mRNA_H-elongata_contig165822.4146.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig165822.4146.1 vs. uniprot
Match: A0A6H5KQ50_9PHAE (Methyltransf_25 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ50_9PHAE) HSP 1 Score: 106 bits (264), Expect = 2.550e-26 Identity = 49/64 (76.56%), Postives = 57/64 (89.06%), Query Frame = 1
Query: 1 WSPPLDGPALDFGCGTGSLTLALRDGLGQRVTGVDTSRAMLEQFEKKAEGQGITTVAVEASYLG 192
W+PPLDGP LDFGCGTG LT+ALRD LG+ VTGVDTSRAMLEQF++KAEG+G+TTVAVE + G
Sbjct: 48 WTPPLDGPTLDFGCGTGCLTMALRDDLGESVTGVDTSRAMLEQFDRKAEGRGVTTVAVELTGPG 111
BLAST of mRNA_H-elongata_contig165822.4146.1 vs. uniprot
Match: A0A1A9IT14_9ACTN (SAM-dependent methyltransferase n=4 Tax=unclassified Streptomyces TaxID=2593676 RepID=A0A1A9IT14_9ACTN) HSP 1 Score: 55.5 bits (132), Expect = 1.070e-7 Identity = 30/52 (57.69%), Postives = 33/52 (63.46%), Query Frame = 1
Query: 1 WSPPLDGPALDFGCGTGSLTLALRDGLGQRVTGVDTSRAMLEQFEKKAEGQG 156
W PP LD GCGTGSL+L L G G RVTGVD+S AMLE+ K G G
Sbjct: 34 WLPPRPAAILDLGCGTGSLSL-LAAGQGHRVTGVDSSPAMLERARAKLAGAG 84
BLAST of mRNA_H-elongata_contig165822.4146.1 vs. uniprot
Match: A0A1V5QRK6_9BACT (Trans-aconitate 2-methyltransferase n=1 Tax=Acidobacteria bacterium ADurb.Bin340 TaxID=1852787 RepID=A0A1V5QRK6_9BACT) HSP 1 Score: 54.7 bits (130), Expect = 2.230e-7 Identity = 33/64 (51.56%), Postives = 41/64 (64.06%), Query Frame = 1
Query: 10 PLDGP--ALDFGCGTGSLTLALRDGLGQRVTGVDTSRAMLEQFEKK---AEGQGITTVAVEASY 186
PL G ALD+GCGTG LTLALR +G R+TGVDTS AML + E K G+ V ++A +
Sbjct: 33 PLSGTDAALDYGCGTGLLTLALRPAVG-RITGVDTSPAMLSRLEAKLAEVPDAGVEAVLLDAEH 95
BLAST of mRNA_H-elongata_contig165822.4146.1 vs. uniprot
Match: A0A2N2GHF4_9DELT (SAM-dependent methyltransferase n=1 Tax=Deltaproteobacteria bacterium HGW-Deltaproteobacteria-6 TaxID=2013756 RepID=A0A2N2GHF4_9DELT) HSP 1 Score: 53.1 bits (126), Expect = 9.190e-7 Identity = 29/54 (53.70%), Postives = 37/54 (68.52%), Query Frame = 1
Query: 28 LDFGCGTGSLTLALRDGLGQRVTGVDTSRAMLEQFEKKAEGQGITTVAVEASYL 189
LDFGCGTG L LAL+ L +TGVD+SR ML+ F +K +G+T V+ A YL
Sbjct: 45 LDFGCGTGLLALALQP-LVHAITGVDSSRGMLDVFHRKISDRGLTNVS--AQYL 95
BLAST of mRNA_H-elongata_contig165822.4146.1 vs. uniprot
Match: A0A3A2IYZ4_9GAMM (Class I SAM-dependent methyltransferase n=1 Tax=Methylococcales bacterium TaxID=2304002 RepID=A0A3A2IYZ4_9GAMM) HSP 1 Score: 52.0 bits (123), Expect = 2.350e-6 Identity = 31/59 (52.54%), Postives = 36/59 (61.02%), Query Frame = 1
Query: 16 DGPALDFGCGTGSLTLALRDGLGQRVTGVDTSRAMLEQFEKKAEGQGITTVAVEASYLG 192
D LDFGCGTG +TLAL +G +TG DTS MLE +KA QGI AV +LG
Sbjct: 40 DQEVLDFGCGTGLVTLALGPVVGS-ITGADTSTGMLETIAEKARSQGI---AVPLRHLG 94
BLAST of mRNA_H-elongata_contig165822.4146.1 vs. uniprot
Match: A0A832B7A1_9BACT (Class I SAM-dependent methyltransferase n=1 Tax=Chthonomonadetes bacterium TaxID=2282152 RepID=A0A832B7A1_9BACT) HSP 1 Score: 50.8 bits (120), Expect = 6.750e-6 Identity = 24/47 (51.06%), Postives = 35/47 (74.47%), Query Frame = 1
Query: 28 LDFGCGTGSLTLALRDGLGQRVTGVDTSRAMLEQFEKKAEGQGITTV 168
+D+GCGTG +TL L+ GL +TG+D+S AML + E+KA+ QG+ V
Sbjct: 43 VDYGCGTGLVTLELQ-GLAAEITGIDSSPAMLAELERKAQDQGLGRV 88
BLAST of mRNA_H-elongata_contig165822.4146.1 vs. uniprot
Match: A0A7C9JAK3_9DELT (Methyltransferase domain-containing protein n=1 Tax=Solidesulfovibrio aerotolerans TaxID=295255 RepID=A0A7C9JAK3_9DELT) HSP 1 Score: 50.8 bits (120), Expect = 6.810e-6 Identity = 28/55 (50.91%), Postives = 36/55 (65.45%), Query Frame = 1
Query: 25 ALDFGCGTGSLTLALRDGLGQRVTGVDTSRAMLEQFEKKAEGQGITTVAVEASYL 189
ALDFGCGTG LTL L ++VTG+DTS ML + K E G+T VA+ ++ L
Sbjct: 45 ALDFGCGTGLLTLKLA-AQAEQVTGLDTSAGMLAELATKIERAGLTNVAMLSADL 98
BLAST of mRNA_H-elongata_contig165822.4146.1 vs. uniprot
Match: A0A2I0D150_9EURY (SAM-dependent methyltransferase n=1 Tax=Methanoregula sp. TaxID=2052170 RepID=A0A2I0D150_9EURY) HSP 1 Score: 50.8 bits (120), Expect = 7.160e-6 Identity = 28/62 (45.16%), Postives = 38/62 (61.29%), Query Frame = 1
Query: 4 SPPLDGPALDFGCGTGSLTLALRDGLGQRVTGVDTSRAMLEQFEKKAEGQGITTVAVEASYL 189
+P +D LDFGCGTG LTL + L + VTG+D+S+ ML E+K QG+T V+ L
Sbjct: 45 TPEMD--VLDFGCGTGLLTLQFQP-LARSVTGIDSSKGMLAVLEEKIREQGLTNVSARCIDL 103
BLAST of mRNA_H-elongata_contig165822.4146.1 vs. uniprot
Match: A0A0B1U1X4_9DELT (Pedicted SAM-dependent methyltransferase n=3 Tax=unclassified Desulfovibrio TaxID=2593640 RepID=A0A0B1U1X4_9DELT) HSP 1 Score: 50.4 bits (119), Expect = 9.450e-6 Identity = 28/50 (56.00%), Postives = 32/50 (64.00%), Query Frame = 1
Query: 25 ALDFGCGTGSLTLALRDGLGQRVTGVDTSRAMLEQFEKKAEGQGITTVAV 174
ALDFGCGTG LTL L + GQ VTG+DTS ML + K E G+ V V
Sbjct: 45 ALDFGCGTGLLTLELAERAGQ-VTGLDTSDGMLAELSAKIERAGLGNVGV 93
BLAST of mRNA_H-elongata_contig165822.4146.1 vs. uniprot
Match: A0A6S6M2Y5_9DELT (Methyltransferase n=2 Tax=Citrifermentans TaxID=2883512 RepID=A0A6S6M2Y5_9DELT) HSP 1 Score: 50.1 bits (118), Expect = 1.290e-5 Identity = 28/58 (48.28%), Postives = 39/58 (67.24%), Query Frame = 1
Query: 10 PLDG--PALDFGCGTGSLTLALRDGLGQRVTGVDTSRAMLEQFEKKAEGQGITTVAVE 177
PLDG ALD+GCG+G +TL L+ +G R+TG D+S+ MLE E+K E I V ++
Sbjct: 39 PLDGRMEALDYGCGSGLVTLGLQPLVG-RITGADSSKGMLEVLERKLEQGKIENVTLQ 95 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig165822.4146.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig165822.4146.1 >prot_H-elongata_contig165822.4146.1 ID=prot_H-elongata_contig165822.4146.1|Name=mRNA_H-elongata_contig165822.4146.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=65bp WSPPLDGPALDFGCGTGSLTLALRDGLGQRVTGVDTSRAMLEQFEKKAEGback to top mRNA from alignment at H-elongata_contig165822:125..319- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig165822.4146.1 ID=mRNA_H-elongata_contig165822.4146.1|Name=mRNA_H-elongata_contig165822.4146.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=195bp|location=Sequence derived from alignment at H-elongata_contig165822:125..319- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig165822:125..319- >mRNA_H-elongata_contig165822.4146.1 ID=mRNA_H-elongata_contig165822.4146.1|Name=mRNA_H-elongata_contig165822.4146.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=390bp|location=Sequence derived from alignment at H-elongata_contig165822:125..319- (Himanthalia elongata Himel1 dioecious)back to top |