mRNA_H-elongata_contig18692.5090.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig18692.5090.1
Unique NamemRNA_H-elongata_contig18692.5090.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig18692.5090.1 vs. uniprot
Match: A0A6H5L2L5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2L5_9PHAE)

HSP 1 Score: 356 bits (914), Expect = 1.180e-113
Identity = 172/197 (87.31%), Postives = 187/197 (94.92%), Query Frame = 1
Query:  325 KKPRKPLLPVSLSKALVAGVFVLGIGTGVTVDSAINTNPKDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVTQADTKPGCVLRPANVVEVLQEKRGLLTKDEVESCKSGMNTWGFVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAAKKSAGSEPANGPRIMSNTVRSSPSDR 915
            K+P+ PLLP +LSKAL+AGVFVLGIGTGVTVDSAINT+P+DLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHV+QADTKPGCVLR +NVVEVLQ KRGLLT ++VE CK GMNTWG+VGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAAKKSAGSEPANGPR+MS TV++  +DR
Sbjct:  111 KRPKVPLLPTTLSKALIAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRSSNVVEVLQRKRGLLTNEDVEKCKGGMNTWGYVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAAKKSAGSEPANGPRVMSGTVQTVVTDR 307          
BLAST of mRNA_H-elongata_contig18692.5090.1 vs. uniprot
Match: A0A836CMQ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMQ9_9STRA)

HSP 1 Score: 271 bits (693), Expect = 3.670e-81
Identity = 139/200 (69.50%), Postives = 158/200 (79.00%), Query Frame = 1
Query:  319 ERKKPRKPLLPVSLSKALVAGVFVLGIGTGVTVDSAINTNPKDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVTQADTKPGCVLRPANVVEVLQEKRGLLTKDEVESCKSGMNTWGFVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAA-----AAKKSAGSEPANGPRIMSNTVRSS 903
            ER++ +     V + KAL+AG+FVLGIGTGVTVDSAINTNPKDLASRDAIDRNAPNP ICQTYGSSAMVVD+RVFVTFNPFS++V QAD KPGCVLR +N V+VL+ +R L+   EVE+CK GMNTW FVGDLN  PQLSCVYQSDDAQNEF+S+PK GLGEDVYDDDRAA     AA+  A S    GP+     V  S
Sbjct:  100 ERRRDKGFFNSVKIPKALLAGIFVLGIGTGVTVDSAINTNPKDLASRDAIDRNAPNPGICQTYGSSAMVVDERVFVTFNPFSIYVAQADVKPGCVLRQSNFVQVLK-RRNLINDAEVETCKGGMNTWAFVGDLNGKPQLSCVYQSDDAQNEFVSDPKIGLGEDVYDDDRAAEQAARAARAVAASATKPGPQAQGMQVEGS 298          
BLAST of mRNA_H-elongata_contig18692.5090.1 vs. uniprot
Match: A0A7S2UF23_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UF23_9STRA)

HSP 1 Score: 258 bits (659), Expect = 4.000e-76
Identity = 133/194 (68.56%), Postives = 154/194 (79.38%), Query Frame = 1
Query:  262 DDLFYASDGLADEGSPVFKERKKPRKPLLPVSLSKALVAGVFVLGIGTGVTVDSAINTNPKDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVTQADTKPGCVLRPANVVEVLQEKRGLLTKDEVESCKSGMNTWGFVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAAKK 843
            DDL    DGL D  SP F  R   R   LP S+SK+L+AG+FVLGIGTGVTVDSAINTN +DLASRDAIDRNAPNP +C TYG+SAM  DQRVFV+FNPF+++V QAD KP CVLRPAN+V +L+E R ++   EV SCK  MNTW +VGDL+D PQLSCVYQS+DAQNEFLSNPK G+GEDV+DDDRA A  K
Sbjct:   94 DDLGEGKDGL-DVPSP-FGRRSGLR---LPDSVSKSLLAGIFVLGIGTGVTVDSAINTNERDLASRDAIDRNAPNPELCSTYGASAMAFDQRVFVSFNPFAVYVAQADVKPACVLRPANIVPILRE-RNMINDAEVRSCKKNMNTWAYVGDLDDMPQLSCVYQSEDAQNEFLSNPKLGIGEDVWDDDRAKATGK 281          
BLAST of mRNA_H-elongata_contig18692.5090.1 vs. uniprot
Match: A0A7R9WGK2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WGK2_9STRA)

HSP 1 Score: 251 bits (641), Expect = 6.780e-75
Identity = 119/168 (70.83%), Postives = 145/168 (86.31%), Query Frame = 1
Query:  346 LPVSLSKALVAGVFVLGIGTGVTVDSAINTNPKDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVTQADTKPGCVLRPANVVEVLQEKRGLLTKDEVESCKSGMNTWGFVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAAKKSA 849
            LP S+SKAL+AG+FVLGIGTGVT++S INT+PKDLASRDAIDRNAPNP +C  YG+SAM  DQRVFV+FNPF+++V QAD KP CVLR +NVV+VL+E++ L+  +EV +CK  +NTW FVGDL++ PQLSCVYQSDDAQNEFLSNPK G+GEDVYDDDRA+  +K A
Sbjct:   16 LPESVSKALLAGIFVLGIGTGVTIESQINTSPKDLASRDAIDRNAPNPTLCAQYGASAMAFDQRVFVSFNPFNVYVAQADVKPACVLRQSNVVQVLRERK-LINDNEVRTCKQKVNTWAFVGDLDNMPQLSCVYQSDDAQNEFLSNPKLGIGEDVYDDDRASLERKRA 182          
BLAST of mRNA_H-elongata_contig18692.5090.1 vs. uniprot
Match: A0A7S4WJP8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4WJP8_9STRA)

HSP 1 Score: 255 bits (651), Expect = 6.790e-75
Identity = 122/168 (72.62%), Postives = 140/168 (83.33%), Query Frame = 1
Query:  346 LPVSLSKALVAGVFVLGIGTGVTVDSAINTNPKDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVTQADTKPGCVLRPANVVEVLQEKRGLLTKDEVESCKSGMNTWGFVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAAKKSA 849
            LP S+SKAL+AGVFVLGIGTGVT+DS INTNPKDLASRDA+DRNAPNP +C TYG+ AM  DQRVFV+FNPF+++V QAD KP CVLRPANVV +L+EK  L+   EV SCK  MNTW FVGDL D PQLSCVY+S+DAQNEFLSNPK G+GEDV+DDDR    K +A
Sbjct:  123 LPASVSKALLAGVFVLGIGTGVTIDSQINTNPKDLASRDAVDRNAPNPELCTTYGAPAMAFDQRVFVSFNPFNVYVAQADVKPACVLRPANVVPILREKN-LINDAEVRSCKQNMNTWAFVGDLQDMPQLSCVYKSEDAQNEFLSNPKLGIGEDVWDDDREKMMKNAA 289          
BLAST of mRNA_H-elongata_contig18692.5090.1 vs. uniprot
Match: A0A7S2SJB4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJB4_9STRA)

HSP 1 Score: 252 bits (643), Expect = 1.490e-74
Identity = 123/166 (74.10%), Postives = 141/166 (84.94%), Query Frame = 1
Query:  343 LLPVSLSKALVAGVFVLGIGTGVTVDSAINTNPKDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVTQADTKPGCVLRPANVVEVLQEKRGLLTKDEVESCKSGMNTWGFVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAAK 840
            L P  L+  L+AGVFVLGIGTGVTVDSAINTNPKDLASRDAIDR APN  +CQ YG+SAMV+DQR+FVTFNPF+++VTQADTKPGCVLR +NVV VLQ K GLL +DE+ +CK+ MNTWGFVG L+D PQLSCVY+S DAQNEFLSNPK GLGED+YD+    A K
Sbjct:   82 LFPKQLTNYLLAGVFVLGIGTGVTVDSAINTNPKDLASRDAIDRAAPNAELCQQYGASAMVMDQRLFVTFNPFNVYVTQADTKPGCVLRSSNVVPVLQGK-GLLDRDEIAACKNNMNTWGFVGTLDDRPQLSCVYKSQDAQNEFLSNPKIGLGEDIYDNGIPGAGK 246          
BLAST of mRNA_H-elongata_contig18692.5090.1 vs. uniprot
Match: A0A7S3PTW4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PTW4_9STRA)

HSP 1 Score: 254 bits (648), Expect = 2.030e-74
Identity = 125/177 (70.62%), Postives = 148/177 (83.62%), Query Frame = 1
Query:  346 LPVSLSKALVAGVFVLGIGTGVTVDSAINTNPKDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVTQADTKPGCVLRPANVVEVLQEKRGLLTKDEVESCKSGMNTWGFVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAA--AAKKSAGSEPANG 870
            LP S+S AL+AGVFVLGIGTGVTVDS INT+PKDLASRDA+D+ APNP +C TYG+SAM  DQRVFV+FNPF+++V QAD KP CVLR +NVV VLQ+ RGL+   EV SCK  MNTW FVGDLND+PQLSCVY+S+DAQNEFLS+PKYG+GEDV+DDDR A  AA+K +  +  NG
Sbjct:  111 LPESVSTALLAGVFVLGIGTGVTVDSQINTSPKDLASRDAVDQAAPNPRLCSTYGASAMAFDQRVFVSFNPFNVYVAQADVKPACVLRASNVVPVLQD-RGLINGKEVRSCKQNMNTWAFVGDLNDYPQLSCVYRSEDAQNEFLSDPKYGIGEDVWDDDRVAIEAARKGSVKKVKNG 286          
BLAST of mRNA_H-elongata_contig18692.5090.1 vs. uniprot
Match: A0A7S4I7G3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I7G3_9STRA)

HSP 1 Score: 248 bits (632), Expect = 3.610e-72
Identity = 128/204 (62.75%), Postives = 154/204 (75.49%), Query Frame = 1
Query:  262 DDLFYASDGLADEGSPVFKERKKPRKPLLPVSLSKALVAGVFVLGIGTGVTVDSAINTNPKDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVTQADTKPGCVLRPANVVEVLQEKRGLLTKDEVESCKSGMNTWGFVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAA-KKSAGSEPANG 870
            DDL  +  G   E    F  R   R   LP S+SKAL+AG+FVLGIG GV ++S +NT+PKDLASRDAID+NAPNP +C  YG+SAM  DQRVFV+FNPF+++V QAD KP CVLR +NVV+VL+E R L+  +EV SCK  +NTW FVGDL+  PQ+SCVYQSDDAQNEFLSNPK G+GEDVYDDDRAA   KKS G +  +G
Sbjct:   92 DDLGTSDGGAGMEVPSPFGLRSGLR---LPDSVSKALLAGIFVLGIGAGVAIESQVNTSPKDLASRDAIDKNAPNPTLCAQYGASAMAFDQRVFVSFNPFNVYVAQADVKPACVLRQSNVVQVLKE-RNLINDNEVRSCKQKVNTWAFVGDLDSMPQISCVYQSDDAQNEFLSNPKLGIGEDVYDDDRAALERKKSTGKQIKSG 291          
BLAST of mRNA_H-elongata_contig18692.5090.1 vs. uniprot
Match: K0SH28_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SH28_THAOC)

HSP 1 Score: 245 bits (626), Expect = 1.520e-71
Identity = 118/167 (70.66%), Postives = 139/167 (83.23%), Query Frame = 1
Query:  346 LPVSLSKALVAGVFVLGIGTGVTVDSAINTNPKDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVTQADTKPGCVLRPANVVEVLQEKRGLLTKDEVESCKSGMNTWGFVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAAKKS 846
            +P S+S AL+AGVFVLGIGTGVTVDS INTNPKDLASRDA+D+NAPNP +C TYG+SAM  DQRVFV+FNPF+++V QAD KP CVLRP+NVV VL+E++ LL  +EV  CK  MNTW FVGDLND PQLSCVY+S+DAQNEFL +PK G+GED  DDD   A+K S
Sbjct:  100 MPSSVSAALLAGVFVLGIGTGVTVDSQINTNPKDLASRDAVDKNAPNPTLCTTYGASAMAFDQRVFVSFNPFNVYVAQADVKPACVLRPSNVVPVLKERK-LLNDNEVRGCKMNMNTWAFVGDLNDQPQLSCVYKSEDAQNEFLEDPKRGIGEDYLDDDIDRASKVS 265          
BLAST of mRNA_H-elongata_contig18692.5090.1 vs. uniprot
Match: A0A7R9WZG6_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WZG6_9STRA)

HSP 1 Score: 241 bits (615), Expect = 1.050e-70
Identity = 114/161 (70.81%), Postives = 137/161 (85.09%), Query Frame = 1
Query:  346 LPVSLSKALVAGVFVLGIGTGVTVDSAINTNPKDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVTQADTKPGCVLRPANVVEVLQEKRGLLTKDEVESCKSGMNTWGFVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRA 828
            LP S+S+A++AGVFVLGIG GVT+DSAINTNP+DLASRDAID+ APN ++C  YG+SAM  DQRVFV+FNPF+++V QAD KP CVLRP+NVV +L++ R L+  DEV SCK+ MNTW FVG+L D PQLSCVY+S DAQNEFLSNPKYG+GED  DDDRA
Sbjct:   47 LPASVSQAVLAGVFVLGIGLGVTIDSAINTNPRDLASRDAIDQAAPNSSLCANYGASAMAFDQRVFVSFNPFNVYVAQADVKPACVLRPSNVVPILKQ-RNLINDDEVRSCKANMNTWAFVGNLGDAPQLSCVYKSADAQNEFLSNPKYGIGEDYLDDDRA 206          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18692.5090.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2L5_9PHAE1.180e-11387.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CMQ9_9STRA3.670e-8169.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UF23_9STRA4.000e-7668.56Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7R9WGK2_9STRA6.780e-7570.83Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S4WJP8_9STRA6.790e-7572.62Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S2SJB4_9STRA1.490e-7474.10Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3PTW4_9STRA2.030e-7470.62Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S4I7G3_9STRA3.610e-7262.75Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
K0SH28_THAOC1.520e-7170.66Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7R9WZG6_9STRA1.050e-7070.81Hypothetical protein n=1 Tax=Craspedostauros austr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18692contigH-elongata_contig18692:2451..6147 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score242.7
Seed ortholog evalue1e-61
Seed eggNOG ortholog2880.D7FW84
EggNOG free text desc.Protein of unknown function (DUF3172)
EggNOG OGs28NVC@1,2S1FT@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein of unknown function DUF3172
Ec32 orthologEc-01_003760.1
Exons4
Model size2371
Cds size408
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18692.5090.1prot_H-elongata_contig18692.5090.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig18692 3895..5407 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930068.754153-UTR-H-elongata_contig18692:2450..38941622930068.754153-UTR-H-elongata_contig18692:2450..3894Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18692 2451..3894 -
1691679268.8330657-UTR-H-elongata_contig18692:2450..38941691679268.8330657-UTR-H-elongata_contig18692:2450..3894Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18692 2451..3894 -
1622930068.8777735-UTR-H-elongata_contig18692:5407..55601622930068.8777735-UTR-H-elongata_contig18692:5407..5560Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18692 5408..5560 -
1691679268.8637764-UTR-H-elongata_contig18692:5407..55601691679268.8637764-UTR-H-elongata_contig18692:5407..5560Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18692 5408..5560 -
1622930068.896793-UTR-H-elongata_contig18692:5781..61471622930068.896793-UTR-H-elongata_contig18692:5781..6147Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18692 5782..6147 -
1691679268.8738573-UTR-H-elongata_contig18692:5781..61471691679268.8738573-UTR-H-elongata_contig18692:5781..6147Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18692 5782..6147 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930068.7943752-CDS-H-elongata_contig18692:3894..40321622930068.7943752-CDS-H-elongata_contig18692:3894..4032Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18692 3895..4032 -
1691679268.8421988-CDS-H-elongata_contig18692:3894..40321691679268.8421988-CDS-H-elongata_contig18692:3894..4032Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18692 3895..4032 -
1622930068.8183804-CDS-H-elongata_contig18692:4848..50581622930068.8183804-CDS-H-elongata_contig18692:4848..5058Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18692 4849..5058 -
1691679268.849352-CDS-H-elongata_contig18692:4848..50581691679268.849352-CDS-H-elongata_contig18692:4848..5058Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18692 4849..5058 -
1622930068.8615232-CDS-H-elongata_contig18692:5347..54071622930068.8615232-CDS-H-elongata_contig18692:5347..5407Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18692 5348..5407 -
1691679268.856544-CDS-H-elongata_contig18692:5347..54071691679268.856544-CDS-H-elongata_contig18692:5347..5407Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18692 5348..5407 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig18692.5090.1

>prot_H-elongata_contig18692.5090.1 ID=prot_H-elongata_contig18692.5090.1|Name=mRNA_H-elongata_contig18692.5090.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp
MVVDQRVFVTFNPFSLHVTQADTKPGCVLRPANVVEVLQEKRGLLTKDEV
ESCKSGMNTWGFVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDD
DRAAAAKKSAGSEPANGPRIMSNTVRSSPSDRPSI*
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mRNA from alignment at H-elongata_contig18692:2451..6147-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig18692.5090.1 ID=mRNA_H-elongata_contig18692.5090.1|Name=mRNA_H-elongata_contig18692.5090.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3697bp|location=Sequence derived from alignment at H-elongata_contig18692:2451..6147- (Himanthalia elongata Himel1 dioecious)
CTGCCTCTGCCCTTGCAGACGGCGGGATTCGTGCATTTTTCTGGCGGCCC CTCGCGATCTGCCGTGGAACGCCGAGCCGCAGGCTGTGGAGGCGTTCGTC ACCGGGGCGTGCTGAGCCGACAACAACCTCGGGGGACGGTCGCGATTGGT CGAGGCGGTAAAGCACTCAGCGCTCAGCGTAGTAGACGTCCGAGCCGAGA AGACCAGTCCTTCGACGACTATTACAATGACGGCGACTATGACAACGGCG GCGACTACGACGATGACTTGTTTTACGCCAGTGACGGCCTGGCAGACGAA GGTTCTCCGGTCTTCAAAGAGAGAAAGAAACCCAGAAAACCCCTGTTACC GGTCAGCCTTAGCAAGGTACTATTTCTAATATGTTGGTGGTATGGCACAT ACGAGGGGATTTACAATGTGGTGGTCGTATTATAGTTGATGTCAAGACAG ACGGTAGGTTCGAACAGCGACCCAACTGTAACAGCCCTTTCTTCTCTTCA ACTGTTATGTCACTACTACTGCACTGGAGTGCGCCTCACAGTGAGCTGAG CCAGAGCACGCCTCCAAACCACACCGGGCCTTGTTAGGCCCTCGTCGCAG GCGTTTTCGTCCTGGGAATCGGCACTGGCGTGACCGTGGACTCGGCGATC AACACGAACCCAAAGGACCTCGCGAGCCGAGACGCCATCGACCGAAACGC GCCTAACCCCAACATATGCCAGACGTACGGTTCGAGCGCCATGGTGGTTG ATCAGAGGGTGTTCGTCACCTTCAACCCCTTCAGCTTACACGTCACACAG GCACGTCGCACGGACGAGAGGCTGAACGATCGATGGAGGCGCACGAAAAG TTCACTTCCTTCCTCCGTTTCTCTTGTGTTTTTGTCTACACTTATTATAC TTTAGCTTGAACATTTATTGTAGCCATTACTATACTAGGCTCTAGAGAAC CAGAGTCGGGAATATTTTGAGAGGTACGGGCTGGTCTCGTGGGCACCAGA CAGCCGTTGTCCTCCACACCATAGCACAAACGCAAGCCCGCCAACGGTCG CGCACATGCCTACGCTCAATACCCTCCCGCATCCACCAGGCAGACACGAA GCCCGGGTGCGTCTTGCGGCCTGCGAACGTGGTGGAGGTGCTGCAGGAGA AGCGGGGGCTGCTGACGAAGGATGAGGTGGAGTCGTGCAAATCTGGCATG AACACGTGGGGGTTCGTGGGAGACCTCAACGACCACCCGCAACTGTCGTG CGTCTACCAGAGCGATGACGCGCAAAACGAATTCCTCAGCAACCCCAAGG TACACTACGGTACAATTCAAAGTAATAGTAGAGAGCAGTAGGGTATAGCA GAGTCTAGATTCGTCGGATATATAGCTCATACGGTACCTGGTCGCGTTTG ATGTCCCATGAAGCGGAAAGCGTCGTGGGTGTTGGAACGGTCATGGATGC CGTAAAGAATCTTCTTGTCTTAGGCGAGCTTGCGGCTACCACGGGAAGCC AATGAAGCGTATCTCCTTGGCCTCGGCTCTTGCGCTGCGTCGGCAATATT TCCGCGACACTTCTGCGCTCGTCGCGCGAGACCGTCTTACGTACGCACAA CTCTTTTACGTGCTGCTGATAAGTTAGCGGTTGGGGCTCCCGTAGACCGT ATCGACCAAGTGTGTAAGGACGCGGCTTTGGGTCGATCAAGGCGCCACTT CCGAGGTTTTACGAGCGTCAGGTCGTCGCCACTCCGGATGAGTTCGCTCT CTCTCCGAACCTTTGGATGGCACGCGCTGATCGAAATTGGTCACGCCGCG TCACACAACTCCTCGTCGTCTAGCCTTGCCTCCAGAAGCAGCGCCACACA CGGGGGGGACCCCCACCAATAAACCTCTTTCCTTTCCCATTTCCTCGGCT CTTTTATTTATTTGATTCTTGGACGCAACCCACTGTAAATTGTCCGTTCA GCGTCCCAAAATAAGACATACCGTTTGATTTCGGGAGCAGAAAAAATGTT TGAGCCATCTCGTGGCAAGACAGGTATCCACGAACAAACCCCTTGCCGTA TGTAGTTAACCGTGTAAATTCCCTCCCCTCCCCTGACATTACCTTACCTG ACCCGTCGGTGGCAGTACGGCTTGGGCGAGGACGTGTACGACGATGACAG AGCGGCTGCGGCGAAGAAGAGCGCGGGAAGCGAGCCGGCAAACGGCCCCC GAATCATGTCCAACACCGTTCGCTCTTCTCCATCCGACCGCCCATCGATA TGATGCACGAGTGGGGAGCTCAGCTCAGACTCTCAAGACCGAGTCGAGTC GACCCAACCCTGCCCGTCCAATCCTTTAGCGTACAGGGAGCGGTTGTGGG TGGCACCGAGATTCGGAGCCGAGAAGTGGACAAGATATCATGTGGTACAC GCCCCCCACCCGTCCGCGAGTATTAGTGCTCCGAAGCCGGAGTTGGTTTT GGATCGGCAGGTTCGTCGGTTTGTGTTGATTTGCCTCATATTTCCAAGCT AGGGGGGTTTTCTTGATGTTGGAACTCCTGTGCGCGGAGCGGATATCCCT GTCTCATCGCCAAGTTAAGATGGTGACAGACACGGACATACGCATAAGAT TTCCCCGATCCCAAACGCCAACAAGCCCATATTACCAACACGCGTTCAGG TTTGGTCGTTGTAGATCGGCGTCTAGGTTTTCGCGTCCACTTGTAGAATA CGTTCATTAAAAAAAGTGGATGAACGACACACATAGTGGGGCCTCACTAC AATGCTCGCCTCCGCACAGAGCAAAGAAATGGTTGGTTTGACGCGGTCGG TGGGTCATGGCAATTATAAACACACACACACACACACACACACGGCTTCG TTCCTACTCTACGTTACCAGCCTCCTAAACGTGGCGCACCATGAGCGCCG CACACAGCACGCAACCATGCACCTTTACGCACTTCGAGCGGTCGATTTAA ATAGTGGCTCTCTCCCGGGTAGTCTCCACCATACCAGCACAACCAGAGGA AGCACATCCACGCCCCTAGGGTATGCACATATTCGGAGGCGTTTCCTAGG CACCACGCGGTAGTGCTCGCGGTGGTTTCGGTTTCATAATTCCTTCCTTA CACGTTAAGAGAACCAACTAGGACACACCCCGGACGCGTTGAACATGCAA GAGTATAGCATCATAAGAGTATTTTTTAAGTATTGGAGTCGTTTTAGTGA CGTCAGAATTATTTTCGAAGGGACGAACACGCGCCTTGCCGAAGGACACC GAGACTCTTTCCTCAGCGTCATCATAACACTAGCGAGACCAAAATGGGAT TTCAATGTATCAGGAGAGCCTAAATGGCGTTTTCACTCTGTAAACCAGCG CAAATATGTTTTCTGGCCAGCAGCCGACTTTTAGAAACGAAGACCTCTCC ACCGATACCTTTGTTTTTAATTGATCATATAAAGGTATGTGGACCGAGCC TCGCTTCTGCCAAAAACAAATATCCTGGTGGCGCGATTGACTTCGCCCAC ATGACATAAAAGGGATAAGTGTTTAGCATTCGCTCTCTACGAAACCCTTC AAATTTAAACGCAGGTTCATCGATGTCGGCGCACCTCAACAAGGTCGACA AGGCTTGATTGACGGCACGGAACAGATACTAAGACAGGCGGTAGACAACC TTTGTTCCGGACAGACGAAACACACACATTAAAGAGAGAAATCGTTA
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Coding sequence (CDS) from alignment at H-elongata_contig18692:2451..6147-

>mRNA_H-elongata_contig18692.5090.1 ID=mRNA_H-elongata_contig18692.5090.1|Name=mRNA_H-elongata_contig18692.5090.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=816bp|location=Sequence derived from alignment at H-elongata_contig18692:2451..6147- (Himanthalia elongata Himel1 dioecious)
ATGGTGGTTGATCAGAGGGTGTTCGTCACCTTCAACCCCTTCAGCTTACA
CGTCACACAGATGGTGGTTGATCAGAGGGTGTTCGTCACCTTCAACCCCT
TCAGCTTACACGTCACACAGGCAGACACGAAGCCCGGGTGCGTCTTGCGG
CCTGCGAACGTGGTGGAGGTGCTGCAGGAGAAGCGGGGGCTGCTGACGAA
GGATGAGGTGGAGTCGTGCAAATCTGGCATGAACACGTGGGGGTTCGTGG
GAGACCTCAACGACCACCCGCAACTGTCGTGCGTCTACCAGAGCGATGAC
GCGCAAAACGAATTCCTCAGCAACCCCAAGGCAGACACGAAGCCCGGGTG
CGTCTTGCGGCCTGCGAACGTGGTGGAGGTGCTGCAGGAGAAGCGGGGGC
TGCTGACGAAGGATGAGGTGGAGTCGTGCAAATCTGGCATGAACACGTGG
GGGTTCGTGGGAGACCTCAACGACCACCCGCAACTGTCGTGCGTCTACCA
GAGCGATGACGCGCAAAACGAATTCCTCAGCAACCCCAAGTACGGCTTGG
GCGAGGACGTGTACGACGATGACAGAGCGGCTGCGGCGAAGAAGAGCGCG
GGAAGCGAGCCGGCAAACGGCCCCCGAATCATGTCCAACACCGTTCGCTC
TTCTCCATCCGACCGCCCATCGATATGATACGGCTTGGGCGAGGACGTGT
ACGACGATGACAGAGCGGCTGCGGCGAAGAAGAGCGCGGGAAGCGAGCCG
GCAAACGGCCCCCGAATCATGTCCAACACCGTTCGCTCTTCTCCATCCGA
CCGCCCATCGATATGA
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