mRNA_H-elongata_contig190165.5243.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig190165.5243.1
Unique NamemRNA_H-elongata_contig190165.5243.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig190165.5243.1 vs. uniprot
Match: A0A6H5KDS6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDS6_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 2.630e-36
Identity = 89/203 (43.84%), Postives = 115/203 (56.65%), Query Frame = 1
Query:    1 ATQDVRTMAVDGKHGVGRALDDLNVYDRLGYDAIGLQETRRSGHPAFNQAGYSVYCSG-ECGXXXXXXKGQGGVGLAIRTSITRAAR-PPEFISDRLLKVTLELRGRVKAVTFFVAYAPTETQNASNKHTFWTSLD----RAMEHEQLFVLMDVNARTGRREKGQVGSKDLKILGAYGRDTLNDNGELLPSFANNHDLALVNT 591
            AT +VRT+AV+G +G GRA   L+   R     +G+QETRR+G   F  AG+ V+C G E G       G  GVG+A++ S+ + +    EFI + L+ +   L G   AV F  AYAPTE   A +K  FW  LD    R    E + VLMD NARTG R  G  G    +++G YGRD LNDNG LL +FA  + LAL NT
Sbjct:  116 ATWNVRTLAVNGANGYGRAYSVLHEAARQDVSVVGMQETRRAGRTEFAAAGFRVFCCGTETG-------GVHGVGIAVKESLCKTSTFTTEFIDESLMAMRFLLAGHRGAVNFVAAYAPTEPSTADSKRVFWGKLDSLVRRIPSKECVHVLMDANARTGDRLDGGDG----RVIGMYGRDELNDNGMLLLNFATGNRLALTNT 307          
BLAST of mRNA_H-elongata_contig190165.5243.1 vs. uniprot
Match: A0A6H5JBD7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBD7_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 6.550e-35
Identity = 90/203 (44.33%), Postives = 117/203 (57.64%), Query Frame = 1
Query:    1 ATQDVRTMAVDGKHGVGRALDDLNVYDRLGYDAIGLQETRRSGHPAFNQAGYSVYCSG-ECGXXXXXXKGQGGVGLAIRTSITRAAR-PPEFISDRLLKVTLELRGRVKAVTFFVAYAPTETQNASNKHTFWTSLD----RAMEHEQLFVLMDVNARTGRREKGQVGSKDLKILGAYGRDTLNDNGELLPSFANNHDLALVNT 591
            AT +VRT+AV G +G GRA   L+   R     +G+QETRR+G   F  AG+ V+C G E G       G  GVG+A++ S+ + +    EFI +RL+ + L L G   AV F  A APTE   AS+K  FW  LD    R    E ++VL+D NARTG R  G  G    +++G YGRD LNDNG LL +FA  + LAL NT
Sbjct:   61 ATWNVRTLAVIGVNGYGRAYSVLHEAARQDVSVVGMQETRRAGRTEFAAAGFRVFCCGTETG-------GVHGVGIAVKESLCKTSTFTTEFIDERLMAMRLLLAGHRGAVNFVAASAPTEPSTASSKRVFWGKLDSLVRRIPSKECVYVLLDANARTGDRLDGGDG----RVIGMYGRDELNDNGMLLLNFATENRLALTNT 252          
BLAST of mRNA_H-elongata_contig190165.5243.1 vs. uniprot
Match: A0A6H5KQZ7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ7_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 2.230e-34
Identity = 81/202 (40.10%), Postives = 119/202 (58.91%), Query Frame = 1
Query:    1 ATQDVRTMAVDGKHGVGRALDDLNVYDRLGYDAIGLQETRRSGHPAFNQAGYSVYCSGECGXXXXXXKGQGGVGLAIRTSITRAAR-PPEFISDRLLKVTLELRGRVKAVTFFVAYAPTETQNASNKHTFWTSLD----RAMEHEQLFVLMDVNARTGRREKGQVGSKDLKILGAYGRDTLNDNGELLPSFANNHDLALVNT 591
            AT +VRT+AV+G +G GRA   L+   + G   +GLQE RR G   F  +G+ V+    CG       G  GVG+A+  ++ ++++   E++ +RL+ +  E+ G   AVTF  AYAPT+     +KH FW  LD    R    E LFVLMD NA+TG    G +  ++ + +G YGR+ LNDNG LL +FA ++ LA++NT
Sbjct:   77 ATYNVRTLAVNGANGYGRADSVLHEAAKQGISFVGLQEVRRPGRTEFAASGFRVFT---CGTDKG---GTHGVGIAVEETLCKSSQYTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVATTESKHMFWEKLDSLVRRTPAKEYLFVLMDANAQTG----GGIAGENERTMGEYGRNELNDNGRLLLTFATDNRLAVLNT 268          
BLAST of mRNA_H-elongata_contig190165.5243.1 vs. uniprot
Match: A0A6H5K7U5_9PHAE (Reverse transcriptase domain-containing protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7U5_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 8.370e-34
Identity = 81/202 (40.10%), Postives = 119/202 (58.91%), Query Frame = 1
Query:    1 ATQDVRTMAVDGKHGVGRALDDLNVYDRLGYDAIGLQETRRSGHPAFNQAGYSVYCSGECGXXXXXXKGQGGVGLAIRTSITRAAR-PPEFISDRLLKVTLELRGRVKAVTFFVAYAPTETQNASNKHTFWTSLD----RAMEHEQLFVLMDVNARTGRREKGQVGSKDLKILGAYGRDTLNDNGELLPSFANNHDLALVNT 591
            AT +VRT+AV+G +G GRA   L+   + G   +GLQE RR G   F  +G+ V+    CG       G  GVG+A+  ++ ++++   E++ +RL+ +  E+ G   AVTF  AYAPT+     +KH FW  LD    R    E LFVLMD NA+TG    G +  ++   +G YGR+ LN+NGELL +FA ++ LA++NT
Sbjct:   22 ATYNVRTLAVNGANGYGRADSVLHEAAKQGISFVGLQEVRRPGRTEFAASGFRVFT---CGTDKG---GTHGVGIAVEETLCKSSQYTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVATTESKHMFWEKLDSLVRRTPAKEYLFVLMDANAQTG----GGIAGENEGTMGEYGRNELNENGELLLTFATDNRLAVLNT 213          
BLAST of mRNA_H-elongata_contig190165.5243.1 vs. uniprot
Match: A0A6H5JLM6_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLM6_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 8.710e-34
Identity = 81/202 (40.10%), Postives = 119/202 (58.91%), Query Frame = 1
Query:    1 ATQDVRTMAVDGKHGVGRALDDLNVYDRLGYDAIGLQETRRSGHPAFNQAGYSVYCSGECGXXXXXXKGQGGVGLAIRTSITRAAR-PPEFISDRLLKVTLELRGRVKAVTFFVAYAPTETQNASNKHTFWTSLD----RAMEHEQLFVLMDVNARTGRREKGQVGSKDLKILGAYGRDTLNDNGELLPSFANNHDLALVNT 591
            AT +VRT+AV+G +G GRA   L+   + G   +GLQE RR G   F  +G+ V+    CG       G  GVG+A+  ++ ++++   E++ +RL+ +  E+ G   AVTF  AYAPT+     +KH FW  LD    R    E LFVLMD NA+TG    G +  ++   +G YGR+ LN+NGELL +FA ++ LA++NT
Sbjct:  513 ATYNVRTLAVNGANGYGRADSVLHEAAKQGISFVGLQEVRRPGRTEFAASGFRVFT---CGTDKG---GTHGVGIAVEETLCKSSQYTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVATTESKHMFWEKLDSLVRRTPAKEYLFVLMDANAQTG----GGIAGENEGTMGEYGRNELNENGELLLTFATDNRLAVLNT 704          
BLAST of mRNA_H-elongata_contig190165.5243.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 9.960e-34
Identity = 90/211 (42.65%), Postives = 120/211 (56.87%), Query Frame = 1
Query:    4 TQDVRTMAVDGKHGVGR-ALDDLNVYDRLGYDAIGLQETRRSGHPAFNQAGYSVYCSGECGXXXXXXKGQGGVGLAIRT----SITRAARPPEFISDRLLKVTLELRGRVKAVTFFVAYAPTETQNASN------KHTFWTSLDRAMEH----EQLFVLMDVNARTGRREKGQVGSKDLKILGAYGRDTLNDNGELLPSFANNHDLALVNT 591
            T +VRT+A  G++ +G   +  + +    G D IGLQETRR+G  +    GY +  SG         +G  GVG+AI+     S+    R  E IS RL+KV L++ GR   VTF V YAPTET   +       K +FWT+LD A+      + L VLMD NARTGRR KG     D KI+GAYGRD +N+NGE L   A+++ L+L NT
Sbjct:  179 TFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSG-ARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRKGCC---DAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNT 384          
BLAST of mRNA_H-elongata_contig190165.5243.1 vs. uniprot
Match: A0A6H5K319_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K319_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 1.170e-33
Identity = 81/202 (40.10%), Postives = 119/202 (58.91%), Query Frame = 1
Query:    1 ATQDVRTMAVDGKHGVGRALDDLNVYDRLGYDAIGLQETRRSGHPAFNQAGYSVYCSGECGXXXXXXKGQGGVGLAIRTSITRAAR-PPEFISDRLLKVTLELRGRVKAVTFFVAYAPTETQNASNKHTFWTSLD----RAMEHEQLFVLMDVNARTGRREKGQVGSKDLKILGAYGRDTLNDNGELLPSFANNHDLALVNT 591
            AT +VRT+AV+G +G GRA   L+   + G   +GLQE RR G   F  +G+ V+    CG       G  GVG+A+  ++ ++++   E++ +RL+ +  E+ G   AVTF  AYAPT+     +KH FW  LD    R    E LFVLMD NA+TG    G +  ++   +G YGR+ LN+NGELL +FA ++ LA++NT
Sbjct:  309 ATYNVRTLAVNGANGYGRADSVLHEAAKQGISFVGLQEVRRPGRTEFAASGFRVFT---CGTDKG---GTHGVGIAVEETLCKSSQYTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVATTESKHMFWEKLDSLVRRIPAKEYLFVLMDANAQTG----GGIAGENEGTMGEYGRNELNENGELLLTFATDNRLAVLNT 500          
BLAST of mRNA_H-elongata_contig190165.5243.1 vs. uniprot
Match: A0A6H5L660_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L660_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 3.730e-33
Identity = 87/211 (41.23%), Postives = 115/211 (54.50%), Query Frame = 1
Query:    4 TQDVRTMAVDGKHGVGR-ALDDLNVYDRLGYDAIGLQETRRSGHPAFNQAGYSVYCSGECGXXXXXXKGQGGVGLAIRT----SITRAARPPEFISDRLLKVTLELRGRVKAVTFFVAYAPTETQNASN------KHTFWTSLDRAME----HEQLFVLMDVNARTGRREKGQVGSKDLKILGAYGRDTLNDNGELLPSFANNHDLALVNT 591
            T +VRT+A  G++ +G   +  + +    G D IGLQETRR G  +    GY +  SG         +G  GVG+AI+     S+    R  E I  RL+KV L + GR   +TF V YAPTET   +       K +FWT+LD  +     H+ L VLMD NARTGRR  G     D KI+G YGRD +N+NGE L   A+N+ L+L NT
Sbjct:  152 TFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSG-ARAGTKDKRGVHGVGIAIKETMWESVGEEGRKVECIGPRLMKVRLRI-GRTCGITFVVRYAPTETVRTTAGGDINAKDSFWTALDAVIREVHSHDHLVVLMDANARTGRRRDGCC---DAKIMGVYGRDIMNNNGERLLGLASNNQLSLTNT 357          
BLAST of mRNA_H-elongata_contig190165.5243.1 vs. uniprot
Match: A0A6H5K9G5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9G5_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 1.230e-32
Identity = 80/202 (39.60%), Postives = 117/202 (57.92%), Query Frame = 1
Query:    1 ATQDVRTMAVDGKHGVGRALDDLNVYDRLGYDAIGLQETRRSGHPAFNQAGYSVYCSGECGXXXXXXKGQGGVGLAIRTSITRAAR-PPEFISDRLLKVTLELRGRVKAVTFFVAYAPTETQNASNKHTFWTSLD----RAMEHEQLFVLMDVNARTGRREKGQVGSKDLKILGAYGRDTLNDNGELLPSFANNHDLALVNT 591
            AT +VRT+AV+G +G GRA   L+   +     +GLQE RR G   F  +G+ V+    CG       G  GVG+A+  ++ +A++   E++ +RL+ +  E+ G   AV F  AYAPT+   A +K  FW  LD    R    E LFVLMD NA+TG    G +  ++ + +G YGR+ LNDNG LL +FA ++ LA++NT
Sbjct:   47 ATYNVRTLAVNGANGYGRADKVLHEAAKQDISFVGLQEVRRPGRTEFTASGFRVFT---CGTDKG---GTHGVGIAVEEALCKASQYTTEYVDERLMAMRFEMTGHRGAVNFVAAYAPTDVATADSKRMFWEKLDSLVRRIPAKEYLFVLMDANAQTG----GGIAGENERTMGEYGRNELNDNGRLLLTFATDNRLAVLNT 238          
BLAST of mRNA_H-elongata_contig190165.5243.1 vs. uniprot
Match: A0A6H5JMB4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMB4_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 1.640e-32
Identity = 89/211 (42.18%), Postives = 120/211 (56.87%), Query Frame = 1
Query:    4 TQDVRTMAVDGKHGVGR-ALDDLNVYDRLGYDAIGLQETRRSGHPAFNQAGYSVYCSGECGXXXXXXKGQGGVGLAIRT----SITRAARPPEFISDRLLKVTLELRGRVKAVTFFVAYAPTETQ------NASNKHTFWTSLDRAMEH----EQLFVLMDVNARTGRREKGQVGSKDLKILGAYGRDTLNDNGELLPSFANNHDLALVNT 591
            T +VRT+A  G++ +G   +  + +    G D IGLQETRR+G  +    GY +  SG         +G  GVG+AI+     S+    R  E IS RL+KV L++ GR   VTF V YAPTET       + + K +FWT+LD A+      + L VLMD NARTGRR  G     D KI+GAYGRD +N+NGE L   A+++ L+L NT
Sbjct:   90 TFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSG-ARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCC---DAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNT 295          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig190165.5243.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDS6_9PHAE2.630e-3643.84Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBD7_9PHAE6.550e-3544.33Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KQZ7_9PHAE2.230e-3440.10Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K7U5_9PHAE8.370e-3440.10Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLM6_9PHAE8.710e-3440.10Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K3Q1_9PHAE9.960e-3442.65Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K319_9PHAE1.170e-3340.10Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L660_9PHAE3.730e-3341.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9G5_9PHAE1.230e-3239.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMB4_9PHAE1.640e-3242.18Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig190165contigH-elongata_contig190165:589..1191 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score67.8
Seed ortholog evalue6.3e-09
Seed eggNOG ortholog6500.XP_005095538.1
KEGG rclassRC00004,RC00043,RC00070,RC02816
KEGG koko:K01908
KEGG ReactionR00926,R01354
KEGG Pathwayko00640,ko01100,map00640,map01100
EggNOG free text desc.Ribonuclease H protein
EggNOG OGsKOG1075@1,KOG1075@2759
EC6.2.1.17
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01004
Hectar predicted targeting categoryother localisation
Exons2
Model size591
Cds size570
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig190165.5243.1prot_H-elongata_contig190165.5243.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig190165 610..1191 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930087.2973483-UTR-H-elongata_contig190165:588..6091622930087.2973483-UTR-H-elongata_contig190165:588..609Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig190165 589..609 +
1691679275.574508-UTR-H-elongata_contig190165:588..6091691679275.574508-UTR-H-elongata_contig190165:588..609Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig190165 589..609 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930087.3129528-CDS-H-elongata_contig190165:609..10011622930087.3129528-CDS-H-elongata_contig190165:609..1001Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig190165 610..1001 +
1691679275.5864897-CDS-H-elongata_contig190165:609..10011691679275.5864897-CDS-H-elongata_contig190165:609..1001Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig190165 610..1001 +
1622930087.3293896-CDS-H-elongata_contig190165:1013..11911622930087.3293896-CDS-H-elongata_contig190165:1013..1191Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig190165 1014..1191 +
1691679275.5981128-CDS-H-elongata_contig190165:1013..11911691679275.5981128-CDS-H-elongata_contig190165:1013..1191Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig190165 1014..1191 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig190165.5243.1

>prot_H-elongata_contig190165.5243.1 ID=prot_H-elongata_contig190165.5243.1|Name=mRNA_H-elongata_contig190165.5243.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=190bp
MAVDGKHGVGRALDDLNVYDRLGYDAIGLQETRRSGHPAFNQAGYSVYCS
GECGGKNGGKKGQGGVGLAIRTSITRAARPPEFISDRLLKVTLELRGRVK
AVTFFVAYAPTETQNASNKHTFWTSLDRAMEHEQLFVLMDVNARTGRREK
GQVGSKDLKILGAYGRDTLNDNGELLPSFANNHDLALVNT
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mRNA from alignment at H-elongata_contig190165:589..1191+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig190165.5243.1 ID=mRNA_H-elongata_contig190165.5243.1|Name=mRNA_H-elongata_contig190165.5243.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=603bp|location=Sequence derived from alignment at H-elongata_contig190165:589..1191+ (Himanthalia elongata Himel1 dioecious)
GCCACGCAGGACGTCCGGACGATGGCGGTGGATGGGAAGCACGGAGTTGG ACGGGCGCTAGATGATTTGAATGTATACGACCGACTGGGGTACGACGCTA TCGGTCTGCAGGAGACCCGCCGCAGTGGACATCCAGCCTTCAATCAGGCT GGCTACTCGGTGTACTGCAGCGGTGAGTGCGGTGGCAAAAATGGTGGGAA GAAAGGGCAAGGTGGAGTAGGGCTAGCGATTAGAACCTCCATCACACGGG CTGCACGCCCACCGGAGTTTATCAGTGATCGCTTGCTAAAGGTTACACTT GAACTACGGGGTCGAGTCAAGGCCGTTACGTTTTTTGTGGCGTATGCCCC CACTGAAACACAGAATGCTAGTAATAAACATACATTCTGGACGAGCTTGG ATAGAGCTATGGAGTAGGTACCTAGACACGAACAGCTGTTCGTGTTGATG GATGTCAACGCCCGCACGGGAAGGAGGGAGAAGGGACAGGTGGGGAGCAA AGATCTCAAAATTCTCGGTGCCTACGGCCGAGATACCCTCAACGATAACG GAGAGTTACTGCCGTCCTTCGCTAACAACCATGACCTAGCTCTTGTGAAC ACG
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Coding sequence (CDS) from alignment at H-elongata_contig190165:589..1191+

>mRNA_H-elongata_contig190165.5243.1 ID=mRNA_H-elongata_contig190165.5243.1|Name=mRNA_H-elongata_contig190165.5243.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1140bp|location=Sequence derived from alignment at H-elongata_contig190165:589..1191+ (Himanthalia elongata Himel1 dioecious)
ATGGCGGTGGATGGGAAGCACGGAGTTGGACGGGCGCTAGATGATTTGAA
TGTATACGACCGACTGGGGTACGACGCTATCGGTCTGCAGGAGACCCGCC
GCAGTGGACATCCAGCCTTCAATCAGGCTGGCTACTCGGTGTACTGCAGC
GGTGAGTGCGGTGGCAAAAATGGTGGGAAGAAAGGGCAAGGTGGAGTAGG
GCTAGCGATTAGAACCTCCATCACACGGGCTGCACGCCCACCGGAGTTTA
TCAGTGATCGCTTGCTAAAGGTTACACTTGAACTACGGGGTCGAGTCAAG
GCCGTTACGTTTTTTGTGGCGTATGCCCCCACTGAAACACAGAATGCTAG
TAATAAACATACATTCTGGACGAGCTTGGATAGAGCTATGGAATGGCGGT
GGATGGGAAGCACGGAGTTGGACGGGCGCTAGATGATTTGAATGTATACG
ACCGACTGGGGTACGACGCTATCGGTCTGCAGGAGACCCGCCGCAGTGGA
CATCCAGCCTTCAATCAGGCTGGCTACTCGGTGTACTGCAGCGGTGAGTG
CGGTGGCAAAAATGGTGGGAAGAAAGGGCAAGGTGGAGTAGGGCTAGCGA
TTAGAACCTCCATCACACGGGCTGCACGCCCACCGGAGTTTATCAGTGAT
CGCTTGCTAAAGGTTACACTTGAACTACGGGGTCGAGTCAAGGCCGTTAC
GTTTTTTGTGGCGTATGCCCCCACTGAAACACAGAATGCTAGTAATAAAC
ATACATTCTGGACGAGCTTGGATAGAGCTATGGAACACGAACAGCTGTTC
GTGTTGATGGATGTCAACGCCCGCACGGGAAGGAGGGAGAAGGGACAGGT
GGGGAGCAAAGATCTCAAAATTCTCGGTGCCTACGGCCGAGATACCCTCA
ACGATAACGGAGAGTTACTGCCGTCCTTCGCTAACAACCATGACCTAGCT
CTTGTGAACACGACACGAACAGCTGTTCGTGTTGATGGATGTCAACGCCC
GCACGGGAAGGAGGGAGAAGGGACAGGTGGGGAGCAAAGATCTCAAAATT
CTCGGTGCCTACGGCCGAGATACCCTCAACGATAACGGAGAGTTACTGCC
GTCCTTCGCTAACAACCATGACCTAGCTCTTGTGAACACG
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