mRNA_H-elongata_contig168676.4276.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig168676.4276.1 vs. uniprot
Match: D8LRX3_ECTSI (PCI domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRX3_ECTSI) HSP 1 Score: 360 bits (923), Expect = 6.330e-122 Identity = 181/198 (91.41%), Postives = 190/198 (95.96%), Query Frame = 1
Query: 1 QVKAGLEAAKKLIDLGGDWDRRNRLKVYEALHLVTARDVKGAASLLLECVSTFTCTELCSYNDFILYTVVTNVLALPRTTLKKKIVDGPEVLAVINDIPNISALVNSLYDCRYHDFMSAIVELNEQLEEDRYFATHSTYLVRELRILAYTQFLDAYKSVVIATMATAFGVGEAFLDRELSRFIAAGRLNAKIDKVGTV 594
QVKAGLEAAKK+IDLGGDWDRRNRLKVYEALHL+T+RD+KGAA+LLLECVSTFTCTELCSYNDFILYTVVTN+L LPRTTLKKKIVDGPEVLAVIN+IPNISALVNSLYDCRY DFM AIVELN QLE DRYFATHSTYLVRELRILAYTQFLDAYKSVV+ TMATAFGVGE FLD+ELSRFIAAGRLNAKIDKVG V
Sbjct: 182 QVKAGLEAAKKMIDLGGDWDRRNRLKVYEALHLITSRDIKGAATLLLECVSTFTCTELCSYNDFILYTVVTNILTLPRTTLKKKIVDGPEVLAVINEIPNISALVNSLYDCRYRDFMMAIVELNGQLENDRYFATHSTYLVRELRILAYTQFLDAYKSVVLGTMATAFGVGEPFLDKELSRFIAAGRLNAKIDKVGGV 379
BLAST of mRNA_H-elongata_contig168676.4276.1 vs. uniprot
Match: A0A835Z177_9STRA (26S proteasome subunit RPN7-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z177_9STRA) HSP 1 Score: 281 bits (718), Expect = 5.190e-91 Identity = 141/197 (71.57%), Postives = 166/197 (84.26%), Query Frame = 1
Query: 4 VKAGLEAAKKLIDLGGDWDRRNRLKVYEALHLVTARDVKGAASLLLECVSTFTCTELCSYNDFILYTVVTNVLALPRTTLKKKIVDGPEVLAVINDIPNISALVNSLYDCRYHDFMSAIVELNEQLEEDRYFATHSTYLVRELRILAYTQFLDAYKSVVIATMATAFGVGEAFLDRELSRFIAAGRLNAKIDKVGTV 594
VK L +AKKL++ GGDWDRRNRLKVYEA +LV ARD+KGAA+LLLECV+TFTCTELCSY +FI VVTNVL LPRT LKKKIVDGPEVL V+ +P++ ALV SLY+C Y FM+A+VE+NEQL DRYFA H+ Y+V+ELRILAY Q+L+AY+SVV+A+MA AFGVG FLD ELSRFIAA RLNA+IDKVG V
Sbjct: 173 VKEALASAKKLVEAGGDWDRRNRLKVYEAFYLVLARDMKGAAALLLECVATFTCTELCSYEEFIFVAVVTNVLCLPRTDLKKKIVDGPEVLGVLPSLPHLQALVASLYNCDYRGFMAAMVEVNEQLLSDRYFAQHARYMVKELRILAYAQYLEAYRSVVLASMARAFGVGVDFLDAELSRFIAAARLNAQIDKVGGV 369
BLAST of mRNA_H-elongata_contig168676.4276.1 vs. uniprot
Match: A0A4D9CYL3_9STRA (PCI domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYL3_9STRA) HSP 1 Score: 247 bits (630), Expect = 1.270e-77 Identity = 122/197 (61.93%), Postives = 152/197 (77.16%), Query Frame = 1
Query: 4 VKAGLEAAKKLIDLGGDWDRRNRLKVYEALHLVTARDVKGAASLLLECVSTFTCTELCSYNDFILYTVVTNVLALPRTTLKKKIVDGPEVLAVINDIPNISALVNSLYDCRYHDFMSAIVELNEQLEEDRYFATHSTYLVRELRILAYTQFLDAYKSVVIATMATAFGVGEAFLDRELSRFIAAGRLNAKIDKVGTV 594
K LE AKKL++ GGDWDRRNRLKVYEA+ L+T R +K AA LLL+C++TFTC EL +Y FI Y V+TN+L L RT LKKK+VDGPEV+AV+ + P + L+NSLYDC Y F A+VE+ +L DRY + H LVRE+R+L Y+QFL++YKSV +A+MA AFG+ FLDRELSRFIAAGRL+AKIDKVG V
Sbjct: 182 TKENLERAKKLVEDGGDWDRRNRLKVYEAVALITTRSLKKAAELLLDCIATFTCVELTTYEQFIFYAVITNLLYLERTKLKKKLVDGPEVIAVLREKPALGRLLNSLYDCDYRAFFQALVEVTPELTRDRYMSPHLRLLVREMRVLVYSQFLESYKSVRVASMADAFGISVDFLDRELSRFIAAGRLSAKIDKVGGV 378
BLAST of mRNA_H-elongata_contig168676.4276.1 vs. uniprot
Match: A0A7R9YET5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YET5_9STRA) HSP 1 Score: 247 bits (630), Expect = 1.590e-77 Identity = 124/197 (62.94%), Postives = 155/197 (78.68%), Query Frame = 1
Query: 4 VKAGLEAAKKLIDLGGDWDRRNRLKVYEALHLVTARDVKGAASLLLECVSTFTCTELCSYNDFILYTVVTNVLALPRTTLKKKIVDGPEVLAVINDIPNISALVNSLYDCRYHDFMSAIVELNEQLEEDRYFATHSTYLVRELRILAYTQFLDAYKSVVIATMATAFGVGEAFLDRELSRFIAAGRLNAKIDKVGTV 594
V LE A L++ GGDWDRRNRLKVY+ALHL+TARD++ AA+LLLECV TFT TELC+YN+F+ YTVV N L LPR KK I+DGPEVLAVIND+P + L +SL+ C F +AIVELN +L ++RYFA H+ +LVRELR+ AY QFL+AYKSV + +MAT FGVG FLD +L+RFIAAGR++A+ID+V V
Sbjct: 184 VAENLEKAHALVEDGGDWDRRNRLKVYQALHLITARDLEAAAALLLECVQTFTATELCTYNEFVFYTVVANTLHLPRPQYKKDIIDGPEVLAVINDLPPLPELSSSLHSCDAKVFFNAIVELNTELLKNRYFAQHAKFLVRELRVKAYKQFLEAYKSVRLDSMATVFGVGVDFLDADLARFIAAGRISARIDRVSGV 380
BLAST of mRNA_H-elongata_contig168676.4276.1 vs. uniprot
Match: A0A7S2B949_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B949_9STRA) HSP 1 Score: 244 bits (622), Expect = 1.870e-76 Identity = 126/193 (65.28%), Postives = 147/193 (76.17%), Query Frame = 1
Query: 16 LEAAKKLIDLGGDWDRRNRLKVYEALHLVTARDVKGAASLLLECVSTFTCTELCSYNDFILYTVVTNVLALPRTTLKKKIVDGPEVLAVIN--DIPNISALVNSLYDCRYHDFMSAIVELNEQLEEDRYFATHSTYLVRELRILAYTQFLDAYKSVVIATMATAFGVGEAFLDRELSRFIAAGRLNAKIDKVG 588
L +AKKL++ GGDWDRRNRLKVYEA+ + RD K AA LLL+ V+TFTCTELCSY FI Y V+TNVL L R LKKKIVDGPEVL VI+ + + LVN LYDC Y F +A+V LN L DRY A H+ YL+RE RIL Y+Q+LDAYKSV++ TMA AFGVG+ FLD+ELSRFIA RLNAKIDKVG
Sbjct: 181 LRSAKKLVEDGGDWDRRNRLKVYEAVFFMIERDFKSAAELLLDGVATFTCTELCSYESFIFYAVLTNVLYLKRPELKKKIVDGPEVLGVIHLPQLDPLPILVNGLYDCEYAGFFNALVTLNTNLLRDRYIARHARYLIREYRILVYSQYLDAYKSVMLGTMANAFGVGQPFLDQELSRFIATSRLNAKIDKVG 373
BLAST of mRNA_H-elongata_contig168676.4276.1 vs. uniprot
Match: A0A7R9WGW2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WGW2_9STRA) HSP 1 Score: 241 bits (616), Expect = 3.300e-75 Identity = 118/190 (62.11%), Postives = 147/190 (77.37%), Query Frame = 1
Query: 25 AKKLIDLGGDWDRRNRLKVYEALHLVTARDVKGAASLLLECVSTFTCTELCSYNDFILYTVVTNVLALPRTTLKKKIVDGPEVLAVINDIPNISALVNSLYDCRYHDFMSAIVELNEQLEEDRYFATHSTYLVRELRILAYTQFLDAYKSVVIATMATAFGVGEAFLDRELSRFIAAGRLNAKIDKVGTV 594
A KL GGDWDRRNRLKVY AL + ARD+K AASLL++C++TF+C ELCSY DFI+YT++TN+L LPRT LK+KI+DGPE+L+V NDIP + LVN+LYDC Y ++ A+VEL L DR+ HS Y++REL +L Y QFLD+YKSV + MA +FGVG +LD +LSRFIAAGRL AKIDK G V
Sbjct: 215 ASKLAQDGGDWDRRNRLKVYTALSKILARDIKTAASLLVDCIATFSCNELCSYTDFIVYTIITNILHLPRTELKEKIIDGPEILSVSNDIPVVCRLVNTLYDCDYKGYLQAMVELRAILVADRFLQPHSGYIMRELHVLGYKQFLDSYKSVTLDNMAHSFGVGTEYLDLQLSRFIAAGRLAAKIDKFGGV 404
BLAST of mRNA_H-elongata_contig168676.4276.1 vs. uniprot
Match: A0A482S2Z4_9ARCH (PCI domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2Z4_9ARCH) HSP 1 Score: 236 bits (602), Expect = 1.020e-74 Identity = 111/198 (56.06%), Postives = 153/198 (77.27%), Query Frame = 1
Query: 1 QVKAGLEAAKKLIDLGGDWDRRNRLKVYEALHLVTARDVKGAASLLLECVSTFTCTELCSYNDFILYTVVTNVLALPRTTLKKKIVDGPEVLAVINDIPNISALVNSLYDCRYHDFMSAIVELNEQLEEDRYFATHSTYLVRELRILAYTQFLDAYKSVVIATMATAFGVGEAFLDRELSRFIAAGRLNAKIDKVGTV 594
++ A + AKKL + GGDWDRRNRLK+YEA +L+ R+VK AA LLL+CV+TFTCTELC+Y F+ Y +VT+++ L R L+KK++ P V+ +I ++PN LV S+Y+C Y F AIV ++++L+E+R+ A STYLVRE R+LAY+QFL+AYKSV++++MA +FG+ LD ELSRFIAAGRLNAKIDKVG +
Sbjct: 77 KLNASINEAKKLNETGGDWDRRNRLKIYEAFYLLHTREVKEAAKLLLDCVATFTCTELCTYTQFMFYVLVTSIITLDRNYLRKKVIKDPNVITLIRELPNAQKLVQSIYNCNYAAFFQAIVPIHDELQENRFLAPLSTYLVREYRVLAYSQFLEAYKSVMLSSMAASFGITVTLLDSELSRFIAAGRLNAKIDKVGDI 274
BLAST of mRNA_H-elongata_contig168676.4276.1 vs. uniprot
Match: A0A6S9I8K8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9I8K8_9STRA) HSP 1 Score: 238 bits (607), Expect = 8.250e-74 Identity = 115/193 (59.59%), Postives = 151/193 (78.24%), Query Frame = 1
Query: 16 LEAAKKLIDLGGDWDRRNRLKVYEALHLVTARDVKGAASLLLECVSTFTCTELCSYNDFILYTVVTNVLALPRTTLKKKIVDGPEVLAVINDIPNISALVNSLYDCRYHDFMSAIVELNEQLEEDRYFATHSTYLVRELRILAYTQFLDAYKSVVIATMATAFGVGEAFLDRELSRFIAAGRLNAKIDKVGTV 594
++ A K+ GGDWDRRNRLKVY AL + ARDVK A++LL++C++TF+CTELCSY DFI+YT+++ VL LPRT LKK I+DGPE+L+V DIP ++ALVN+LYDC Y ++ A+V++ L DR+ HS Y++REL +L Y QFLD+YKSV + +MA++FGV AFLD +LSRFIAAGRL AKIDK G V
Sbjct: 216 IDRAAKMAADGGDWDRRNRLKVYSALSKLLARDVKEASTLLVDCIATFSCTELCSYTDFIVYTMISGVLYLPRTELKKMIIDGPEILSVAKDIPAVNALVNALYDCDYKGYLHAMVDVQPVLVADRFLQPHSGYIMRELHVLGYKQFLDSYKSVTLESMASSFGVSTAFLDMQLSRFIAAGRLTAKIDKFGGV 408
BLAST of mRNA_H-elongata_contig168676.4276.1 vs. uniprot
Match: A0A7S4JB96_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JB96_9STRA) HSP 1 Score: 238 bits (606), Expect = 1.050e-73 Identity = 117/190 (61.58%), Postives = 147/190 (77.37%), Query Frame = 1
Query: 25 AKKLIDLGGDWDRRNRLKVYEALHLVTARDVKGAASLLLECVSTFTCTELCSYNDFILYTVVTNVLALPRTTLKKKIVDGPEVLAVINDIPNISALVNSLYDCRYHDFMSAIVELNEQLEEDRYFATHSTYLVRELRILAYTQFLDAYKSVVIATMATAFGVGEAFLDRELSRFIAAGRLNAKIDKVGTV 594
A K+ GGDWDRRNRLKVY AL V ARD+K AASLL++C++TF+C EL SY DFI+YT+VTN+L LPRT LK+KI+DGPE+L+V N+IP + LVN+LYDC Y ++ A+VEL L DR+ HS Y++REL +L Y QFLD+YKSV + +MA +FGVG +LD +LSRFIAAGRL AKIDK G V
Sbjct: 215 ASKIAQDGGDWDRRNRLKVYTALSKVLARDIKTAASLLVDCIATFSCNELSSYTDFIVYTIVTNILHLPRTELKEKIIDGPEILSVSNEIPVVCRLVNTLYDCDYKGYLQAMVELRAILVADRFLQPHSGYIMRELHVLGYKQFLDSYKSVTLESMANSFGVGTEYLDLQLSRFIAAGRLAAKIDKFGGV 404
BLAST of mRNA_H-elongata_contig168676.4276.1 vs. uniprot
Match: A0A7S4A7V7_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7V7_9STRA) HSP 1 Score: 235 bits (599), Expect = 3.280e-73 Identity = 113/197 (57.36%), Postives = 149/197 (75.63%), Query Frame = 1
Query: 4 VKAGLEAAKKLIDLGGDWDRRNRLKVYEALHLVTARDVKGAASLLLECVSTFTCTELCSYNDFILYTVVTNVLALPRTTLKKKIVDGPEVLAVINDIPNISALVNSLYDCRYHDFMSAIVELNEQLEEDRYFATHSTYLVRELRILAYTQFLDAYKSVVIATMATAFGVGEAFLDRELSRFIAAGRLNAKIDKVGTV 594
K LE A++L GGDWDR NRL YE+ +L+ RD+KGAA LL V+TFTC ELC+Y +F+ Y VVTNVLALPR LKK+I+D PEVL VI IP++S LV SLY+C Y + ++++E+ + L +DRYF+ H+ Y++RELR+L YTQFLDAYK+V +++MA AFGV F+D EL+RFI+ GRLNAK+DKV V
Sbjct: 161 AKKQLEDARRLAADGGDWDRNNRLSAYESAYLIVTRDLKGAAKKLLGGVATFTCVELCTYPEFVFYAVVTNVLALPRPDLKKRIIDSPEVLQVIKQIPHLSTLVESLYNCEYSVYFASLLEIEKVLLDDRYFSQHTRYVIRELRVLVYTQFLDAYKTVTLSSMAAAFGVSVEFIDGELARFISCGRLNAKVDKVDNV 357 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig168676.4276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig168676.4276.1 >prot_H-elongata_contig168676.4276.1 ID=prot_H-elongata_contig168676.4276.1|Name=mRNA_H-elongata_contig168676.4276.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=198bp QVKAGLEAAKKLIDLGGDWDRRNRLKVYEALHLVTARDVKGAASLLLECVback to top mRNA from alignment at H-elongata_contig168676:432..1274- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig168676.4276.1 ID=mRNA_H-elongata_contig168676.4276.1|Name=mRNA_H-elongata_contig168676.4276.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=843bp|location=Sequence derived from alignment at H-elongata_contig168676:432..1274- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig168676:432..1274- >mRNA_H-elongata_contig168676.4276.1 ID=mRNA_H-elongata_contig168676.4276.1|Name=mRNA_H-elongata_contig168676.4276.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1188bp|location=Sequence derived from alignment at H-elongata_contig168676:432..1274- (Himanthalia elongata Himel1 dioecious)back to top |