mRNA_H-elongata_contig19491.5424.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig19491.5424.1 vs. uniprot
Match: A0A6H5KW72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW72_9PHAE) HSP 1 Score: 665 bits (1717), Expect = 1.360e-224 Identity = 364/599 (60.77%), Postives = 423/599 (70.62%), Query Frame = 1
Query: 4 GKLPPNSLVRYRGMVQDQYEPEYFVGSFEEVNTATGQRSQVDVKYVDSIPQRAGFVNEFEGPNAKTVQRLPVFCIPVPGQSPWAQPTPRADRKQEGGLQQVGDGGAGEPTKRSREAEGA------------DGMDCTVKSSSGTNATILDDEPQGPVPSPLVKVKRTTAHEA----ALNESSLRNAETKSAVAGAFHHGQELDLAGLPCVVKLYDYQEGDLKLNDIAEFVGVLGYDQ---PLPSHEEAPMG-------SDNPFQGMDGFIRKVPPPSLAPRLHCIFYRAITACDPLVVDPKQPKDALHALQGPLPFGAFMLDTKRQAIAHLASALGGDALAAEYSLLTLLSRAYVRTESSAPGSLSLNLRGMSADHVPALHAAVAKLVPKCVTIPITTQSLSEMFKFAPKKDYEADRLMVSSLQLSEGTVVILDETRLESGPVGAEGIHNISALKSLTSRQKIPYDFGFYKTDFDVDHPTIAVSSRGSVVPMGAVVS--VDVSGEIPIVSHS-ATLARLRVYVEATRRMDLALDEVSSSFAEEDFVKARQQGHALTGDDFHRMLTIARLTALSLGEGMMNASHWNHMKDLEARVAGRAQ 1713
GKL NSLVRYRGMVQDQYEPEYFVGSFEE+ TATG+R++VDVKYVDSI QR GFVNE++GP AKT+ RLP+FC+P+PGQS WA P + ++ D MDCT A D+ P P L T+ A A SS A FHH QE++LAGL CVVK+YD++EG +KLND+ EFVGVLGYDQ P E+ PMG + NPFQG++ F RKVPPPSLAPRLHC+F+R + AC PL+VDPKQP+DAL ALQGPLPF FM + K++ I HLA AL GD LAAEY LL LLSRAYVRTES APGSLSLNLRG+ D P HAAV+ LVPKCVT+P+TT+SLSE FKF+PKKDYEADRLM+SSLQLS+GTVV+LDET LE G VG EG+ N++AL SL S QK+PYDFGFYK DF+VDHPTI++S+RGSVVP GAVV VD G S A LARLRVY+EATRR +L+LDE SS+ AEEDFVKARQQG A+TG+DFHRMLTIARLTALSLG+ M ASHW+HMKDLEARVA R Q
Sbjct: 75 GKLAANSLVRYRGMVQDQYEPEYFVGSFEELETATGKRNRVDVKYVDSIAQRPGFVNEYDGPGAKTMDRLPLFCVPIPGQSQWAIPPNQGEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAMDCTADEIGDAEAAS-GDKNGAPKPKTLRAAAGPTSEGARTPHADGHSSSVAASNDQRPNSTFHHEQEIELAGLACVVKMYDFREGQIKLNDMTEFVGVLGYDQAVTPPQEDEDVPMGEGGAGGATGNPFQGLEDFSRKVPPPSLAPRLHCVFHRQLPACTPLMVDPKQPQDALRALQGPLPFSVFMRNAKQETIKHLAKALRGDVLAAEYVLLALLSRAYVRTESLAPGSLSLNLRGVRPDDAPGFHAAVSNLVPKCVTVPVTTKSLSEKFKFSPKKDYEADRLMMSSLQLSDGTVVVLDETSLEPGQVGTEGVTNLAALNSLMSLQKVPYDFGFYKMDFEVDHPTISLSARGSVVPAGAVVPIVVDACGGTSYGSEDEALLARLRVYLEATRRTELSLDEKSSALAEEDFVKARQQGQAITGEDFHRMLTIARLTALSLGDEAMTASHWSHMKDLEARVAARVQ 672
BLAST of mRNA_H-elongata_contig19491.5424.1 vs. uniprot
Match: D8LEY8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEY8_ECTSI) HSP 1 Score: 344 bits (883), Expect = 1.110e-105 Identity = 192/349 (55.01%), Postives = 226/349 (64.76%), Query Frame = 1
Query: 1 QGKLPPNSLVRYRGMVQDQYEPEYFVGSFEEVNTATGQRSQVDVKYVDSIPQRAGFVNEFEGPNAKTVQRLPVFCIPVPGQSPWAQPTPRADRKQEGGLQQVGDGGAGEPTKRSREAEGA--DGMDCTVKSSSGTNATILDDEPQGPVPSPLVKVKRTTAHEA----ALNESSLRNAETKSAVAGAFHHGQELDLAGLPCVVKLYDYQEGDLKLNDIAEFVGVLGYDQ---PLPSHEEAPMG-------SDNPFQGMDGFIRKVPPPSLAPRLHCIFYRAITACDPLVVDPKQPKDALHALQGPLPFGAFMLDTKRQAIAHLASALGGDALAAEYSLLTLLSRAYVRTE 999
QGKL NSLVRYRGMVQDQYEPEYFVGSFEE+ TATG+R++VDVKYVDSI QR GFVNE++GP AKT+ RLP+FC+P+PGQS WA P + D MDCT AT D+ P P L ++ A A SS A + FHH QE+DL GL CV+K+YD++EG +KLND AEFVGVLGYDQ P E+ PMG + NPFQG++ F RKVPPPSLAPRLHC+F+R + AC PL+VDPKQP+DAL ALQGPLPFG FM + K++ I HLA AL GD LAAEY+LL LLSRAYVRTE
Sbjct: 2 QGKLAANSLVRYRGMVQDQYEPEYFVGSFEELETATGKRNRVDVKYVDSIAQRPGFVNEYDGPGAKTMDRLPLFCVPIPGQSQWAIPPNQGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAMDCTADEIGDAEATS-GDKNSAPKPKTLRAAAGPSSEGARTPNADGHSSSVTASNEQRPNSTFHHEQEIDLDGLACVIKMYDFREGQVKLNDTAEFVGVLGYDQAVTPPQEDEDVPMGEGGAGGATGNPFQGLEDFSRKVPPPSLAPRLHCVFHRQLRACTPLMVDPKQPQDALRALQGPLPFGVFMRNAKQETIKHLARALRGDVLAAEYALLALLSRAYVRTE 349
BLAST of mRNA_H-elongata_contig19491.5424.1 vs. uniprot
Match: A0A1Y1IQF2_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IQF2_KLENI) HSP 1 Score: 261 bits (667), Expect = 4.740e-72 Identity = 194/586 (33.11%), Postives = 292/586 (49.83%), Query Frame = 1
Query: 10 LPPNSLVRYRGMVQDQYEPEYFVGSFEEVNTATGQRSQVDVKYVDSIPQRAGFVNEFEGPNAKTVQRLPVFCIPVPGQSPWAQPTPRADRKQEGGLQQVGDGGAGEPTKRSREAEGADGMDCTVKSSSGTNATILDDEPQGPVPSPLVKVKRTTAHEAALNESSLRNAETKSAVAGAFHHGQELDLAGL--PCVVKLYDYQEGDLKLNDIAEFVGVLGYDQPLPSHEEAPMGSDNPFQGM-------DGFIRKVPP-----PSLAPRLHCIFYRAITACDPLVVDPKQPKDALHALQGPLPFGAFMLDTKRQAIAHLASALGGDALAAEYSLLTLLSRAYVRTESSAPGSLSLNLRGMSADHVPA-------LHAAVAKLVPKCVTIPITTQSLSEMFKFAPKKDYEADRLMVSSLQLSEGTVVILDETRLESGPVGAEGIHNISALKSLTSRQKIPYDFGFYKTDFDVDHPTIAVSSRGSVVPMGAVVSVDVS-----GEIPIVSHSATLARLRVYVEATRRMDLALDEVSSSFAEEDFVKARQQGHALTGDDFHRMLTIARLTALSLGEGMMNASHWNHMKDLE 1689
LP +LVR++GMVQD ++PEY+VG+F+E ++T + KY D V GP+A+ +R ++C+P+PGQS W++ T G ++ KR R+ E + ++ +I + + KR + S + N ET G G L L L PC+VK+YD + LKLND+AEFVG+L +D L + +G P GM D ++PP PS PRL CI+ + P + P A A + L A L + A++ L ALGGD LAA+Y LLTLLS+ R E A G L+LNL G A P L +A+ LVP C +P++ L+ P+KDY +RL+ + LQL+ GTV+++DET L+ G A G+ N+ AL+ L QK+ YDF +Y D D P +A+S S++P + + + +P A L LR Y+ R+++ + E ++ E+D V AR+ +LT DFHR LT+ARLT++S GE ++ S W ++++E
Sbjct: 68 LPSGTLVRFQGMVQDMFDPEYYVGAFKETPSSTWHTT----KYTDVYD-----VPIASGPDAQVWERKLLYCVPIPGQSDWSRGTRPTSLNGPGAHRE----------KRPRDDEEMSIAEPMLEEGEAGQESIGE------------QAKRQRE----ASSSGMSNNETGGC--GLLGEGMNLPLPSLLLPCLVKVYDDADAGLKLNDVAEFVGILTFDPQLAA--AGSVGRGEPASGMPGEGAAGDSLDEELPPSLRLSPSKVPRLQCIYLHKLPTLVPGLPPPASLAHAAAAQE--LAQSASAL--RACAVSLLTVALGGDTLAAQYLLLTLLSKVTGRAEPMAVGKLALNLVGCPAASPPGASPLASVLRSALPALVPACHLLPLSLDLLNRA-PLVPRKDYTLNRLVAAPLQLAAGTVLVVDETALQPGTASATGVRNLQALQHLVEWQKLEYDFQWYTVDVLTDVPVLALSEARSLLPADVTLPLRQTRTATWAPLP----DAELVALRRYLGLARQLEHTIGEATTKAIEDDLVAARKGDPSLTSQDFHRWLTLARLTSVSYGESSLSMSRWESVREME 605
BLAST of mRNA_H-elongata_contig19491.5424.1 vs. uniprot
Match: D8LEY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEY9_ECTSI) HSP 1 Score: 243 bits (619), Expect = 4.860e-70 Identity = 126/181 (69.61%), Postives = 147/181 (81.22%), Query Frame = 1
Query: 1180 MVSSLQLSEGTVVILDETRLESGPVGAEGIHNISALKSLTSRQKIPYDFGFYKTDFDVDHPTIAVSSRGSVVPMGAVVSVDVS---GEIPIVSHSATLARLRVYVEATRRMDLALDEVSSSFAEEDFVKARQQGHALTGDDFHRMLTIARLTALSLGEGMMNASHWNHMKDLEARVAGRAQ 1713
M+SSLQLS+GTVV+LDET LE G VG EG+ N++AL SL S QK+PYDFGFYK DF+VDHPTI++S+RGSVVP GAVV V V G A LARLR+Y+EATRR +L+LD+ SS+ AEEDFVKARQQG A+TG+DFHRMLTIARLTALSLG+ M ASHW+HMKDLEARVA R Q
Sbjct: 1 MMSSLQLSDGTVVVLDETSLEPGQVGTEGVTNLAALNSLMSLQKVPYDFGFYKMDFEVDHPTISLSARGSVVPAGAVVPVVVDACGGTSSGSEDQALLARLRIYLEATRRTELSLDDKSSALAEEDFVKARQQGQAVTGEDFHRMLTIARLTALSLGDEAMTASHWSHMKDLEARVAARVQ 181
BLAST of mRNA_H-elongata_contig19491.5424.1 vs. uniprot
Match: A0A6P8IAV9_ACTTE (Mini-chromosome maintenance complex-binding protein n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IAV9_ACTTE) HSP 1 Score: 252 bits (644), Expect = 6.480e-69 Identity = 191/582 (32.82%), Postives = 281/582 (48.28%), Query Frame = 1
Query: 7 KLPPNSLVRYRGMVQDQYEPEYFVGSFEEVNTATGQRSQVDVKYVDSIPQRAGFVNEFEGPNAKTVQRLPVFCIPVPGQSPWAQPTPRADRKQEGGLQQVGDGGA-----GEPTKRSREAEGADGMDCTVKSSSGTNATILDDEPQGPVPSPLVKVKRTTAHEAALNESSLRNAETKSAVAGAFHH---GQELDLAGLPCVVKLYDYQEGDLKLNDIAEFVGVLGYDQPLPSHEEAPMGSDNP-------FQGMDGFIRKVPPPSLAPRLHCIFYRAITACDPLVVDPKQPKDALHALQGPLPFGAFMLDTKRQAIAHLASALGGDALAAEYSLLTLLSRAYVRTESSAPGSLSLNLRG--MSADHVPALHAAVAKLVPKCVTIPITTQSLSEMFKFAPKKDYEADRLMVSSLQLSEGTVVILDETRLESGPVGAEGIHNISALKSLTSRQKIPYDFGFYKTDFDVDHPTIAVSSRGSVVPMGAVVSVDVSG---EIPIVSHSATLARLRVYVEATRRMDLALDEVSSSFAEEDFVKARQQGHA-LTGDDFHRMLTIARLTALSLGEGMMNASHWNHMKDLE 1689
KL PNSLV++R MVQD + PEYF+ +E V+ G+ Y D G FE T ++ FC+P+PG++ WA+ EG ++ + G G+ KRS E + D + G ++ QG + KV A+E A SS SA+ + +H G+ G C+V +YD E D+KLND+ EF+G++ + E +P F + PP SL PRLHC+FY+ + +P + P DA L + + + L S L GD LAAEY LL L+S Y R A G SLNL G M + + +++PKCV + +T +++ + F PKKDY+A+RL+ LQLS+ T +ILDET LE+G + G+ N++AL SL S QK+ YDF FYKTDF + + +S S++P + ++ S E P+ L R Y+ R ++ +EDFV+ARQ+ + +T DDFHR L +ARL A+S G + W +K LE
Sbjct: 55 KLRPNSLVKFRCMVQDMFGPEYFLSEYEIVSKTRGETKMRSGMYRDMADCPQGHEANFESARNVTAEKHSYFCVPIPGETEWAK---------EGFARKSANHGTKAPQTGQSNKRSLEED----EDMEQEQGDGVLEEGIETS-QGDAQNKKSKV----ANEIAQESSS-------SAMVTSLNHPIPGEN----GPSCIVHVYDKCE-DIKLNDMVEFIGIVSIQPHFATFTEEKSEESSPMVLTADSFMSEEEHAAHYPPTSLVPRLHCVFYQHLKHSNPSI-----PLDADEKTSDSLL--PQVARARGDLLFMLKSLLLGDELAAEYLLLHLVSSVYTRCGIMAVGKFSLNLCGCPMEPSFTKRISDTLKQVLPKCVNMQMTLNNMNTL-NFVPKKDYKANRLISGILQLSDSTQLILDETALEAGQLNTNGVQNVTALGSLISWQKLEYDFDFYKTDFKSNIQVLVLSEGKSMLPCDCHIKIETSSSQQESPVNMSEDLLNMFRTYIGLVRLSSYSITPAMQKALQEDFVQARQRNPSTMTADDFHRHLLVARLMAVSSGSSTLTQELWEKVKKLE 598
BLAST of mRNA_H-elongata_contig19491.5424.1 vs. uniprot
Match: A7RN02_NEMVE (Mini-chromosome maintenance complex-binding protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7RN02_NEMVE) HSP 1 Score: 250 bits (639), Expect = 4.340e-68 Identity = 197/598 (32.94%), Postives = 294/598 (49.16%), Query Frame = 1
Query: 10 LPPNSLVRYRGMVQDQYEPEYFVGSFEEVNTATGQRSQVDVKYVDSIPQRAGFVNEFEGPNAKTVQRLPVFCIPVPGQSPWAQPT--PRADRKQEGGLQQVGDGGAGEPTKRSREAEGADGMDCTVK-------SSSGTNATILDDEPQGPVPSPLVKVKRTTAHEAALNESSLRNAETKSAVAGAFHHGQELDLAGLPCVVKLYDYQEGDLKLNDIAEFVGVLGYDQPLPSHE-EAPMGSDNPFQGMDGFI----RKV--PPPSLAPRLHCIFYRAITACDPLVVDPKQPKDALHALQGPLPFGAFMLDTKRQAIAHLASALGGDALAAEYSLLTLLSRAYVRTESSAPGSLSLNLRGMSADHVPALHAAVAKLV--------PKCVTIPITTQSLSEMFKFAPKKDYEADRLMVSSLQLSEGTVVILDETRLESGPVGAEGIHNISALKSLTSRQKIPYDFGFYKTDFDVDHPTIAVSSRGSVVPMGAVVSVDVSGE-------IPIVSHSATLARLRVYVEATRRMDLALDEVSSSFAEEDFVKARQQGHA-LTGDDFHRMLTIARLTALSLGEGMMNASHWNHMKDLEARVAGR 1707
L PNSLVR+R MVQD + PEYF+ +E + +TG+ Y D + +F P T ++ +C+P+PG++ WA+ R+ Q GG Q+ KRS E + +G T + S SGT+ S + K+T E ++S N T + + F E G C+V LY+ Q ++KLND EF+G+L L S EAP SD F D + R V PPPSL PRLHC+ R + +P + +D+L +L P+ L + +A L L GD LAAEY LL LLS Y R+ A G ++NL G+ L ++ V PKC +P+T +L+ + F PKKDY DRLM LQLS GT ++LDET +E+G + A G+ N+++L +L S QK+ YDF FYKT+F VD + +S S++P V +D + ++HS + ++R Y+ R + ++ +EDFV RQQ ++ DDFH L +ARL ++S G+ + W +K++E++ R
Sbjct: 57 LKPNSLVRFRCMVQDMFGPEYFLSQYEVKSKSTGETVLASGLYRDVVDCSGDLEVDFNSPKCVTSEKQTYYCVPIPGETEWAKQAFAERSPLVQHGGPSQLS-----MSNKRSLEDDEMEGDHTTAQQHEDLRTSPSGTSGDC----------SQIQDPKKTRTEE---TKASTNNIATTAMPSLNFPLPGE---QGPACLVHLYE-QCDNIKLNDTLEFIGILSVHPSLASTPGEAP--SDPSFITADDVMCQEERAVHHPPPSLVPRLHCLVARPMKHSNP-TMPTVLAEDSLKSLTPPV------LHVRDDLLAALEKLLCGDRLAAEYLLLHLLSTVYTRSGVMAVGKFAINLSGLPTQQTLPLEERISSQVAKFLKHVLPKCHLLPMTLNNLNSL-NFIPKKDYTKDRLMSGMLQLSNGTELVLDETAMEAGQLNATGVQNVTSLGNLMSWQKLAYDFNFYKTEFMVDIKVLVMSEGKSLLPSDCQVKLDPQRSADSADTVLNNINHSV-IEKMRCYLGLLRFAEYSVSPEMQKVLQEDFVSVRQQTDGKMSADDFHLHLLLARLLSISYGQVPLTNEVWAKVKNMESKRRAR 621
BLAST of mRNA_H-elongata_contig19491.5424.1 vs. uniprot
Match: A0A2N9EVE8_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EVE8_FAGSY) HSP 1 Score: 249 bits (636), Expect = 6.200e-68 Identity = 180/570 (31.58%), Postives = 279/570 (48.95%), Query Frame = 1
Query: 10 LPPNSLVRYRGMVQDQYEPEYFVGSFEEVNTATGQRSQVDVKYVDSIPQRAGFVNEFEGPNAKTVQRLPVFCIPVPGQSPWAQPTPRADRKQEGGLQQVGDGGAGEPTKRSR-EAEGADGMDCTVKSSSGTNATILDDEPQGPVPSPLVKVKRTTAHEAALNESSLRNAETKSAVAGAFHHGQELDLAGLPCVVKLYDYQEGDLKLNDIAEFVGVLGYDQPLPSHEEAPMGSDNPFQGMDGFIRKVP---PPSLAPRLHCIFYRAITACDPLVVDPKQPKDALHALQGPLPFGAFMLDTKRQAIAHLASALGGDALAAEYSLLTLLSRAYVRTESSAPGSLSLNLRGMSADHVPA----LHAAVAKLVPKCVTIPITTQSLSEMFKFAPKKDYEADRLMVSSLQLSEGTVVILDETRLESGPVGAEGIHNISALKSLTSRQKIPYDFGFYKTDFDVDHPTIAVSS-RGSVVPMGAVVSVDVSG-EIPIVSHSATLARLRVYVEATRRMDLALDEVSSSFAEEDFVKARQQGHALTGDDFHRMLTIARLTALSLGEGMMNASHWNHMKDLE 1689
+ PN+LVR+RGM+QD E++VG +++ + +DV + + ++ + +R ++C+PVPGQ+ W +P+ E + + D + KR R + E D MD V DD QG SP K + H + SS + D LPC+VK+YD E DLKLND+ EF+GVL +D E P+ D+ + +GF PP+ PRLHC+ +R +T D LH+ P + + + HL + LG D+ AA + LL LLSR + R ++ A G LSLNL G S + V L AV L+P IP+T + L+ APKKDYE +RL+ LQL+EG+ +I+DET+LESG + + G+ N + LK+L QK+ YDF +YK + D + +S + +++P V+ S + V + L R Y+ + + +++ E+D V+ARQ + DF+R LT+ RL ++S GE ++ HW +K+LE
Sbjct: 69 VQPNTLVRFRGMIQDMLGNEFYVGVYKD-GSVWRTNKFMDVSHFPMPSSSSSSSSDMQ-----VWERRLLYCVPVPGQNSWTEPS------SESAMNRCVDCTSQPREKRRRMDDEPVDNMDMVVS----------DDGCQG---SPCTKKMKEDGHP---SMSSQTQEAINEGICSHMSVVPNTDRDSLPCLVKIYDSPESDLKLNDVFEFIGVLTFDS------EVPVDKDDHDELSNGFSEDALAHLPPNKVPRLHCLIHRKLTV-----------PDFLHSSPTMEPKPHLFKEIRAALLRHLTAVLGNDSFAAHFMLLHLLSRVHTRVDTLAVGKLSLNLTGFSKESVSLFGHRLSHAVKDLLPFTHCIPLTVEYLNSA-SLAPKKDYETNRLITGVLQLAEGSHLIIDETQLESGTLNSVGVENATLLKNLMELQKVEYDFKYYKMEMAADVQMLIISEGKSNILPADIVIPFQPSSVDSSEVVAAEALEAWRWYLATVKSLPHSIESEMQKVVEDDLVEARQTDRTIGSRDFNRWLTMGRLMSVSFGETSLSLEHWQMVKELE 592
BLAST of mRNA_H-elongata_contig19491.5424.1 vs. uniprot
Match: A0A1R3H007_COCAP (Mini-chromosome maintenance complex-binding protein n=2 Tax=Corchorus TaxID=93758 RepID=A0A1R3H007_COCAP) HSP 1 Score: 247 bits (630), Expect = 2.880e-67 Identity = 182/570 (31.93%), Postives = 278/570 (48.77%), Query Frame = 1
Query: 10 LPPNSLVRYRGMVQDQYEPEYFVGSFEEVNTATGQRSQVDVKYVDSIPQRAGFVNEFEGPNAKTVQRLPVFCIPVPGQSPWAQPTPRADRKQEGGLQQVGDGGAGEPTKRSREAEGADGMDCTVKSSSGTNATILDDEPQGPVPSPLVKVKRTTAHEAALNESSLRNAETKSAVAGAFHHGQELDLAGLPCVVKLYDYQEGDLKLNDIAEFVGVLGYDQPLPSHEEAPMGSDNPFQGMDGFIRKVPPPSLAPRLHCIFYRAITACDPLVVDP-KQPKDALHALQGPLPFGAFMLDTKRQAIAHLASALGGDALAAEYSLLTLLSRAYVRTESSAPGSLSLNLRGMSADHVPALHAAVAK----LVPKCVTIPITTQSLSEMFKFAPKKDYEADRLMVSSLQLSEGTVVILDETRLESGPVGAEGIHNISALKSLTSRQKIPYDFGFYKTDFDVDHPTIAVSS-RGSVVPMGAVVSVDVSG----EIPIVSHSATLARLRVYVEATRRMDLALDEVSSSFAEEDFVKARQQGHALTGDDFHRMLTIARLTALSLGEGMMNASHWNHMKDLE 1689
+ PN+LVRYRGM+QD E++VG+F++ N K+ D G P+ +R ++C+PVPGQS W +P+ D Q +R + E AD MD + DD+ + SP K R + L E+ + + +F Q++D LPC+VK+YD E +LKLND+ EF+GVL +D LP ++ D+ G+ PP+ PRLHC +R + D L P +PK L + + + HL + LG D +AA + LL LLS+ + R + A G LSLNL G+S + + +++ L+P +IP+T + L+ APKKDY+A+RL+ LQL EG+ + +DET+L+SG + + G+ N + LK+L+ QK+ YDF +YK + D + S + ++VP VV S E P+ + L R Y+ R + ++ E+D V ARQ L DF R LT+ARL + S GE ++ HW +K+LE
Sbjct: 68 VQPNTLVRYRGMIQDMLGNEFYVGAFKDGNLWRTN------KFTDVSQYPMG-----SSPDMCVWERRLLYCVPVPGQSSWTEPS--CDMGPNWSSQT-------REKRRRMDDEDADPMDL-----------VPDDDIKS---SPTTKKMREDGFPSPLPEAMESKPGSSGSSMSSF---QQVDKDNLPCLVKIYDTPELELKLNDVFEFIGVLTFDSELPVEKDDNEDLDDAMVGL--------PPNKVPRLHCFIHRKLAVHDFLQGSPIMEPKPHL------------VKEIREALFRHLTAVLGNDGVAAHFMLLHLLSKVHARVDDVAVGKLSLNLTGLSKESMSVFGTRISQAFKDLLPFTHSIPLTLEYLNAA-SLAPKKDYQANRLIPGVLQLPEGSHLTVDETQLQSGTLNSNGVENTNVLKTLSEFQKVEYDFQYYKMEMAADVQLLIFSEGKSNIVPADVVVPFQPSSLESSETPV---AEPLEAWRWYLATVRSLPHSIGSEMQKVVEDDLVAARQANRNLGSQDFSRWLTMARLVSTSFGETNLSLEHWQLVKELE 576
BLAST of mRNA_H-elongata_contig19491.5424.1 vs. uniprot
Match: I6UEI0_BETVU (E2F target protein 1 n=1 Tax=Beta vulgaris TaxID=161934 RepID=I6UEI0_BETVU) HSP 1 Score: 247 bits (630), Expect = 3.360e-67 Identity = 184/574 (32.06%), Postives = 292/574 (50.87%), Query Frame = 1
Query: 10 LPPNSLVRYRGMVQDQYEPEYFVGSFEEVNT-ATGQRSQVDVKYVDSIPQRAGFVNEFEGPNAKTVQRLPVFCIPVPGQSPWAQPTPRADRKQEGGLQQVGDGGAGEPTKRSR-EAEGADGMDCTVKSSSGTNATILDDEPQGPVPSPLVKVKRTTAH--EAALNESSLRNAETKSAVAGAFHHGQELDLAGLPCVVKLYDYQEGDLKLNDIAEFVGVLGYDQPLP-SHEEAPMGSDNPFQGMDGFIRKVPPPSLAPRLHCIFYRAITACDPLVVDPKQPKDALHALQGPLPFGAFMLDTKRQAIAHLASALGGDALAAEYSLLTLLSRAYVRTESSAPGSLSLNLRGMSAD----HVPALHAAVAKLVPKCVTIPITTQSLSEMFKFAPKKDYEADRLMVSSLQLSEGTVVILDETRLESGPVGAEGIHNISALKSLTSRQKIPYDFGFYKTDFDVDHPTIAVSS-RGSVVPMGAVV----SVDVSGEIPIVSHSATLARLRVYVEATRRMDLALDEVSSSFAEEDFVKARQQGHALTGDDFHRMLTIARLTALSLGEGMMNASHWNHMKDLE 1689
+ PN+LVR+RGM+QD E++ G +++ +T T + S V +D P + + +R ++C+PVPG + WA+P +Q+ Q + KR R + E AD MD QG + SP+ K R H +A+ + L T S + + PC+VK+YD E +L+LN+I EF+GVL +D L + EEA + S++ ++ D I PPS PR+HC+ ++ + D + V P + L + +T+ + +L + LG D +AA+Y LL LLSR + R + A G LSLN +S + V L A+ +L+P IP+T + L+ APKKDYEA++L+ LQL+EG+ + +DET+L+SG + + G+ N +LK+LT Q++ YDF +YK + D + +S + +++P V+ S VS EI + A L R Y+ R + ++ EED V ARQ +L DF R+LT++RL +LS GE ++ HW +K+LE
Sbjct: 68 IQPNTLVRFRGMIQDMLGNEFYAGVYKDGSTWRTNKYSDVSQVQMDFSP------------DMRLWERRLLYCVPVPGLNSWAEPLEVLSNQQKILASQ-------QREKRPRNDDEAADHMDLESN--------------QGCLDSPVTKKMREEGHPSSSAMQQDMLNEGTTPS------FRLPDSEKNPFPCLVKVYDSPESELRLNEIFEFIGVLSFDSELELNKEEADLQSNSLYE--DDLIHL--PPSKVPRIHCLVHKKLAVNDFVNVSPMTELNPL-----------LIRETREVLLRYLTAVLGNDGVAAQYLLLHLLSRVHARVDGVAVGKLSLNFTSISQETASVFVSRLSLAMKELLPFTQHIPLTIEYLNNA-TLAPKKDYEANKLVSGVLQLAEGSHLTVDETKLQSGTLNSTGVENTRSLKNLTEVQQVEYDFKYYKMEMAADVQLLVLSEGKSNILPTDLVLPFQPSSTVSSEI---TDEAMLQSWRWYLATMRSLPHSISPEMQKVVEEDLVAARQADRSLGSHDFSRLLTMSRLMSLSFGETSLSMEHWQMVKELE 583
BLAST of mRNA_H-elongata_contig19491.5424.1 vs. uniprot
Match: A0A200RAE0_9MAGN (Mini-chromosome maintenance complex-binding protein n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200RAE0_9MAGN) HSP 1 Score: 244 bits (622), Expect = 2.170e-66 Identity = 185/578 (32.01%), Postives = 287/578 (49.65%), Query Frame = 1
Query: 4 GKLPPNSLVRYRGMVQDQYEPEYFVGSFEEVNTATGQRSQVDVKYVD--SIPQRAGFVNEFEGPNAKTVQRLPVFCIPVPGQSPWAQPTPRADRKQEGGLQQVGDGGAGEPTKRSREAE-GADGMDCTVKSSSGTNATILDDEPQGPVPSPLVKVKRTTAHEAALNESSLRNAETKSAVAGAFHHGQELDLAGLPCVVKLYDYQEGDLKLNDIAEFVGVLGYDQPLPSHEEAPMGSDNPFQGMDGFIRKVPPPSLAPRLHCIFYRAITACDPLVVDPKQPKDALHALQGPLPFGAFMLDTKRQAIAHLASALGGDALAAEYSLLTLLSRAYVRTESSAPGSLSLNLRGMSADHVPA----LHAAVAKLVPKCVTIPITTQSLSEMFKFAPKKDYEADRLMVSSLQLSEGTVVILDETRLESGPVGAEGIHNISALKSLTSRQKIPYDFGFYKTDFDVDHPTIAVSS-RGSVVPMGAVVSVDVSGEIPIVSHSA-TLARLRVYVEATRRMDLALDEVSSSFAEEDFVKARQQGHALTGDDFH-------RMLTIARLTALSLGEGMMNASHWNHMKDLE 1689
G++ PNSLVR+RGMVQD + E +VG+F++ +T K+ D S P + + +R ++C+PVPGQSPW + + E + + G+ KR RE + D MD V IL + +P + + + + +S + + +TKS LPC+VK+YD E +LKLND+ EFVGV +D L HE+ GSD G+ PP+ PRLHC +R + D LV P + P+P + + + +L + LG D +AA+ LL LLS+ + R ++ A G LSLNL G S + V L+ A+ L+P ++P+T ++L+ APKKDY+ +RL+ +LQL+EGT + LDET+L +G + + GI N+ LK+L QK+ YDF +YK + D + +S + +++P V+ S V+ +L R Y+ R + +D E+D V ARQ+ +L +DF R LT+ARL + S GE ++ HW +K+LE
Sbjct: 28 GRIQPNSLVRFRGMVQDMFGNELYVGAFKDGSTWRTN------KFTDVASFPMSSST-------ETRIWERRLLYCVPVPGQSPWVVQSSDSASSSETVINRCGNWTPQHGEKRRREDDMSVDQMDLNV-------CPILLFIREDGLPCQASQSQESVIGGTSPIQSMVPDFDTKS----------------LPCLVKIYDSPESELKLNDVFEFVGVFTFDPELMVHED---GSDEFSSGLCEDTLVHLPPNKVPRLHCFIHRKLAVHDFLVGSP---------VNEPMP--NLVRGIRESLLRYLTAVLGNDGVAAQCVLLHLLSQVHARVDAIAVGKLSLNLTGFSRESVSVFGNQLNIAIQSLLPFTQSMPLTVENLNTA-SLAPKKDYQTNRLLAGTLQLAEGTHLTLDETQLNAGILNSTGIENVRLLKNLMDLQKVEYDFEYYKLEMSSDVQLLILSEGKSNILPADLVLPFQPSVVASSVNADGDSLQAWRWYLATLRSLPHVIDTELQKVIEDDLVAARQEDRSLGSNDFSSGYLELFRWLTMARLMSASFGETSLSLEHWQMVKELE 554 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19491.5424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig19491.5424.1 >prot_H-elongata_contig19491.5424.1 ID=prot_H-elongata_contig19491.5424.1|Name=mRNA_H-elongata_contig19491.5424.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=581bp MVQDQYEPEYFVGSFEEVNTATGQRSQVDVKYVDSIPQRAGFVNEFEGPNback to top mRNA from alignment at H-elongata_contig19491:1583..7060+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig19491.5424.1 ID=mRNA_H-elongata_contig19491.5424.1|Name=mRNA_H-elongata_contig19491.5424.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5478bp|location=Sequence derived from alignment at H-elongata_contig19491:1583..7060+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig19491:1583..7060+ >mRNA_H-elongata_contig19491.5424.1 ID=mRNA_H-elongata_contig19491.5424.1|Name=mRNA_H-elongata_contig19491.5424.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3486bp|location=Sequence derived from alignment at H-elongata_contig19491:1583..7060+ (Himanthalia elongata Himel1 dioecious)back to top |