mRNA_H-elongata_contig176049.4597.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig176049.4597.1 vs. uniprot
Match: D7G3W1_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W1_ECTSI) HSP 1 Score: 97.4 bits (241), Expect = 1.010e-21 Identity = 47/59 (79.66%), Postives = 52/59 (88.14%), Query Frame = 1
Query: 7 RLEELGGSHVLCGLARLIMCLAEVPVFHTSGAMIRCMGVQGVIALAQTAYLIRFIYYSV 183
RLEELGGSHVLCGLARLIMC+AEVP F+ SG +IR +GV+GVIAL Q AYL RFIYYSV
Sbjct: 316 RLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSV 374
BLAST of mRNA_H-elongata_contig176049.4597.1 vs. uniprot
Match: A0A6H5K6H4_9PHAE (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6H4_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 1.080e-21 Identity = 47/59 (79.66%), Postives = 52/59 (88.14%), Query Frame = 1
Query: 7 RLEELGGSHVLCGLARLIMCLAEVPVFHTSGAMIRCMGVQGVIALAQTAYLIRFIYYSV 183
RLEELGGSHVLCGLARLIMC+AEVP F+ SG +IR +GV+GVIAL Q AYL RFIYYSV
Sbjct: 371 RLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSV 429
BLAST of mRNA_H-elongata_contig176049.4597.1 vs. uniprot
Match: A0A6H5JEM5_9PHAE (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM5_9PHAE) HSP 1 Score: 93.2 bits (230), Expect = 2.160e-20 Identity = 50/77 (64.94%), Postives = 56/77 (72.73%), Query Frame = 1
Query: 7 RLEELGGSHVLCGLARLIMCLAEVPVFHTSGAMIRCMGVQGVIALAQTAYLIRFIYYSVGPPSSHFIKPEPSGVFHG 237
RLEELGGS VLCGLARLIMC+AEVP F+ SG +IR G +GVIALAQ AYL RF+YYSV + PS V HG
Sbjct: 320 RLEELGGSRVLCGLARLIMCMAEVPFFYLSGPLIRRAGARGVIALAQLAYLTRFVYYSVLREPWWVL---PSEVLHG 393
BLAST of mRNA_H-elongata_contig176049.4597.1 vs. uniprot
Match: A0A6H5JI17_9PHAE (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI17_9PHAE) HSP 1 Score: 75.5 bits (184), Expect = 3.270e-14 Identity = 33/58 (56.90%), Postives = 45/58 (77.59%), Query Frame = 1
Query: 10 LEELGGSHVLCGLARLIMCLAEVPVFHTSGAMIRCMGVQGVIALAQTAYLIRFIYYSV 183
L+ELGGSHVL GLA ++MC EVP F+ SG+ IR +G + V+AL+Q Y++R +YYSV
Sbjct: 209 LDELGGSHVLLGLAGVVMCCGEVPFFYVSGSFIRKIGPRNVVALSQIGYIVRLVYYSV 266
BLAST of mRNA_H-elongata_contig176049.4597.1 vs. uniprot
Match: D7G4M5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M5_ECTSI) HSP 1 Score: 75.5 bits (184), Expect = 5.000e-14 Identity = 33/58 (56.90%), Postives = 45/58 (77.59%), Query Frame = 1
Query: 10 LEELGGSHVLCGLARLIMCLAEVPVFHTSGAMIRCMGVQGVIALAQTAYLIRFIYYSV 183
L+ELGGSHVL GLA ++MC EVP F+ SG+ IR +G + V+AL+Q Y++R +YYSV
Sbjct: 268 LDELGGSHVLLGLAGVVMCCGEVPFFYVSGSFIRKIGPRNVVALSQIGYIVRLVYYSV 325
BLAST of mRNA_H-elongata_contig176049.4597.1 vs. uniprot
Match: A0A8J9YL07_BRALA (MFSD6 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9YL07_BRALA) HSP 1 Score: 61.2 bits (147), Expect = 6.030e-9 Identity = 33/84 (39.29%), Postives = 51/84 (60.71%), Query Frame = 1
Query: 10 LEELGGSHVLCGLARLIMCLAEVPVFHTSGAMIRCMGVQGVIALAQTAYLIRFIYYSVGPPSSHFIKPEPSGVFHGKVSLGRVF 261
L++LGGS +L GLA +I C+AE+P+F SG +I +G + + LA Y IRF+ YS+ P + EP HG ++ G ++
Sbjct: 240 LKDLGGSQLLLGLALMINCVAEIPIFFFSGKVIHTIGHKRIFQLALFCYFIRFMSYSLIPSPWWVLMIEP---LHG-ITFGAMY 319
BLAST of mRNA_H-elongata_contig176049.4597.1 vs. uniprot
Match: A9VAW9_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VAW9_MONBE) HSP 1 Score: 57.4 bits (137), Expect = 1.370e-7 Identity = 24/57 (42.11%), Postives = 39/57 (68.42%), Query Frame = 1
Query: 10 LEELGGSHVLCGLARLIMCLAEVPVFHTSGAMIRCMGVQGVIALAQTAYLIRFIYYS 180
+EELGG+ + G+AR +MC AEVP+F SGA+ +G G + + A+++RF+ Y+
Sbjct: 284 IEELGGTKTIQGMARFVMCAAEVPMFWYSGAIFDRLGTTGCLVVTFCAFIVRFLIYA 340
BLAST of mRNA_H-elongata_contig176049.4597.1 vs. uniprot
Match: A0A7S0QMW0_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QMW0_9CRYP) HSP 1 Score: 55.1 bits (131), Expect = 3.090e-7 Identity = 25/57 (43.86%), Postives = 36/57 (63.16%), Query Frame = 1
Query: 7 RLEELGGSHVLCGLARLIMCLAEVPVFHTSGAMIRCMGVQGVIALAQTAYLIRFIYY 177
RL+ELGG+ +L GL + C E PVFH S A+IR +G+ GV+ L + +R +Y
Sbjct: 28 RLQELGGTTLLMGLTLAVNCAVEAPVFHFSAAVIRRLGLVGVLVLCLSLMAVRLAFY 84
BLAST of mRNA_H-elongata_contig176049.4597.1 vs. uniprot
Match: A0A7S1N2X9_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1N2X9_9EUGL) HSP 1 Score: 52.0 bits (123), Expect = 5.490e-6 Identity = 23/58 (39.66%), Postives = 39/58 (67.24%), Query Frame = 1
Query: 10 LEELGGSHVLCGLARLIMCLAEVPVFHTSGAMIRCMGVQGVIALAQTAYLIRFIYYSV 183
L+ LGG+ +L GL+ L E+P+F +GA+++ +GV G++ LA TAY R + Y++
Sbjct: 10 LKALGGTSLLMGLSVTFTVLCEIPLFFFTGALMKRIGVSGLLTLAMTAYFTRLVGYTL 67 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig176049.4597.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig176049.4597.1 >prot_H-elongata_contig176049.4597.1 ID=prot_H-elongata_contig176049.4597.1|Name=mRNA_H-elongata_contig176049.4597.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=91bp MSRLEELGGSHVLCGLARLIMCLAEVPVFHTSGAMIRCMGVQGVIALAQTback to top mRNA from alignment at H-elongata_contig176049:691..963+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig176049.4597.1 ID=mRNA_H-elongata_contig176049.4597.1|Name=mRNA_H-elongata_contig176049.4597.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=273bp|location=Sequence derived from alignment at H-elongata_contig176049:691..963+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig176049:691..963+ >mRNA_H-elongata_contig176049.4597.1 ID=mRNA_H-elongata_contig176049.4597.1|Name=mRNA_H-elongata_contig176049.4597.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=546bp|location=Sequence derived from alignment at H-elongata_contig176049:691..963+ (Himanthalia elongata Himel1 dioecious)back to top |