAGCCCCCT GGTGAAGGTTAAGCGCACCACGGCGCACGAAGCGGCGCTGAACGAAAGCT CGTTAAGAAACGCCGAGACGAAGAGCGCCGTGGCAGGCGCGTTTCACCAT GGACAAGAGCTGGACCTGGCAGGTCTGCCATGTGTCGTGAAGCTGTACGA TTACCAAGAGGGGGACTTGAAACTGAACGATATTGCCGAGTTCGTGGGCG TGCTCGGGTACGACCAGCCTTTGCCCTCCCACGAGGAGGCCCCGATGGGG TCCGACAATCCGTTTCAAGGGATGGATGGTTTTATCAGGAAGGTTCCTCC GCCTAGTCTTGCGCCACGGCTCCACTGCATATGTGAGAAAAAGGCTTCGC GCGCGCGAACGAGACCCTGGACAGCCGTGAAGACCGTTGCTCGCGGGCGT TTGAGCCGCGTTGTTTTGGTGTGGAAATCCCGAAGGTTGGCGTTGATGTG GTCGCCCGGATCATCGTTTTTTCTTCGCGCAAGGTTTTTCCTCCCTGCAC GTTTTACTTTTGAAAGCCTTAGATTAAATTATAGTGTTCCGTGCCGTATC GAAGTCAGAGACGGAGGTAGAGCAATCAAATAATAAGGGGGAGGGAAGCG TATGAAACTGTCCCCTACCGGGGATCTAATCGTCGTATCCCCGGTGGTGC TTCATATGGGATACGTGATCACCGTACAATAGGGGATGGATATGTTTTAT CTCCAGAAGGGGGCGGAATTAACCTGTCCCTCCCCAAATCGGGGATCTCT TATAATTTCTTCGCCACGTTTCGCCGCAGTCTATCGCGCGATCACCGCGT GCGATCCTCTGGTCGTGGACCCGAAACAGCCGAAGGATGCCCTGCACGCG CTGCAGGGGCCGCTGCCGTTTGGCGCATTCATGCTCGACACCAAGCGTCA GGCGATCGCGCACCTGGCCAGTGCTCTCGGCGGTGACGCCCTTGCTGCCG AGTACTCCCTCTTGACTCTCTTATCTCGGGCCTACGTGCGGACTGAGGTG CGGCCGCGTTTCACGCTCTTCGCGTTGGTGTTTCTCCTACCGTATGGCAC TCGTCGAGCTCTTCCGAACGTCTGATACGCGGTATTTAGAGCACGTGCTA GTATATGACTTCCTGGGGTTAAATCGGGCTTGGCAGAATATACAGGCACG GTATTTTGTTTTGGCACGATGTGTGGTTACGGTCCCTGCGCTCAGCAGAT AGCGTTCGGAAGGTCCGGTTTAATTGGTGCACGGGAAACACATCGAGGTT GTTTTTTTATTTTTAATGTTGTGCAACCTAACACTCTCCACTGCGCTTGG CTTTCGTTCAGTCCTCGGCGCCCGGTAGCTTGAGTCTCAACCTACGCGGC ATGTCAGCGGATCATGTGCCTGCACTTCACGCCGCTGTTGCCAAACTGGT ACCCAAGTGCGTGACGATACCGATCACGACCCAGTCTCTGTCCGAGATGT TCAAGTTCGCCCCTAAGAAGGTGAGGGCTTCATGGCGGGAGTTGTTTCGT GTTTTGAGGCATTGCAAAGACTCTCAACGGCGTATTACAGCCAGAGAATG TGACGCGAGTAACGCCAACCTACGATTTCGAGTTAAAGGCCCCTCTCTCC CCCCCCCATCCGTGTGGACAGGATTACGAGGCGGATCGGCTGATGGTGTC AAGCTTACAGCTGTCGGAAGGTACCGTCGTGATTTTGGACGAAACAAGAC TAGAGTCTGGACCGGTGCGTTTGTACGTGTGCTTTGCAGGCAGTGAGCGG ACGAGCGCAACCCTCGATATTGCCCAGTTCACCGGATCTCGTCAAGGGTC GGTACAGAAGTGCGCCTCGAAGCTTGTGTTAAGTGATCTCGATTTCGTGT TAAGACACATGGACTGAGTTCTGCTGAATTGGGTGGTGCCCTCCCGGCCG GTGCTCGTCCGCGTTCCCTCCAGGTTGGCGCCGAAGGCATCCACAATATC TCGGCGCTTAAGTCGCTGACTTCCAGGCAGAAAATACCATACGATTTTGG GTTCTACAAGACGGATTTCGACGTGGATCATCCGACCATTGCGGTGTCGT CGCGTGGATCTGTAGTCCCGATGGGTGCGGTAGTATCCGTTGACGTCAGC GGCGAAATCCCTATCGTTTCGCATTCCGCGACGCTGGCGAGATTGCGCGT TTACGTGGAAGCAACTCGACGGATGGACTTGGCTCTGGACGAGGTGTCTT CGTCTTTCGCGGAGGAAGATTTTGTCAAGGCCAGACAGCAGGGCCACGCC CTGACGGTACGATATGTGGTTACGATGATGGTTCTGCGGTGTAGGAGGGC GATATTTTTTAGATATATCTGTGTGGCGTAATCTTCTGCCGTGTGGACGA GAGGTATCTACGAAGGCGCCGCTTCTCTTTGTACGTGACTCAATGCTTTC TATGAGGAAAGCGCGCACGTTTCCCCTCCGGCTTGCTTCCTATGCGCCGA CTTCCACCGGCAACCGTGCATACTATATAGTCAACGATGTCTATCCCGCT GTTGTTGTTCTGCCTCAAAACAGGGAGATGATTTTCACCGGATGCTGACC ATTGCAAGGCTAACCGCGCTGTCTCTGGGCGAAGGCATGATGAACGCGTC GCACTGGAACCACATGAAGGATCTAGAAGCGCGGGTGGCGGGGCGTGCTC AGGGGTCGGGCGTGGAGAGAGCTCCTCAAGCTGCAGGCACAACTCCCCTA AACGCGATTCCGGAAGATGCGTGACTCCTGCGCGCGGACGCGCTTGGTTT ATTTCTGTGACTTCTGGAGCGGGGGGGAAGAGGGGGGATTAGAGTCGAAA TGCGATAAAAGGCGCGATCCCGCTCTGCTGTTTCGTGACATTCCGCGGAG AAGAGTAGCGTGGGTGGTAACATGCCTTCTCTCTTCCTGTCGGCCCTGTT CATACAGTTCACGTCAAAAGACTGTAGAATATGGTGGAGAGGAAACGATT CTCTTAAAGTTGTCTCTGAGCGTGCGTGTGGGTCTTGAGGACAGGGTGAT TTCTACCGTACGGGGCTAAAGAAGCTCTGGAGGAATTGCTGACTACCGGT ATGTTTCATGGATGGAGAGGTGCCGAAACGTGTGAGTTGGCAGTAGCACC TGTCAGAGCAAGCTGTACATACCTGTACATGACTCATGCGCGGTGGTTTC GATTGTAGTCAACGTACGTGTTGTTTGAAGCAAGATAGCAATAGCTCTTG CACGCATGCTGTATAAGATAAGAGGGTTCGAAACGGTGAAAGAAAAAGAC CCAGCATTTATCGGACGATAGTTGGTTCTCTGGATTGTACCTGAGAAAGT CTGGATGTTCGGAGGGTTGGAATGAGTTCTTATGTCCTTTTAGAAAAGCT GTAAGTTCACTTTCTTTATAATGGCTGAAAAAAAAACGTCCTTGTATTTT TCAGTGATATCGGTTACGACATCGACCCGTCCGTAACTTTATTTTTTGCC GTAACTTCAAGGGGGCTCCACGGAATTGTAGACCCCCCTACCTAAGGGGG CCCCGCTTGCACAGAACACGTCGTCACACAGCATCGGCACAGCACAGCAC AGCACCCCACAGTCCCAGCGGCAGCAGCTCACACATGGATGGCGGCAGTG GCCTATCCTGGGGATCGCTCGTGTATCAGACAGCGGGGGATAAAGGGGTT CGTGCAGGTCTGCTCACGTTTGTAGATTTGATCAACCCGAACCCAGCAGC CGAGACGAGTACAGTTGTCACATGCAAAGTGTGCAAGAAAAAGTTTACGG GCACCAAAGAAAGACTGGCAGCTCAATTCGCCGGCGTCAAGAACCATGGT GTAGATATCTGTACGAACCCTTCTAGTGAGGCCGCCACTCTTGGCAAGCA AGTTCTTGGGAAGATAGAGACTTCACGGAAGGCAAACAAGAAGCAGAAGA CCAACGACGCCGCGATGGCCTCCACGCAAATGGATATTCAGCGGATCTTC GACGCCAAGGGCTTTGTTGGGCTTCATTTGCGCTTTTCTGGCGGATACTG CTTCTACGGGGGTCCCGGTGTTGCCGTAACTGGCATACGTAACTCTAATT GACCAAAATAAGCAATTACGTGTACGTA
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Coding sequence (CDS) from alignment at H-elongata_contig19491:1583..7060+

>mRNA_H-elongata_contig19491.5424.1 ID=mRNA_H-elongata_contig19491.5424.1|Name=mRNA_H-elongata_contig19491.5424.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3486bp|location=Sequence derived from alignment at H-elongata_contig19491:1583..7060+ (Himanthalia elongata Himel1 dioecious)
ATGGTGCAAGACCAGTACGAGCCCGAGTACTTCGTAGGTTCGTTCGAGGA
AGTCAACACGGCCACGGGCCAGCGCTCTCAAGTAGACGTGAAGTACGTGG
ACAGCATACCGCAGAGGGCGGGTTTTGTCAACGAGTTCGAGGGACCAAAT
GCCAAGACCGTTCAACGATGGTGCAAGACCAGTACGAGCCCGAGTACTTC
GTAGGTTCGTTCGAGGAAGTCAACACGGCCACGGGCCAGCGCTCTCAAGT
AGACGTGAAGTACGTGGACAGCATACCGCAGAGGGCGGGTTTTGTCAACG
AGTTCGAGGGACCAAATGCCAAGACCGTTCAACGGTTGCCCGTATTCTGT
ATTCCCGTGCCGGGTCAGTCGCCCTGGGCGCAGCCCACGCCTCGGGCGGA
CAGGAAGCAAGAGGGGGGTTTGCAACAAGTAGGCGACGGCGGTGCTGGAG
AACCGACAAAACGCTCGCGGGAAGCAGAAGGGGCAGATGGCATGGATTGC
ACGGTAAAATCCTCTAGCGTTGCCCGTATTCTGTATTCCCGTGCCGGGTC
AGTCGCCCTGGGCGCAGCCCACGCCTCGGGCGGACAGGAAGCAAGAGGGG
GGTTTGCAACAAGTAGGCGACGGCGGTGCTGGAGAACCGACAAAACGCTC
GCGGGAAGCAGAAGGGGCAGATGGCATGGATTGCACGGTAAAATCCTCTA
GCGGCACAAACGCAACCATCCTGGACGACGAGCCTCAGGGGCCCGTCCCC
AGCCCCCTGGTGAAGGTTAAGCGCACCACGGCGCACGAAGCGGCGCTGAA
CGAAAGCTCGTTAAGAAACGCCGAGACGAAGAGCGCCGTGGCAGGCGCGT
TTCACCATGGACAAGAGCTGGACCTGGCAGGTCTGCCATGTGTCGTGAAG
CTGTACGATTACCAAGAGGGGGACTTGAAACTGAACGATATTGCCGAGTT
CGTGGGCGTGCTCGGGTACGACCAGCCTTTGCCCTCCCACGAGGAGGCCC
CGATGGGGTCCGACAATCCGTTTCAAGGGATGGATGGTTTTATCAGGAAG
GTTCCTCCGCCTAGTCTTGCGCCACGGCTCCACTGCATATGGCACAAACG
CAACCATCCTGGACGACGAGCCTCAGGGGCCCGTCCCCAGCCCCCTGGTG
AAGGTTAAGCGCACCACGGCGCACGAAGCGGCGCTGAACGAAAGCTCGTT
AAGAAACGCCGAGACGAAGAGCGCCGTGGCAGGCGCGTTTCACCATGGAC
AAGAGCTGGACCTGGCAGGTCTGCCATGTGTCGTGAAGCTGTACGATTAC
CAAGAGGGGGACTTGAAACTGAACGATATTGCCGAGTTCGTGGGCGTGCT
CGGGTACGACCAGCCTTTGCCCTCCCACGAGGAGGCCCCGATGGGGTCCG
ACAATCCGTTTCAAGGGATGGATGGTTTTATCAGGAAGGTTCCTCCGCCT
AGTCTTGCGCCACGGCTCCACTGCATATTCTATCGCGCGATCACCGCGTG
CGATCCTCTGGTCGTGGACCCGAAACAGCCGAAGGATGCCCTGCACGCGC
TGCAGGGGCCGCTGCCGTTTGGCGCATTCATGCTCGACACCAAGCGTCAG
GCGATCGCGCACCTGGCCAGTGCTCTCGGCGGTGACGCCCTTGCTGCCGA
GTACTCCCTCTTGACTCTCTTATCTCGGGCCTACGTGCGGACTGAGTCTA
TCGCGCGATCACCGCGTGCGATCCTCTGGTCGTGGACCCGAAACAGCCGA
AGGATGCCCTGCACGCGCTGCAGGGGCCGCTGCCGTTTGGCGCATTCATG
CTCGACACCAAGCGTCAGGCGATCGCGCACCTGGCCAGTGCTCTCGGCGG
TGACGCCCTTGCTGCCGAGTACTCCCTCTTGACTCTCTTATCTCGGGCCT
ACGTGCGGACTGAGTCCTCGGCGCCCGGTAGCTTGAGTCTCAACCTACGC
GGCATGTCAGCGGATCATGTGCCTGCACTTCACGCCGCTGTTGCCAAACT
GGTACCCAAGTGCGTGACGATACCGATCACGACCCAGTCTCTGTCCGAGA
TGTTCAAGTTCGCCCCTAAGAAGTCCTCGGCGCCCGGTAGCTTGAGTCTC
AACCTACGCGGCATGTCAGCGGATCATGTGCCTGCACTTCACGCCGCTGT
TGCCAAACTGGTACCCAAGTGCGTGACGATACCGATCACGACCCAGTCTC
TGTCCGAGATGTTCAAGTTCGCCCCTAAGAAGGATTACGAGGCGGATCGG
CTGATGGTGTCAAGCTTACAGCTGTCGGAAGGTACCGTCGTGATTTTGGA
CGAAACAAGACTAGAGTCTGGACCGGATTACGAGGCGGATCGGCTGATGG
TGTCAAGCTTACAGCTGTCGGAAGGTACCGTCGTGATTTTGGACGAAACA
AGACTAGAGTCTGGACCGGTTGGCGCCGAAGGCATCCACAATATCTCGGC
GCTTAAGTCGCTGACTTCCAGGCAGAAAATACCATACGATTTTGGGTTCT
ACAAGACGGATTTCGACGTGGATCATCCGACCATTGCGGTGTCGTCGCGT
GGATCTGTAGTCCCGATGGGTGCGGTAGTATCCGTTGACGTCAGCGGCGA
AATCCCTATCGTTTCGCATTCCGCGACGCTGGCGAGATTGCGCGTTTACG
TGGAAGCAACTCGACGGATGGACTTGGCTCTGGACGAGGTGTCTTCGTCT
TTCGCGGAGGAAGATTTTGTCAAGGCCAGACAGCAGGGCCACGCCCTGAC
GGTTGGCGCCGAAGGCATCCACAATATCTCGGCGCTTAAGTCGCTGACTT
CCAGGCAGAAAATACCATACGATTTTGGGTTCTACAAGACGGATTTCGAC
GTGGATCATCCGACCATTGCGGTGTCGTCGCGTGGATCTGTAGTCCCGAT
GGGTGCGGTAGTATCCGTTGACGTCAGCGGCGAAATCCCTATCGTTTCGC
ATTCCGCGACGCTGGCGAGATTGCGCGTTTACGTGGAAGCAACTCGACGG
ATGGACTTGGCTCTGGACGAGGTGTCTTCGTCTTTCGCGGAGGAAGATTT
TGTCAAGGCCAGACAGCAGGGCCACGCCCTGACGGGAGATGATTTTCACC
GGATGCTGACCATTGCAAGGCTAACCGCGCTGTCTCTGGGCGAAGGCATG
ATGAACGCGTCGCACTGGAACCACATGAAGGATCTAGAAGCGCGGGTGGC
GGGGCGTGCTCAGGGGTCGGGCGTGGAGAGAGCTCCTCAAGCTGCAGGCA
CAACTCCCCTAAACGCGATTCCGGAAGATGCGTGAGGAGATGATTTTCAC
CGGATGCTGACCATTGCAAGGCTAACCGCGCTGTCTCTGGGCGAAGGCAT
GATGAACGCGTCGCACTGGAACCACATGAAGGATCTAGAAGCGCGGGTGG
CGGGGCGTGCTCAGGGGTCGGGCGTGGAGAGAGCTCCTCAAGCTGCAGGC
ACAACTCCCCTAAACGCGATTCCGGAAGATGCGTGA
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