mRNA_H-elongata_contig16647.4173.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig16647.4173.1 vs. uniprot
Match: UPI001244D623 (uncharacterized protein LOC115964702 n=1 Tax=Quercus lobata TaxID=97700 RepID=UPI001244D623) HSP 1 Score: 80.9 bits (198), Expect = 2.130e-13 Identity = 84/311 (27.01%), Postives = 133/311 (42.77%), Query Frame = 1
Query: 19 CAAHAVDLLLKDFGNLDFFADTLKRINKVVKFVKNHHGTSAIHESHTNLR-LITPCATRFTTNVIVAMRMLKASVSSVSDYIRTATVAS---VRAAGREVVSEISAGDALVGEFWFEVNVFVQLMEPLSALLRMGDGE---SVTYAAEGEDWKDLDISTRMVAMKEKAA---KRLNYVW----NPMMSATFSLDPEYRNVNLLNTRNGQILKDLNTMFMRLLISHG-NDPVAAISAAEDEPEGGPVRKAGSQFTRFKSGKWHGADLLGYAKSMAPTDWWETYGVGMRELAELTVKVTSKVPASAGAECNWS 906
CAAH +DL+LKD G + A TL+R ++ ++ NH G + +TN R L+ TRF T+ + K S + + V S A + VV I L+ FW + +++M PL +L D E +++Y E D I KE+ + K ++ W +P+ + L+P+Y + N +I +L RL+ S D + + + EG G Q +R K+ APT+WW YG L +LT+K+ S ++ G E NWS
Sbjct: 64 CAAHCIDLILKDIGKIPRIAKTLERAIQLTGYIYNHGGVLKMMREYTNQRELVRTGKTRFCTSYLTIKSTFKQKHSLRAMFTSEEWVHSRWAKEANAKRVVEMI-----LMPSFWNTIVYILKVMGPLVRVLPSVDNERKPTMSYIYEAMDRAKEAIIKAFNENKERYSNIFKIIDERWECQLHPLHAVGHFLNPKYFYFDPNIVTNHEITAELYACIQRLVPSTKIQDKIMVELSMYKKAEG----LFGIQRSR---------------KTRAPTEWWSLYGSSTPNLQQLTIKILSLTCSACGCERNWS 350
BLAST of mRNA_H-elongata_contig16647.4173.1 vs. uniprot
Match: A0A843VI85_COLES (BED-type domain-containing protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843VI85_COLES) HSP 1 Score: 79.3 bits (194), Expect = 9.890e-13 Identity = 82/317 (25.87%), Postives = 124/317 (39.12%), Query Frame = 1
Query: 19 CAAHAVDLLLKDFGNLDFFADTLKRINKVVKFVKNHHGTSAIHESHTNLRLITPCATRFTTNVIVAM----------RMLKASVSSVSDYIRTATVASVRAAGREVVSEISAGDALVGEFWFEVNVFVQLMEPLSALLRMGDGE-----SVTYAA-EGEDWKDLDISTRMVAMKEKAAKRLNYVWNPMMS-----ATFSLDPEYRNVNLLNTRNGQILKDLNTMFMRLLISHGNDPVAAISAAEDEPEGGPVRKAGSQFTRFKSGKWHGADLLGYAKSMAPTDWWETYGVGMRELAELTVKVTSKVPASAGAECNWS 906
CAAH VDL+LK+ G L + K+ +F+ NHH A T L+ P TRF TN + RM + S++ T+ G+EV +++ + FW V VQ++EPL +LR+ DG+ + YA E K ++S R + ++ W+ MS A + L P Y + L + DL F R++ PV A A ++ TDWW +G L ++ VKV S+ +S+G E NWS
Sbjct: 445 CAAHCVDLMLKEIGTLQPVKMVVDAGQKITRFIYNHHLVLAWMRESTGGELLRPGVTRFATNFVALQSLLKHKDGLKRMFRGDKWLQSNFANTSD-------GKEVEGIVNSSN-----FWDRVFKLVQIIEPLYEVLRVVDGDRRPSIGLVYAKLEAARKKIREVSPRHAHL---VLDVVDDRWDRQMSRDLHMAAYYLHPAYHYAHELAYDD-----DLTAAFARVVERLSRSPVLAADAIDEA-----------------------------------TDWWFNFGHSAPTLRKIAVKVLSQTSSSSGCERNWS 706
BLAST of mRNA_H-elongata_contig16647.4173.1 vs. uniprot
Match: A0A151TGM2_CAJCA (Uncharacterized protein n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151TGM2_CAJCA) HSP 1 Score: 79.0 bits (193), Expect = 9.910e-13 Identity = 78/318 (24.53%), Postives = 143/318 (44.97%), Query Frame = 1
Query: 19 CAAHAVDLLLKDFGNLDFFADTLKRINKVVKFVKNHHGTSAIHESHTNL-RLITPCATRFTTNVIV--AMRMLKASVSSV--SDYIRTATVASVRAAGREVVSEISAGDALVGEFWFEVNVFVQLMEPLSALLRMGDGESVT---YAAEGEDWKDLDISTRMVAMK---EKAAKRLNYVWN-----PMMSATFSLDPEYRNVNLLNTRNGQILKDLNTMFMRLLISHGNDPVAAISAAEDEPEGGPVRKAGSQFTRFKSGKWHGADLLGYAKSMAPTD------WWETYGVGMRELAELTVKVTSKVPASAGAECNWS 906
CAAH +DL+L+D G L F +T+ K+ ++ H ++ ++N L P TRF T+ + ++ K ++ S+ S+ T+ AS ++ ++V++ + + D FW + ++ + PL +LR+ DG+S Y E D I+ + +K K ++ WN P+ +A + L+P Y N + ++L L F R++ P D+ Q +FK K ++ G ++A D WWE+YG +EL ++ +++ S ++ G E NWS
Sbjct: 138 CAAHCLDLILEDIGELPVFYNTIANAKKITTYIYRHTWVLNLYRQYSNGGELARPAVTRFATSYLTLNCIKQQKNALRSMFASEEWATSPHAS-KSEAKQVMNLVLSDD----RFWRSITYCLKCVIPLVKVLRLVDGDSKPASPYIYEAMDRAKEKIAQNFQMQESRYKKVWKIIDTRWNLQLHRPLHAAAYYLNPRYHYDKNFNP-DSEVLIGLYETFQRMV------PDIRTRVIIDQ-----------QLEKFKGAK----EIFGMDMAIATRDKKQPALWWESYGGRGKELQKVAMRILSLTCSATGCERNWS 428
BLAST of mRNA_H-elongata_contig16647.4173.1 vs. uniprot
Match: UPI0010A3540F (uncharacterized protein LOC114760313 n=3 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A3540F) HSP 1 Score: 78.2 bits (191), Expect = 2.000e-12 Identity = 83/328 (25.30%), Postives = 138/328 (42.07%), Query Frame = 1
Query: 19 CAAHAVDLLLKDFGNLDFFADTLKRINKVVKFVKNHHGTSAIHESHTNLR-LITPCATRFTTNVIVAMRMLKAS----VSSVSDYIRTATVASVRAAGREVVSEISAGDALVGEFWFEVNVFVQLMEPLSALLRMGDGES---VTYAAEGEDWKDLDISTRMVAMKEKAAKRLNYVWN------------PMMSATFSLDPEYRNVNLLNTRNGQILKDLNTMFMRLLISHGNDPVAAISAAEDEPEGGPVRKA----GSQFTRFKSGKWHGADLLGYAKSMA--------PTDWWETYGVGMRELAELTVKVTSKVPASAGAECNWS 906
CAAH +DL+L+D G L F +T+ K+ F+ H ++ ++ + L P TRF T + +L+ SD ++T AS ++ G++VV + GD+ FW + ++ + PL +LR+ DG+S + Y E D +I+ EK R +W P+ +A + L+P++ N + ++ L R++ P RK Q FKS K L G +SMA P WWE+YG +EL ++ +++ S ++ G E NWS
Sbjct: 327 CAAHCLDLILEDIGQLPVFYNTITNAKKITTFIYRHTWVLNLYRKYSKGKELARPAVTRFATAYLTLSCILRQKNALRTMFASDDWTSSTFAS-KSEGKQVVDMVF-GDS---RFWSSIKYCLKCVSPLVKVLRLVDGDSKPAMPYIYEAMDRAKEEIADNF----EKKESRYKKIWKIIDIRWTLQLHRPLHAAAYFLNPKFHYDEKFNA-DQEVYFGLYETIERMI---------------------PDRKTRFLVDQQLEAFKSAK----GLFG--RSMAIDTRNKKQPALWWESYGGEGKELQKIAMRILSLTCSAIGCERNWS 617
BLAST of mRNA_H-elongata_contig16647.4173.1 vs. uniprot
Match: UPI00098E0C6B (uncharacterized protein LOC109841094 n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E0C6B) HSP 1 Score: 77.8 bits (190), Expect = 2.530e-12 Identity = 76/314 (24.20%), Postives = 137/314 (43.63%), Query Frame = 1
Query: 19 CAAHAVDLLLKDFGNLDFFADTLKRINKVVKFVKNHHGTSAIHESHTNLR-LITPCATRFTTNVIVAMRMLKASVSSVSDYIRTATVASVRAAGREVVSEISAGDALVGEFWFEVNVFVQLMEPLSALLRMGDGE---SVTYAAEGEDW-KDL------DISTRMVAMKEKAAKRLNY-VWNPMMSATFSLDPEYRNVNLLNTRNGQILKDLNTMFMRLLISHGNDPVAAISAAEDEPEGGPVRKAGSQFTRFKSGKWHGADLLGYA------KSMAPTDWWETYGVGMRELAELTVKVTSKVPASAGAECNWS 906
CAAH ++L+LKD G L F TL R ++ F+ +H + N R L+ P TRF ++ + + K + + V + RA R+ + + + FW V ++L PL +L++ D E ++ + E D K+ D +++ + E KR N + +P+ +A F L+P + + + +I+K L + +L+ D ++ + T +K + DL G + +P DWW++YG L +LT+++ S +S+G E NWS
Sbjct: 138 CAAHCLNLILKDIGKLPFMKMTLSRAMELTGFIYSHGWVLRLMREQINARELLRPATTRFASSFLTLSSIHKQKNNLRKMFCSEKWVENKRA--RDPKGKAAERTVKMTNFWNNVVRVLKLTGPLVRVLKLVDNERKPTMEFIYEAMDRAKEAIAKAFGDDASKYSEVFEMIDKRWNVQLHHPLHAAGFYLNPIFFYAHPNIQADKEIMKGLWEVIQKLVPEQDQDKIS------------------QELTLYKEAQ----DLFGMPIAIRNREKKSPADWWDSYGAAAPILQKLTIRILSLTCSSSGCERNWS 427
BLAST of mRNA_H-elongata_contig16647.4173.1 vs. uniprot
Match: A0A6P6W3Z1_COFAR (uncharacterized protein LOC113729109 n=3 Tax=Coffea TaxID=13442 RepID=A0A6P6W3Z1_COFAR) HSP 1 Score: 77.4 bits (189), Expect = 4.270e-12 Identity = 79/312 (25.32%), Postives = 136/312 (43.59%), Query Frame = 1
Query: 19 CAAHAVDLLLKDFGNLDFFADTLKRINKVVKFVKNHHGTSAIHESHTNLR-LITPCATRFTTNVIVAMRMLKASVS----SVSDYIRTATVASVRAAGREVVSEISAGDALVGE-FWFEVNVFVQLMEPLSALLRMGDGE---SVTYAAEGEDWKDLDISTRMVAMKEKAAKRLNYVWNPMM-----SATFSLDPEYRNVNLLNTRNGQILKDLNTMFMRLLISHGNDPVAAISAAEDEPEGGPVRKAGSQFTRF--KSGKWHGADLLGYAKSMAPTDWWETYGVGMRELAELTVKVTSKVPASAGAECNWS 906
CAAH +DL+L+D G + D +K+ ++ F+ N + +++TN R L+ P TRF T I +L+ S S+ + +S R RE +E+S D ++ E FW +V +MEPL +L++ D + ++ E D + I + V EK ++ W + +A + L+P + ++ + L + RL +P + A KA ++ F K G++ A + + P +WW YG L + +KV S+ S+G E NWS
Sbjct: 345 CAAHCIDLMLEDIGQMKSIKDAIKQGKRITSFIYNSDKVVNLMKTYTNHRELLRPGITRFATEFIAMESLLRHSTELKRMCTSNEWQEYNSSSKR---REEAAEVS--DLILSERFWKKVRRVCAIMEPLVKVLKVIDQDKKPTLPIIYEAMDRAKMAIQSA-VKDYEKYWDIIDDRWYRQLHRNLHAAAYFLNPALQYSGTCEFNTSEVRRGLKEVIKRL------EPNLEVQA-----------KAMNEINTFVNKIGEFGSALAIKAVAASLPAEWWNMYGEEAPNLRNIAIKVLSQTCTSSGCERNWS 633
BLAST of mRNA_H-elongata_contig16647.4173.1 vs. uniprot
Match: UPI0010A2AF77 (uncharacterized protein LOC114712623 n=3 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A2AF77) HSP 1 Score: 75.9 bits (185), Expect = 1.110e-11 Identity = 84/329 (25.53%), Postives = 139/329 (42.25%), Query Frame = 1
Query: 19 CAAHAVDLLLKDFGNLDFFADTLKRINKVVKFVKNHHGTSAIHESHTNLR-LITPCATRFTTNVIV---------AMRMLKASVSSVSDYIRTATVASVRAAGREVVSEISAGDALVGEFWFEVNVFVQLMEPLSALLRMGDGES---VTYAAEGEDWKDLDISTRMVAMK---EKAAKRLNYVWN-----PMMSATFSLDPEYRNVNLLNTRNGQILKDLNTMFMRLLISHGNDPVAAISAAEDEPEGGPVRKA----GSQFTRFKSGKWHGADLLGYAKSMA--------PTDWWETYGVGMRELAELTVKVTSKVPASAGAECNWS 906
CAAH +DL+L+D G L F +T+ K+ F+ H ++ ++ R L P TRF T + A+R + AS VS + ++ G++V I GD+ FW + ++ + PL +LR+ DG+S + Y E D +I+ + +K K ++ WN P+ +A + L+P++ N + ++ L R++ P RK Q FKS K L G +SMA P WWE+YG +EL ++ +++ S ++ G E NWS
Sbjct: 138 CAAHCLDLVLEDIGQLPVFYNTITNAKKITTFIYRHTWVLNLYRKYSKGRELARPAVTRFATAYLTLSCIFRQKNALRTMFASDDWVSGSFAS------KSEGKQVADMIF-GDS---RFWSSIKYCLKCVSPLVKVLRLVDGDSKPAMPYIYEAMDRAKEEIADNFEKKESRYKKIWKIIDTRWNLQLHRPLHAAAYFLNPKFHYDEKFNA-DQEVYFGLYETIERMI---------------------PDRKTRFLVDQQLEAFKSAK----GLFG--RSMAIDTRNKKQPALWWESYGGEGKELQKIAMRILSLTCSATGCERNWS 428
BLAST of mRNA_H-elongata_contig16647.4173.1 vs. uniprot
Match: UPI000511298E (uncharacterized protein LOC103958368 isoform X1 n=3 Tax=Maleae TaxID=721813 RepID=UPI000511298E) HSP 1 Score: 75.1 bits (183), Expect = 2.310e-11 Identity = 83/319 (26.02%), Postives = 131/319 (41.07%), Query Frame = 1
Query: 16 KCAAHAVDLLLKDFGNLDFFADTLKRINKVVKFVKNHHGTSAIHESHTN-LRLITPCATRFTTNVIVAMRMLKASVSSVSDYIRTATVASVRAAGREVVSEISAGDALVG-EFWFEVNVFVQLMEPLSALLRMGDGESVTYAAEGEDWKDLDISTRMVAMKEKAAKRLNYV--------------WN-----PMMSATFSLDPEYR-NVNLLNTRNGQILKDLNTMFMRLLISHGNDPVAAISAAEDEPEGGPVRKAGSQFTRFKSGKWHGADLLGYAKSMAPTDWWETYGVGMRELAELTVKVTSKVPASAGAECNWS 906
+CAAH +DL LKD + +F DTLK V K++ H A+ TN ++ P TRF T+ + + K + V+ + S A RE ++++ + EFW V+ ++ + PL +LR D E A G ++ +D+ +KEK A LN V WN P+ +A + L+P++R N NT +I L R+L + A I + G + TR K P WW+ +G EL ++V +++G E NWS
Sbjct: 321 QCAAHCIDLTLKDIAKMKWFDDTLKHAKCVTKYLYGHQWVLALMRKFTNNTEILRPAVTRFATSFLTLQILQKQKENLVALFSSQKWSESTYAKSRE--AKLAKYYVIHDHEFWGRVSFCIRGVLPLVCVLREVDSEE--RHAMGFMYELIDV------VKEKIANNLNKVEKKYMPIWKKIDHRWNDQLTQPLYAAGYYLNPQFRYEDNFSNTE--EIRNGLFACMDRMLGNSKEREDADIQLDLYDRRFGDFADPMAMKTR---------------KRRTPLGWWQRFGNRTPELMMFAIRVLGLTCSASGCERNWS 612
BLAST of mRNA_H-elongata_contig16647.4173.1 vs. uniprot
Match: UPI0010A2CC46 (uncharacterized protein LOC114730731 n=2 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A2CC46) HSP 1 Score: 73.2 bits (178), Expect = 7.380e-11 Identity = 84/308 (27.27%), Postives = 139/308 (45.13%), Query Frame = 1
Query: 19 CAAHAVDLLLKDFGNLDFFADTLKRINKVVKFVKNHHG-TSAIHESHTNLRLITPCATRFTTNVIV--AMRMLKASVSS-VSDYIRTATVASVRAAGREVVSEISAGDALVGEFWFEVNVFVQLMEPLSALLRMGDGE---SVTYAAEGEDWKDLDISTRMVAMKEKAAKRLNYVWNPMMSATFSLDPEYRNVNLLNTR---NGQILKDLNTMFMRLLISHGNDPVAAISAAEDEPEGGPVRKAGSQFTRFKSGK--WHGADLLGYAKSMAPTDWWETYGVGMRELAELTVKVTSKVPASAGAECNWS 906
CAAH ++L+LKDF ++ +D + +K+ F NH S + + + ++ P ATRF T I ++ M K ++ + V D S AG+ + I L FW + V+++ PL LLR+ D + S+ Y EG + VA+KE KR ++ P S + + NL T N I+ D + L+ D S ++++ +G V K Q T ++ GK + A+ + P +WW YG + EL + +++ S+ AS+G E NWS
Sbjct: 65 CAAHCLNLVLKDFSSMPHVSDLASKASKITIFAYNHMVFLSWLRKRSSWKEIVRPGATRFATTFITLHSIYMHKNNLQALVVDKHFVDHKLSRTEAGKNFSALI-----LDNRFWNDCYQVVKIVSPLIKLLRIVDSDEKPSLPYVYEG-------MRRAKVAIKEMF-KRNKELYKPYTSIIQARWDRHLKTNLHATSYLLNSTIIYDPDCPSKSKLMMALID---VESYSDEDVDGFLVMK---QATTYREGKESFSRPSCQKAAQKLDPYEWWTYYGCSVPELQRVAMRILSQTSASSGCERNWS 353
BLAST of mRNA_H-elongata_contig16647.4173.1 vs. uniprot
Match: A0A843V1P5_COLES (BED-type domain-containing protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843V1P5_COLES) HSP 1 Score: 73.6 bits (179), Expect = 8.050e-11 Identity = 80/312 (25.64%), Postives = 119/312 (38.14%), Query Frame = 1
Query: 19 CAAHAVDLLLKDFGNLDFFADTLKRINKVVKFVKNHHGTSAIHESHTNLRLITPCATRFTTNVIVAMRMLKASVSSVSDYIRTATVASVRAAGREVVSEISAGDALVGEFWFEVNVFVQLMEPLSALLRMGDGE-----SVTYAA-EGEDWKDLDISTRMVAMKEKAAKRLNYVWNPMMS-----ATFSLDPEYRNVNLLNTRNGQILKDLNTMFMRLLISHGNDPVAAISAAEDEPEGGPVRKAGSQFTRFKS-----GKWHGADLLGYAKSMAPTDWWETYGVGMRELAELTVKVTSKVPASAGAECNWS 906
CAAH VDL+LK+ G L ++ K+ +++ NHH A T L+ P TRF TN I +LK + RT AG ++ G FW V VQ+++PL +LR+ DG+ + YA E K D+S R + + W+ MS A + L P Y +S+ + +AA FTR KS G + + + DWW +G L ++ VK+ S+ +S+G E NWS
Sbjct: 369 CAAHCVDLMLKEIGTLRPVKTVVEAGQKITRYIYNHHVVLAWMRESTGGELLRPAITRFATNFIALQSLLKHK-DGLKRMFRTDRWMQSTFAGTADGKDVE-GIVCNANFWDRVFKLVQIIKPLYEVLRVVDGDRRPSIGLVYAKIEAVKKKIHDVSPRYAHLVLDVVEDR---WDRQMSRDLHMAAYYLHPTYH--------------------YAFELSYEDHLIAA-------------------FTRMKSFREGVGSFAEPSAVAGRDRIDGADWWFNFGHSTPILRKIAVKILSQTSSSSGCERNWS 636 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16647.4173.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig16647.4173.1 >prot_H-elongata_contig16647.4173.1 ID=prot_H-elongata_contig16647.4173.1|Name=mRNA_H-elongata_contig16647.4173.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=301bp MTGMKCAAHAVDLLLKDFGNLDFFADTLKRINKVVKFVKNHHGTSAIHESback to top mRNA from alignment at H-elongata_contig16647:5844..7052- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig16647.4173.1 ID=mRNA_H-elongata_contig16647.4173.1|Name=mRNA_H-elongata_contig16647.4173.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1209bp|location=Sequence derived from alignment at H-elongata_contig16647:5844..7052- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig16647:5844..7052- >mRNA_H-elongata_contig16647.4173.1 ID=mRNA_H-elongata_contig16647.4173.1|Name=mRNA_H-elongata_contig16647.4173.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1806bp|location=Sequence derived from alignment at H-elongata_contig16647:5844..7052- (Himanthalia elongata Himel1 dioecious)back to top |