mRNA_H-elongata_contig17642.4615.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig17642.4615.1
Unique NamemRNA_H-elongata_contig17642.4615.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig17642.4615.1 vs. uniprot
Match: D8LF99_ECTSI (Protein for assembly of pre-ribosomal particles containing 18S rRNA n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF99_ECTSI)

HSP 1 Score: 236 bits (603), Expect = 1.830e-64
Identity = 151/187 (80.75%), Postives = 166/187 (88.77%), Query Frame = 2 
Query: 1235 GVQMDGQELGGRWLNIIMSFERPGANARTGGSKPKPEGCTTVFIGNLSWSIDEETIRQTFGECGDIKTVRFAEDRETGEFRGFGHVEYYDGSCVDAAVELAGSNVMGRPIRVDYAAPRAPREGSFGGGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSPRPKQGIQSFKGTKKSFD 1795
             +++DGQELGGRWL I+MSFE+P  +AR G  K KP GCTTVFIGNLSWSIDE+TIRQTFGECGDIK+VRFAEDRETGEFRGFGHVE+YDG  VDAA++LA S+VMGRPIRVDYAAPRAPR+ SFGGGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      F+ R KQGIQSF+GTKKSFD
Sbjct:  338 AIELDGQELGGRWLKIMMSFEKPD-HARNGEPKVKPAGCTTVFIGNLSWSIDEDTIRQTFGECGDIKSVRFAEDRETGEFRGFGHVEFYDGEHVDAAMKLANSDVMGRPIRVDYAAPRAPRDDSFGGGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------FNARAKQGIQSFQGTKKSFD 517
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BLAST of mRNA_H-elongata_contig17642.4615.1 vs. uniprot
Match: A0A835ZAT4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAT4_9STRA)

HSP 1 Score: 166 bits (420), Expect = 8.500e-42
Identity = 78/121 (64.46%), Postives = 95/121 (78.51%), Query Frame = 2 
Query: 1268 RWLNIIMSFER---PGANARTGGSKPKPEGCTTVFIGNLSWSIDEETIRQTFGECGDIKTVRFAEDRETGEFRGFGHVEYYDGSCVDAAVELAGSNVMGRPIRVDYAAPRAPREGSFGGGG 1621
            RWL I+++ ER   P   A     K KPEGCTTVFIGNLSW +DE+ +R  FGECG+I +VRFA DRETG+F+GFGHVE+ DG  VDAA+++AG+ + GRP+RVDYAAPRAPRE SFGGGG
Sbjct:  159 RWLKIVLATERAARPSFGAPD--KKDKPEGCTTVFIGNLSWDVDEDAVRAAFGECGEIASVRFATDRETGDFKGFGHVEFVDGEGVDAAIDMAGTEIAGRPVRVDYAAPRAPRE-SFGGGG 276
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BLAST of mRNA_H-elongata_contig17642.4615.1 vs. uniprot
Match: A0A7S2V571_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V571_9STRA)

HSP 1 Score: 161 bits (407), Expect = 1.640e-38
Identity = 75/131 (57.25%), Postives = 98/131 (74.81%), Query Frame = 2 
Query: 1235 GVQMDGQELGGRWLNIIMSFERPGANARTGGSKP--KPEGCTTVFIGNLSWSIDEETIRQTFGECGDIKTVRFAEDRETGEFRGFGHVEYYDGSCVDAAVELAGSNVMGRPIRVDYAAPRAPREGSFGGGG 1621
             +++DG  +G RW+ +I++ + P         KP  KPEGC TVFIGNLSW IDE+T+RQTFG+CGDIK+VRFAEDRETG FRGFG+V++YDG   D A++L GS++MGR +R+DY+APR      FGGGG
Sbjct:  367 ALELDGGTVGERWVKLILARDIPPP------PKPGEKPEGCDTVFIGNLSWDIDEDTVRQTFGDCGDIKSVRFAEDRETGRFRGFGYVQFYDGDATDEAMKLNGSDLMGREVRIDYSAPRG-----FGGGG 486
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BLAST of mRNA_H-elongata_contig17642.4615.1 vs. uniprot
Match: A0A7S1DDH5_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DDH5_CYCTE)

HSP 1 Score: 147 bits (371), Expect = 6.620e-37
Identity = 66/127 (51.97%), Postives = 92/127 (72.44%), Query Frame = 2 
Query: 1235 GVQMDGQELGGRWLNIIMSFERPGANARTGGSKPKPEGCTTVFIGNLSWSIDEETIRQTFGECGDIKTVRFAEDRETGEFRGFGHVEYYDGSCVDAAVELAGSNVMGRPIRVDYAAPRAPREGSFGG 1615
             V+++G++  GRWLNI  S  +P    R      K +GC TVF+GNLSW+IDE+T+++ FGECG+IK VRFA D+ET +F+G+GH+E+Y+    D A+ELAG+++MGRP+RVDYA  R     SFGG
Sbjct:   53 AVELNGEDFQGRWLNIKYSTPKPIMAPRE--PTQKQDGCVTVFVGNLSWNIDEDTLKEVFGECGEIKMVRFATDKETEDFKGYGHIEFYETEATDKAMELAGTDIMGRPVRVDYANDRRK---SFGG 174
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BLAST of mRNA_H-elongata_contig17642.4615.1 vs. uniprot
Match: W7TQX9_9STRA (RNA binding protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQX9_9STRA)

HSP 1 Score: 152 bits (383), Expect = 4.250e-35
Identity = 78/138 (56.52%), Postives = 98/138 (71.01%), Query Frame = 2 
Query: 1235 GVQMDGQELG--GRWLNIIMSFERPGANARTGG-----SKP---KPEGCTTVFIGNLSWSIDEETIRQTFGECGDIKTVRFAEDRETGEFRGFGHVEYYDGSCVDAAVELAGSNVMGRPIRVDYAAPRAPREGSFGGG 1618
             V M+ +  G  GRW+ +   +E P A  + GG     ++P   KPEGC +VFIGNLSW+IDEETIR  F  CG++ +VRFA DRETGEFRGFGHV++ D +  +AAV++AG+ VMGR IRVDYA PR PREG FGGG
Sbjct:  330 AVAMNEEIFGDSGRWVRV-RKYE-PTAAGKDGGKGMGFARPPSEKPEGCMSVFIGNLSWNIDEETIRSAFASCGEVTSVRFATDRETGEFRGFGHVDFADETAPEAAVQMAGTPVMGREIRVDYAQPRPPREGGFGGG 465
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BLAST of mRNA_H-elongata_contig17642.4615.1 vs. uniprot
Match: A0A7S3UY59_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UY59_HETAK)

HSP 1 Score: 150 bits (380), Expect = 9.460e-35
Identity = 74/130 (56.92%), Postives = 92/130 (70.77%), Query Frame = 2 
Query: 1241 QMDGQELGGRWLNIIMSFERPGANARTGGSKP--KPEGCTTVFIGNLSWSIDEETIRQTFGECGDIKTVRFAEDRETGEFRGFGHVEYYDGSCVDAAVELAGSNVMGRPIRVDYAAPRAPREGSFGGGGR 1624
            ++DG   G RWL I  + ERP A      +KP  +PEGC TVF GNLSW IDEE++R+ F +CGDI +VRFAEDRETG+FRGFG+V +YDG+C D A++L G  V GR IR+DY+APR       GGGGR
Sbjct:  389 ELDGATFGERWLKIEEARERPAA------AKPGERPEGCDTVFCGNLSWDIDEESLREFFKDCGDISSVRFAEDRETGKFRGFGYVSFYDGACTDEAMKLTGQVVAGREIRLDYSAPRDRS----GGGGR 508
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BLAST of mRNA_H-elongata_contig17642.4615.1 vs. uniprot
Match: A0A7S0GF91_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GF91_9STRA)

HSP 1 Score: 138 bits (347), Expect = 1.630e-34
Identity = 66/95 (69.47%), Postives = 76/95 (80.00%), Query Frame = 2 
Query: 1337 KPEGCTTVFIGNLSWSIDEETIRQTFGECGDIKTVRFAEDRETGEFRGFGHVEYYDGSCVDAAVELAGSNVMGRPIRVDYAAPRAPREGSFGGGG 1621
            K EGCTTVF+GNLSW IDEET+RQTFGECG I +VRFA DRETGEFRG+GHVE+ +    D AV +AG +VMGR IRVD+AA R   + SFGGGG
Sbjct:    3 KQEGCTTVFVGNLSWDIDEETLRQTFGECGTICSVRFATDRETGEFRGYGHVEFEETEATDKAVGMAGQDVMGRAIRVDFAAVR---QNSFGGGG 94
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BLAST of mRNA_H-elongata_contig17642.4615.1 vs. uniprot
Match: A0A7S2RIH6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RIH6_9STRA)

HSP 1 Score: 145 bits (367), Expect = 4.280e-34
Identity = 64/118 (54.24%), Postives = 87/118 (73.73%), Query Frame = 2 
Query: 1235 GVQMDGQELGGRWLNIIMSFERPGANARTGGSKPKPEGCTTVFIGNLSWSIDEETIRQTFGECGDIKTVRFAEDRETGEFRGFGHVEYYDGSCVDAAVELAGSNVMGRPIRVDYAAPR 1588
             V+M+G + GGRWL+I ++ ++P    R      KPEGC T+FIGNLSW IDE+++R+ F ECG+I TVRFAED+ETG+FRGFGHVE+ +      AV +AG+++MGR +RVDYA  R
Sbjct:  260 AVEMNGGDFGGRWLDIKLADDKPIQTERA--PSEKPEGCLTIFIGNLSWQIDEDSVREAFQECGEITTVRFAEDKETGDFRGFGHVEFANTDSTTQAVAMAGTDIMGRAVRVDYAQDR 375
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BLAST of mRNA_H-elongata_contig17642.4615.1 vs. uniprot
Match: A0A7S3Q248_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q248_9STRA)

HSP 1 Score: 147 bits (370), Expect = 4.620e-34
Identity = 60/117 (51.28%), Postives = 89/117 (76.07%), Query Frame = 2 
Query: 1238 VQMDGQELGGRWLNIIMSFERPGANARTGGSKPKPEGCTTVFIGNLSWSIDEETIRQTFGECGDIKTVRFAEDRETGEFRGFGHVEYYDGSCVDAAVELAGSNVMGRPIRVDYAAPR 1588
            + ++G++ GGRWL+I  + ++P   AR   +  KP  C TVF GNLSW++DE+T+R+TF ECG+I ++RFA DRETGEF+GFGH+E++     DAA+ +AG+++MGR +RVDYAA +
Sbjct:  263 MALNGEDFGGRWLSIKYASDKPAFAARE--TSEKPPDCKTVFCGNLSWNVDEDTLRETFAECGEISSIRFATDRETGEFKGFGHIEFFSSDSTDAAIAMAGTDIMGRAVRVDYAADK 377
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BLAST of mRNA_H-elongata_contig17642.4615.1 vs. uniprot
Match: H3GM16_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GM16_PHYRM)

HSP 1 Score: 143 bits (361), Expect = 1.190e-32
Identity = 70/128 (54.69%), Postives = 86/128 (67.19%), Query Frame = 2 
Query: 1235 GVQMDGQELGGRWLNIIMSFERPGANARTGGSKPKPEGCTTVFIGNLSWSIDEETIRQTFGECGDIKTVRFAEDRETGEFRGFGHVEYYDGSCVDAAVELAGSNVMGRPIRVDYAAPRAPREGSFGGG 1618
             + MDGQ+ GGRW+ I  + ++   +        KPEGCT+VFIGNLSW +DE TIR+TFGECG+I + R A DRETGEFRGFGHV++     VD AV+LAGS V GR IRV+YA  R    G   GG
Sbjct:  278 ALAMDGQDFGGRWMKIRTAEKKNMFDE-------KPEGCTSVFIGNLSWDVDENTIRETFGECGEILSCRLATDRETGEFRGFGHVDFETTEAVDEAVKLAGSYVSGRAIRVNYAKSREQHSGGGRGG 398
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17642.4615.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF99_ECTSI1.830e-6480.75Protein for assembly of pre-ribosomal particles co... [more]
A0A835ZAT4_9STRA8.500e-4264.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V571_9STRA1.640e-3857.25Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S1DDH5_CYCTE6.620e-3751.97Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
W7TQX9_9STRA4.250e-3556.52RNA binding protein n=2 Tax=Monodopsidaceae TaxID=... [more]
A0A7S3UY59_HETAK9.460e-3556.92Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S0GF91_9STRA1.630e-3469.47Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A7S2RIH6_9STRA4.280e-3454.24Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S3Q248_9STRA4.620e-3451.28Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
H3GM16_PHYRM1.190e-3254.69Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17642contigH-elongata_contig17642:1622..6090 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score232.6
Seed ortholog evalue1.4e-58
Seed eggNOG ortholog2880.D8LF99
KEGG koko:K11294,ko:K12741,ko:K12885
KEGG Pathwayko03040,ko05130,map03040,map05130
EggNOG free text desc.RNA binding
EggNOG OGsKOG0118@1,KOG0118@2759
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009,ko03019,ko03036,ko03041
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein for assembly of pre-ribosomal particles containing 18S rRNA
Ec32 orthologEc-01_004160.1
Exons8
Model size2598
Cds size555
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930021.3057413-UTR-H-elongata_contig17642:1621..21991622930021.3057413-UTR-H-elongata_contig17642:1621..2199Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17642 1622..2199 +
1691679249.3816752-UTR-H-elongata_contig17642:1621..21991691679249.3816752-UTR-H-elongata_contig17642:1621..2199Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17642 1622..2199 +
1622930021.320553-UTR-H-elongata_contig17642:2900..30051622930021.320553-UTR-H-elongata_contig17642:2900..3005Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17642 2901..3005 +
1691679249.3916357-UTR-H-elongata_contig17642:2900..30051691679249.3916357-UTR-H-elongata_contig17642:2900..3005Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17642 2901..3005 +
1622930021.3375428-UTR-H-elongata_contig17642:3235..33311622930021.3375428-UTR-H-elongata_contig17642:3235..3331Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17642 3236..3331 +
1691679249.4061553-UTR-H-elongata_contig17642:3235..33311691679249.4061553-UTR-H-elongata_contig17642:3235..3331Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17642 3236..3331 +
1622930021.3567996-UTR-H-elongata_contig17642:3558..36571622930021.3567996-UTR-H-elongata_contig17642:3558..3657Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17642 3559..3657 +
1691679249.4164736-UTR-H-elongata_contig17642:3558..36571691679249.4164736-UTR-H-elongata_contig17642:3558..3657Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17642 3559..3657 +
1622930021.4184885-UTR-H-elongata_contig17642:4907..57691622930021.4184885-UTR-H-elongata_contig17642:4907..5769Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17642 4908..5769 +
1691679249.4631352-UTR-H-elongata_contig17642:4907..57691691679249.4631352-UTR-H-elongata_contig17642:4907..5769Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17642 4908..5769 +
1622930021.434247-UTR-H-elongata_contig17642:5787..60901622930021.434247-UTR-H-elongata_contig17642:5787..6090Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17642 5788..6090 +
1691679249.4789662-UTR-H-elongata_contig17642:5787..60901691679249.4789662-UTR-H-elongata_contig17642:5787..6090Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17642 5788..6090 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930021.3729227-CDS-H-elongata_contig17642:4022..41721622930021.3729227-CDS-H-elongata_contig17642:4022..4172Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17642 4023..4172 +
1691679249.4245005-CDS-H-elongata_contig17642:4022..41721691679249.4245005-CDS-H-elongata_contig17642:4022..4172Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17642 4023..4172 +
1622930021.3885584-CDS-H-elongata_contig17642:4322..44961622930021.3885584-CDS-H-elongata_contig17642:4322..4496Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17642 4323..4496 +
1691679249.4329407-CDS-H-elongata_contig17642:4322..44961691679249.4329407-CDS-H-elongata_contig17642:4322..4496Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17642 4323..4496 +
1622930021.4039187-CDS-H-elongata_contig17642:4676..49071622930021.4039187-CDS-H-elongata_contig17642:4676..4907Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17642 4677..4907 +
1691679249.4492214-CDS-H-elongata_contig17642:4676..49071691679249.4492214-CDS-H-elongata_contig17642:4676..4907Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17642 4677..4907 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17642.4615.1prot_H-elongata_contig17642.4615.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig17642 4023..4907 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig17642.4615.1

>prot_H-elongata_contig17642.4615.1 ID=prot_H-elongata_contig17642.4615.1|Name=mRNA_H-elongata_contig17642.4615.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=185bp
MDGQELGGRWLNIIMSFERPGANARTGGSKPKPEGCTTVFIGNLSWSIDE
ETIRQTFGECGDIKTVRFAEDRETGEFRGFGHVEYYDGSCVDAAVELAGS
NVMGRPIRVDYAAPRAPREGSFGGGGRGGGGFGGGGRGGGGGFGGRGGGR
GGGRGGGRGGGRGGFSPRPKQGIQSFKGTKKSFD*
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mRNA from alignment at H-elongata_contig17642:1622..6090+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig17642.4615.1 ID=mRNA_H-elongata_contig17642.4615.1|Name=mRNA_H-elongata_contig17642.4615.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4469bp|location=Sequence derived from alignment at H-elongata_contig17642:1622..6090+ (Himanthalia elongata Himel1 dioecious)
CTTCCTTCTGTTAAAAGTGTGACCAACAACAAGGGTAGTACTAATCTCTT
AAAATAGTAATTAAACAAGGTGTGTAAGGTCATATTTTAAAAAATAAAAC
CCAAGAGCAAAAACTAAGCCAGACAAAGACTCTTTCACAAACTTCAAAAG
AAAAATATAGCAAATCCTAATTGTGTAACGTTAAGAGAATATCCAATTTT
AAGCTATTCTCATCAAAGTCATCCAAAACACGCCTACGCATTTTAATAAT
AGTCTTGTTTTTTGTGCTCGCGACCGAAATCCCTTTTAAGCAGTGATATC
GTTTCATTCCCTTTCCGCCGTCCCATCATTCTATCATGCTGTATATACTA
TAGCCAAAAAAGGTAGCAAAGGCTGTTACCACGCCGAACAAGAAAAAGGC
GGACGATGATGATGACGAAGATGATGACGAAGATGACGAGGACGATGATG
ATGACGAGGACGATGATGAGGATGAGGATGAGGACAAGGCCAAAAATACT
GCCAAGGCCTCTGCATCGACCAAGAAAACCGAGAAGGAGGAGGAAGAGGA
GGAGGATGAAGACGATGATGATGACGATGTAAGGTTCTTAAGGGGAGGGA
TGCAATGTGAACTCTACTCCAATGCCGTGTGAAGTGCCTCTTTTGAAAAG
TTTCTTTAGCAAGCCTTTTAAAAGTTTCCTTAGCAAGATGTTCTTTCTAA
ATGTAAATCTGTCCGTTTCCGGTGATTACAAATCTATGCACCACTCCAGA
AGGTGTTCACGTGTGGAGAAAGCACCAAATCACCATCTTTCGTATGAGGA
ATCGGAGAGGTTGTCGTTTAACGATTGAAATGCTAAAGCAGGAAATCTAG
TTCGTCAGTTATTGTTACTTATGTAATTTGTGGTCATCGAGTTTATCATT
TTTTTTGCGCGTCCCCTTTTGAAGGCCAAAATGTCCGATGATATGACAAA
ATATTTTCTGAAACTTACGAAAGTGGTGTGGCACTTTATCGCTACGTATG
AGGACGTTTGTGGTGCGGTTAACGCGGCGTGATTTGTGTTTTTTGTTTAG
AAATTCAAAGTCTTGATTTATTCCTCCCACCCCCTCTGCGCTCCTGAGGT
TTGTTGGAGACGATAAGATATTGGTTGAGAGGTACTGTAAGGATTGTTCG
TAACGCTTTTTTTGTTTTTGATTATGATGAAACTCCGCTTTTGATTTAAT
CGACTCGATCTTAGTATATAATGTGGTCAAATTACATGTCCATTGGTCCT
TCCCGCTGGCGTTGTCATATCACCTGCAGGATGATGATGAGGATGATGAT
GATGATGACGACGACGAAGAGGAAGAAGAAAAGCCTTCCAAAAAGCGTAA
AGCCGAAGACGCCGAGAATGGTGACGCGAAGAAGGTGGTGCGTGGTTGTT
TTTTGTTTTACCAATCATGCTTGCCCAAAGGTTAGAATATTCAAGGACGC
GTTGTTTTAGCCTGACATGCTTCTGCAAAAAGGCTAAGAATTCAGTATGC
GTTCAGTGCCACAGCCGGATGCTTGTCTAATTTCGTTTTGATCGTTAATT
TTCTTTCGCTCGTTTTTTCGTTTATTTTTGTCTGACGCCGGCGCCTTTTA
TGTGCTATTAATAGACGAAGGCCGAAGAAAACACCAAGGTTTACGTCAAA
GGACTGCCTTGGGATACTCCTGATCAGGAATTGAAAGATTTCTTTAAGGC
GTGCGGAAAGGTGTGTATATTTTGTTAAAGTAGCCTTTGAACTTCAGTAT
TTTGTGTAGCATTTCTCAGCACCATCACAAAGAACCGATTTTTTTATCAG
CAAATATTATACGACGTACATGGTAGATGGATATTTCTCATCTTGTAAAG
CCTTCACTAAATATATATTTTGGCAAAAAAAGCCTTATATAAATGTCTTG
TTTTCGTTTCTCGTATCGTTTCTTCTTCTTTTATCAGATTGAGATCATCG
ACCAACCGAAGAATCCCGACGGACGCTCTTCCGGTACAGCGTTTGTGACC
TTTAAAGATTCTGCCGGCGCCACGAAGGCGGTTGGGGTGAGGAAAATTTA
GTTTTTTGTAAAAAATTGTACGCCACCGCTCATTCCTGAATATTTTATTT
CCTCTCAGCTCGATCCTCGATGTACCATGAAGCTTATCCATTTTCTGCCA
ACTCTGCTTCGACATTTAAAAACTACTCGTCGTGTATGTTTTTATTAGAA
AAACGTTGAACTTATTCCAACCCTCCGAACACCACACTTTATTAGCACCA
TGAGAGGTGCAGTCCAGGGGATCAACTATCGGTGATTCAAGAGAATGACT
TGGCAGTAGTCGACTCAAAAGACGTCAGTTTAATCTACTGTTAAGCAGTG
CACATTTGATAATAAGAAACTTAAAAATACTTTCCTCTTGTTGGCGTGCA
GATGGACGGCCAAGAGCTTGGTGGGCGGTGGTTAAACATCATTATGTCGT
TCGAGAGGCCCGGGGCTAACGCACGAACCGGCGGATCGAAGCCAAAGCCC
GAAGGATGCACCACGGTCTTCATCGGTAACCTGTCGTGGTCTATTGACGA
GGTGACTCCATGATAAGATAGGCTAGTCGGTCGTCTTTTGACATCTTAAT
CTACAGTACCCAAACAATATTGGCCTTTTTGGGATATTGGCAGATTAGCT
TGACCGGTGTCGTAATGTTTCCCTTTCTGCATCCCTTTTATTGAACAACA
GGAAACTATCCGTCAGACTTTTGGAGAGTGTGGTGATATCAAGACCGTCC
GCTTCGCGGAGGACCGAGAGACTGGGGAGTTCCGAGGATTCGGTCACGTA
GAGTATTATGACGGGTCTTGCGTCGACGCTGCCGTCGAGCTTGCAGGGTC
AAACGTTATGGGACGGCCCATTCGGGTGAGCGATAATGACATTTGATTTG
TTCTTATTATATCTTTTCGTGTTATTTTTTCAACAAGCTGTAAAAATCCC
CTTCTCCCAAAACCGTAACACATTTGTCCCGATGGCGATTTAAATCTAAT
TATAGATTCGTTCCGGTTGCCCGTGGCATTCCGGTGACACTTGTGCGTCA
ACCAGGTTGACTACGCTGCCCCTCGCGCTCCTCGCGAAGGATCTTTTGGA
GGAGGTGGACGTGGTGGTGGTGGTTTCGGTGGTGGAGGCCGAGGTGGAGG
CGGAGGATTTGGTGGACGCGGTGGTGGTCGGGGAGGAGGAAGGGGCGGTG
GACGTGGAGGTGGAAGAGGAGGCTTTAGTCCTCGCCCGAAGCAGGGCATC
CAGTCGTTCAAGGGCACCAAGAAGTCTTTTGATTAGATGGCCGATTAGAG
ATTCAAACAAGAATGTATTTTACCATGTCTTCTTGAGAGGGGTTTGCTCC
GCATCCGTACCATGTATGCCCTTTATTCAATGATCTGCCCCGTCTTTTGG
GTGGGGAAGGTAGTAGGCGGCGCAGGCTTGGGGAGAAGAGTTGCCGTTAA
ATGTTGGATAGGACATAAATCATGTGTCGGGTTTATAATGGTTTATTACG
TAATCGCTTCTTCCGTACCCACTTGTTTATTTGTTATCATTGCCAATATG
AAATGAAATAGTTTTTTTCAAGTCTGATATAATAAAAAGAAACCCCCATT
CTTATCCCGCCTATTACTCTTTTGATATTTATTTTCTAGAACGTCACGGC
GTTACACATCAGAATAAAACTTGAAATCCAGTTCCGAAAGATAAAAAAAT
GCGAAAGCTAGTGACCAATGTTGAATGATGTTTGGTTTACCAAGCCTCGT
TCTATCATTCGAACCTGACGATAGTTGGTCCCTGGACTGTACGTACCTCT
CACGGCGCTGAGAAGGTGTGGATGTTCGGAGGGTTGGAATGGGTTCAAGT
TTTTTTTAATAGAAAATTTTGAACTGCACCACCTCTCATGGAGCTATGAA
GGCTTCGCCGATCTACGGTTATTTTACAACCGACCGTGTCAGCCGGTTCA
CAGCAGCACTAGAGAGTAGTTATTATTTTGTGCCTTTACCTCTAATCACT
AACCAGAGCGCGGATTTTTATCTAAAAACACACGAACTCGAACATCCGCG
CTTTCTTAGCACTGTGAGATGTTGTTAGTCCAGGGAACAAACTATCGTCA
GTTTTGGGAAAATGTGGATATTACTACCTTATGAGCACAAAATTGTCATA
CACATGTTATTATTCGTGAAGTTCATCGGATCGATGGTTTAATGTCGGGG
ATCTTGTCATTAACCCATACATGATTATTTATTAGGCCATTATACGCTCC
CAGGACCTGAAATGTATTTAACCATGTTCCTTTTTAACCCTTAATTCACT
CTCTAGATGTATACTGTAAAAACTTTGTGATCAATAGTAGTATACTGTAG
GTTATTTTTATTTTACTTTAAAATAAAATCATACTGCATGGAATTTGTAT
AAGCCCTTAACCCCTCCCCTCTACTGCTGAACCCATCTCGCGAGACCAAA
TTTTCAGGCGCGAACGGGG
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Coding sequence (CDS) from alignment at H-elongata_contig17642:1622..6090+

>mRNA_H-elongata_contig17642.4615.1 ID=mRNA_H-elongata_contig17642.4615.1|Name=mRNA_H-elongata_contig17642.4615.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1110bp|location=Sequence derived from alignment at H-elongata_contig17642:1622..6090+ (Himanthalia elongata Himel1 dioecious)
ATGGACGGCCAAGAGCTTGGTGGGCGGTGGTTAAACATCATTATGTCGTT
CGAGAGGCCCGGGGCTAACGCACGAACCGGCGGATCGAAGCCAAAGCCCG
AAGGATGCACCACGGTCTTCATCGGTAACCTGTCGTGGTCTATTGACGAG
ATGGACGGCCAAGAGCTTGGTGGGCGGTGGTTAAACATCATTATGTCGTT
CGAGAGGCCCGGGGCTAACGCACGAACCGGCGGATCGAAGCCAAAGCCCG
AAGGATGCACCACGGTCTTCATCGGTAACCTGTCGTGGTCTATTGACGAG
GAAACTATCCGTCAGACTTTTGGAGAGTGTGGTGATATCAAGACCGTCCG
CTTCGCGGAGGACCGAGAGACTGGGGAGTTCCGAGGATTCGGTCACGTAG
AGTATTATGACGGGTCTTGCGTCGACGCTGCCGTCGAGCTTGCAGGGTCA
AACGTTATGGGACGGCCCATTCGGGAAACTATCCGTCAGACTTTTGGAGA
GTGTGGTGATATCAAGACCGTCCGCTTCGCGGAGGACCGAGAGACTGGGG
AGTTCCGAGGATTCGGTCACGTAGAGTATTATGACGGGTCTTGCGTCGAC
GCTGCCGTCGAGCTTGCAGGGTCAAACGTTATGGGACGGCCCATTCGGGT
TGACTACGCTGCCCCTCGCGCTCCTCGCGAAGGATCTTTTGGAGGAGGTG
GACGTGGTGGTGGTGGTTTCGGTGGTGGAGGCCGAGGTGGAGGCGGAGGA
TTTGGTGGACGCGGTGGTGGTCGGGGAGGAGGAAGGGGCGGTGGACGTGG
AGGTGGAAGAGGAGGCTTTAGTCCTCGCCCGAAGCAGGGCATCCAGTCGT
TCAAGGGCACCAAGAAGTCTTTTGATTAGGTTGACTACGCTGCCCCTCGC
GCTCCTCGCGAAGGATCTTTTGGAGGAGGTGGACGTGGTGGTGGTGGTTT
CGGTGGTGGAGGCCGAGGTGGAGGCGGAGGATTTGGTGGACGCGGTGGTG
GTCGGGGAGGAGGAAGGGGCGGTGGACGTGGAGGTGGAAGAGGAGGCTTT
AGTCCTCGCCCGAAGCAGGGCATCCAGTCGTTCAAGGGCACCAAGAAGTC
TTTTGATTAG
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