mRNA_H-elongata_contig171748.4419.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig171748.4419.1 vs. uniprot
Match: A0A6H5KG47_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KG47_9PHAE) HSP 1 Score: 150 bits (380), Expect = 2.170e-40 Identity = 73/94 (77.66%), Postives = 83/94 (88.30%), Query Frame = 1
Query: 1 TIATIVDAASAPLSIVIVGVGNGDFTAMEQLDGDRNRLQDPFTGRVASRDMVQFVPFRDFSDYGSAAQHALARHVLAEIPGQFIAYMEANATYP 282
T++ IVDAA APLSIVIVGVG GDFTAM+ LDGDR RL PFTG+VASRDMVQFVPFRDF+ +GSAAQHALA+HVLAEIPGQFI+YM++N P
Sbjct: 488 TVSAIVDAADAPLSIVIVGVGQGDFTAMDHLDGDRQRLTSPFTGKVASRDMVQFVPFRDFNGFGSAAQHALAKHVLAEIPGQFISYMQSNGIDP 581
BLAST of mRNA_H-elongata_contig171748.4419.1 vs. uniprot
Match: A0A2G8LHY6_STIJA (Putative copine-8 isoform X2 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8LHY6_STIJA) HSP 1 Score: 107 bits (266), Expect = 7.380e-25 Identity = 58/94 (61.70%), Postives = 70/94 (74.47%), Query Frame = 1
Query: 13 IVDAASAPLSIVIVGVGNGDFTAMEQLDGDRNRLQDPFTGRVASRDMVQFVPFRDFSDYGSA--AQHALARHVLAEIPGQFIAYMEANATYPPP 288
IV AAS P+SI+IVGVGN DFTAME+LDGD RL F G+VA RD+VQFVPFRDF + +A +Q LA+ VLAEIP QF++YM +N P P
Sbjct: 355 IVRAASLPMSIIIVGVGNEDFTAMEELDGDEVRLS--FQGKVAERDIVQFVPFRDFENANNAVISQAQLAKEVLAEIPDQFLSYMRSNGVKPRP 446
BLAST of mRNA_H-elongata_contig171748.4419.1 vs. uniprot
Match: A0A161MJS2_TRIIF (Copine-8-like protein isoform x1 (Fragment) n=1 Tax=Triatoma infestans TaxID=30076 RepID=A0A161MJS2_TRIIF) HSP 1 Score: 98.6 bits (244), Expect = 7.780e-24 Identity = 55/97 (56.70%), Postives = 67/97 (69.07%), Query Frame = 1
Query: 1 TIATIVDAASAPLSIVIVGVGNGDFTAMEQLDGDRNRLQDPFTGRVASRDMVQFVPFRDFSDYGS-AAQHALARHVLAEIPGQFIAYMEANATYPPP 288
T IV A+S PLSI+IVG+GN DFTAMEQLDGD L G A RD+VQFVPF +S + +A+H LAR VLAEIPGQF++YM++ P P
Sbjct: 64 TCQAIVKASSLPLSIIIVGIGNADFTAMEQLDGDTVALTSG--GMRAERDIVQFVPFSKYSSNATLSARHLLAREVLAEIPGQFVSYMKSRNIVPKP 158
BLAST of mRNA_H-elongata_contig171748.4419.1 vs. uniprot
Match: A0A482QZ84_9EURY (VWFA domain-containing protein n=1 Tax=Methanosarcinales archaeon TaxID=2250255 RepID=A0A482QZ84_9EURY) HSP 1 Score: 102 bits (254), Expect = 2.630e-23 Identity = 54/96 (56.25%), Postives = 67/96 (69.79%), Query Frame = 1
Query: 1 TIATIVDAASAPLSIVIVGVGNGDFTAMEQLDGDRNRLQDPFTGRVASRDMVQFVPFRDFSDYGSAAQHALARHVLAEIPGQFIAYMEANATYPPP 288
T+ +IVDA+ PLSIVIVGVG DF+AME LDGD RL GR A+RD+VQFVPFR F+ +G+ A LA+ VLAE+PGQ ++M A P P
Sbjct: 143 TVRSIVDASVLPLSIVIVGVGGADFSAMEFLDGDGGRLA--IDGRTAARDIVQFVPFRKFASFGTGAGSMLAKEVLAEVPGQLTSFMMARGIVPKP 236
BLAST of mRNA_H-elongata_contig171748.4419.1 vs. uniprot
Match: UPI000C6D13BA (copine-5-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6D13BA) HSP 1 Score: 92.0 bits (227), Expect = 8.120e-22 Identity = 51/94 (54.26%), Postives = 66/94 (70.21%), Query Frame = 1
Query: 13 IVDAASAPLSIVIVGVGNGDFTAMEQLDGDRNRLQDPFTGRVASRDMVQFVPFRDF--SDYGSAAQHALARHVLAEIPGQFIAYMEANATYPPP 288
IV AA+ P+SI+IVGVGN DF+AME+LDGD RL G+ A RD+VQFVPFR+F + S +Q LA+ VLAE+P QF+ YM+ + P P
Sbjct: 8 IVHAATLPMSIIIVGVGNADFSAMEELDGDVVRLSS--RGKFAERDIVQFVPFREFVSGENWSKSQVLLAKEVLAELPDQFLEYMKKHNIKPKP 99
BLAST of mRNA_H-elongata_contig171748.4419.1 vs. uniprot
Match: A0A444TUV3_ARMVU (Copine domain-containing protein n=1 Tax=Armadillidium vulgare TaxID=13347 RepID=A0A444TUV3_ARMVU) HSP 1 Score: 92.0 bits (227), Expect = 1.190e-21 Identity = 53/96 (55.21%), Postives = 66/96 (68.75%), Query Frame = 1
Query: 13 IVDAASAPLSIVIVGVGNGDFTAMEQLDGDRNRLQDPFTGRVASRDMVQFVPFRDF----SDYGSAAQHALARHVLAEIPGQFIAYMEANATYPPP 288
IV+A++ PLSI+IVGVGN DF AME+LDGD RL G+ A RD+VQFVPFR+F D GSA LA+ VLAE+P Q ++YM+ N P P
Sbjct: 17 IVNASNLPLSIIIVGVGNADFNAMEELDGDVIRLS--INGKYAERDIVQFVPFRNFLQGTGDPGSARLR-LAKEVLAEVPDQLLSYMKVNNIPPQP 109
BLAST of mRNA_H-elongata_contig171748.4419.1 vs. uniprot
Match: UPI00093ECBAB (copine-8-like n=1 Tax=Meleagris gallopavo TaxID=9103 RepID=UPI00093ECBAB) HSP 1 Score: 90.9 bits (224), Expect = 3.200e-21 Identity = 49/92 (53.26%), Postives = 64/92 (69.57%), Query Frame = 1
Query: 22 AASAPLSIVIVGVGNGDFTAMEQLDGDRNRLQDPFTGRVASRDMVQFVPFRDFSDYGSA---AQHALARHVLAEIPGQFIAYMEANATYPPP 288
AA P+SI+IVGVG +F AM +LDGD R+ G+VA RD+VQFVPFRD++D G + + LA+ VLAEIP QFI+YM+A+ P P
Sbjct: 23 AAKLPMSIIIVGVGQAEFDAMVELDGDDIRISS--RGKVAERDIVQFVPFRDYTDRGGSQVLSMARLAKDVLAEIPEQFISYMKAHGIKPQP 112
BLAST of mRNA_H-elongata_contig171748.4419.1 vs. uniprot
Match: A0A444SD06_ARMVU (GTPase Era, mitochondrial n=1 Tax=Armadillidium vulgare TaxID=13347 RepID=A0A444SD06_ARMVU) HSP 1 Score: 92.8 bits (229), Expect = 5.040e-21 Identity = 53/96 (55.21%), Postives = 66/96 (68.75%), Query Frame = 1
Query: 13 IVDAASAPLSIVIVGVGNGDFTAMEQLDGDRNRLQDPFTGRVASRDMVQFVPFRDF----SDYGSAAQHALARHVLAEIPGQFIAYMEANATYPPP 288
IV A++ PLSI+IVGVGN DF AME+LDGD R+ G+ A RD+VQFVPFR+F D GSA Q LA+ VLAE+P Q ++YM+ N P P
Sbjct: 104 IVKASNLPLSIIIVGVGNADFNAMEELDGDVIRVSS--NGKYAERDIVQFVPFRNFLRKKGDRGSARQR-LAKEVLAEVPDQLLSYMKVNNIPPQP 196
BLAST of mRNA_H-elongata_contig171748.4419.1 vs. uniprot
Match: A0A6F9BWG6_9TELE (C2 domain-containing protein n=1 Tax=Coregonus sp. 'balchen' TaxID=861768 RepID=A0A6F9BWG6_9TELE) HSP 1 Score: 95.9 bits (237), Expect = 6.630e-21 Identity = 51/95 (53.68%), Postives = 66/95 (69.47%), Query Frame = 1
Query: 1 TIATIVDAASAPLSIVIVGVGNGDFTAMEQLDGDRNRLQDPFTGRVASRDMVQFVPFRDFSDYGSAAQHALARHVLAEIPGQFIAYMEANATYPP 285
T + IV+A+ P+SI+I+GVG DFTAME LDGD RL+ P TG A+RD+VQFVPFR F + + + ALA+ VLAE+PGQ + Y N PP
Sbjct: 315 TRSAIVNASRLPMSIIIIGVGGADFTAMEFLDGDDGRLRAP-TGETAARDIVQFVPFRQFQN---SPKEALAQSVLAEVPGQVVTYFNMNKLSPP 405
BLAST of mRNA_H-elongata_contig171748.4419.1 vs. uniprot
Match: A0A4W5M6V9_9TELE (Copine III n=1 Tax=Hucho hucho TaxID=62062 RepID=A0A4W5M6V9_9TELE) HSP 1 Score: 95.1 bits (235), Expect = 7.330e-21 Identity = 51/95 (53.68%), Postives = 67/95 (70.53%), Query Frame = 1
Query: 1 TIATIVDAASAPLSIVIVGVGNGDFTAMEQLDGDRNRLQDPFTGRVASRDMVQFVPFRDFSDYGSAAQHALARHVLAEIPGQFIAYMEANATYPP 285
T + IV+A+ P+SI+I+GVG DFTAME LDGD RL+ P TG A+RD+VQFVPFR F + A + ALA+ VLAE+PGQ ++Y + PP
Sbjct: 258 TRSAIVNASRLPMSIIIIGVGGADFTAMEFLDGDDGRLRAP-TGETAARDIVQFVPFRQFQN---APREALAQSVLAELPGQVVSYFSIHKLKPP 348 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig171748.4419.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig171748.4419.1 >prot_H-elongata_contig171748.4419.1 ID=prot_H-elongata_contig171748.4419.1|Name=mRNA_H-elongata_contig171748.4419.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=117bp TIATIVDAASAPLSIVIVGVGNGDFTAMEQLDGDRNRLQDPFTGRVASRDback to top mRNA from alignment at H-elongata_contig171748:433..1354+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig171748.4419.1 ID=mRNA_H-elongata_contig171748.4419.1|Name=mRNA_H-elongata_contig171748.4419.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=922bp|location=Sequence derived from alignment at H-elongata_contig171748:433..1354+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig171748:433..1354+ >mRNA_H-elongata_contig171748.4419.1 ID=mRNA_H-elongata_contig171748.4419.1|Name=mRNA_H-elongata_contig171748.4419.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=702bp|location=Sequence derived from alignment at H-elongata_contig171748:433..1354+ (Himanthalia elongata Himel1 dioecious)back to top |