prot_H-elongata_contig190165.5243.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig190165.5243.1
Unique Nameprot_H-elongata_contig190165.5243.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length190
Homology
BLAST of mRNA_H-elongata_contig190165.5243.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 1.320e-31
Identity = 86/205 (41.95%), Postives = 115/205 (56.10%), Query Frame = 0
Query:    1 MAVDGKHGVGR-ALDDLNVYDRLGYDAIGLQETRRSGHPAFNQAGYSVYCSGECGXXXXXXKGQGGVGLAIRT----SITRAARPPEFISDRLLKVTLELRGRVKAVTFFVAYAPTETQNASN------KHTFWTSLDRAMEH----EQLFVLMDVNARTGRREKGQVGSKDLKILGAYGRDTLNDNGELLPSFANNHDLALVNT 190
            +A  G++ +G   +  + +    G D IGLQETRR+G  +    GY +  SG         +G  GVG+AI+     S+    R  E IS RL+KV L++ GR   VTF V YAPTET   +       K +FWT+LD A+      + L VLMD NARTGRR KG     D KI+GAYGRD +N+NGE L   A+++ L+L NT
Sbjct:  185 LAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSG-ARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRKGCC---DAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNT 384          
BLAST of mRNA_H-elongata_contig190165.5243.1 vs. uniprot
Match: A0A6H5KP87_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP87_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 5.340e-31
Identity = 81/180 (45.00%), Postives = 103/180 (57.22%), Query Frame = 0
Query:   25 DAIGLQETRRSGHPAFNQAGYSVYCSGECGXXXXXXKGQGGVGLAIRT----SITRAARPPEFISDRLLKVTLELRGRVKAVTFFVAYAPTETQ------NASNKHTFWTSLDRAMEH----EQLFVLMDVNARTGRREKGQVGSKDLKILGAYGRDTLNDNGELLPSFANNHDLALVNT 190
            D IGLQETRR+G  A    GY +  SG         +G  GVG+AI+     S+    R  E IS RL+KV L++ GR   VTF V YAPTET       + + K +FWT+LD  +      + L VLMD NARTGRR  G     D KI+GAYGRD +N+NGE L   A ++ L+L+NT
Sbjct:   13 DVIGLQETRRAGQGAITHDGYVIIWSG-ARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDGCC---DAKIMGAYGRDIMNNNGERLLGLAADNRLSLINT 187          
BLAST of mRNA_H-elongata_contig190165.5243.1 vs. uniprot
Match: A0A6H5K7U5_9PHAE (Reverse transcriptase domain-containing protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7U5_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 5.890e-31
Identity = 76/195 (38.97%), Postives = 113/195 (57.95%), Query Frame = 0
Query:    1 MAVDGKHGVGRALDDLNVYDRLGYDAIGLQETRRSGHPAFNQAGYSVYCSGECGXXXXXXKGQGGVGLAIRTSITRAAR-PPEFISDRLLKVTLELRGRVKAVTFFVAYAPTETQNASNKHTFWTSLD----RAMEHEQLFVLMDVNARTGRREKGQVGSKDLKILGAYGRDTLNDNGELLPSFANNHDLALVNT 190
            +AV+G +G GRA   L+   + G   +GLQE RR G   F  +G+ V+    CG       G  GVG+A+  ++ ++++   E++ +RL+ +  E+ G   AVTF  AYAPT+     +KH FW  LD    R    E LFVLMD NA+TG    G +  ++   +G YGR+ LN+NGELL +FA ++ LA++NT
Sbjct:   29 LAVNGANGYGRADSVLHEAAKQGISFVGLQEVRRPGRTEFAASGFRVFT---CGTDKG---GTHGVGIAVEETLCKSSQYTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVATTESKHMFWEKLDSLVRRTPAKEYLFVLMDANAQTG----GGIAGENEGTMGEYGRNELNENGELLLTFATDNRLAVLNT 213          
BLAST of mRNA_H-elongata_contig190165.5243.1 vs. uniprot
Match: A0A6H5JLM6_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLM6_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 6.120e-31
Identity = 76/195 (38.97%), Postives = 113/195 (57.95%), Query Frame = 0
Query:    1 MAVDGKHGVGRALDDLNVYDRLGYDAIGLQETRRSGHPAFNQAGYSVYCSGECGXXXXXXKGQGGVGLAIRTSITRAAR-PPEFISDRLLKVTLELRGRVKAVTFFVAYAPTETQNASNKHTFWTSLD----RAMEHEQLFVLMDVNARTGRREKGQVGSKDLKILGAYGRDTLNDNGELLPSFANNHDLALVNT 190
            +AV+G +G GRA   L+   + G   +GLQE RR G   F  +G+ V+    CG       G  GVG+A+  ++ ++++   E++ +RL+ +  E+ G   AVTF  AYAPT+     +KH FW  LD    R    E LFVLMD NA+TG    G +  ++   +G YGR+ LN+NGELL +FA ++ LA++NT
Sbjct:  520 LAVNGANGYGRADSVLHEAAKQGISFVGLQEVRRPGRTEFAASGFRVFT---CGTDKG---GTHGVGIAVEETLCKSSQYTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVATTESKHMFWEKLDSLVRRTPAKEYLFVLMDANAQTG----GGIAGENEGTMGEYGRNELNENGELLLTFATDNRLAVLNT 704          
BLAST of mRNA_H-elongata_contig190165.5243.1 vs. uniprot
Match: A0A6H5L660_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L660_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 6.480e-31
Identity = 83/205 (40.49%), Postives = 110/205 (53.66%), Query Frame = 0
Query:    1 MAVDGKHGVGR-ALDDLNVYDRLGYDAIGLQETRRSGHPAFNQAGYSVYCSGECGXXXXXXKGQGGVGLAIRT----SITRAARPPEFISDRLLKVTLELRGRVKAVTFFVAYAPTETQNASN------KHTFWTSLDRAME----HEQLFVLMDVNARTGRREKGQVGSKDLKILGAYGRDTLNDNGELLPSFANNHDLALVNT 190
            +A  G++ +G   +  + +    G D IGLQETRR G  +    GY +  SG         +G  GVG+AI+     S+    R  E I  RL+KV L + GR   +TF V YAPTET   +       K +FWT+LD  +     H+ L VLMD NARTGRR  G     D KI+G YGRD +N+NGE L   A+N+ L+L NT
Sbjct:  158 LAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSG-ARAGTKDKRGVHGVGIAIKETMWESVGEEGRKVECIGPRLMKVRLRI-GRTCGITFVVRYAPTETVRTTAGGDINAKDSFWTALDAVIREVHSHDHLVVLMDANARTGRRRDGCC---DAKIMGVYGRDIMNNNGERLLGLASNNQLSLTNT 357          
BLAST of mRNA_H-elongata_contig190165.5243.1 vs. uniprot
Match: A0A6H5K319_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K319_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 8.230e-31
Identity = 76/195 (38.97%), Postives = 113/195 (57.95%), Query Frame = 0
Query:    1 MAVDGKHGVGRALDDLNVYDRLGYDAIGLQETRRSGHPAFNQAGYSVYCSGECGXXXXXXKGQGGVGLAIRTSITRAAR-PPEFISDRLLKVTLELRGRVKAVTFFVAYAPTETQNASNKHTFWTSLD----RAMEHEQLFVLMDVNARTGRREKGQVGSKDLKILGAYGRDTLNDNGELLPSFANNHDLALVNT 190
            +AV+G +G GRA   L+   + G   +GLQE RR G   F  +G+ V+    CG       G  GVG+A+  ++ ++++   E++ +RL+ +  E+ G   AVTF  AYAPT+     +KH FW  LD    R    E LFVLMD NA+TG    G +  ++   +G YGR+ LN+NGELL +FA ++ LA++NT
Sbjct:  316 LAVNGANGYGRADSVLHEAAKQGISFVGLQEVRRPGRTEFAASGFRVFT---CGTDKG---GTHGVGIAVEETLCKSSQYTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVATTESKHMFWEKLDSLVRRIPAKEYLFVLMDANAQTG----GGIAGENEGTMGEYGRNELNENGELLLTFATDNRLAVLNT 500          
BLAST of mRNA_H-elongata_contig190165.5243.1 vs. uniprot
Match: A0A6H5JMB4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMB4_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 2.040e-30
Identity = 85/205 (41.46%), Postives = 115/205 (56.10%), Query Frame = 0
Query:    1 MAVDGKHGVGR-ALDDLNVYDRLGYDAIGLQETRRSGHPAFNQAGYSVYCSGECGXXXXXXKGQGGVGLAIRT----SITRAARPPEFISDRLLKVTLELRGRVKAVTFFVAYAPTETQ------NASNKHTFWTSLDRAMEH----EQLFVLMDVNARTGRREKGQVGSKDLKILGAYGRDTLNDNGELLPSFANNHDLALVNT 190
            +A  G++ +G   +  + +    G D IGLQETRR+G  +    GY +  SG         +G  GVG+AI+     S+    R  E IS RL+KV L++ GR   VTF V YAPTET       + + K +FWT+LD A+      + L VLMD NARTGRR  G     D KI+GAYGRD +N+NGE L   A+++ L+L NT
Sbjct:   96 LAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSG-ARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCC---DAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNT 295          
BLAST of mRNA_H-elongata_contig190165.5243.1 vs. uniprot
Match: A0A6H5K1H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H7_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 5.070e-30
Identity = 85/205 (41.46%), Postives = 114/205 (55.61%), Query Frame = 0
Query:    1 MAVDGKHGVGR-ALDDLNVYDRLGYDAIGLQETRRSGHPAFNQAGYSVYCSGECGXXXXXXKGQGGVGLAIRT----SITRAARPPEFISDRLLKVTLELRGRVKAVTFFVAYAPTETQ------NASNKHTFWTSLDRAMEH----EQLFVLMDVNARTGRREKGQVGSKDLKILGAYGRDTLNDNGELLPSFANNHDLALVNT 190
            +A  G++ +G   +  + +    G D IGLQETRR G  +    GY +  SG         +G  GVG+AI+     S+    R  E IS RL+KV L++ GR   VTF V YAPTET       + + K +FWT+LD A+      + L VLMD NARTGRR  G     D KI+GAYGRD +N+NGE L   A+++ L+L NT
Sbjct:  667 LAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSG-ARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVRYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCC---DAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNT 866          
BLAST of mRNA_H-elongata_contig190165.5243.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 5.430e-30
Identity = 81/189 (42.86%), Postives = 105/189 (55.56%), Query Frame = 0
Query:   16 LNVYDRLGYDAIGLQETRRSGHPAFNQAGYSVYCSGECGXXXXXXKGQGGVGLAIRT----SITRAARPPEFISDRLLKVTLELRGRVKAVTFFVAYAPTETQ------NASNKHTFWTSLDRAMEH----EQLFVLMDVNARTGRREKGQVGSKDLKILGAYGRDTLNDNGELLPSFANNHDLALVNT 190
            + +    G D IGLQETRR G  +    GY +  SG         +G  GVG+AI+     S+    R  E IS RL+KV L++ GR   VTF V YAPTET       + + K +FWT+LD A+      + L VLMD NARTGRR  G     D K+LGAYGRD +N+NGE L   A+++  +L NT
Sbjct:    4 MQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSG-ARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRGGCC---DAKVLGAYGRDIMNNNGERLFGLASDNQFSLANT 187          
BLAST of mRNA_H-elongata_contig190165.5243.1 vs. uniprot
Match: A0A6H5KTK0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTK0_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 5.550e-30
Identity = 83/189 (43.92%), Postives = 105/189 (55.56%), Query Frame = 0
Query:   16 LNVYDRLGYDAIGLQETRRSGHPAFNQAGYSVYCSGECGXXXXXXKGQGGVGLAIRT----SITRAARPPEFISDRLLKVTLELRGRVKAVTFFVAYAPTET--QNASN----KHTFWTSLDRAME----HEQLFVLMDVNARTGRREKGQVGSKDLKILGAYGRDTLNDNGELLPSFANNHDLALVNT 190
            + +    G D IGLQETRR G  +    GY +  SG         +G  GVG+AI+     S+    R  E IS RL+KV L++ GR   VTF V YAPTET   NA      K +FWT+LD  M     H+ L V MD NARTGR+  G     D KI+GAYG DT+N+NGE L   A+++ L+L NT
Sbjct:    4 MQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSG-ARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTNAGGDVHAKESFWTALDAVMREVHSHDHLVVPMDANARTGRKRDGCC---DAKIMGAYGHDTMNNNGERLLGLASDNQLSLTNT 187          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig190165.5243.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K3Q1_9PHAE1.320e-3141.95Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KP87_9PHAE5.340e-3145.00Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5K7U5_9PHAE5.890e-3138.97Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLM6_9PHAE6.120e-3138.97Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L660_9PHAE6.480e-3140.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K319_9PHAE8.230e-3138.97Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JMB4_9PHAE2.040e-3041.46Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K1H7_9PHAE5.070e-3041.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBZ6_9PHAE5.430e-3042.86Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KTK0_9PHAE5.550e-3043.92Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 10..190
e-value: 1.2E-16
score: 62.8
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 17..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig190165contigH-elongata_contig190165:610..1191 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig190165.5243.1mRNA_H-elongata_contig190165.5243.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig190165 589..1191 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig190165.5243.1 ID=prot_H-elongata_contig190165.5243.1|Name=mRNA_H-elongata_contig190165.5243.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=190bp
MAVDGKHGVGRALDDLNVYDRLGYDAIGLQETRRSGHPAFNQAGYSVYCS
GECGGKNGGKKGQGGVGLAIRTSITRAARPPEFISDRLLKVTLELRGRVK
AVTFFVAYAPTETQNASNKHTFWTSLDRAMEHEQLFVLMDVNARTGRREK
GQVGSKDLKILGAYGRDTLNDNGELLPSFANNHDLALVNT
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf