mRNA_H-elongata_contig16752.4212.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig16752.4212.1
Unique NamemRNA_H-elongata_contig16752.4212.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig16752.4212.1 vs. uniprot
Match: D8LDP1_ECTSI (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDP1_ECTSI)

HSP 1 Score: 383 bits (984), Expect = 3.260e-125
Identity = 196/250 (78.40%), Postives = 214/250 (85.60%), Query Frame = 1
Query:    1 RCYEAEESIRQETRLWDEKKKATQVMRVKEGESDYRYFPEPDIPPLVLSEELIQRWRSELCELPAGKRERYQSELGLSESEAEALSDDQYVALYFEEAVAAGSDSKEACKWLTGDIAGYLKSEKSSIEGVALKPSGLAELVRLVKEKKISGRIAKELLPALLG-EWRGGVWEFVEKEGMQAINDPSEIEAFVRDVMMANADKVEQYRNGKGKLAGFFVGQAVERSGGKADPETTQDVARRMLDDVAIEVG 747
            RCYE +E IRQETRLWDEKKKATQ+MRVKEGE+DYRYFPEPDIPPL L  EL+QRWRSELCELPAGKRERYQSELGLSE +A ALSDDQ VALYFEEAV AGSD  EACKWL GDIAGYL S+K  I  + L PSGLAELV L++E+KISGRIAKELLP LLG EW GGV E VE+ GMQAINDP+EIE FVRDVM ANADKVEQ+R+GK KL GFFVGQAV  SGGKADPE T +VARR+L+DV +E G
Sbjct:  329 RCYETDEVIRQETRLWDEKKKATQIMRVKEGEADYRYFPEPDIPPLALPAELLQRWRSELCELPAGKRERYQSELGLSEEDASALSDDQSVALYFEEAVGAGSDPGEACKWLIGDIAGYLNSKKKGIREIGLTPSGLAELVGLIRERKISGRIAKELLPELLGGEWEGGVEELVEERGMQAINDPAEIEGFVRDVMKANADKVEQFRSGKTKLQGFFVGQAVALSGGKADPELTGEVARRLLEDVGVEAG 578          
BLAST of mRNA_H-elongata_contig16752.4212.1 vs. uniprot
Match: A0A836CP17_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP17_9STRA)

HSP 1 Score: 278 bits (711), Expect = 1.440e-84
Identity = 146/243 (60.08%), Postives = 180/243 (74.07%), Query Frame = 1
Query:    1 RCYEAEESIRQETRLWDEKKKATQVMRVKEGESDYRYFPEPDIPPLVLSEELIQRWRSELCELPAGKRERYQSELGLSESEAEALSDDQYVALYFEEAVAAGSDSKEACKWLTGDIAGYLKSEKSSIEGVALKPSGLAELVRLVKEKKISGRIAKELLPALL-GEWRGGVWEFVEKEGMQAINDPSEIEAFVRDVMMANADKVEQYRNGKGKLAGFFVGQAVERSGGKADPETTQDVARRMLD 726
            +CYE  E+IRQETRLWDEK+K T++MRVKEGESDYRYFPEPDIPPL L   +I  WR+ELCELPA KR RY+SE  LSE++AE ++DDQ VA YFE A+AAG+D  EA KW+ GDIA Y+     +I  + L P  LAE+V L++  +I+G+IAKELLP LL G   GGV   V++ GM+ I D + IE  VR+VM  NADKVEQYR GK +LAGFFVGQ++  SG +ADP T Q V + MLD
Sbjct:  320 KCYETGETIRQETRLWDEKEKVTKIMRVKEGESDYRYFPEPDIPPLRLPRAVIDGWRAELCELPAEKRARYRSEYKLSEADAETITDDQTVAAYFEAAIAAGADPSEAAKWILGDIAAYVNKAAVAITDIGLTPPLLAEMVTLIQGGRITGKIAKELLPELLEGGCEGGVAAVVKERGMEVITDVTVIEGVVREVMEKNADKVEQYRGGKAQLAGFFVGQSMALSGSRADPGTLQRVVKAMLD 562          
BLAST of mRNA_H-elongata_contig16752.4212.1 vs. uniprot
Match: A0A6H5JQ32_9PHAE (GatB_Yqey domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ32_9PHAE)

HSP 1 Score: 257 bits (657), Expect = 1.100e-79
Identity = 144/250 (57.60%), Postives = 160/250 (64.00%), Query Frame = 1
Query:    1 RCYEAEESIRQETRLWDEKKKATQVMRVKEGESDYRYFPEPDIPPLVLSEELIQRWRSELCELPAGKRERYQSELGLSESEAEALSDDQYVALYFEEAVAAGSDSKEACKWLTGDIAGYLKSEKSSIEGVALKPSGLAELVRLVKEKKISGRIAKELLPALLG-EWRGGVWEFVEKEGMQAINDPSEIEAFVRDVMMANADKVEQYRNGKGKLAGFFVGQAVERSGGKADPETTQDVARRMLDDVAIEVG 747
            RCYE +E IRQETRLWDEKKKATQ+MRVKEGE+DYRYFPEPDIPPL L  EL QRWRSELCELP                                                              I  + L PSGLAELV L++E+ ISGRIAKELLP LLG EW GGV E V++ GMQAINDP+EIE FVRDVM ANADKVEQ+R+GK KL GFFVGQAV  SGGKADPE T +VARR+L+DV +E G
Sbjct:  118 RCYETDEIIRQETRLWDEKKKATQIMRVKEGEADYRYFPEPDIPPLALPAELRQRWRSELCELPG-------------------------------------------------------------IREIGLTPSGLAELVGLIRERNISGRIAKELLPELLGGEWEGGVEELVQERGMQAINDPAEIEVFVRDVMEANADKVEQFRSGKTKLQGFFVGQAVALSGGKADPELTGEVARRLLEDVGVEDG 306          
BLAST of mRNA_H-elongata_contig16752.4212.1 vs. uniprot
Match: A0A7S3Y3T3_HETAK (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3T3_HETAK)

HSP 1 Score: 263 bits (671), Expect = 1.990e-76
Identity = 134/256 (52.34%), Postives = 173/256 (67.58%), Query Frame = 1
Query:    4 CYEAEESIRQETRLWDEKKKATQVMRVKEGESDYRYFPEPDIPPLVLSEELIQRWRSELCELPAGKRERYQSELGLSESEAEALSDDQYVALYFEEAVAAGSDS---KEACKWLTGDIAGYLKSEKSSIEGVALKPSGLAELVRLVKEKKISGRIAKELLPALLGEWRGGVWEFVEKEGMQAINDPSEIEAFVRDVMMANADKVEQYRNGKGKLAGFFVGQAVERSGGKADPETTQDVARRMLDDVAIEVGT*PRA 762
             YEA E +RQETRLWDEK+  +++MRVKEGE+DYRYFPEPDIPPL L  +L+  W++ L ELPA KR RY  +LGL   +A  L+DDQ  A YFE AVAAG       E CKWL GD+AG+L   + +     L+P+GLA++V L+  ++I+G+IAK+LLP LL  W G   E V   GM+AINDP+ I   V  +   N DKVE YR GK KLAGFF+GQA+ +SGG+ADPET+Q +   +LD+  +     P A
Sbjct:  305 AYEAGEGVRQETRLWDEKELVSKIMRVKEGEADYRYFPEPDIPPLRLDADLLSAWKAALVELPAAKRARYVRDLGLDAEQARVLTDDQQTAAYFEAAVAAGGAGCAPVEVCKWLIGDVAGHLAKTRRAAAEAKLRPAGLAQMVELIAARRITGKIAKDLLPDLLDSWEGTPAELVAARGMEAINDPAAIREIVLRIFAENQDKVEAYRGGKTKLAGFFLGQAMTQSGGRADPETSQRITMELLDNPELVAAAAPAA 560          
BLAST of mRNA_H-elongata_contig16752.4212.1 vs. uniprot
Match: F4XIA3_9CYAN (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=25 Tax=Cyanobacteria TaxID=1117 RepID=F4XIA3_9CYAN)

HSP 1 Score: 250 bits (638), Expect = 1.620e-74
Identity = 128/240 (53.33%), Postives = 174/240 (72.50%), Query Frame = 1
Query:    4 CYEAEESIRQETRLWDEKKKATQVMRVKEGESDYRYFPEPDIPPLVLSEELIQRWRSELCELPAGKRERYQSELGLSESEAEALSDDQYVALYFEEAVAAGSDSKEACKWLTGDIAGYLKSEKSSIEGVALKPSGLAELVRLVKEKKISGRIAKELLPALLGEWRGGVWEFVEKEGMQAINDPSEIEAFVRDVMMANADKVEQYRNGKGKLAGFFVGQAVERSGGKADPETTQDVARRML 723
              EA +SI QETRLW+E  + T  MR KEG SDYRYFPEPD+PP+ +S E +++WRSEL ELPA KR RY+SELGLS  +A  L+DD+ VA YFE +VAA ++ K+A  W+ GDIA YLK+EK +I  +ALKP+ LAEL+ L+ +  ISG+IAKE+LP LL +  G   E VE++G+  I+DP ++   + +V+ AN  K+EQYRNGK KL GFFVGQ ++++ G+ADP+ T  +  + L
Sbjct:  254 AVEAGKSIIQETRLWEEGSQRTISMRTKEGSSDYRYFPEPDLPPIEVSTEQLEQWRSELAELPAQKRHRYESELGLSAYDARVLTDDRQVAEYFETSVAANANPKQAANWVMGDIAAYLKTEKLAITEIALKPNTLAELINLIDDDTISGKIAKEILPELLSQG-GSARELVERKGLIKISDPDQLSTIIDEVLAANPKKLEQYRNGKTKLQGFFVGQVMKKTSGRADPKLTNQILGKKL 492          
BLAST of mRNA_H-elongata_contig16752.4212.1 vs. uniprot
Match: K9WKR9_9CYAN (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=4 Tax=Oscillatoriales TaxID=1150 RepID=K9WKR9_9CYAN)

HSP 1 Score: 247 bits (630), Expect = 2.420e-73
Identity = 128/241 (53.11%), Postives = 176/241 (73.03%), Query Frame = 1
Query:    4 CYEAEESIRQETRLWDEKKKATQVMRVKEGESDYRYFPEPDIPPLVLSEELIQRWRSELCELPAGKRERYQSELGLSESEAEALSDDQYVALYFEEAVAAGSDSKEACKWLTGDIAGYLKSEKSSIEGVALKPSGLAELVRLVKEKKISGRIAKELLPALLGEWRGGVWEFVEKEGMQAINDPSEIEAFVRDVMMANADKVEQYRNGKGKLAGFFVGQAVERSGGKADPETTQDVARRMLD 726
              EA E I QETRLW+E  + T  MRVKEG SDYRYFPEPD+PP+ +S+E +++W SEL ELPA KR RY+SELGLS  +A  L+DD+ VA YFE AVA G+++K+   W+ GDIA YL +EK +I  +ALKP+ LAEL+ L+++  ISG+IAKE+LP LL +  G   E VE++G+  I+D S++EA + +V+ AN  ++EQYR GK KL GFFVGQ +++S G+ADP+ T  +  + L+
Sbjct:  254 AVEAGERIIQETRLWEEGSQRTISMRVKEGSSDYRYFPEPDLPPIEVSKEQLEQWGSELPELPAQKRHRYESELGLSAYDARVLTDDRQVAEYFEAAVATGANAKQTANWVMGDIAAYLNNEKVAIAEIALKPTTLAELINLIEDGTISGKIAKEILPELLAQG-GSAKELVERKGLIQISDTSQLEAIIDEVIAANPKELEQYRKGKTKLQGFFVGQVMKKSSGRADPKLTNQILGKKLN 493          
BLAST of mRNA_H-elongata_contig16752.4212.1 vs. uniprot
Match: A0A6B3MEY2_9CYAN (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=6 Tax=Cyanobacteria TaxID=1117 RepID=A0A6B3MEY2_9CYAN)

HSP 1 Score: 244 bits (624), Expect = 2.020e-72
Identity = 124/235 (52.77%), Postives = 174/235 (74.04%), Query Frame = 1
Query:   19 ESIRQETRLWDEKKKATQVMRVKEGESDYRYFPEPDIPPLVLSEELIQRWRSELCELPAGKRERYQSELGLSESEAEALSDDQYVALYFEEAVAAGSDSKEACKWLTGDIAGYLKSEKSSIEGVALKPSGLAELVRLVKEKKISGRIAKELLPALLGEWRGGVWEFVEKEGMQAINDPSEIEAFVRDVMMANADKVEQYRNGKGKLAGFFVGQAVERSGGKADPETTQDVARRML 723
            +SI QETRLW+E  + T  MR KEG SDYRYFPEPD+PP+ +S+EL+++WRS+L ELPA KR RY+ ELGLS  +A  L+DD+ VA YFE AV+AG++SK+A  W+ GDIA YL +EK  IE +ALKP  LAEL++L+++  ISG+IAKE+LP LL +  G   E VE +G+  I+D  ++E  + +++ A+  ++EQYRNGK KL GFFVGQ ++++ G+ADP+ T  +  + L
Sbjct:  261 DSIVQETRLWEEGSQRTISMRSKEGSSDYRYFPEPDLPPIEVSKELLEQWRSQLVELPAQKRSRYEQELGLSAYDARVLTDDRSVAEYFEAAVSAGANSKQAANWVMGDIAAYLNNEKLEIEQIALKPVVLAELIKLIEDGTISGKIAKEILPELLSQG-GSAKELVESKGLIQISDKGQLEVIIDEIISAHPKELEQYRNGKTKLQGFFVGQVMKKTSGRADPKLTNQILGKKL 494          
BLAST of mRNA_H-elongata_contig16752.4212.1 vs. uniprot
Match: U5DM23_9CHRO (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Rubidibacter lacunae KORDI 51-2 TaxID=582515 RepID=U5DM23_9CHRO)

HSP 1 Score: 244 bits (623), Expect = 2.840e-72
Identity = 130/241 (53.94%), Postives = 170/241 (70.54%), Query Frame = 1
Query:    1 RCYEAEESIRQETRLWDEKKKATQVMRVKEGESDYRYFPEPDIPPLVLSEELIQRWRSELCELPAGKRERYQSELGLSESEAEALSDDQYVALYFEEAVAAGSDSKEACKWLTGDIAGYLKSEKSSIEGVALKPSGLAELVRLVKEKKISGRIAKELLPALLGEWRGGVWEFVEKEGMQAINDPSEIEAFVRDVMMANADKVEQYRNGKGKLAGFFVGQAVERSGGKADPETTQDVARRML 723
            +  E+ E I QETRLWDE K+ T  MR KEG SDYRYFPEPDIPPL ++ E +  W +EL ELPA KR+RY   LGLS  +A  L+DD+ VA YFE AVAAG+D+K+A  W+T D+A YL + K +I  +AL P+ LAELV+L+ +  ISG+IAKE+LP LL E  G   + VE +G+  I+DPSE+E  V +++ AN DKVEQ+RNGK KL GFFVGQ ++ +GG+ADP+    +    L
Sbjct:  254 KAIESGEDIVQETRLWDEGKQRTTSMRKKEGSSDYRYFPEPDIPPLEITTEQLDTWTAELPELPAKKRDRYAKSLGLSVYDARVLTDDRLVAEYFETAVAAGADAKQAANWVTQDVAAYLNNNKLAIADIALTPATLAELVQLIAKGTISGKIAKEILPELLTEG-GSAEKLVESKGLTQISDPSELERVVDELLAANPDKVEQFRNGKTKLQGFFVGQMMKATGGRADPKLANKILTAKL 493          
BLAST of mRNA_H-elongata_contig16752.4212.1 vs. uniprot
Match: W7U0I3_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0I3_9STRA)

HSP 1 Score: 242 bits (617), Expect = 3.510e-72
Identity = 133/253 (52.57%), Postives = 176/253 (69.57%), Query Frame = 1
Query:    1 RCYEAEESIRQETRLWDEKKKATQVMRVKEGESDYRYFPEPDIPPLVLSEELIQRWRSELCELPAGKRERYQSELGLSESEAEA---LSDDQYVALYFEEAVAA-GSDSKEACKWLTGDIAGYLKSEKSSIEG---VALKPSGLAELVRLVKEKKISGRIAKELLPALLGEWRGG----VWEFVEKEGMQAINDPSEIEAFVRDVMMANADKVEQYRNGKGKLAGFFVGQAVERSGGKADPETTQDVARRMLD 726
            R Y+A E++RQETR+WDEK+ A+++MRVKEGESDYRYFPEPD+PPL L+  ++Q WR+ L ELPA KR RYQ   GL+  +AE    L+DD  VA +FE AV   G++ KEA KWL GDIAG+L   K  ++    + L P+GLAELV L+ + KI+G+IAKELLP LL EW GG    V + V+  G++AI DP+ I A V+ V+ AN +KVE +R GK KL GFFVG  ++ SG +A+PE  Q +    L+
Sbjct:  174 RAYDAGEAVRQETRMWDEKELASKLMRVKEGESDYRYFPEPDVPPLALASSVVQAWRATLQELPAAKRARYQDPAGLN-LDAETTKFLTDDLAVARFFEAAVEQHGAEPKEAAKWLVGDIAGHLNGNKGRVKEFGKIKLTPAGLAELVGLIGQGKITGKIAKELLPELLDEWEGGEEGAVLDLVQARGLEAITDPAVIAALVQKVLEANPEKVEDFRGGKTKLLGFFVGMVLKESGSRANPEVVQSLTVEALN 425          
BLAST of mRNA_H-elongata_contig16752.4212.1 vs. uniprot
Match: A0A6J4HVZ3_9CYAN (Aspartyl-tRNA(Asn) amidotransferase subunit B @ Glutamyl-tRNA(Gln) amidotransferase subunit B n=1 Tax=uncultured Coleofasciculus sp. TaxID=1267456 RepID=A0A6J4HVZ3_9CYAN)

HSP 1 Score: 236 bits (602), Expect = 3.630e-71
Identity = 123/241 (51.04%), Postives = 171/241 (70.95%), Query Frame = 1
Query:    4 CYEAEESIRQETRLWDEKKKATQVMRVKEGESDYRYFPEPDIPPLVLSEELIQRWRSELCELPAGKRERYQSELGLSESEAEALSDDQYVALYFEEAVAAGSDSKEACKWLTGDIAGYLKSEKSSIEGVALKPSGLAELVRLVKEKKISGRIAKELLPALLGEWRGGVWEFVEKEGMQAINDPSEIEAFVRDVMMANADKVEQYRNGKGKLAGFFVGQAVERSGGKADPETTQDVARRMLD 726
              EA E I QETRLW+E  + T  MRVKEG SDYRYFPEPD+PP+ +S E ++ WR+ L ELPA KR RY+ ELGLS  +A  L+DD+ VA YFE+A+A  ++ K+   W+ GDIA YL +EK  I  +AL P  LAEL+ L+++  ISG+IAK++LP LL +  G V E VE++G+  I+D +E+EA + +V+ AN  ++EQYRNGK KL GFFVGQ ++++ G+ADP+ T  +  + L+
Sbjct:   89 AVEAGERIIQETRLWEEGSQRTISMRVKEGSSDYRYFPEPDLPPIEVSIEQLEEWRATLPELPAQKRHRYEGELGLSAYDARVLTDDRLVAEYFEKAIATAANPKQTANWVMGDIAAYLNNEKLLITQIALTPEVLAELITLIEDGTISGKIAKDILPELLTQG-GSVKELVERKGLIQISDTAELEAMIDEVIAANPKELEQYRNGKTKLQGFFVGQVMKKTNGRADPKLTNQILGKKLN 328          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16752.4212.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDP1_ECTSI3.260e-12578.40Glutamyl-tRNA(Gln) amidotransferase subunit B, mit... [more]
A0A836CP17_9STRA1.440e-8460.08Glutamyl-tRNA(Gln) amidotransferase subunit B, mit... [more]
A0A6H5JQ32_9PHAE1.100e-7957.60GatB_Yqey domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S3Y3T3_HETAK1.990e-7652.34Glutamyl-tRNA(Gln) amidotransferase subunit B, mit... [more]
F4XIA3_9CYAN1.620e-7453.33Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
K9WKR9_9CYAN2.420e-7353.11Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
A0A6B3MEY2_9CYAN2.020e-7252.77Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
U5DM23_9CHRO2.840e-7253.94Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
W7U0I3_9STRA3.510e-7252.57Glutamyl-tRNA(Gln) amidotransferase subunit B, mit... [more]
A0A6J4HVZ3_9CYAN3.630e-7151.04Aspartyl-tRNA(Asn) amidotransferase subunit B @ Gl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16752contigH-elongata_contig16752:3891..6992 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score346.7
Seed ortholog evalue8.4e-93
Seed eggNOG ortholog2880.D8LDP1
Preferred nameGATB
KEGG rclassRC00010
KEGG koko:K02434
KEGG ReactionR03905,R04212
KEGG Pathwayko00970,ko01100,map00970,map01100
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564
EggNOG free text desc.Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln)
EggNOG OGsCOG0064@1,KOG2438@2759
Ec32 ortholog descriptionglutamyl-tRNA(Gln) amidotransferase, B subunit
Ec32 orthologEc-19_001400.1
EC6.3.5.6,6.3.5.7
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03029
Hectar predicted targeting categoryother localisation
Exons5
Model size1271
Cds size678
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929977.5921142-UTR-H-elongata_contig16752:3890..44081622929977.5921142-UTR-H-elongata_contig16752:3890..4408Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16752 3891..4408 -
1691679232.000813-UTR-H-elongata_contig16752:3890..44081691679232.000813-UTR-H-elongata_contig16752:3890..4408Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16752 3891..4408 -
1622929977.6811717-UTR-H-elongata_contig16752:6917..69921622929977.6811717-UTR-H-elongata_contig16752:6917..6992Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16752 6918..6992 -
1691679232.0598614-UTR-H-elongata_contig16752:6917..69921691679232.0598614-UTR-H-elongata_contig16752:6917..6992Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16752 6918..6992 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929977.60948-CDS-H-elongata_contig16752:4408..45861622929977.60948-CDS-H-elongata_contig16752:4408..4586Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16752 4409..4586 -
1691679232.0138054-CDS-H-elongata_contig16752:4408..45861691679232.0138054-CDS-H-elongata_contig16752:4408..4586Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16752 4409..4586 -
1622929977.6260796-CDS-H-elongata_contig16752:5345..55551622929977.6260796-CDS-H-elongata_contig16752:5345..5555Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16752 5346..5555 -
1691679232.023048-CDS-H-elongata_contig16752:5345..55551691679232.023048-CDS-H-elongata_contig16752:5345..5555Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16752 5346..5555 -
1622929977.641022-CDS-H-elongata_contig16752:5984..61561622929977.641022-CDS-H-elongata_contig16752:5984..6156Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16752 5985..6156 -
1691679232.0327024-CDS-H-elongata_contig16752:5984..61561691679232.0327024-CDS-H-elongata_contig16752:5984..6156Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16752 5985..6156 -
1622929977.654943-CDS-H-elongata_contig16752:6456..65581622929977.654943-CDS-H-elongata_contig16752:6456..6558Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16752 6457..6558 -
1691679232.0423436-CDS-H-elongata_contig16752:6456..65581691679232.0423436-CDS-H-elongata_contig16752:6456..6558Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16752 6457..6558 -
1622929977.669023-CDS-H-elongata_contig16752:6901..69171622929977.669023-CDS-H-elongata_contig16752:6901..6917Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16752 6902..6917 -
1691679232.0497203-CDS-H-elongata_contig16752:6901..69171691679232.0497203-CDS-H-elongata_contig16752:6901..6917Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16752 6902..6917 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16752.4212.1prot_H-elongata_contig16752.4212.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig16752 4409..6917 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig16752.4212.1

>prot_H-elongata_contig16752.4212.1 ID=prot_H-elongata_contig16752.4212.1|Name=mRNA_H-elongata_contig16752.4212.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=226bp
MRVKEGESDYRYFPEPDIPPLVLSEELIQRWRSELCELPAGKRERYQSEL
GLSESEAEALSDDQYVALYFEEAVAAGSDSKEACKWLTGDIAGYLKSEKS
SIEGVALKPSGLAELVRLVKEKKISGRIAKELLPALLGEWRGGVWEFVEK
EGMQAINDPSEIEAFVRDVMMANADKVEQYRNGKGKLAGFFVGQAVERSG
GKADPETTQDVARRMLDDVAIEVGT*
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mRNA from alignment at H-elongata_contig16752:3891..6992-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig16752.4212.1 ID=mRNA_H-elongata_contig16752.4212.1|Name=mRNA_H-elongata_contig16752.4212.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3102bp|location=Sequence derived from alignment at H-elongata_contig16752:3891..6992- (Himanthalia elongata Himel1 dioecious)
AGGTGCTATGAAGCCGAAGAGTCCATCCGGCAAGAGACGAGACTGTGGGA TGAGAAGAAAAAGGCCACCCAGGTCATGCGCGTCAAGGAGGGTGAGCGCT CTCTCTCTATGCATATAGATATCTTTGTCTATCTAGTGCATGTATGTCTG TCTGGATTTCGGTTATTGTTTAACCATCATCTCAATATATAGACTAGTCT ATCTCTATTTCTATTGATATTAAATCTAGCTATACCTAGATATATTCGTA TTAATACTAGATTTAGATATGTGTGTCTCTCTTATGTGTAATATATCGAG ATCGATGGATAAAATCTGATTTCTCCCTCTCTTGTATGTAGTGTAGTATA TATCCAATCAGCCCATAGTACATAATATCTATACATAGATATGTTAACCA ATTTATCTATCTTTCGATCTGTCTTCTTCTCCAGGCGAATCCGATTATCG CTACTTCCCCGAGCCGGACATACCGCCGCTCGTGCTCTCGGAGGAGTTGA TACAAAGGTGGCGGTCGGAACTGTGCGAATTACCCGGTACGATTTTCCCA TTATACCGCACCCCTCGTGGAATGCCGTCCCAGTTATAACCGTTCTTGCT ATCTCTTGCGGTGAGACTTGAGCCTGCCGTGTTACTCTTCAGACTTTATT TATTTATTTATTTCACCGTCGCATCCCCTTGCGCGTGGCCTCTGGCCGGC AGCTCCACTTCCATATGCTGGAGTTACACCTCCCTGAACGCCCCGGCCCC CTCTATGAACAGAAAAGATCGCGGTGACCGACCTCCCTCACTTGTCGCTA TCTCTCTCTCCTTACCTCCGAAACGTCTAAATATAGCCGGTAAACGTGAG CGCTACCAGTCGGAGCTGGGACTGTCGGAATCTGAAGCGGAGGCCCTCTC GGACGACCAATATGTGGCTCTGTACTTCGAGGAAGCGGTGGCCGCGGGGT CGGATTCTAAGGAGGCTTGCAAGTGGTTGACGGGCGATATCGCTGGATAT CTCAAAAGGTGAGAGAGAAAAAGAAAGTCCGTATTTTCCTTCCCCGTCTC CGTCATCTTCCCCACAGCGACGCTCGTCTGCCGATATCCTGCTTGTGCGT TGGTCATATTGAATAGTTACGACAACAAAATTTTCATGCAGAAGGCACAA AGCGTGAAGCTCCCCTGGAGCACGTCCGCGCCCTTCTATCGCCCAGCATG GTTGTAGAGGAACAAGTTGCACACGAGGGTTGTCACAGCCCCCCCACTCC GCCCCGCCCTTTCGAGAAACACCTCACCCCCCACTCATACAGAGGCAAGC GGTATATCGCTCCTCCTCCCCATTGCCTCTGTAAAGCAGTTACTCTCGTG TCGTGGCCTTCGGCGCAGTAACCTTCTATGCACGCATAAGTCAGTGTGAG ATCGATAATATGCTGATGTTTCTTACGCATCGATCAGCGAAAAAAGCAGC ATCGAGGGCGTTGCGCTCAAGCCTTCGGGGCTCGCGGAGCTGGTGCGCCT CGTGAAGGAGAAGAAAATATCTGGCCGCATCGCCAAGGAGCTGCTCCCGG CGCTCTTGGGAGAATGGCGGGGGGGTGTCTGGGAGTTCGTAGAGAAGGAA GGAATGCAGGCCATCAACGACCCATCAGAGATCGAGGCGTTTGTGAGGTA CGCAGTCAATTGAAGGGGGAAAAGGGGAAGATAAAAAATATATATTTTAG ATGAAAACACAAACAAGCGCTGGTTATCATTAGACTATAGTTTTGTTTTC ATCTCGACGATGGCGAGGAACGGGGTTACGGACAGGCAACAATTATATGT TGGTGCGTCGTTGCATTCCAGCGTACCTTGCCGCGCCTTCAGGCCGACCG ATGAGTAGGTCGGGATGAAATTGGATCCATTGGGATGCGATGAAATTCTG CGTGATGAACCTCTATAGACAAGATGGGGGAAAAAACCCCGAGAGCCGTT CGAGGGACGGAAAACGTGCTCATCCAAAGCTTTTATGAAATGTGAAAGAG GTCTTGCTCTGTGATACCACGTCGAAGAACTCCTGTATGGTGTACCTCGC GTGTTTGTTCCATCTTGTCTTTGGCCAGCACGCGACGAGCGTTGATTTTT GGTTTTTGGTTTTATGCTTCGTATTAATCATTACTTTTATATTATAGCCT TGTTTATTTTGTTTTTATATTGTTTTTGAGTGTCGTTGGATATATATATA TATATATTGTTTTGTAACATCTCGTATTTGCCTCACGTTTTCCCTGTCCG GCATTCGCGAAGCGGTTTGGCATCCGCGTATAGGAGGTGTTGAGCCTGGC CAATAAATGTGAAGACCCCCCCCCCAACCCGCCCTCGAGACCTTTGAAAC GTACTGGCGACAATAAATGAAGTTGTTGTTGGCTCTCTTCCTTCTGCCAT CAACAGGGACGTGATGATGGCGAACGCGGACAAAGTGGAGCAGTACCGCA ACGGCAAGGGCAAGCTGGCGGGTTTCTTCGTCGGACAAGCCGTAGAACGA TCGGGTGGGAAGGCCGACCCTGAGACGACCCAAGACGTCGCGCGGAGAAT GCTGGACGACGTTGCGATCGAGGTTGGGACGTAGCCCCGGGCTGTGAAGC GGCGACGGCGCCACTGCCGCCGAGGGCCTCGAGGAGTTGCTCTCCGCTGC GGATGCTGTCGCGCAATGTTTTGCCTAGTAGGCGTTACCCAGAGCGGCGC GTCGTGGTCATCGTAGCTGAATAAACGGAGACTTTTCGTGGTCGGCGCGA ACTCGGTGACACATAGCCGACATGTTATTGGCGCCGGGGATTTGACGCCT CAAAAAGAGAAACAACTGCTAGCACACATCCCTCGGCCAATCCTGTGTAT GAGCGTAGGTGCTAGTGATACTCGGAGGGTAACGCTATCGGCAGAACCGA ATAGGAAACCCTGAGAGTATATCAAAGAGGCCGGCCAACGAAAGAGGGGC GTGGTGGAGGTGGATGAGGAATTAGTGTAGTGCGCTTTAGGAAATGTCCC CGGCTTGATCAGGGCGTTCGCCAAGTACTATTACCACTACTATTATTACT ACTATTACTGCTATTACGGAGGCTCATAATAATGAGACGCATTTTTACGC TC
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Coding sequence (CDS) from alignment at H-elongata_contig16752:3891..6992-

>mRNA_H-elongata_contig16752.4212.1 ID=mRNA_H-elongata_contig16752.4212.1|Name=mRNA_H-elongata_contig16752.4212.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1356bp|location=Sequence derived from alignment at H-elongata_contig16752:3891..6992- (Himanthalia elongata Himel1 dioecious)
ATGCGCGTCAAGGAGGATGCGCGTCAAGGAGGGCGAATCCGATTATCGCT
ACTTCCCCGAGCCGGACATACCGCCGCTCGTGCTCTCGGAGGAGTTGATA
CAAAGGTGGCGGTCGGAACTGTGCGAATTACCCGGCGAATCCGATTATCG
CTACTTCCCCGAGCCGGACATACCGCCGCTCGTGCTCTCGGAGGAGTTGA
TACAAAGGTGGCGGTCGGAACTGTGCGAATTACCCGCCGGTAAACGTGAG
CGCTACCAGTCGGAGCTGGGACTGTCGGAATCTGAAGCGGAGGCCCTCTC
GGACGACCAATATGTGGCTCTGTACTTCGAGGAAGCGGTGGCCGCGGGGT
CGGATTCTAAGGAGGCTTGCAAGTGGTTGACGGGCGATATCGCTGGATAT
CTCAAAAGCCGGTAAACGTGAGCGCTACCAGTCGGAGCTGGGACTGTCGG
AATCTGAAGCGGAGGCCCTCTCGGACGACCAATATGTGGCTCTGTACTTC
GAGGAAGCGGTGGCCGCGGGGTCGGATTCTAAGGAGGCTTGCAAGTGGTT
GACGGGCGATATCGCTGGATATCTCAAAAGCGAAAAAAGCAGCATCGAGG
GCGTTGCGCTCAAGCCTTCGGGGCTCGCGGAGCTGGTGCGCCTCGTGAAG
GAGAAGAAAATATCTGGCCGCATCGCCAAGGAGCTGCTCCCGGCGCTCTT
GGGAGAATGGCGGGGGGGTGTCTGGGAGTTCGTAGAGAAGGAAGGAATGC
AGGCCATCAACGACCCATCAGAGATCGAGGCGTTTGTGAGCGAAAAAAGC
AGCATCGAGGGCGTTGCGCTCAAGCCTTCGGGGCTCGCGGAGCTGGTGCG
CCTCGTGAAGGAGAAGAAAATATCTGGCCGCATCGCCAAGGAGCTGCTCC
CGGCGCTCTTGGGAGAATGGCGGGGGGGTGTCTGGGAGTTCGTAGAGAAG
GAAGGAATGCAGGCCATCAACGACCCATCAGAGATCGAGGCGTTTGTGAG
GGACGTGATGATGGCGAACGCGGACAAAGTGGAGCAGTACCGCAACGGCA
AGGGCAAGCTGGCGGGTTTCTTCGTCGGACAAGCCGTAGAACGATCGGGT
GGGAAGGCCGACCCTGAGACGACCCAAGACGTCGCGCGGAGAATGCTGGA
CGACGTTGCGATCGAGGTTGGGACGTAGGGACGTGATGATGGCGAACGCG
GACAAAGTGGAGCAGTACCGCAACGGCAAGGGCAAGCTGGCGGGTTTCTT
CGTCGGACAAGCCGTAGAACGATCGGGTGGGAAGGCCGACCCTGAGACGA
CCCAAGACGTCGCGCGGAGAATGCTGGACGACGTTGCGATCGAGGTTGGG
ACGTAG
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