mRNA_H-elongata_contig17658.4622.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig17658.4622.1
Unique NamemRNA_H-elongata_contig17658.4622.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig17658.4622.1 vs. uniprot
Match: D7FYM6_ECTSI (Thioredoxin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYM6_ECTSI)

HSP 1 Score: 262 bits (670), Expect = 4.660e-84
Identity = 131/198 (66.16%), Postives = 162/198 (81.82%), Query Frame = 2
Query:    2 MVLSYGVLRCYFISSPRLTTKQTWTGFSQEVEVLGLAAAMVLSKCRKIATFDELLERVLFVGKATVSSLLYFVGAAYMVSYLAIWAALSLLVQRPRFPHPREVSSLTGGEFQSMVRSST-QAPGPPVAWLVMFHADWCSASSNIQPMFGALARRFSGKNRRFALVDVVSYPDVAENLNINTGGTSKQLPTLALFVGGR 592
            +VL+YG++R Y +S+PRLT++ TWTGFSQE E++GLA A ++SK RK+ATFDE L R   +GKA V+ LL+FVG  +MV YL +W A SL+V  PRF  P EVS+L  GEFQSMVRSS+ QAPG  VAWLVMFHADWCS+S N+QPMFGALARR++ KNRRFA+VD+V++P+ AE+LNINT GTSKQLPTLALF  GR
Sbjct:   26 LVLNYGIVRWY-MSAPRLTSQATWTGFSQETEIIGLATATLVSKYRKMATFDEFLARFFVIGKAAVAVLLFFVGIPHMVWYLILWTACSLVVPYPRFVLPSEVSTLNPGEFQSMVRSSSAQAPGERVAWLVMFHADWCSSSHNLQPMFGALARRYADKNRRFAVVDIVAHPETAEDLNINTAGTSKQLPTLALFASGR 222          
BLAST of mRNA_H-elongata_contig17658.4622.1 vs. uniprot
Match: A0A6H5JZG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZG0_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 3.420e-36
Identity = 74/124 (59.68%), Postives = 88/124 (70.97%), Query Frame = 2
Query:   92 VEVLGLAAAMVLSKCRKIATFDELLERVLFVGKATVSSLLYFVGAAYMVSYLAIWAALSLLVQRPRFPHPREVSSLTGGEFQSMVRSST-QAPGPPVAWLVMFHADWCSASSNIQPMFGALARR 460
            +EV+GLA A ++SK RK+ATFDE L R   +GKA V+ LL+FVG  +MV YL +W                EVS+L  GEFQSMVRSS+ QAPG  VAWLVMFHADWCS+S N+QPMFGALARR
Sbjct:    1 MEVIGLATATLVSKYRKMATFDEFLARFFVIGKAAVAVLLFFVGIPHMVWYLILWT---------------EVSTLNPGEFQSMVRSSSAQAPGDRVAWLVMFHADWCSSSRNLQPMFGALARR 109          
BLAST of mRNA_H-elongata_contig17658.4622.1 vs. uniprot
Match: A0A6V1S3B1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S3B1_HETAK)

HSP 1 Score: 112 bits (279), Expect = 1.370e-25
Identity = 69/201 (34.33%), Postives = 108/201 (53.73%), Query Frame = 2
Query:    2 MVLSYGVLRCYFISSPRLTTKQTWTGFSQEVEVLGLAAAMVLSKCRKIATFDELLERVLFVGKATVSSLLYFVGAAYMVSYLAIWAALSLLVQRPRFPHPREVSSLTGGEFQSMVRSSTQAPGPPVAWLVMFHADWCSASSNIQPMFGALARRFSGKNR-----RFALVDVVSYPDVAENLNINTGGTSKQLPTLALFVGG 589
            ++L Y ++R  +     L   +T  GF++EVE++ LA   ++ K  + AT D+ L++V   GK    +LL+++   +   YL I A ++L V  P       + S+  G FQ +V++      P  A LVMFH DWC   +  +P+F  +A RF G        RFA VD+V +P++A+   ++  GTSKQLPT  LF  G
Sbjct:   19 LLLIYPLVRFTYGIPDSLRDTRTMLGFTKEVEMILLAFVALIVKFARAATLDQYLDKVFLFGKMANGALLFYINRPFATGYLVI-AFVTLAVLNPPKILNLSIESMGMGTFQEVVKNCRD---PRRAALVMFHCDWCKDCTLTEPIFSRIADRFRGGGXXXGPYRFAKVDLVRFPELADEYAVDVSGTSKQLPTFILFYKG 215          
BLAST of mRNA_H-elongata_contig17658.4622.1 vs. uniprot
Match: W4H8H0_9STRA (Thioredoxin domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H8H0_9STRA)

HSP 1 Score: 109 bits (273), Expect = 5.820e-25
Identity = 65/200 (32.50%), Postives = 99/200 (49.50%), Query Frame = 2
Query:    2 MVLSYGVLRCYFISSPRLTTKQTWTGFSQEVEVLGLAAAMVLSKCRKIATFDELLERVLFVGKATVSSLLYFVGAAYMVSYLAIWAALSLLVQRPRFPHPREVSSLTGGEFQSMVRSSTQAPGPPVAWLVMFHADWCSASSNIQPMFGALARRFSGKNRRFALVDVVSYPDVAENLNINTGGTS-KQLPTLALFVGGR*T 598
            ++ SYGV R    S+ +L  K+ W G ++E ++L +    +L   RK AT D ++       K ++  L Y +       Y      + L+V  P++  P + ++LTG  F   VR+ +        WLV  HADWC        MF  L+        RF  +DV +YPD+A+ LNI+   T+ KQLP+L LF GG+ T
Sbjct:   19 LISSYGVARITRTSA-KLAEKEEWLGLTREQQILFVLVGSILFNYRKKATVDGVIAMAFLYAKGSIGGLFYLLDPTLFACYAIAAVLIFLVVPYPKYAGPHKSTTLTGAFFNEHVRNGSSG-----TWLVYLHADWCDECLYHDAMFADLSLAHGTDAVRFGRLDVEAYPDIAKELNIDMNATTTKQLPSLVLFEGGKET 212          
BLAST of mRNA_H-elongata_contig17658.4622.1 vs. uniprot
Match: A0A7S2RZA8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZA8_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 6.810e-21
Identity = 58/199 (29.15%), Postives = 99/199 (49.75%), Query Frame = 2
Query:   11 SYGVLRCYF----ISSPRLTTKQTWT-GFSQEVEVLGLAAAMVLSKCRKIATFDELLERVLFVGKATVSSLLYFVGAAYMVSYLAIWAALSLLVQRPRFPHPREVSSLTGGEFQSMVRSSTQAPGPPVAWLVMFHADWCSASSNIQPMFGALARRFSGKNRRFALVDVVSYPDVAENLNINTGGTSKQLPTLALFVGGR 592
            +Y  LR Y+    +S   +    +W    ++E E+    A ++  K RK +T +++ E+V    K T   LL+F     MV Y        +L++ P+F    E   L    F + VR+  +       WLV+FHADWC   + ++P+   L+ R S + R++  +D+V +P++ +  NI+    +KQLPT+  F  GR
Sbjct:   34 AYLPLRMYWLDSEVSQAFMQEPGSWVESLTREQEIACFGAFVLFLKTRKTSTLEQVCEKVFLFSKLTTLVLLFFASKTTMVGYFLAVTVAFVLLRPPKFFGDEEFEYLHASSFDAQVRNP-KGDMRKTTWLVVFHADWCEKCTTLEPLLAKLSLRHSDEGRKWGKIDLVHFPELGKEFNIDMTPYTKQLPTVIEFFKGR 231          
BLAST of mRNA_H-elongata_contig17658.4622.1 vs. uniprot
Match: A0A673A5L4_9TELE (Thioredoxin related transmembrane protein 2 n=3 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673A5L4_9TELE)

HSP 1 Score: 82.8 bits (203), Expect = 1.310e-14
Identity = 45/169 (26.63%), Postives = 87/169 (51.48%), Query Frame = 2
Query:   86 QEVEVLGLAAAMVLSKCRKIATFDELLERVLFVGKATVSSLLYFVGAAYMVSYLAIWAALSLLVQRPRFPHPREVSSLTGGEFQSMVRSSTQAPGPPVAWLVMFHADWCSASSNIQPMFGALARRFSGKNRRFALVDVVSYPDVAENLNINTGGTSKQLPTLALFVGGR 592
            +E+E+L   +A+V+ K R+  T D+ +  +    K     L + +     + YLA+  A  +  + P +  P  ++  +       ++  ++     + W+V F+A+W S   +  P+F  L+ +++    RFA VD+  Y D+++   ++T   +KQLPTLAL+ GGR
Sbjct:   64 RELEILMFLSAIVMMKNRRAITLDQHIGNLFLFSKVANVILFFRLDVRLGILYLALCVAFVMTCKPPIYMGPEYITYFSDKTIDEELQRDSR-----ITWIVEFYANWSSDCQSFAPVFADLSLKYNCAGLRFAKVDIGRYGDISQRYGVSTSPLAKQLPTLALYQGGR 227          
BLAST of mRNA_H-elongata_contig17658.4622.1 vs. uniprot
Match: A0A4U5UE82_COLLU (Thioredoxin-related transmembrane protein 2-B n=7 Tax=Eupercaria TaxID=1489922 RepID=A0A4U5UE82_COLLU)

HSP 1 Score: 73.9 bits (180), Expect = 1.710e-11
Identity = 44/169 (26.04%), Postives = 85/169 (50.30%), Query Frame = 2
Query:   86 QEVEVLGLAAAMVLSKCRKIATFDELLERVLFVGKATVSSLLYFVGAAYMVSYLAIWAALSLLVQRPRFPHPREVSSLTGGEFQSMVRSSTQAPGPPVAWLVMFHADWCSASSNIQPMFGALARRFSGKNRRFALVDVVSYPDVAENLNINTGGTSKQLPTLALFVGGR 592
            +EVE+L   +A+V+ K R+  T ++ +  +    K     L + +     + YL++  A  +  + P +  P  +   +       ++  ++     V W+V F+A+W S   +  P+F  L+ +++    RF  VD+  Y +V++   ++T   +KQLPT+ALF GGR
Sbjct:   64 REVEILMFLSAIVMMKNRRAITLEQHIGNLFLFSKVANVILFFRLDIRLGILYLSLCVAFVMTCKPPLYMGPEYIKYFSDKTIDEELQRDSR-----VTWIVEFYANWSSDCQSFAPVFADLSLKYNCAGLRFGKVDIGRYGEVSQT--VSTSPLAKQLPTVALFQGGR 225          
BLAST of mRNA_H-elongata_contig17658.4622.1 vs. uniprot
Match: UPI00103FA335 (thioredoxin-related transmembrane protein 2 homolog n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103FA335)

HSP 1 Score: 71.2 bits (173), Expect = 9.930e-11
Identity = 52/171 (30.41%), Postives = 75/171 (43.86%), Query Frame = 2
Query:   83 SQEVEVLGLAAAMVLSKCRKIA--TFDELLERVLFVGKATVSSLLYFVGAAYMVSYLAIWAALSLLVQRPRFPHPREVSSLTGGEFQSMVRSSTQAPGPPVAWLVMFHADWCSASSNIQPMFGALARRFSGKNRRFALVDVVSYPDVAENLNINTGGTSKQLPTLALFVGG 589
            S+E E+L     +V+ + RK    T    L       K     L  +    Y + Y A+    SLL+  P +  P  +    G   QS+     +  G    W+V  +A W  A  N  P+F  L+  +S  N +F  VD+  YPD A    +  G TS+QLPT+ LFV G
Sbjct:   48 SRETEILFFLIIVVMLRTRKAGSVTMVNYLSSSFVYTKIANLILWLYADIRYGLPYGALIILTSLLLPEPTYMGPEHIIYFRG--TQSLDEELKRNKG--TTWVVCLYAAWHPACVNFAPVFAELSASYSLDNFKFGKVDIGRYPDAAAKYRVQDGPTSRQLPTVLLFVDG 214          
BLAST of mRNA_H-elongata_contig17658.4622.1 vs. uniprot
Match: A0A7R9WE99_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WE99_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.450e-10
Identity = 47/132 (35.61%), Postives = 66/132 (50.00%), Query Frame = 2
Query:  227 AYMVSYLAIWAALSLLVQRPR---FPHPREVSSLTGGEFQSMVRSST--QAPGPPVAW-----LVMFHADWCSASSNIQPMFGALARRFSGKNRRFALVDVVSYPDVAENLNINTGGTSKQLPTLALFVGGR 592
            A   + LA +AA+SLLV  PR   +     V+ L    F + VR +T    PG   A      +V+FH  W        P+   L++    + RRF  VD+  YP+V   L I+T  +SKQLPT+ LF GG+
Sbjct:   22 AAFAALLAAYAAISLLVPPPRCYGYVEGGRVTPLNPRSFAAEVRKATTDSQPGRKTASCLTDDVVLFHVPWSDDCRYFYPILADLSKEHLKEERRFWSVDLNVYPEVGAELRIDTSTSSKQLPTVVLFHGGK 153          
BLAST of mRNA_H-elongata_contig17658.4622.1 vs. uniprot
Match: UPI001864A035 (thioredoxin-related transmembrane protein 2-B-like n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI001864A035)

HSP 1 Score: 67.8 bits (164), Expect = 2.320e-9
Identity = 40/169 (23.67%), Postives = 79/169 (46.75%), Query Frame = 2
Query:   86 QEVEVLGLAAAMVLSKCRKIATFDELLERVLFVGKATVSSLLYFVGAAYMVSYLAIWAALSLLVQRPRFPHPREVSSLTGGEFQSMVRSSTQAPGPPVAWLVMFHADWCSASSNIQPMFGALARRFSGKNRRFALVDVVSYPDVAENLNINTGGTSKQLPTLALFVGGR 592
            +EVE+L   +A+V+ K R+  T ++ +  +    K   + L + +     + YL +     +  + P +  P  +   +    +  +   ++     V W+V F A+W     +   ++  L+ +++    +F  VDV  Y +V     ++T   +KQLPTLALF GG+
Sbjct:   64 REVEILMFLSAIVMMKNRRAITVEQHVGNIFLFSKVANAILFFRLDIRMGLLYLTMCIVFLMTCKPPLYMGPEYIKYFSDKTIEEELERDSR-----VTWIVEFFANWSPECQSFASVYADLSLKYNCAGLKFGKVDVGRYGEVTNKYKVSTSPLTKQLPTLALFQGGK 227          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17658.4622.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D7FYM6_ECTSI4.660e-8466.16Thioredoxin-like protein n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JZG0_9PHAE3.420e-3659.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6V1S3B1_HETAK1.370e-2534.33Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W4H8H0_9STRA5.820e-2532.50Thioredoxin domain-containing protein n=5 Tax=Apha... [more]
A0A7S2RZA8_9STRA6.810e-2129.15Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A673A5L4_9TELE1.310e-1426.63Thioredoxin related transmembrane protein 2 n=3 Ta... [more]
A0A4U5UE82_COLLU1.710e-1126.04Thioredoxin-related transmembrane protein 2-B n=7 ... [more]
UPI00103FA3359.930e-1130.41thioredoxin-related transmembrane protein 2 homolo... [more]
A0A7R9WE99_9STRA1.450e-1035.61Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
UPI001864A0352.320e-923.67thioredoxin-related transmembrane protein 2-B-like... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17658contigH-elongata_contig17658:1639..4072 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score261.9
Seed ortholog evalue2.4e-67
Seed eggNOG ortholog2880.D7FYM6
Preferred nameTMX2
KEGG koko:K20030
EggNOG free text desc.thioredoxin-related transmembrane protein
EggNOG OGsKOG0914@1,KOG0914@2759
EC2.3.1.225
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko04131
Hectar predicted targeting categorysignal anchor
Ec32 ortholog descriptionThioredoxin-like protein
Ec32 orthologEc-26_002790.1
Exons4
Model size877
Cds size594
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17658.4622.1prot_H-elongata_contig17658.4622.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig17658 1921..4071 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930021.9739347-UTR-H-elongata_contig17658:1638..19201622930021.9739347-UTR-H-elongata_contig17658:1638..1920Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17658 1639..1920 -
1691679249.67739-UTR-H-elongata_contig17658:1638..19201691679249.67739-UTR-H-elongata_contig17658:1638..1920Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17658 1639..1920 -
1622930022.0671332-UTR-H-elongata_contig17658:4071..40721622930022.0671332-UTR-H-elongata_contig17658:4071..4072Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17658 4072..4072 -
1691679249.7408214-UTR-H-elongata_contig17658:4071..40721691679249.7408214-UTR-H-elongata_contig17658:4071..4072Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17658 4072..4072 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930021.9989648-CDS-H-elongata_contig17658:1920..20561622930021.9989648-CDS-H-elongata_contig17658:1920..2056Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17658 1921..2056 -
1691679249.6990669-CDS-H-elongata_contig17658:1920..20561691679249.6990669-CDS-H-elongata_contig17658:1920..2056Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17658 1921..2056 -
1622930022.0160036-CDS-H-elongata_contig17658:2377..25761622930022.0160036-CDS-H-elongata_contig17658:2377..2576Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17658 2378..2576 -
1691679249.7142758-CDS-H-elongata_contig17658:2377..25761691679249.7142758-CDS-H-elongata_contig17658:2377..2576Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17658 2378..2576 -
1622930022.0327086-CDS-H-elongata_contig17658:2923..30951622930022.0327086-CDS-H-elongata_contig17658:2923..3095Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17658 2924..3095 -
1691679249.7247624-CDS-H-elongata_contig17658:2923..30951691679249.7247624-CDS-H-elongata_contig17658:2923..3095Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17658 2924..3095 -
1622930022.0499816-CDS-H-elongata_contig17658:3984..40711622930022.0499816-CDS-H-elongata_contig17658:3984..4071Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17658 3985..4071 -
1691679249.7334304-CDS-H-elongata_contig17658:3984..40711691679249.7334304-CDS-H-elongata_contig17658:3984..4071Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17658 3985..4071 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig17658.4622.1

>prot_H-elongata_contig17658.4622.1 ID=prot_H-elongata_contig17658.4622.1|Name=mRNA_H-elongata_contig17658.4622.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=198bp
MVLSYGVLRCYFISSPRLTTKQTWTGFSQEVEVLGLAAAMVLSKCRKIAT
FDELLERVLFVGKATVSSLLYFVGAAYMVSYLAIWAALSLLVQRPRFPHP
REVSSLTGGEFQSMVRSSTQAPGPPVAWLVMFHADWCSASSNIQPMFGAL
ARRFSGKNRRFALVDVVSYPDVAENLNINTGGTSKQLPTLALFVGGR*
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mRNA from alignment at H-elongata_contig17658:1639..4072-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig17658.4622.1 ID=mRNA_H-elongata_contig17658.4622.1|Name=mRNA_H-elongata_contig17658.4622.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2434bp|location=Sequence derived from alignment at H-elongata_contig17658:1639..4072- (Himanthalia elongata Himel1 dioecious)
GATGGTCCTCAGTTACGGAGTGCTGCGGTGTTATTTTATCTCGTCTCCTA GGCTGACGACGAAACAGACATGGACGGGGTTTTCCCAGGTGAGGAAGTTT TGAACTTGAAGCTCGCGCCGAATACATTTTTACTTGGTGCAGTAACTTGC GAATATTCGTATTAACGCACCCTTCGAGGTTGCAGCACTCTGGTGGACAA AGTTTTCGACGAAGAACGTTAGGGCCCAAATTAGGGCTATGCGAATCGAT GGGGCACACTACTATATGTCATGACCATACAAATAGGCAAACAAAAACTG ATCCATGGGGTTACCTGAATAGACTGCACCCGTTACTCAAGCTACCTTGA GGACTGCTGACTCAGTGCCAGTGGACTCTCGGTAATGAACGCCATCGGTA CAGTATGCAATTGCGTGACCTGATAAAATAAGGATTGGCTTGATGGCGGT TGACGGTAAAGATGGTCGCCGTCACGGAAAGCGGGAGAATCAAGATGATC CCGGGGGTACGAACCAAATTCAGACTAGATTGAAAAAAGGAGCAGGCTGA CGCGGGATGGGACGGCCGAACTCGTTTCGCGAGACTTGGAAATCCCTGTT CAGCAGACCACAACTAGGTGGCAACCAAATCCGGTTGATCCATACTCTGC TATATGTGATGACGTCATGACCACACACAATTGTGACAAGTAGTCTTTGC TTTTCCATCAGTCTTTTGTTGTGCCCGACAGCTTTACCTCATTCCAGCTA AATGTCGGACCTGCAGCAATATAGATGTTTCATATATTTCGTGTTGTCCT TTGTGTATGTAAGCCGAACCTCATGTGCCGCACACAACATACTTTTGAGG AAAATCCCTTTGGTTTATGGCCCAAGGTCCCATGTTTCTCTAGGTCGACG CCTCCCGTGAAATAAACTAATTTAATTAGGTAGTGACTCTGAAGCTTCTC TTGTGGCCGCGACGCATCTGTGTTCAGGAAGTGGAAGTTTTAGGGCTCGC GGCAGCTATGGTCCTCTCCAAATGTCGCAAAATTGCGACATTCGATGAGT TGCTTGAACGAGTACTTTTCGTCGGAAAAGCTACCGTGTCGTCGCTGCTA TATTTTGTCGGTGCTGCTTACATGGTGTCGTATCTCGCCATATGGGCAGG TGGGTGGCTTGGCACTTTCATTTGCCACTTTCATATGTCGTTGATGTAAC TCTTTTTAGGATTAGGTAAGGTAGATCCATCATATGATCCCGGTATCGGT GCCGTTGATATTGTTTAGTAATGTCCACAATGTCTTTAGTAGTCTAGTAT ACTGACGAAGCTGCATTGAAAGCATCATTCCACAACGTATCGTTCTCATG TCACTCAAGCCAATTCGGATTCAGGAAGGTTTATTTTGCAGAGATAAACA TCGTTTTATATTACTATGACTTCTGATCATGAAACTAACGAATCCCAACC AATCAAATTTCGTGCTTCCGATTATTCCCCAAAAAATACTTTCCAGCACT CTCGCTACTGGTCCAGCGACCCCGTTTTCCTCACCCCCGTGAGGTGTCAA GTCTTACGGGTGGCGAGTTCCAGTCTATGGTCAGATCGTCTACTCAAGCA CCCGGTCCCCCAGTAGCATGGTTGGTTATGTTCCACGCAGACTGGTGCAG TGCCAGCAGTAACATTCAACCCATGTTCGGGGCACTGGCGAGGAGGTTGG TGCTTCGATTGGCCGTTGTTAAAACCTATCTATATATTATGGCTAATCGT TCAGGGTGTCAATATCTCTAGGAAAGTTGAGTACTAAAGCTTGTAGGTCT TTGGCTGATGGACTGATGGAATACGTACTTTCCATGAGGGTTGCAGAATC ATGCGGGATACCGAGTATACCACAAAAAGTGAACAAACTGAAGTTCTAAC CCTTTATGCCCGAAGCCTAAGGACGAAATGTTGTTCTTGTCCAAGGTTGT GTAATTTTTCGGTACGATAAACACAAATATTCTATCATTGCTTGCACTGC TTTGTTCTGGTGGCAGGTTTTCCGGCAAAAACCGCCGATTTGCCCTCGTG GATGTGGTTAGTTACCCGGATGTTGCGGAAAATCTTAACATCAACACCGG TGGAACAAGCAAACAATTGCCGACTTTAGCGCTCTTCGTCGGTGGAAGGT GAACTATTAATATCTATTATAGCTATCCGAGATGAAAATACTGTCTCTTG GCAGAGTGTTCTACATTTCGACAGGTAAAAGACTAGGACTTCAGAGTAAA ATCCGCCACAGCGTTTTCAAACCGCCAATTGCGCCCATAGCGTGCGGAGT ATCTCTCGATATGGCTCAGTAATACATTAATCATATATTCATATGAGTTG AGGCTCTTGCCGTTTGTGGGTGTTGTAGCCATCTCTGCTTCATGTTTGTT CTCTAGATTTTATGTCTTGCGTAATGTACTGGAC
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Coding sequence (CDS) from alignment at H-elongata_contig17658:1639..4072-

>mRNA_H-elongata_contig17658.4622.1 ID=mRNA_H-elongata_contig17658.4622.1|Name=mRNA_H-elongata_contig17658.4622.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1188bp|location=Sequence derived from alignment at H-elongata_contig17658:1639..4072- (Himanthalia elongata Himel1 dioecious)
ATGGTCCTCAGTTACGGAGTGCTGCGGTGTTATTTTATCTCGTCTCCTAG
GCTGACGACGAAACAGACATGGACGGGGTTTTCCCAGATGGTCCTCAGTT
ACGGAGTGCTGCGGTGTTATTTTATCTCGTCTCCTAGGCTGACGACGAAA
CAGACATGGACGGGGTTTTCCCAGGAAGTGGAAGTTTTAGGGCTCGCGGC
AGCTATGGTCCTCTCCAAATGTCGCAAAATTGCGACATTCGATGAGTTGC
TTGAACGAGTACTTTTCGTCGGAAAAGCTACCGTGTCGTCGCTGCTATAT
TTTGTCGGTGCTGCTTACATGGTGTCGTATCTCGCCATATGGGCAGGAAG
TGGAAGTTTTAGGGCTCGCGGCAGCTATGGTCCTCTCCAAATGTCGCAAA
ATTGCGACATTCGATGAGTTGCTTGAACGAGTACTTTTCGTCGGAAAAGC
TACCGTGTCGTCGCTGCTATATTTTGTCGGTGCTGCTTACATGGTGTCGT
ATCTCGCCATATGGGCAGCACTCTCGCTACTGGTCCAGCGACCCCGTTTT
CCTCACCCCCGTGAGGTGTCAAGTCTTACGGGTGGCGAGTTCCAGTCTAT
GGTCAGATCGTCTACTCAAGCACCCGGTCCCCCAGTAGCATGGTTGGTTA
TGTTCCACGCAGACTGGTGCAGTGCCAGCAGTAACATTCAACCCATGTTC
GGGGCACTGGCGAGGAGCACTCTCGCTACTGGTCCAGCGACCCCGTTTTC
CTCACCCCCGTGAGGTGTCAAGTCTTACGGGTGGCGAGTTCCAGTCTATG
GTCAGATCGTCTACTCAAGCACCCGGTCCCCCAGTAGCATGGTTGGTTAT
GTTCCACGCAGACTGGTGCAGTGCCAGCAGTAACATTCAACCCATGTTCG
GGGCACTGGCGAGGAGGTTTTCCGGCAAAAACCGCCGATTTGCCCTCGTG
GATGTGGTTAGTTACCCGGATGTTGCGGAAAATCTTAACATCAACACCGG
TGGAACAAGCAAACAATTGCCGACTTTAGCGCTCTTCGTCGGTGGAAGGT
GAGTTTTCCGGCAAAAACCGCCGATTTGCCCTCGTGGATGTGGTTAGTTA
CCCGGATGTTGCGGAAAATCTTAACATCAACACCGGTGGAACAAGCAAAC
AATTGCCGACTTTAGCGCTCTTCGTCGGTGGAAGGTGA
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