mRNA_H-elongata_contig1746.4539.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig1746.4539.1
Unique NamemRNA_H-elongata_contig1746.4539.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig1746.4539.1 vs. uniprot
Match: A0A6H5K6L1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L1_9PHAE)

HSP 1 Score: 561 bits (1445), Expect = 6.100e-187
Identity = 288/479 (60.13%), Postives = 361/479 (75.37%), Query Frame = 3
Query:    3 STTVYECPNSDACSGGSDVSSYCSEGFIGPLCAVCDYDYYPSGSYECATXXXXXXXXXXXXXIIFGGVIGLFLVFLMKGASVIEEKAREALEDDDDNEEAQAKVLGALNARIYQFVKQWKETLVVRLKIMVTHFQVVTTFPTVLDVQWPDAFSRYADKFSIISLDFWGILTQTCFFSSDFLKQLVFTTLLPFAIVLILVLNYMRGVRKAGSDPIKKRAAWDTMAAGVLLTAFFFYIITSTLVLKAFDCKEFEDGSSYLKADYSINCDSITYTFIYRYGIAMAIIYPAGIPATYLIALYLRRRHINPNPLDPDTSMMTREADPTIQKTKFLWGTYRPSVYFYEVWECVRKLFLTGLLVYFKEGTSTQVVVAILLTLAGLRVLSGLRPYQREDENNLAEASIWVTFITLFVGLIIKAGVAEDDGYDSVALGVILTFMNMSLLVLAVFQIFWTTSVYFKEKWSEFLGVELN-----AGKGEN 1424
            S  VYECPN+DAC GG+   +YCS+GF GPLCAVC+ DYYPSGSYEC         XXXXXX                                +D   +    +G  N+++++FVKQWK+TLVVR KI+VTHFQ+VTTFP VLDVQWP+AF+RYADK S+ISLDFWG+L+Q+C+F  DFLK+LVFTTLLP  IV +L+  Y + VR   ++   +RAA+D  A GVLLT FFFYI+TSTL+++AFDC++F+DGSSYLKAD+ I+C+S  YTFIY Y I MAII+PAGIP TYL  LYL +  INP+P++P+ S+  RE+D TI+KTKFLWGTYRP+VY+YEVWECVRKLFLTGLLVYF+EGTSTQVV+A+L+TLAGLRVL+GL+PYQREDENNLAEAS+WVTF+TLF GL+IKA VA++DGYD+VALGVIL+ MN +L  LA FQI WTTS  FK+      G++++     +G+G N
Sbjct:  102 SDIVYECPNADACVGGATAETYCSDGFKGPLCAVCENDYYPSGSYECLECSGGNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANDAAASNVMAVGT-NSKVFKFVKQWKDTLVVRFKILVTHFQIVTTFPVVLDVQWPEAFNRYADKVSVISLDFWGLLSQSCWFQPDFLKRLVFTTLLPLGIVAVLMAQYAKTVRTRSTEA-SRRAAFDNTAGGVLLTGFFFYIVTSTLIMEAFDCQDFDDGSSYLKADFRISCNSNKYTFIYAYAIIMAIIFPAGIPVTYLAVLYLGKERINPDPVNPEVSIKKRESDATIKKTKFLWGTYRPAVYYYEVWECVRKLFLTGLLVYFEEGTSTQVVIAMLITLAGLRVLAGLQPYQREDENNLAEASLWVTFLTLFAGLLIKADVADEDGYDTVALGVILSIMNAALFALAAFQILWTTSQLFKDTCGGAFGIDISKKQRPSGQGHN 578          
BLAST of mRNA_H-elongata_contig1746.4539.1 vs. uniprot
Match: D7G9D7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9D7_ECTSI)

HSP 1 Score: 534 bits (1375), Expect = 3.590e-179
Identity = 265/407 (65.11%), Postives = 334/407 (82.06%), Query Frame = 3
Query:  189 IIFGGVIGLFLVFLMKGASVIEEKAREALEDDDDNEEAQAKVLGA-LNARIYQFVKQWKETLVVRLKIMVTHFQVVTTFPTVLDVQWPDAFSRYADKFSIISLDFWGILTQTCFFSSDFLKQLVFTTLLPFAIVLILVLNYMRGVRKAGSDPIKKRAAWDTMAAGVLLTAFFFYIITSTLVLKAFDCKEFEDGSSYLKADYSINCDSITYTFIYRYGIAMAIIYPAGIPATYLIALYLRRRHINPNPLDPDTSMMTREADPTIQKTKFLWGTYRPSVYFYEVWECVRKLFLTGLLVYFKEGTSTQVVVAILLTLAGLRVLSGLRPYQREDENNLAEASIWVTFITLFVGLIIKAGVAEDDGYDSVALGVILTFMNMSLLVLAVFQIFWTTSVYFKEKWSEFLGVELN 1406
            I+F   + +FLV L K +S +EEKARE   DDD N+ A + V+    N+++++F+KQWK+TLVVR KI+VTHFQ+VTTFP VLDVQWP+AF+RYADK S+ISLDFWG+L+Q+C+F  DFLKQLVFTTLLP  IV +L+  Y + VR   ++   +RAA+D  A GVLLT FFFYI+TSTL+++AFDC++F+DGSSYLKAD+ I+C S  YTFIY Y I MAII+PAGIP TYL  LYL +  INP+P+ P+ S+  RE+D TI+KTKFLWGTYRP+VY+YEVWECVRKLFLTGLLVYF++GTSTQVV+A+L+TLAGLRVL+GLRPYQREDENNLAEAS+WVTF+TLF GL+IKA VA++DGYD+VALGVIL+ MN +L  LA FQI WTTS +FKEK     G++++
Sbjct:    5 ILFLAALAVFLVVLSKASSTLEEKARE--HDDDANDAAASNVMTVGTNSKVFKFIKQWKDTLVVRFKILVTHFQIVTTFPVVLDVQWPEAFNRYADKVSVISLDFWGLLSQSCWFQPDFLKQLVFTTLLPLGIVAVLMAQYAKTVRTRSTEA-SRRAAFDNTAGGVLLTGFFFYIVTSTLIMEAFDCQDFDDGSSYLKADFRISCGSNKYTFIYVYAIIMAIIFPAGIPLTYLAVLYLGKERINPDPVHPEVSIKKRESDATIKKTKFLWGTYRPAVYYYEVWECVRKLFLTGLLVYFEQGTSTQVVIAMLITLAGLRVLAGLRPYQREDENNLAEASLWVTFLTLFAGLLIKADVADEDGYDTVALGVILSIMNAALFALAAFQILWTTSQFFKEKCGGAFGIDIS 408          
BLAST of mRNA_H-elongata_contig1746.4539.1 vs. uniprot
Match: A0A836CJ54_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ54_9STRA)

HSP 1 Score: 285 bits (730), Expect = 7.610e-80
Identity = 152/359 (42.34%), Postives = 219/359 (61.00%), Query Frame = 3
Query:  330 ARIYQFVKQWKETLVVRLKIMVTHFQVVTTFPTVLDVQWPDAFSRYADKFSIISLDFWGILTQTCFFSSDFLKQLVFTTLLPFAIVLIL--------VLNYMRGVRKAGSDPIKKRAAWDTMAAGVLLTAFFFYIITSTLVLKAFDCKEFE------DGSSYLKADYSINCDSITYTFIYRYGIAMAIIYPAGIPATYLIALYLRRRHINPNPLDPDTSMMTREADPTIQKTKFLWGTYRPSVYFYEVWECVRKLFLTGLLVYFKEGTSTQVVVAILLTLAGLRVLSGLRPYQREDENNLAEASIWVTFITLFVGLIIKAGVAEDDGYDSVALGVILTFMNMSLLVLAVFQIFWTTSVY 1364
            AR   ++KQ   TL+VR KI+VTHFQ+V   P +L V +P +F+   +  ++ +LDFWG+L+  CFF  +FL +L+F+TLLP AI+  +        VL   RG    GS  + +  +WD      LLT F FY++ ST VL+ FDC   +      + +SYL+ADYS++CDS  Y     Y I M  +YP G+P  Y   L L R+ ++P   D   SM  R+AD  ++KT+FLWG+YRP  ++YEVW  + KL L+GLLVYF++GT TQ  VA+LLTL  + + + + P+ R DEN LAE + W T +TL   L+I A     DG +   LG IL+ +N+ ++VLAV Q+FW+ S +
Sbjct:  157 ARAVAWLKQRSATLMVRFKILVTHFQIVAGLPALLRVNFPQSFTALTNTLNVFNLDFWGLLSSGCFFEVNFLNKLLFSTLLPLAIIAAIFGVHGARCVLARGRGSGSGGSA-LWRHGSWDASLQAALLTLFMFYVVASTTVLQTFDCDTVQLSSATGETASYLRADYSVDCDSAAYRRSRVYAIIMTAVYPIGVPFLYASLLLLSRQRLDPVRADAKRSMEVRDADAGVRKTRFLWGSYRPRAFWYEVWLTLYKLLLSGLLVYFRQGTPTQTTVALLLTLVAMWLQTLVAPFTRRDENRLAECAYWATILTLIAALLISASDTGSDGVNMALLGAILSIINLLVIVLAVVQLFWSASAW 514          
BLAST of mRNA_H-elongata_contig1746.4539.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 1.730e-47
Identity = 136/447 (30.43%), Postives = 213/447 (47.65%), Query Frame = 3
Query:    3 STTVYECPNSDACSGG-SDVSSYCSEGFIGPLCAVCDYDYYPSGSYECATXXXXXXXXXXXXXIIFGGVIGLFLVFLMKGASVIEEKAREALEDDDDNEEAQAKVLGALNARIYQFVKQWKETLVVRLKIMVTHFQVVTTFPTVLDVQWPDAFSRYADKFSIISLDFWGILTQTCFFSSDFLKQLVFTTLLPFAIVLILVLNYMRGVRKAGSDPIKKRAAWDTMAAGVLLTAFFFYIITSTLVLKAFDCKEFEDGSSYLKADYSINCDSITYTFIYRYGIAMAIIYPAGIPATYLIALYLRRRHINPNPLDPDTSMMTREADPTIQKTKFLWGTYRPSVYFYEVWECVRKLFLTGLLVYFKEGTSTQVVVAILLTLAGLRVLSGLRPYQREDENNLAEASIWVTFITLFVGLIIKAGVAEDDGYDSVALGVILTFMNMSLLVLAVFQ 1340
            ST V  C N DAC GG +  + YC EG+ GP CA+C  DY     + C+              +    VIGLF V      +V+   A       D N         A+   + +++       +  LKI+V  +Q+VT F +  +V +PD + R+ +   + + D   +L+  C    DF  +L+ +T+ P   +L L   Y  G R    +    +  WD   + VLL  F  Y   S++V + F C + E G  YL+ADY I CDS  +     Y   M ++YP GIPA Y  AL LR R +     DPD     RE  P +     LW  YRPSVY+YEV EC R++ LTGL+V+    T+ Q+ + +++T+    +   LRPY +  +  ++  S  V F++++V L++K  V+ + G        +L   +  +++  V +
Sbjct:  574 STEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCPNRAGGILLATAL---AVIGLFTV-----VAVVSYVAWRV----DPNTGC------AMAGHLKRYLP------LQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYG-ALLLRDRDVLEK--DPDG----REDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVE 989          
BLAST of mRNA_H-elongata_contig1746.4539.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 3.390e-45
Identity = 124/451 (27.49%), Postives = 211/451 (46.78%), Query Frame = 3
Query:    3 STTVYECPNSDACSGGSDVSSYCSEGFIGPLCAVCDYDYYPSGSYECATXXXXXXXXXXXXXIIFGGVIGLF-----LVFLMKGASVIEEKAREALEDDDDNEEAQAKVLGALNARIYQFVKQWKETLVVRLKIMVTHFQVVTTFPTVLDVQWPDAFSRYADKFSIISLDFWGILTQTCFFSSDFLKQLVFTTLLPFAIVLILVLNYMRGVRKAGSDPIKKRAAWDTMAAGVLLTAFFFYIITSTLVLKAFDCKEFEDGSSYLKADYSINCDSITYTFIYRYGIAMAIIYPAGIPATYLIALYLRRRHINPNPLDPDTSMMTREADPTIQKTKFLWGTYRPSVYFYEVWECVRKLFLTGLLVYFKEGTSTQVVVAILLTLAGLRVLSGLRPYQREDENNLAEASIWVTFITLFVGLIIKAGVAEDDGYDSVALGVILTFMNMSLLVLAVFQ 1340
            ST + EC +  AC GGS + +YCSEG+IGP CAVC   Y P  S  C +             ++F   IGL      +V + +  SV+E   R+         +   +   AL AR+ Q V       +  +KI+V  +Q+VT +  V  +++P A+  +     +++LD   IL+  C + ++F  +L+  T+ P  ++ +L   Y+   R+        R       +  L   F  Y   S  + + F C   +DG+SYL+ADYS+ CD+  +T    Y     ++YP GIP  +   L+  R  +             RE    ++    LW  Y+PS Y+YEV EC R++ LTG  V+    +S QV + +LL    + V   L P+ R  E  L  A  +V F ++++ L+++  V+++          ++   ++++ ++ V Q
Sbjct:  580 STDIRECFHKKACDGGSAIGTYCSEGYIGPYCAVCAAGYSPGYSRTCKSCMGNSKKSA----LVFAAAIGLLALAAVMVLVSRLVSVVEVGPRQQXXXXXXGSKGWRRTCSALQARVRQTVP------LTAVKIVVVVWQIVTQYSDVAGIEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYVVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCIFGWWLFKNRHELKQE---------DREGQAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVMAHVAMFLVVVVQ 1011          
BLAST of mRNA_H-elongata_contig1746.4539.1 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 7.150e-45
Identity = 126/448 (28.12%), Postives = 210/448 (46.88%), Query Frame = 3
Query:    3 STTVYECPNSDACSGGSDVSSYCSEGFIGPLCAVCDYDYYPSGSYECATXXXXXXXXXXXXXIIFGGVIGLFLVFLMKGASVIEEKAREALEDDDDNEEAQAKVLGALNARIYQFVKQWKETLVVRLKIMVTHFQVVTTFPTVLDVQWPDAFSRYADKFSIISLDFWGILTQTCFFSSDFLKQLVFTTLLPFAIVLILVLNYMRGVRKAGSDPIKKRAAWDTMAAGVLLTAFFFYIITSTLVLKAFDCKEFEDGSSYLKADYSINCDSITYTFIYRYGIAMAIIYPAGIPATYLIALYLRRRHINPNPLDPDTSMMTREADPTIQKTKFLWGTYRPSVYFYEVWECVRKLFLTGLLVYFKEGTSTQVVVAILLTLAGLRVLSGLRPYQREDENNLAEASIWVTFITLFVGLIIKAGVAEDDGYDSVALGVILTFMNMSLLVLAVFQIF 1346
            S  V EC  + AC+GG+D  +YC++G+ GP C+VC   Y P  +Y+C                   GV            +V+       ++ DD  ++A  + L    +R + FV        V  KI+V  +Q++T F  +    +P+ +  + +  + ++LD   IL+ +C   +DF  +L+  T+ P  ++ +L L ++ G ++        RA  +   +  L   FF Y   S  V + F C   +DG SYL+ADYS+ CD+  Y     Y   M  +YP GIPAT+   L   R+         D     R+    +Q    LW  Y+PS Y+YE+ E VR++ LTG+ V+   G+S Q+ V +LL +  L +   L P+ ++ +  L      V   +++V L++K  V+E+      A  V+L   N+ + +  V Q F
Sbjct:  597 SQVVVECYLTSACAGGTDPKNYCADGYEGPYCSVCADGYAPGTAYQCHECSGTSMGSAV-------GVAXXXXXXXXXXXAVVAADLVRVVDGDDSIKDA--RTLKGRLSRFHAFVVTAFPLTTV--KIVVVAWQIITQFGAIAGFVYPEEYQDFLNALTPVNLDIGFILSYSCVVITDFFDRLLIATIGPVVVLALLALTFVVGRKRNIDSEAAVRAVKNKHLSAALFVMFFIYSSVSFTVFQTFVCDTLDDGVSYLRADYSLTCDTPRYGAFRGYAAVMVCVYPIGIPATFAWLLGSNRQ---------DLQKADRDRLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQMAVVLLLAVVFLFISESLSPFTKKIDMALYRWGNGVVLASIYVALLLKVNVSEEGSETLSAFVVVLILANVCMAITLVVQSF 1024          
BLAST of mRNA_H-elongata_contig1746.4539.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 4.070e-43
Identity = 122/421 (28.98%), Postives = 198/421 (47.03%), Query Frame = 3
Query:    3 STTVYECPNSDACSGG-SDVSSYCSEGFIGPLCAVCDYDYYPSGSYECATXXXXXXXXXXXXXIIFGGVIGLFLVFLMKGASVIEEKAREALEDDDDNEEAQAKVLGALNARIYQFVKQWKETLVVRLKIMVTHFQVVTTFPTVLDVQWPDAFSRYADKFSIISLDFWGILTQTCFFSSDFLKQLVFTTLLPFAIVLILVLNYMRGVRKAGSDPIKKRAAWDTMAAGVLLTAFFFYIITSTLVLKAFDCKEFEDGSSYLKADYSINCDSITYTFIYRYGIAMAIIYPAGIPATYLIALYLRRRHINPNPLDPDTSMMTREADPTIQKTKFLWGTYRPSVYFYEVWECVRKLFLTGLLVYFKEGTSTQVVVAILLTLAGLRVLSGLRPYQREDENNLAEASIWVTFITLFVGLIIKAGVAED 1262
            S  V+ C NSDAC GG +  + YC +G+ GP CAVC   Y    ++ C                   G I L  V  +    V    A  A+            V   + AR+ Q++          +KI++  +Q++T F +V +V +PD + R+ D   + + D   +L+  C F  DF  +L+ +T+ P   +L L   Y   V          +  W+   + VLL  F  Y   S  + KAF C+E EDG++YL+ADY+I+CDS  +     Y   M ++Y  GIPA Y   L+  R  +  +  D       RE       T  LW  Y+PSV++YEV EC R++ L G++V+    T+ Q+ + +++  A + V  GL P+  + +  L      V F+++++ L++K  V+ +
Sbjct:  813 SEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFACTRCSGG------------AGRIALAAVLAVVVLCVAFAVASYAMSG------RVGDVRSGVVARLGQYIPLQS------VKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHAD-------REQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGE 1202          
BLAST of mRNA_H-elongata_contig1746.4539.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 4.760e-43
Identity = 122/447 (27.29%), Postives = 209/447 (46.76%), Query Frame = 3
Query:    3 STTVYECPNSDACSGG-SDVSSYCSEGFIGPLCAVCDYDYYPSGSYECATXXXXXXXXXXXXXIIFGGVIGLFLVFLMKGASVIEEKAREALEDDDDNEEAQAKVLGALNARIYQFVKQWKETLVVRLKIMVTHFQVVTTFPTVLDVQWPDAFSRYADKFSIISLDFWGILTQTCFFSSDFLKQLVFTTLLPFAIVLILVLNYMRGVRKAGSDPIKKRAAWDTMAAGVLLTAFFFYIITSTLVLKAFDCKEFEDGSSYLKADYSINCDSITYTFIYRYGIAMAIIYPAGIPATYLIALYLRRRHINPNPLDPDTSMMTREADPTIQKTKFLWGTYRPSVYFYEVWECVRKLFLTGLLVYFKEGTSTQVVVAILLTLAGLRVLSGLRPYQREDENNLAEASIWVTFITLFVGLIIKAGVAEDDGYDSVALGVILTFMNMSLLVLAVFQ 1340
            ST V  C ++DAC GG +  S YC EG+ GP C +C   Y    S+ C+              I    V+ L +VFL    +V+             + E      G +   + +++          LKI++  +Q++T F +V +V +PD +    D   + + D   +L+  C    +F  +L+ +T+ P   +L+L   Y    R    +P K    W+     VLL  FF Y   S+ + +AF C + +    YL+ADYSI C+S  +  I  Y   M +IY  GIPA Y   L+  R  +     DPD     RE  P ++    LW  Y+P+V++YEV EC R++ L G++V+    T+ Q+ V +L+  A   +  GL PY    +  ++     V F++++V L++K  V+++          +L  +++ +++  + +
Sbjct: 1067 STEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENSAGG-----IAVAVVLALLIVFL--AVAVVSYVT---------SGEVGMGRKGGIVELVTRYIPLQS------LKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDE--DPD-----REEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVE 1484          
BLAST of mRNA_H-elongata_contig1746.4539.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI)

HSP 1 Score: 177 bits (450), Expect = 5.570e-42
Identity = 128/450 (28.44%), Postives = 211/450 (46.89%), Query Frame = 3
Query:    3 STTVYECPNSDACSGGSDVSSYCSEGFIGPLCAVCDYDYYPSGSYECATXXXXXXXXXXXXXIIFGGVIGLF-----LVFLMKGASVIEEKAREALEDDDDNEEAQAKVLGALNARIYQFVKQWKETLVVRLKIMVTHFQVVTTFPTVLDVQWPDAFSRYADKFSIISLDFWGILTQTCFFSSDFLKQLVFTTLLPFAIVLILVLNYMRGVRKAGSDPIKKRAAWDTMAAGVLLTAFFFYIITSTLVLKAFDCKEFEDGSSYLKADYSINCDSITYTFIYRYGIAMAIIYPAGIPATYLIALYLRRRHINPNPLDPDTSMMTREADPTIQKTKFLWGTYRPSVYFYEVWECVRKLFLTGLLVYFKEGTSTQVVVAILLTLAGLRVLSGLRPYQREDENNLAEASIWVTFITLFVGLIIKAGVAED-DGYDSVALGVI-LTFMNMSLLVLA 1331
            ST + EC +  AC GGS V +YC+EG+IGP CAVC   Y P  S  C +             ++F   IG       +  + +  SV+E    +         +   +   A  AR+ Q V       +  +KI+V  +Q+VT +  V  V++P A+  +     +++LD   IL+  C + ++F  +L+  T+ P  ++ +L   Y+   R+        R       +  L   F  Y   S  + + F C   +DG+SYL+ADYS+ CD+  +T    Y     ++YP GIP  +   L+  R  +             RE+   ++    LW  Y+PS Y+YEV EC R++ LTG  V+    +S QV + +LL    + V   L P+ R  E  L  A  +V F ++++ L+++  V+++ D    V  GVI +  + M L+V+A
Sbjct:  604 STDIRECFHKQACEGGSAVGTYCAEGYIGPYCAVCSAGYSPGYSRTCKSCMGDSKKSA----LVFAAAIGALALAAVVALVSRLVSVVEVGPPQQ-----QGSKGWRRTCSAWQARVRQTVP------LTAVKIVVVVWQIVTQYSDVAGVEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYLVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCVFGWWLFKNRHELKQE---------DRESQAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVIAHVAMFLVVVA 1029          
BLAST of mRNA_H-elongata_contig1746.4539.1 vs. uniprot
Match: D8LRF9_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF9_ECTSI)

HSP 1 Score: 176 bits (445), Expect = 2.230e-41
Identity = 144/506 (28.46%), Postives = 232/506 (45.85%), Query Frame = 3
Query:    6 TTVYECPNSDACSGGSDVSS---YCSEGFIGPLCAVCDYDY---YPSGSYECATXXXXXXXXXXXXXIIFGGVIGLFLVFLMKGASVIEEKAREALEDDDDNEEAQAKVLGALNARIYQFVKQWKETLVVRLKIMVTHFQVVTTFPTVLDVQWPDAFSRYADKFSIISLDFWGILTQTCFFSSDFLKQLVFTTLLPFAIVLILVLNYM----RGVRK--------------------------------------AGS--------DPIKKRAAWDTMAAGVLLTA-FFFYIITSTLVLKAFDCKEFED-GSSYLKADYSINCDSITYTFIYRYGIAMAIIYPAGIPATYLIALYLRRRHINPNP-LDPDTSMMTREADPTIQKTKFLWGTYRPSVYFYEVWECVRKLFLTGLLVYFKEGTSTQVVVAILLTLAGLRVLSGLRPYQREDENNLAEASIWVTFITLFVGLIIKAGVAEDDGYDSVALGVILTFMNMSLLVLAVFQIF 1346
            TT+ +C   +AC GGS +S    YC+ G+ GP CAVC   Y     +G +EC                + GG++ L   +L+    +I+E              +  + L   N+R+   V + KE  + +LKI +  FQ++T +  +  V +P AF++      +++LD   +L+ +C FS +F  +LV TTL+P A+ L L   +M    R VR                                       AGS           ++ +       GVL+TA F  Y   ST+V + F C   ++ G+++L+ADYS+ C +  +     Y   M ++YP GIP  Y   L+  R  I P   L    S   R  D  I  T  LW  YRPS Y+YEV EC R+L LTG LV+    ++ Q  VA +L++A + +   LRP+   +++ L      + F+++FV L+ K  +A+ D      +  +L  ++++L ++A  Q F
Sbjct: 1106 TTIRKCLYEEACEGGSAISQSDDYCAVGYQGPYCAVCLSGYAGGISNGCHECTEAFRAWMYVLA----VLGGLLALACAWLLF-RYLIQEPV------------SPGRFLSCRNSRM---VSKVKELPLHKLKIPIVVFQILTQYADITTVDFPPAFTKLLGFMDVLNLDMGWVLSASCIFSPNFYGRLVLTTLVPIALGLALCCTFMYAKSRTVRAGLPKANEGSSMRSVNTVVSXXXXXXXXXXXXXXPATVVAGSRSGHGIMMSEARQMSVVKRRHVGVLVTASFLVYSTVSTIVFQTFACDTLDELGTTFLRADYSLECYTPEHKLYRGYAGIMILVYPIGIPLLYAWLLFRHRHRIYPKQALRDGVSPERRLVDKKIAHTVLLWQAYRPSRYYYEVIECARRLLLTGCLVFILPNSAGQAGVACVLSVATVALFITLRPFADSNDDRLYILGAILIFLSMFVSLVPKIEIADGDDQSETVVSWLLIVLSLTLWLMAFMQCF 1591          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1746.4539.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6L1_9PHAE6.100e-18760.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G9D7_ECTSI3.590e-17965.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CJ54_9STRA7.610e-8042.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FHH1_ECTSI1.730e-4730.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L324_9PHAE3.390e-4527.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSF5_9PHAE7.150e-4528.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G301_ECTSI4.070e-4328.98Polymorphic Outer membrane protein G/I family n=1 ... [more]
A0A6H5K0E9_9PHAE4.760e-4327.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FTT9_ECTSI5.570e-4228.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LRF9_ECTSI2.230e-4128.46Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1746contigH-elongata_contig1746:1375..7950 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score174.1
Seed ortholog evalue1.5e-40
Seed eggNOG ortholog2880.D7FHH1
EggNOG OGs2BFIX@1,2S176@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-28_000530.1
Exons14
Model size2517
Cds size1395
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1746.4539.1prot_H-elongata_contig1746.4539.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig1746 2543..7058 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930012.4347458-UTR-H-elongata_contig1746:1374..14671622930012.4347458-UTR-H-elongata_contig1746:1374..1467Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1746 1375..1467 +
1691679245.736959-UTR-H-elongata_contig1746:1374..14671691679245.736959-UTR-H-elongata_contig1746:1374..1467Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1746 1375..1467 +
1622930012.45039-UTR-H-elongata_contig1746:1794..18911622930012.45039-UTR-H-elongata_contig1746:1794..1891Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1746 1795..1891 +
1691679245.7493346-UTR-H-elongata_contig1746:1794..18911691679245.7493346-UTR-H-elongata_contig1746:1794..1891Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1746 1795..1891 +
1622930012.4679236-UTR-H-elongata_contig1746:2502..25421622930012.4679236-UTR-H-elongata_contig1746:2502..2542Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1746 2503..2542 +
1691679245.758198-UTR-H-elongata_contig1746:2502..25421691679245.758198-UTR-H-elongata_contig1746:2502..2542Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1746 2503..2542 +
1622930012.7173836-UTR-H-elongata_contig1746:7058..79501622930012.7173836-UTR-H-elongata_contig1746:7058..7950Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1746 7059..7950 +
1691679245.9182448-UTR-H-elongata_contig1746:7058..79501691679245.9182448-UTR-H-elongata_contig1746:7058..7950Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1746 7059..7950 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930012.4807677-CDS-H-elongata_contig1746:2542..26461622930012.4807677-CDS-H-elongata_contig1746:2542..2646Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1746 2543..2646 +
1691679245.769727-CDS-H-elongata_contig1746:2542..26461691679245.769727-CDS-H-elongata_contig1746:2542..2646Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1746 2543..2646 +
1622930012.494393-CDS-H-elongata_contig1746:3069..31981622930012.494393-CDS-H-elongata_contig1746:3069..3198Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1746 3070..3198 +
1691679245.787882-CDS-H-elongata_contig1746:3069..31981691679245.787882-CDS-H-elongata_contig1746:3069..3198Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1746 3070..3198 +
1622930012.5134075-CDS-H-elongata_contig1746:3790..39491622930012.5134075-CDS-H-elongata_contig1746:3790..3949Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1746 3791..3949 +
1691679245.8009737-CDS-H-elongata_contig1746:3790..39491691679245.8009737-CDS-H-elongata_contig1746:3790..3949Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1746 3791..3949 +
1622930012.541948-CDS-H-elongata_contig1746:4266..43691622930012.541948-CDS-H-elongata_contig1746:4266..4369Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1746 4267..4369 +
1691679245.8086848-CDS-H-elongata_contig1746:4266..43691691679245.8086848-CDS-H-elongata_contig1746:4266..4369Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1746 4267..4369 +
1622930012.557896-CDS-H-elongata_contig1746:4526..46281622930012.557896-CDS-H-elongata_contig1746:4526..4628Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1746 4527..4628 +
1691679245.8159838-CDS-H-elongata_contig1746:4526..46281691679245.8159838-CDS-H-elongata_contig1746:4526..4628Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1746 4527..4628 +
1622930012.5696003-CDS-H-elongata_contig1746:4841..49991622930012.5696003-CDS-H-elongata_contig1746:4841..4999Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1746 4842..4999 +
1691679245.8303592-CDS-H-elongata_contig1746:4841..49991691679245.8303592-CDS-H-elongata_contig1746:4841..4999Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1746 4842..4999 +
1622930012.5799875-CDS-H-elongata_contig1746:5228..53431622930012.5799875-CDS-H-elongata_contig1746:5228..5343Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1746 5229..5343 +
1691679245.8447034-CDS-H-elongata_contig1746:5228..53431691679245.8447034-CDS-H-elongata_contig1746:5228..5343Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1746 5229..5343 +
1622930012.5939336-CDS-H-elongata_contig1746:5621..57881622930012.5939336-CDS-H-elongata_contig1746:5621..5788Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1746 5622..5788 +
1691679245.8571136-CDS-H-elongata_contig1746:5621..57881691679245.8571136-CDS-H-elongata_contig1746:5621..5788Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1746 5622..5788 +
1622930012.6069305-CDS-H-elongata_contig1746:5968..60411622930012.6069305-CDS-H-elongata_contig1746:5968..6041Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1746 5969..6041 +
1691679245.8758557-CDS-H-elongata_contig1746:5968..60411691679245.8758557-CDS-H-elongata_contig1746:5968..6041Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1746 5969..6041 +
1622930012.6233695-CDS-H-elongata_contig1746:6285..63771622930012.6233695-CDS-H-elongata_contig1746:6285..6377Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1746 6286..6377 +
1691679245.8897262-CDS-H-elongata_contig1746:6285..63771691679245.8897262-CDS-H-elongata_contig1746:6285..6377Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1746 6286..6377 +
1622930012.635913-CDS-H-elongata_contig1746:6483..65781622930012.635913-CDS-H-elongata_contig1746:6483..6578Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1746 6484..6578 +
1691679245.8999155-CDS-H-elongata_contig1746:6483..65781691679245.8999155-CDS-H-elongata_contig1746:6483..6578Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1746 6484..6578 +
1622930012.65471-CDS-H-elongata_contig1746:6960..70581622930012.65471-CDS-H-elongata_contig1746:6960..7058Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1746 6961..7058 +
1691679245.9077914-CDS-H-elongata_contig1746:6960..70581691679245.9077914-CDS-H-elongata_contig1746:6960..7058Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1746 6961..7058 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig1746.4539.1

>prot_H-elongata_contig1746.4539.1 ID=prot_H-elongata_contig1746.4539.1|Name=mRNA_H-elongata_contig1746.4539.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=465bp
MKGASVIEEKAREALEDDDDNEEAQAKVLGALNARIYQFVKQWKETLVVR
LKIMVTHFQVVTTFPTVLDVQWPDAFSRYADKFSIISLDFWGILTQTCFF
SSDFLKQLVFTTLLPFAIVLILVLNYMRGVRKAGSDPIKKRAAWDTMAAG
VLLTAFFFYIITSTLVLKAFDCKEFEDGSSYLKADYSINCDSITYTFIYR
YGIAMAIIYPAGIPATYLIALYLRRRHINPNPLDPDTSMMTREADPTIQK
TKFLWGTYRPSVYFYEVWECVRKLFLTGLLVYFKEGTSTQVVVAILLTLA
GLRVLSGLRPYQREDENNLAEASIWVTFITLFVGLIIKAGVAEDDGYDSV
ALGVILTFMNMSLLVLAVFQIFWTTSVYFKEKWSEFLGVELNAGKGENKS
MYKTRAVRQDPSREDEEAPLSSVPMSRGRTRQGILTPPLNRQPVAKKGPV
SRSREGSARPSSMS*
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mRNA from alignment at H-elongata_contig1746:1375..7950+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig1746.4539.1 ID=mRNA_H-elongata_contig1746.4539.1|Name=mRNA_H-elongata_contig1746.4539.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6576bp|location=Sequence derived from alignment at H-elongata_contig1746:1375..7950+ (Himanthalia elongata Himel1 dioecious)
CTTCCACAACCGTCTACGAGTGCCCCAATTCCGATGCTTGTTCGGGTGGA TCGGATGTATCTTCGTACTGCTCGGAGGGCTTTATCGGGCCATGTGAGTC ACCGCTGCTCGCTGCCGCATAATATATCGCGTGAACAAGTTATCTCTAGA CTTGCGGACTGCTGATGCACGCACGGGTCGTCGAGGCTCTTATTTATTTC TGAAAGCCCGGAGCTTCTCGGCTACGGACCAGACCATATTTATTGTACTG TACATTATGTTTGCCGTATCGCAATTGGCCAATTGGGTGTCAGGGAGAGA CTATAGATACTATAGAGATTATAAGGTGGGCTAGGCCACAAAGATGCCAC TTTCTTATTCTAATCCTGTCGTCGCGCTTCCAACCGCCTTCCAAATGTCT CTCGGCTCTTGACCCGCCAGTGTGTGCCGTTTGTGATTACGACTACTACC CCAGCGGTAGCTACGAGTGTGCAACATGTAGCACGGCCAACACTGCTTCA ACACTTATTACCATTATGTGAGGACAAATCATCACCATGTTGTAAAACAC TAACACTAGCAATATCTTCATCGTGGATCAAAGCTCGTTTTGGTGAAATA TCTTACTTTCTTCTGTCACGAAAATAATTCATGACATATCATGTCATATC ACGTCATATCATATCATTCATCATACATATATCGTCCGAATGCGTGTCTA CTTAATTGTAAGCGCTATCAATAAACGATTACGATTACCGTTACCGTTAC CATTACGTTGAATAAATAGAAGCACTAGCCAGAACGGTGTCTTGAGTTAG AGCGCTTGTGCTTCTATGAATACGGTATTGTACACCCCTGTTGAATACTG CCATGAGTCATGAGTGATGAGTGATATGCCAGTGTGCTAGTCTAGCATGT GGTGATAGCGTTACACTATTGCGTTTACCATTACAGTAATATATCTTTAT TTGTCTGTCACTGTCGACAATTTGACATTTCATCTCTTGCCACGTCTGAC GTCTGATGCCGACCCTTAGCTCAGCACTCGATTTGATATTCCGTCTCGGT CTTTGACCTGGCGCGCGCCGCTGCTGCCGGTTCCCTTTCCTTATCGTATG CCGTCTCGTTGTCGCTACTTGACAAAAGTATCTTCGGCGGAGTGATCGGG TTGTTCCTGGTGTTTCTGATGAAGGGTGCATCTGTTATAGAGGAAAAGGC GCGTGAAGCCTTAGAAGATGACGACGATAATGAAGAGGCTCAAGCGAAGG TGTTGGGAGCCTTGAACGCCAGGTGAGGACGTGATACGCTATGATATACT AAGTATATTGTATGATATTCCTACTGGATGCACTTTACTTTACTTGATAA AGGTTATTTGCAATGCGACATTGGTTTAGGTAATAAAGTGCATTATCTTA ATGTTAATATAGGACACAACGGTAATCAATGTTTTCTGTTTTCTGCACTA TGGTGTACTTACTATGGTAAGATGAAGCGTAAAAGGACATCGTTCGAGGC GCAACATTTTTGCTCAATTCATCTCAGCATGAAGAATAACGTCATAGCAT CAAGTATTAGTATTAATAACAAGTTACCCTCACTTGAAAGCTTAATATAT CAATAATTCATGCGTTACTAATGCATTCCCTGTAGTCTCCGCGGCGAGCT GACTTGCGCGACCTTGGGTCGGTTACTCGGTTACTAATGCAACAGGATCT ATCAGTTTGTGAAGCAGTGGAAGGAAACCCTCGTGGTGCGGCTCAAGATA ATGGTCACTCACTTTCAAGTGGTCACAACCTTCCCAACCGTCCTCGACGT GCAGTGGCCAGATGCCTTCAGCAGGTACTGCTCAGTTGCATGTTTTTGGT TTTGCCCTGACGTTTATTCGTTTCGTCTTGTACTCATAAGGCAATATCCA ATCTCCAATATCCAACCACAGCACTTCGTGATAGTACTAGTAATAGTAGA ATATCATCCTATATAGCGATGTAGTAGAATATCATTGCGCAAGTACAACC TTGCAAATAAAAATCGTACTATATATTATATATATATATATTCTGTGAGG CACTGCACTTCTTCCTTCCTTTTACCTTCCTATATATATTGCGAAGATTT CGTCAGATCTCGTCAACGCCAGCTCTTTGACAGCTTTGTTATATGCGTGC GAAGCGCGATGGCGGGGTCGTTGCCAAATTTCAACACCAATTCGGGACTA GGGTACCCACACCAATTGTTTTTACATGGAAAAACCTAGGTACCCATACC AGCAGTCCCTTGACGATGTTTTGTAGTATCCCTCTCTAAGAATGGCTTTC CCTTTCCCTTTGATAATGTACTCGTCCACGATAGAAACATTTCGTGGGCA CTCCTCGTCCTCCTCCTCCTCCTCGAAATACTTTGTTTTGTTTCGTTTTG TTTCGGGTGCTGTCAGATACGCAGACAAGTTTTCCATCATCAGCCTCGAC TTCTGGGGCATCCTGACGCAGACATGCTTTTTCAGTTCGGACTTTCTCAA GCAGCTCGTGTTCACCACGTTGCTGCCGTTCGCCATCGTACTTATCCTCG TGCTAAACTACATGCGGGGCGTTCGGTGAGTTGGTGTTCCTACATCAGTT TTAAAGTATTCATGTGTGGTGCAATCCGATTCTCGCCCTGAATGTTTCGG GTGGAGCTAGCTGCATATATGGTACTAGCGATAGAACAATGAAACAACGC CACGAGCGGACATAGTATAACGCGTCCTGTTTCACATGATTTATAGGTCT ACAGCCTCTACAGCCGAAAATATTTGTGCCTGGGACTAGGTAGGGCTACA TCGCCCATCGGCTACATCGCCCATCGTCTATCGATTTTATGCCCCCCGTG ACGCGTGATGCGCACCGTTCCATCTCTCCACCACGACTGCAGGAAGGCCG GCTCTGATCCCATCAAAAAGCGCGCTGCGTGGGATACTATGGCAGCCGGT GTGTTGCTAACCGCTTTCTTCTTCTACATTATCACGAGCACGCTGGTCAG TACGCCCTACGCCCTCCGGGTTGCCCAAGCTTGATAACATGGGCGCTGTC TTTGGTGTACGTCTGCCTTTTTGCATGGTTGTCTCCCCTTGAAGCGTGTA TCCTGAAGACGCTCTGACCTCTATTCTGTAATGCTGGTGCAAAACAAACC AGGTGCTGAAGGCGTTCGACTGCAAAGAGTTCGAGGACGGTTCGAGCTAC CTCAAGGCAGACTACTCGATCAATTGCGATTCAATCACGTATACCTTCAT TTACGTAAGTAAGGTCCTCGGGTGCCCAATATCCCCGTTCCGATCGGAAC AAAACCCCCTCCATCCCTTCATATATTATATATAGAACCAACACATGGAG TAAGAATCGTGCACGTTCTTCGTTTTTATCCGGTGTTTTCCATGTTAATG CAAAATTTCAACGAGGCTCCCTTCTCCCTTCCCCCTGTTCCGACCTTCTC TCTTCTCTCTTCTGAAGCGTTACGGTATAGCAATGGCCATCATCTACCCA GCCGGTATTCCAGCCACGTACCTGATTGCGCTCTACTTGAGAAGGCGGCA CATCAACCCCAACCCCCTCGACCCCGACACATCGATGATGACCAGGGAAG CGGACCCCACCATTCAAAAAACAAAGTAAGTATTTAAATTCGAGCTCGAT CCGACGCGGTTATTCCACTCTTAATAATAGTACTAGAATGTAAAGCGGTT ATTTCACTCTTAATAATAGCAATAGAATGTAAAGCGGTTTTTCCACTCGA TCCGACGCGGTTATTCCACTATTAATAATAGTACTAGAATGTAAAGCCTC TTGTGGCCTGACACTGTGCGCGTTATTGTATGAATAATATTGACGCCCTT AAAGGTTTCTGTGGGGAACCTATCGACCCTCCGTCTACTTCTACGAGGTC TGGGAATGCGTGCGCAAGCTCTTCTTGACGGGTCTGCTGGTGTACTTTAA GGAGGGAACATCCACGCAGGTGGGTGATGCCGCCGTGTGCGGGGTTCGAC TGTCGTTGCTCATCCTCTGCTGATCATATCAACCCGCTACGAGATGCGAG TGGGCAAACGGCGTAAACGGCGTGGAGTTCCATAAAGTACGAAGTCGTTG GGCAGGAGACGGTGGCAGAAAGATACGAACCATTGCAATTGCAACTGTCA AACTTATGTCCCTTTTGATTGTTGACGCCGGTCGAATATCCCTATTGGAC CACTTGACCCCTCGGACGGCACATGGGGCTGTGTCTACAATATTCAGGTG GTGGTCGCAATTCTCTTGACGCTAGCGGGCCTGCGCGTTCTCTCGGGACT TCGACCCTATCAGCGGGAAGATGAAAACAATCTCGCTGAGGCTTCAATTT GGGTCACGTTCATCACGCTGTTTGTTGGCCTCATAATCAAGGCAGGAGTC GCTGAAGATGACGGGTAAGTTGTGGGTGATGTTGTATTATGATTATGATT ATGTTTATTCCGGCAGTGACCCGAATATTGAGGATTAAATAGGAATTATT CGAAGCCAACACGAAGAATCTCGCCACACTAAACATACTTGTGTCAATGA TGGCCTCCACTATTAACCTTCCGTTGCTAACGTTGCCCTCGCAGGTACGA TAGCGTCGCACTTGGTGTAATCCTGACGTTCATGAACATGAGCCTCCTGG TGCTGGCTGTGTTTCAGGCGAGTTTTTTTTTAAGTTATGTGGGGTAGTAT AGTTGACATTACAGCACTGCTCAGTCCGTTTATCGTCATTTTCGATGTAG CCATTCCCTGCGCGATTAAACTGGGTAAAAGGGTCCGAACATTGGTTTTG AAACTTCGTAGAATAATATTATGTTAAAAGTAATTTTTCCAGCAGTGAGA AGTTAAAATGATTTGAAATCAGCGAGAACAGCGTTGCTGACTTGATTCGA CGGCGGAGCAGATTTTCTGGACGACTAGCGTGTACTTCAAGGAAAAGTGG AGCGAGTTCCTCGGGGTGGAGCTTAATGCTGGAAAGGGAGAAAATAAGTC CATGTGAGTCTTATCGCATGCTCTTCTGTCACGTGGAGCAAGAGAGGGGA GTCGGCGTTGGCTCACCGGATATTCTAAGTTTCAACTGTTTCATTGACCT TGCACGCAGGTACAAAACGCGCGCCGTGCGCCAAGATCCCTCGAGAGAAG ATGAGGAGGCTCCGCTTTCGTCGGTGCCGATGTCGAGAGGACGGACGCGT CAAGGTGGGTAGAGATAGAGTGGGGATGGAGTGGGCATCGCAGGATGCCA AAATGTTAACATCCCTCTACACTTGGAAAACTCCTTAACGTTCGAATTTA GTTATCTCGAAAAGAAGGGCATCGGTGTCGAAAGCAAAACGGTAGGTGGT AGAATGAAAAACCTACCCCTTGAATGGAGGTCAAGTCACGTCACGGCACG GCACGGCACGGCACACACCAACGTAACCGATACGTGGTTATTTTTCTAGA AGAACGAGATATGGGCCTTCATGCTGGCGGAGTGGCCATCTTCTTCCTTC GCTTTTGCCATTATTATATACCGTAATTGAAATAACTTAACTGCCTTCTC ACCCCCATGCTCATGTCGTAATTTCACGTCCACCAGGGATCCTCACCCCT CCGCTTAATCGCCAGCCGGTAGCTAAGAAAGGCCCTGTCAGCCGCTCGCG GGAAGGCAGCGCGCGCCCTTCGTCGATGAGTTGACCTATCAGCGCTTCCG CTGCGGCTTTGACTGTAAGCGCACCGTGCCTTAATCTCTCTCAAGGGTTA TGAGTAAGTAAAAATAGGGAACGCGCCATGAACCCCTAAGGTACCTTTTG TTTTTGTATTAGGCGCTAAAGGGATCAGTATACAAGATTAGGTAGCACTT GTAAAAATTAACTTGCTTGGTGATTGCCATACAGTTCCATGCAGTGTTTG CTGCTCGTACTGATGAAGTAGACATACCCAGGCTGTCGACACTGTATGAC AGGAAGGTTTATAGATGCAGGATACTATCATCAACAAGAAAAGAAATACC ATTAATATTAAGAGCGGTAGTGGGAAATCTCAATCACCTCGTGTTTTCGG CGTGGTTCATGCTGTATTTTGGGGGAAAGATTGATTGGCCTATGGAAGTT GGCGGAATGTTTGGCGCACGAATGAGATATCTACGGACTATAATAGTACA ATTGGTACAATTAAATAGCAGTTAGGACCACCTGTGTCAGACTATGACTT TTCACACGATTAGTAGTTATATTTGTTATTTTGGCGTTTTTATCGCCTCA AAGACCCGATTTTGCTTTCCGGCAATGTACTATTAAAATGTTGTATGTTG TGTAGCTATTGTGATAGCTATATACCCCCTTGTAAGGGCAAACGTGCGGT AAATTTGTACTACGTTCTCTAGGTATTTAGTATATAGTAGAATGTTCACC AGGTAGATTTGTGGTTACTGAACCAGCTGAGTCAGCTTCGTACAAAGAAA GAAAACCAAACCAACTATTCATCAACATTTGTTCGGTATTCTGGCGCAAC ATTTAAAGCTTCTTCAAATTTTATCAATTATCATGTTATTCGATATCAAT CATTAATCATCAATCATCAATCAGAC
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Coding sequence (CDS) from alignment at H-elongata_contig1746:1375..7950+

>mRNA_H-elongata_contig1746.4539.1 ID=mRNA_H-elongata_contig1746.4539.1|Name=mRNA_H-elongata_contig1746.4539.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2790bp|location=Sequence derived from alignment at H-elongata_contig1746:1375..7950+ (Himanthalia elongata Himel1 dioecious)
ATGAAGGGTGCATCTGTTATAGAGGAAAAGGCGCGTGAAGCCTTAGAAGA
TGACGACGATAATGAAGAGGCTCAAGCGAAGGTGTTGGGAGCCTTGAACG
CCAGATGAAGGGTGCATCTGTTATAGAGGAAAAGGCGCGTGAAGCCTTAG
AAGATGACGACGATAATGAAGAGGCTCAAGCGAAGGTGTTGGGAGCCTTG
AACGCCAGGATCTATCAGTTTGTGAAGCAGTGGAAGGAAACCCTCGTGGT
GCGGCTCAAGATAATGGTCACTCACTTTCAAGTGGTCACAACCTTCCCAA
CCGTCCTCGACGTGCAGTGGCCAGATGCCTTCAGCAGGATCTATCAGTTT
GTGAAGCAGTGGAAGGAAACCCTCGTGGTGCGGCTCAAGATAATGGTCAC
TCACTTTCAAGTGGTCACAACCTTCCCAACCGTCCTCGACGTGCAGTGGC
CAGATGCCTTCAGCAGATACGCAGACAAGTTTTCCATCATCAGCCTCGAC
TTCTGGGGCATCCTGACGCAGACATGCTTTTTCAGTTCGGACTTTCTCAA
GCAGCTCGTGTTCACCACGTTGCTGCCGTTCGCCATCGTACTTATCCTCG
TGCTAAACTACATGCGGGGCGTTCGATACGCAGACAAGTTTTCCATCATC
AGCCTCGACTTCTGGGGCATCCTGACGCAGACATGCTTTTTCAGTTCGGA
CTTTCTCAAGCAGCTCGTGTTCACCACGTTGCTGCCGTTCGCCATCGTAC
TTATCCTCGTGCTAAACTACATGCGGGGCGTTCGGAAGGCCGGCTCTGAT
CCCATCAAAAAGCGCGCTGCGTGGGATACTATGGCAGCCGGTGTGTTGCT
AACCGCTTTCTTCTTCTACATTATCACGAGCACGCTGGAAGGCCGGCTCT
GATCCCATCAAAAAGCGCGCTGCGTGGGATACTATGGCAGCCGGTGTGTT
GCTAACCGCTTTCTTCTTCTACATTATCACGAGCACGCTGGTGCTGAAGG
CGTTCGACTGCAAAGAGTTCGAGGACGGTTCGAGCTACCTCAAGGCAGAC
TACTCGATCAATTGCGATTCAATCACGTATACCTTCATTTACGTGCTGAA
GGCGTTCGACTGCAAAGAGTTCGAGGACGGTTCGAGCTACCTCAAGGCAG
ACTACTCGATCAATTGCGATTCAATCACGTATACCTTCATTTACCGTTAC
GGTATAGCAATGGCCATCATCTACCCAGCCGGTATTCCAGCCACGTACCT
GATTGCGCTCTACTTGAGAAGGCGGCACATCAACCCCAACCCCCTCGACC
CCGACACATCGATGATGACCAGGGAAGCGGACCCCACCATTCAAAAAACA
AACGTTACGGTATAGCAATGGCCATCATCTACCCAGCCGGTATTCCAGCC
ACGTACCTGATTGCGCTCTACTTGAGAAGGCGGCACATCAACCCCAACCC
CCTCGACCCCGACACATCGATGATGACCAGGGAAGCGGACCCCACCATTC
AAAAAACAAAGTTTCTGTGGGGAACCTATCGACCCTCCGTCTACTTCTAC
GAGGTCTGGGAATGCGTGCGCAAGCTCTTCTTGACGGGTCTGCTGGTGTA
CTTTAAGGAGGGAACATCCACGCAGGTTTCTGTGGGGAACCTATCGACCC
TCCGTCTACTTCTACGAGGTCTGGGAATGCGTGCGCAAGCTCTTCTTGAC
GGGTCTGCTGGTGTACTTTAAGGAGGGAACATCCACGCAGGTGGTGGTCG
CAATTCTCTTGACGCTAGCGGGCCTGCGCGTTCTCTCGGGACTTCGACCC
TATCAGCGGGAAGATGAAAACAATCTCGCTGAGGCTTCAATTTGGGTCAC
GTTCATCACGCTGTTTGTTGGCCTCATAATCAAGGCAGGAGTCGCTGAAG
ATGACGGGTGGTGGTCGCAATTCTCTTGACGCTAGCGGGCCTGCGCGTTC
TCTCGGGACTTCGACCCTATCAGCGGGAAGATGAAAACAATCTCGCTGAG
GCTTCAATTTGGGTCACGTTCATCACGCTGTTTGTTGGCCTCATAATCAA
GGCAGGAGTCGCTGAAGATGACGGGTACGATAGCGTCGCACTTGGTGTAA
TCCTGACGTTCATGAACATGAGCCTCCTGGTGCTGGCTGTGTTTCAGGTA
CGATAGCGTCGCACTTGGTGTAATCCTGACGTTCATGAACATGAGCCTCC
TGGTGCTGGCTGTGTTTCAGATTTTCTGGACGACTAGCGTGTACTTCAAG
GAAAAGTGGAGCGAGTTCCTCGGGGTGGAGCTTAATGCTGGAAAGGGAGA
AAATAAGTCCATATTTTCTGGACGACTAGCGTGTACTTCAAGGAAAAGTG
GAGCGAGTTCCTCGGGGTGGAGCTTAATGCTGGAAAGGGAGAAAATAAGT
CCATGTACAAAACGCGCGCCGTGCGCCAAGATCCCTCGAGAGAAGATGAG
GAGGCTCCGCTTTCGTCGGTGCCGATGTCGAGAGGACGGACGCGTCAAGG
TACAAAACGCGCGCCGTGCGCCAAGATCCCTCGAGAGAAGATGAGGAGGC
TCCGCTTTCGTCGGTGCCGATGTCGAGAGGACGGACGCGTCAAGGGATCC
TCACCCCTCCGCTTAATCGCCAGCCGGTAGCTAAGAAAGGCCCTGTCAGC
CGCTCGCGGGAAGGCAGCGCGCGCCCTTCGTCGATGAGTTGAGGATCCTC
ACCCCTCCGCTTAATCGCCAGCCGGTAGCTAAGAAAGGCCCTGTCAGCCG
CTCGCGGGAAGGCAGCGCGCGCCCTTCGTCGATGAGTTGA
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