mRNA_H-elongata_contig183793.4947.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig183793.4947.1 vs. uniprot
Match: D7FY11_ECTSI (NodB homology domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY11_ECTSI) HSP 1 Score: 141 bits (355), Expect = 1.010e-39 Identity = 64/76 (84.21%), Postives = 71/76 (93.42%), Query Frame = 1
Query: 1 VYACAMALDRNPEAAKAMVDAGWEVASHGYRWIDYQYVDEETEREHIRKAVEITERVCGRRPVGIYQGKPNANTRR 228
VYACAMAL+RNP A +AMV+AGWEVASHGYRWIDYQYVDE TEREHIRKAV+IT +VCG+RPVGIYQGKPN NTR+
Sbjct: 115 VYACAMALERNPAAGRAMVEAGWEVASHGYRWIDYQYVDEATEREHIRKAVDITAKVCGKRPVGIYQGKPNPNTRK 190
BLAST of mRNA_H-elongata_contig183793.4947.1 vs. uniprot
Match: A0A8K1FLP4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FLP4_PYTOL) HSP 1 Score: 130 bits (326), Expect = 2.910e-35 Identity = 59/76 (77.63%), Postives = 68/76 (89.47%), Query Frame = 1
Query: 1 VYACAMALDRNPEAAKAMVDAGWEVASHGYRWIDYQYVDEETEREHIRKAVEITERVCGRRPVGIYQGKPNANTRR 228
VYA +AL++NP+AAKAMV+AGWEVASHGYRWIDYQ VDE TEREHIRK +E+ ER+ G+RPVGIYQGKPN NTRR
Sbjct: 99 VYAVGLALEKNPDAAKAMVEAGWEVASHGYRWIDYQNVDEATEREHIRKTIEVHERLVGKRPVGIYQGKPNVNTRR 174
BLAST of mRNA_H-elongata_contig183793.4947.1 vs. uniprot
Match: A0A4D9D0C2_9STRA (NodB homology domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0C2_9STRA) HSP 1 Score: 129 bits (325), Expect = 3.770e-35 Identity = 61/76 (80.26%), Postives = 65/76 (85.53%), Query Frame = 1
Query: 1 VYACAMALDRNPEAAKAMVDAGWEVASHGYRWIDYQYVDEETEREHIRKAVEITERVCGRRPVGIYQGKPNANTRR 228
VYA A+AL +NPEA KAM+DAGWEVASHGYRWIDYQYV E EREHI+KAV IT VCG RPVGIYQGKPN NTRR
Sbjct: 96 VYAVALALAKNPEAGKAMIDAGWEVASHGYRWIDYQYVGETVEREHIQKAVAITTDVCGTRPVGIYQGKPNVNTRR 171
BLAST of mRNA_H-elongata_contig183793.4947.1 vs. uniprot
Match: A0A7S0NBR4_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0NBR4_9CRYP) HSP 1 Score: 127 bits (318), Expect = 7.340e-35 Identity = 57/76 (75.00%), Postives = 68/76 (89.47%), Query Frame = 1
Query: 1 VYACAMALDRNPEAAKAMVDAGWEVASHGYRWIDYQYVDEETEREHIRKAVEITERVCGRRPVGIYQGKPNANTRR 228
VYACA+AL+RNPEAA+AMV+AGWEVASHGYRW DYQYVDE TE+EHI+ AVE+ ++ G+RP+GIYQGKPN NT R
Sbjct: 29 VYACALALERNPEAAQAMVEAGWEVASHGYRWWDYQYVDEATEKEHIKLAVEVQQKAIGQRPLGIYQGKPNENTLR 104
BLAST of mRNA_H-elongata_contig183793.4947.1 vs. uniprot
Match: K3WUK4_GLOUD (NodB homology domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUK4_GLOUD) HSP 1 Score: 129 bits (323), Expect = 7.810e-35 Identity = 59/76 (77.63%), Postives = 67/76 (88.16%), Query Frame = 1
Query: 1 VYACAMALDRNPEAAKAMVDAGWEVASHGYRWIDYQYVDEETEREHIRKAVEITERVCGRRPVGIYQGKPNANTRR 228
VYA +AL++NP+A KAMV+AGWEVASHGYRWIDYQ VDE TEREHIRK +EI E+V G+RPVGIYQGKPN NTRR
Sbjct: 96 VYAVGLALEKNPDAGKAMVEAGWEVASHGYRWIDYQNVDEATEREHIRKTIEIHEKVIGKRPVGIYQGKPNVNTRR 171
BLAST of mRNA_H-elongata_contig183793.4947.1 vs. uniprot
Match: A0A225X614_9STRA (Urate catabolism protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X614_9STRA) HSP 1 Score: 127 bits (318), Expect = 4.430e-34 Identity = 60/76 (78.95%), Postives = 65/76 (85.53%), Query Frame = 1
Query: 1 VYACAMALDRNPEAAKAMVDAGWEVASHGYRWIDYQYVDEETEREHIRKAVEITERVCGRRPVGIYQGKPNANTRR 228
VYA +AL++NPEAAKAM DAGWEVASHGYRWIDYQ VDE TEREHIRK V I E++ G RPVGIYQGKPN NTRR
Sbjct: 97 VYAVGLALEKNPEAAKAMKDAGWEVASHGYRWIDYQNVDEATEREHIRKTVAIHEKLLGERPVGIYQGKPNVNTRR 172
BLAST of mRNA_H-elongata_contig183793.4947.1 vs. uniprot
Match: L1JND7_GUITC (NodB homology domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JND7_GUITC) HSP 1 Score: 126 bits (317), Expect = 5.990e-34 Identity = 56/74 (75.68%), Postives = 67/74 (90.54%), Query Frame = 1
Query: 1 VYACAMALDRNPEAAKAMVDAGWEVASHGYRWIDYQYVDEETEREHIRKAVEITERVCGRRPVGIYQGKPNANT 222
VYACA+AL+RNPEAA+AMV+AGWEVASHGYRW DYQYVDE TE+EHI+ AVE+ ++ G+RP+GIYQGKPN NT
Sbjct: 110 VYACALALERNPEAAQAMVEAGWEVASHGYRWWDYQYVDEATEKEHIKLAVEVQQKTIGQRPLGIYQGKPNENT 183
BLAST of mRNA_H-elongata_contig183793.4947.1 vs. uniprot
Match: A0A2E6DI04_9DELT (Allantoinase PuuE n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E6DI04_9DELT) HSP 1 Score: 126 bits (316), Expect = 8.080e-34 Identity = 57/75 (76.00%), Postives = 67/75 (89.33%), Query Frame = 1
Query: 4 YACAMALDRNPEAAKAMVDAGWEVASHGYRWIDYQYVDEETEREHIRKAVEITERVCGRRPVGIYQGKPNANTRR 228
+A A+AL++NP+ A AMVDAGWE+ASHGYRWIDYQYVD +TEREHIRKAVEI ER+ G RP+GIYQGKP+ NTRR
Sbjct: 104 FAVALALEKNPDVAAAMVDAGWEIASHGYRWIDYQYVDIDTEREHIRKAVEIQERISGARPLGIYQGKPSPNTRR 178
BLAST of mRNA_H-elongata_contig183793.4947.1 vs. uniprot
Match: A0A7S0Z2V4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z2V4_9CRYP) HSP 1 Score: 119 bits (297), Expect = 2.590e-33 Identity = 55/76 (72.37%), Postives = 63/76 (82.89%), Query Frame = 1
Query: 1 VYACAMALDRNPEAAKAMVDAGWEVASHGYRWIDYQYVDEETEREHIRKAVEITERVCGRRPVGIYQGKPNANTRR 228
VYACA+AL+RNPEA AMV+AGWEVA+HGYRW DYQ VDE TER+HI +AV + +RV G RPVGIYQGKP NT R
Sbjct: 1 VYACALALERNPEAGAAMVEAGWEVATHGYRWWDYQNVDEATERDHIARAVSVQKRVTGTRPVGIYQGKPGPNTLR 76
BLAST of mRNA_H-elongata_contig183793.4947.1 vs. uniprot
Match: A0A3R7H4B2_9STRA (NodB homology domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H4B2_9STRA) HSP 1 Score: 124 bits (311), Expect = 3.550e-33 Identity = 58/76 (76.32%), Postives = 66/76 (86.84%), Query Frame = 1
Query: 1 VYACAMALDRNPEAAKAMVDAGWEVASHGYRWIDYQYVDEETEREHIRKAVEITERVCGRRPVGIYQGKPNANTRR 228
VYA +AL++NPEAA+AM AGWEVASHGYRWIDYQ VDE TEREHIRK VEI E++ G+RPVGIYQGKPN NTR+
Sbjct: 101 VYAVGLALEQNPEAAQAMKKAGWEVASHGYRWIDYQNVDETTEREHIRKTVEIHEKLLGKRPVGIYQGKPNVNTRK 176 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig183793.4947.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig183793.4947.1 >prot_H-elongata_contig183793.4947.1 ID=prot_H-elongata_contig183793.4947.1|Name=mRNA_H-elongata_contig183793.4947.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bp MALDRNPEAAKAMVDAGWEVASHGYRWIDYQYVDEETEREHIRKAVEITEback to top mRNA from alignment at H-elongata_contig183793:424..1110- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig183793.4947.1 ID=mRNA_H-elongata_contig183793.4947.1|Name=mRNA_H-elongata_contig183793.4947.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=687bp|location=Sequence derived from alignment at H-elongata_contig183793:424..1110- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig183793:424..1110- >mRNA_H-elongata_contig183793.4947.1 ID=mRNA_H-elongata_contig183793.4947.1|Name=mRNA_H-elongata_contig183793.4947.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=426bp|location=Sequence derived from alignment at H-elongata_contig183793:424..1110- (Himanthalia elongata Himel1 dioecious)back to top |