prot_H-elongata_contig168676.4276.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig168676.4276.1
Unique Nameprot_H-elongata_contig168676.4276.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length198
Homology
BLAST of mRNA_H-elongata_contig168676.4276.1 vs. uniprot
Match: D8LRX3_ECTSI (PCI domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRX3_ECTSI)

HSP 1 Score: 360 bits (923), Expect = 6.330e-122
Identity = 181/198 (91.41%), Postives = 190/198 (95.96%), Query Frame = 0
Query:    1 QVKAGLEAAKKLIDLGGDWDRRNRLKVYEALHLVTARDVKGAASLLLECVSTFTCTELCSYNDFILYTVVTNVLALPRTTLKKKIVDGPEVLAVINDIPNISALVNSLYDCRYHDFMSAIVELNEQLEEDRYFATHSTYLVRELRILAYTQFLDAYKSVVIATMATAFGVGEAFLDRELSRFIAAGRLNAKIDKVGTV 198
            QVKAGLEAAKK+IDLGGDWDRRNRLKVYEALHL+T+RD+KGAA+LLLECVSTFTCTELCSYNDFILYTVVTN+L LPRTTLKKKIVDGPEVLAVIN+IPNISALVNSLYDCRY DFM AIVELN QLE DRYFATHSTYLVRELRILAYTQFLDAYKSVV+ TMATAFGVGE FLD+ELSRFIAAGRLNAKIDKVG V
Sbjct:  182 QVKAGLEAAKKMIDLGGDWDRRNRLKVYEALHLITSRDIKGAATLLLECVSTFTCTELCSYNDFILYTVVTNILTLPRTTLKKKIVDGPEVLAVINEIPNISALVNSLYDCRYRDFMMAIVELNGQLENDRYFATHSTYLVRELRILAYTQFLDAYKSVVLGTMATAFGVGEPFLDKELSRFIAAGRLNAKIDKVGGV 379          
BLAST of mRNA_H-elongata_contig168676.4276.1 vs. uniprot
Match: A0A835Z177_9STRA (26S proteasome subunit RPN7-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z177_9STRA)

HSP 1 Score: 281 bits (718), Expect = 5.190e-91
Identity = 141/197 (71.57%), Postives = 166/197 (84.26%), Query Frame = 0
Query:    2 VKAGLEAAKKLIDLGGDWDRRNRLKVYEALHLVTARDVKGAASLLLECVSTFTCTELCSYNDFILYTVVTNVLALPRTTLKKKIVDGPEVLAVINDIPNISALVNSLYDCRYHDFMSAIVELNEQLEEDRYFATHSTYLVRELRILAYTQFLDAYKSVVIATMATAFGVGEAFLDRELSRFIAAGRLNAKIDKVGTV 198
            VK  L +AKKL++ GGDWDRRNRLKVYEA +LV ARD+KGAA+LLLECV+TFTCTELCSY +FI   VVTNVL LPRT LKKKIVDGPEVL V+  +P++ ALV SLY+C Y  FM+A+VE+NEQL  DRYFA H+ Y+V+ELRILAY Q+L+AY+SVV+A+MA AFGVG  FLD ELSRFIAA RLNA+IDKVG V
Sbjct:  173 VKEALASAKKLVEAGGDWDRRNRLKVYEAFYLVLARDMKGAAALLLECVATFTCTELCSYEEFIFVAVVTNVLCLPRTDLKKKIVDGPEVLGVLPSLPHLQALVASLYNCDYRGFMAAMVEVNEQLLSDRYFAQHARYMVKELRILAYAQYLEAYRSVVLASMARAFGVGVDFLDAELSRFIAAARLNAQIDKVGGV 369          
BLAST of mRNA_H-elongata_contig168676.4276.1 vs. uniprot
Match: A0A4D9CYL3_9STRA (PCI domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYL3_9STRA)

HSP 1 Score: 247 bits (630), Expect = 1.270e-77
Identity = 122/197 (61.93%), Postives = 152/197 (77.16%), Query Frame = 0
Query:    2 VKAGLEAAKKLIDLGGDWDRRNRLKVYEALHLVTARDVKGAASLLLECVSTFTCTELCSYNDFILYTVVTNVLALPRTTLKKKIVDGPEVLAVINDIPNISALVNSLYDCRYHDFMSAIVELNEQLEEDRYFATHSTYLVRELRILAYTQFLDAYKSVVIATMATAFGVGEAFLDRELSRFIAAGRLNAKIDKVGTV 198
             K  LE AKKL++ GGDWDRRNRLKVYEA+ L+T R +K AA LLL+C++TFTC EL +Y  FI Y V+TN+L L RT LKKK+VDGPEV+AV+ + P +  L+NSLYDC Y  F  A+VE+  +L  DRY + H   LVRE+R+L Y+QFL++YKSV +A+MA AFG+   FLDRELSRFIAAGRL+AKIDKVG V
Sbjct:  182 TKENLERAKKLVEDGGDWDRRNRLKVYEAVALITTRSLKKAAELLLDCIATFTCVELTTYEQFIFYAVITNLLYLERTKLKKKLVDGPEVIAVLREKPALGRLLNSLYDCDYRAFFQALVEVTPELTRDRYMSPHLRLLVREMRVLVYSQFLESYKSVRVASMADAFGISVDFLDRELSRFIAAGRLSAKIDKVGGV 378          
BLAST of mRNA_H-elongata_contig168676.4276.1 vs. uniprot
Match: A0A7R9YET5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YET5_9STRA)

HSP 1 Score: 247 bits (630), Expect = 1.590e-77
Identity = 124/197 (62.94%), Postives = 155/197 (78.68%), Query Frame = 0
Query:    2 VKAGLEAAKKLIDLGGDWDRRNRLKVYEALHLVTARDVKGAASLLLECVSTFTCTELCSYNDFILYTVVTNVLALPRTTLKKKIVDGPEVLAVINDIPNISALVNSLYDCRYHDFMSAIVELNEQLEEDRYFATHSTYLVRELRILAYTQFLDAYKSVVIATMATAFGVGEAFLDRELSRFIAAGRLNAKIDKVGTV 198
            V   LE A  L++ GGDWDRRNRLKVY+ALHL+TARD++ AA+LLLECV TFT TELC+YN+F+ YTVV N L LPR   KK I+DGPEVLAVIND+P +  L +SL+ C    F +AIVELN +L ++RYFA H+ +LVRELR+ AY QFL+AYKSV + +MAT FGVG  FLD +L+RFIAAGR++A+ID+V  V
Sbjct:  184 VAENLEKAHALVEDGGDWDRRNRLKVYQALHLITARDLEAAAALLLECVQTFTATELCTYNEFVFYTVVANTLHLPRPQYKKDIIDGPEVLAVINDLPPLPELSSSLHSCDAKVFFNAIVELNTELLKNRYFAQHAKFLVRELRVKAYKQFLEAYKSVRLDSMATVFGVGVDFLDADLARFIAAGRISARIDRVSGV 380          
BLAST of mRNA_H-elongata_contig168676.4276.1 vs. uniprot
Match: A0A7S2B949_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B949_9STRA)

HSP 1 Score: 244 bits (622), Expect = 1.870e-76
Identity = 126/193 (65.28%), Postives = 147/193 (76.17%), Query Frame = 0
Query:    6 LEAAKKLIDLGGDWDRRNRLKVYEALHLVTARDVKGAASLLLECVSTFTCTELCSYNDFILYTVVTNVLALPRTTLKKKIVDGPEVLAVIN--DIPNISALVNSLYDCRYHDFMSAIVELNEQLEEDRYFATHSTYLVRELRILAYTQFLDAYKSVVIATMATAFGVGEAFLDRELSRFIAAGRLNAKIDKVG 196
            L +AKKL++ GGDWDRRNRLKVYEA+  +  RD K AA LLL+ V+TFTCTELCSY  FI Y V+TNVL L R  LKKKIVDGPEVL VI+   +  +  LVN LYDC Y  F +A+V LN  L  DRY A H+ YL+RE RIL Y+Q+LDAYKSV++ TMA AFGVG+ FLD+ELSRFIA  RLNAKIDKVG
Sbjct:  181 LRSAKKLVEDGGDWDRRNRLKVYEAVFFMIERDFKSAAELLLDGVATFTCTELCSYESFIFYAVLTNVLYLKRPELKKKIVDGPEVLGVIHLPQLDPLPILVNGLYDCEYAGFFNALVTLNTNLLRDRYIARHARYLIREYRILVYSQYLDAYKSVMLGTMANAFGVGQPFLDQELSRFIATSRLNAKIDKVG 373          
BLAST of mRNA_H-elongata_contig168676.4276.1 vs. uniprot
Match: A0A7R9WGW2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WGW2_9STRA)

HSP 1 Score: 241 bits (616), Expect = 3.300e-75
Identity = 118/190 (62.11%), Postives = 147/190 (77.37%), Query Frame = 0
Query:    9 AKKLIDLGGDWDRRNRLKVYEALHLVTARDVKGAASLLLECVSTFTCTELCSYNDFILYTVVTNVLALPRTTLKKKIVDGPEVLAVINDIPNISALVNSLYDCRYHDFMSAIVELNEQLEEDRYFATHSTYLVRELRILAYTQFLDAYKSVVIATMATAFGVGEAFLDRELSRFIAAGRLNAKIDKVGTV 198
            A KL   GGDWDRRNRLKVY AL  + ARD+K AASLL++C++TF+C ELCSY DFI+YT++TN+L LPRT LK+KI+DGPE+L+V NDIP +  LVN+LYDC Y  ++ A+VEL   L  DR+   HS Y++REL +L Y QFLD+YKSV +  MA +FGVG  +LD +LSRFIAAGRL AKIDK G V
Sbjct:  215 ASKLAQDGGDWDRRNRLKVYTALSKILARDIKTAASLLVDCIATFSCNELCSYTDFIVYTIITNILHLPRTELKEKIIDGPEILSVSNDIPVVCRLVNTLYDCDYKGYLQAMVELRAILVADRFLQPHSGYIMRELHVLGYKQFLDSYKSVTLDNMAHSFGVGTEYLDLQLSRFIAAGRLAAKIDKFGGV 404          
BLAST of mRNA_H-elongata_contig168676.4276.1 vs. uniprot
Match: A0A482S2Z4_9ARCH (PCI domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2Z4_9ARCH)

HSP 1 Score: 236 bits (602), Expect = 1.020e-74
Identity = 111/198 (56.06%), Postives = 153/198 (77.27%), Query Frame = 0
Query:    1 QVKAGLEAAKKLIDLGGDWDRRNRLKVYEALHLVTARDVKGAASLLLECVSTFTCTELCSYNDFILYTVVTNVLALPRTTLKKKIVDGPEVLAVINDIPNISALVNSLYDCRYHDFMSAIVELNEQLEEDRYFATHSTYLVRELRILAYTQFLDAYKSVVIATMATAFGVGEAFLDRELSRFIAAGRLNAKIDKVGTV 198
            ++ A +  AKKL + GGDWDRRNRLK+YEA +L+  R+VK AA LLL+CV+TFTCTELC+Y  F+ Y +VT+++ L R  L+KK++  P V+ +I ++PN   LV S+Y+C Y  F  AIV ++++L+E+R+ A  STYLVRE R+LAY+QFL+AYKSV++++MA +FG+    LD ELSRFIAAGRLNAKIDKVG +
Sbjct:   77 KLNASINEAKKLNETGGDWDRRNRLKIYEAFYLLHTREVKEAAKLLLDCVATFTCTELCTYTQFMFYVLVTSIITLDRNYLRKKVIKDPNVITLIRELPNAQKLVQSIYNCNYAAFFQAIVPIHDELQENRFLAPLSTYLVREYRVLAYSQFLEAYKSVMLSSMAASFGITVTLLDSELSRFIAAGRLNAKIDKVGDI 274          
BLAST of mRNA_H-elongata_contig168676.4276.1 vs. uniprot
Match: A0A6S9I8K8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9I8K8_9STRA)

HSP 1 Score: 238 bits (607), Expect = 8.250e-74
Identity = 115/193 (59.59%), Postives = 151/193 (78.24%), Query Frame = 0
Query:    6 LEAAKKLIDLGGDWDRRNRLKVYEALHLVTARDVKGAASLLLECVSTFTCTELCSYNDFILYTVVTNVLALPRTTLKKKIVDGPEVLAVINDIPNISALVNSLYDCRYHDFMSAIVELNEQLEEDRYFATHSTYLVRELRILAYTQFLDAYKSVVIATMATAFGVGEAFLDRELSRFIAAGRLNAKIDKVGTV 198
            ++ A K+   GGDWDRRNRLKVY AL  + ARDVK A++LL++C++TF+CTELCSY DFI+YT+++ VL LPRT LKK I+DGPE+L+V  DIP ++ALVN+LYDC Y  ++ A+V++   L  DR+   HS Y++REL +L Y QFLD+YKSV + +MA++FGV  AFLD +LSRFIAAGRL AKIDK G V
Sbjct:  216 IDRAAKMAADGGDWDRRNRLKVYSALSKLLARDVKEASTLLVDCIATFSCTELCSYTDFIVYTMISGVLYLPRTELKKMIIDGPEILSVAKDIPAVNALVNALYDCDYKGYLHAMVDVQPVLVADRFLQPHSGYIMRELHVLGYKQFLDSYKSVTLESMASSFGVSTAFLDMQLSRFIAAGRLTAKIDKFGGV 408          
BLAST of mRNA_H-elongata_contig168676.4276.1 vs. uniprot
Match: A0A7S4JB96_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JB96_9STRA)

HSP 1 Score: 238 bits (606), Expect = 1.050e-73
Identity = 117/190 (61.58%), Postives = 147/190 (77.37%), Query Frame = 0
Query:    9 AKKLIDLGGDWDRRNRLKVYEALHLVTARDVKGAASLLLECVSTFTCTELCSYNDFILYTVVTNVLALPRTTLKKKIVDGPEVLAVINDIPNISALVNSLYDCRYHDFMSAIVELNEQLEEDRYFATHSTYLVRELRILAYTQFLDAYKSVVIATMATAFGVGEAFLDRELSRFIAAGRLNAKIDKVGTV 198
            A K+   GGDWDRRNRLKVY AL  V ARD+K AASLL++C++TF+C EL SY DFI+YT+VTN+L LPRT LK+KI+DGPE+L+V N+IP +  LVN+LYDC Y  ++ A+VEL   L  DR+   HS Y++REL +L Y QFLD+YKSV + +MA +FGVG  +LD +LSRFIAAGRL AKIDK G V
Sbjct:  215 ASKIAQDGGDWDRRNRLKVYTALSKVLARDIKTAASLLVDCIATFSCNELSSYTDFIVYTIVTNILHLPRTELKEKIIDGPEILSVSNEIPVVCRLVNTLYDCDYKGYLQAMVELRAILVADRFLQPHSGYIMRELHVLGYKQFLDSYKSVTLESMANSFGVGTEYLDLQLSRFIAAGRLAAKIDKFGGV 404          
BLAST of mRNA_H-elongata_contig168676.4276.1 vs. uniprot
Match: A0A7S4A7V7_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7V7_9STRA)

HSP 1 Score: 235 bits (599), Expect = 3.280e-73
Identity = 113/197 (57.36%), Postives = 149/197 (75.63%), Query Frame = 0
Query:    2 VKAGLEAAKKLIDLGGDWDRRNRLKVYEALHLVTARDVKGAASLLLECVSTFTCTELCSYNDFILYTVVTNVLALPRTTLKKKIVDGPEVLAVINDIPNISALVNSLYDCRYHDFMSAIVELNEQLEEDRYFATHSTYLVRELRILAYTQFLDAYKSVVIATMATAFGVGEAFLDRELSRFIAAGRLNAKIDKVGTV 198
             K  LE A++L   GGDWDR NRL  YE+ +L+  RD+KGAA  LL  V+TFTC ELC+Y +F+ Y VVTNVLALPR  LKK+I+D PEVL VI  IP++S LV SLY+C Y  + ++++E+ + L +DRYF+ H+ Y++RELR+L YTQFLDAYK+V +++MA AFGV   F+D EL+RFI+ GRLNAK+DKV  V
Sbjct:  161 AKKQLEDARRLAADGGDWDRNNRLSAYESAYLIVTRDLKGAAKKLLGGVATFTCVELCTYPEFVFYAVVTNVLALPRPDLKKRIIDSPEVLQVIKQIPHLSTLVESLYNCEYSVYFASLLEIEKVLLDDRYFSQHTRYVIRELRVLVYTQFLDAYKTVTLSSMAAAFGVSVEFIDGELARFISCGRLNAKVDKVDNV 357          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig168676.4276.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRX3_ECTSI6.330e-12291.41PCI domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835Z177_9STRA5.190e-9171.5726S proteasome subunit RPN7-domain-containing prot... [more]
A0A4D9CYL3_9STRA1.270e-7761.93PCI domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7R9YET5_9STRA1.590e-7762.94Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2B949_9STRA1.870e-7665.28Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7R9WGW2_9STRA3.300e-7562.11Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A482S2Z4_9ARCH1.020e-7456.06PCI domain-containing protein n=1 Tax=archaeon Tax... [more]
A0A6S9I8K8_9STRA8.250e-7459.59Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4JB96_9STRA1.050e-7361.58Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S4A7V7_9STRA3.280e-7357.36Hypothetical protein n=3 Tax=Pelagomonas calceolat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR01958526S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit 1PFAMPF10602RPN7coord: 2..84
e-value: 6.3E-26
score: 91.1
IPR000717Proteasome component (PCI) domainPFAMPF01399PCIcoord: 99..195
e-value: 7.1E-13
score: 49.0
IPR000717Proteasome component (PCI) domainPROSITEPS50250PCIcoord: 38..198
score: 19.345
NoneNo IPR availableGENE3D1.25.40.570coord: 2..154
e-value: 3.5E-19
score: 71.2
NoneNo IPR availablePANTHERPTHR1414526S PROTESOME SUBUNIT 6coord: 2..197
IPR03526826S Proteasome non-ATPase regulatory subunit 6PANTHERPTHR14145:SF126S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 6coord: 2..197
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 130..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig168676contigH-elongata_contig168676:432..1274 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig168676.4276.1mRNA_H-elongata_contig168676.4276.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig168676 432..1274 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig168676.4276.1 ID=prot_H-elongata_contig168676.4276.1|Name=mRNA_H-elongata_contig168676.4276.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=198bp
QVKAGLEAAKKLIDLGGDWDRRNRLKVYEALHLVTARDVKGAASLLLECV
STFTCTELCSYNDFILYTVVTNVLALPRTTLKKKIVDGPEVLAVINDIPN
ISALVNSLYDCRYHDFMSAIVELNEQLEEDRYFATHSTYLVRELRILAYT
QFLDAYKSVVIATMATAFGVGEAFLDRELSRFIAAGRLNAKIDKVGTV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019585Rpn7/CSN1
IPR000717PCI_dom
IPR035268PSMD6
IPR036390WH_DNA-bd_sf