mRNA_H-elongata_contig1656.4131.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig1656.4131.1 vs. uniprot
Match: A0A0A9Z683_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=3 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Z683_LYGHE) HSP 1 Score: 198 bits (504), Expect = 5.270e-52 Identity = 129/420 (30.71%), Postives = 219/420 (52.14%), Query Frame = 1
Query: 1 VDRPKDKLVVGTKMLYERKVGQNGKIEKYKCRLVAQGFWQVEGVHDTETYLLTPATASIRMLLATAATKDGELRHFDAEKAFLKADIDEELYIEIP------GSIRSFR------------------------GHRQRRIRACFVRSLTKRRKWWWSYMWTTFLAHAKDKATMDRFAAELGQKFKLKDMGDAMYYMGCHISRNHKAHELKIDQHLHVESMMEKFDVKKGSKIPTTLGVPT-LSKADEPWNPEEKEEMRKFPYREAARALLWTTTMTRPDIASPVRAIARFCKNPGSAHKRTVMKVM*YLLYTKGWGITYDGQGC*LCLEAYKDSDFGACLDTRRSVSGAVLMLAKGAINWYSRMQGVTASGTSEAEYIVLSKAVKEVIFLKEVQEFMEPSMRGPSNWPPISMLVVGQSTL 1167
VD P K+ + +K ++ K GKI K+K RLV +G Q +G+ ET+ +SIR LLA AA +D ++ DA AFL+ D+ EE+Y+ P G + R G RQ + C ++++ + + L + DK ++L + FK+ D+G+A + +G ISR+ + ++ +DQ ++++++ +F ++ + T L LSK +P +P+E+++M PY+EA +LL+ + + RPDIA V ++RF NPG AH V +++ Y+ T W + YDG + Y DSDF + +D R+SV+G V ++ G+++W ++ Q TA T+EAEY+ LS A +E ++L+ + E + P PS P+ + V Q L
Sbjct: 875 VDLPPGKVPLNSKWVFRTKRDVTGKIVKHKARLVVKGCAQRKGLDFEETFSPVVRYSSIRYLLALAAKRDMDIHQMDAVSAFLQGDLTEEIYMRQPEGYQESGKVCRLRKSLYGLKQASRVWNIKLDRSLKTIGLRQSKFDPCIYYKSSQKKMVFVAVWVDDLLIFSDDKKLTQEVKSQLMKCFKMTDIGEAKFVLGFQISRDRERKKIWMDQRAYIDNVLIRFGMENCNPAATPLDPNIKLSKDQQPSSPDERKKMEAIPYQEAVGSLLFASQVCRPDIAFAVSLVSRFNSNPGPAHWAAVKRILRYMKGTSDWKLEYDGTKS-SEITGYCDSDFASDVDERKSVTGYVFLMCDGSVSWGTKKQPTTALSTTEAEYMALSAATQEALWLRGLSEELVP----PSERIPLRIFVDNQGAL 1289
BLAST of mRNA_H-elongata_contig1656.4131.1 vs. uniprot
Match: A0A2N9IFW4_FAGSY (CCHC-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IFW4_FAGSY) HSP 1 Score: 194 bits (492), Expect = 1.460e-50 Identity = 129/378 (34.13%), Postives = 196/378 (51.85%), Query Frame = 1
Query: 1 VDRPKDKLVVGTKMLYERKVGQNGKIEKYKCRLVAQGFWQVEGVHDTETYLLTPATASIRMLLATAATKDGELRHFDAEKAFLKADIDEELYIEIPGSIRSFRGHRQRRIRACFVRSLTKRRKWWWSYMWTTFLAHAKDKATMDRFAAELGQKFKLKDMGDAMYYMGCHISRNHKAHELKIDQHLHVESMMEKF---DVKKGSKIPTTLGVPTLSKADEPWNPEEKEEMRKFPYREAARALLWTTTMTRPDIASPVRAIARFCKNPGSAHKRTVMKVM*YLLYTKGWGITYDGQGC*LCLEAYKDSDFGACLDTRRSVSGAVLMLAKGAINWYSRMQGVTASGTSEAEYIVLSKAVKEVIFLKE-VQEF-MEPSMRGP 1119
VD+P+ +G K +Y+RK+G GK+E YK RLVA+G+ Q G+ ET+ SIR+LL+ AA D E+ D + AFL +I EE+Y++ P ++ A+ K M L F +KD+G+A Y +G + R+ K L + Q +++ ++ +F D KKG P GV LSK P EE+E+MR PY A +L++ TRPDI V ++R+ NPG H V ++ YL TK + + + + L ++ Y DS+F + +D R+S+SG V L KGAI+W S Q TA T+EAEYI S+A KE +++++ +QE + PS+ P
Sbjct: 583 VDKPEGIKPIGCKWIYKRKLGPTGKVETYKARLVAKGYTQKVGIDYEETFSPVAMLKSIRILLSIAAHYDYEIWQMDVKTAFLNGNIREEIYMDQPVGFH---------------------------------ISWARIKRAMSSIKMWLSSHFAMKDLGEASYILGIKLFRDRKKRLLGLSQVNYIDKILARFSMQDSKKGFS-PFRHGV-HLSKNMCPKTQEEREKMRNCPYASAVGSLMYAMLCTRPDICYAVSIVSRYQSNPGPEHWTAVKHILKYLNRTKHYFLVFGSKD--LNIQGYTDSNFQSDIDDRKSISGFVFTLGKGAISWRSCKQDTTADSTTEAEYIAASEAAKEAVWIRKFIQELGVVPSIESP 923
BLAST of mRNA_H-elongata_contig1656.4131.1 vs. uniprot
Match: A0A146IDX7_MYCCL (Polyprotein (Fragment) n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146IDX7_MYCCL) HSP 1 Score: 192 bits (489), Expect = 4.960e-50 Identity = 129/372 (34.68%), Postives = 187/372 (50.27%), Query Frame = 1
Query: 1 VDRPKDKLVVGTKMLYERKVGQNGKIEKYKCRLVAQGFWQVEGVHDTETYLLTPATASIRMLLATAATKDGELRHFDAEKAFLKADI--DEELYIEIPGSIRSFRGHRQRRIRACFVRSLTKRRKWWWSYMWTTFLAHAKDKATMDRFAAELGQKFKLKDMGDAMYYMGCHISRNHKAHELKIDQHLHVESMMEKFDVKKGSKIPTTLGVP-TLSKADEPWNPEEKEEMRKFPYREAARALLWTTTMTRPDIASPVRAIARFCKNPGSAHKRTVMKVM*YLLYTKGWGITYDGQGC*LCLEAYKDSDFGACLDTRRSVSGAVLMLAKGAINWYSRMQGVTASGTSEAEYIVLSKAVKEVI-FLKEVQEFMEP 1104
V RPKD+ VVG K K +NG IEKYK RLVA+GF QV+GV ET+ T +S+R LL+ AA + E FD AFL + DEE+++E P + + R+ RK A +D E+G + +G + +G + RN L + Q ++++++EKF + + L LS P + EK +M+K PYRE L+W +T TRPD+A V ++RF NPG H +V+ YL T+ G+TY G L L + D+D G L+ R++VSG V L G+++W S+ Q +TA T+EAEYI L+ KE + F K + E P
Sbjct: 822 VTRPKDRNVVGAKWALRIKRQENGAIEKYKARLVARGFTQVQGVDYFETFSPTAKLSSLRTLLSIAAGYNWETEVFDYSAAFLNGEFSGDEEIFMEQPPHYHNGDNTQVIRLSRTIYGLKQSARK---------CTITGSSPALIDEVQREIGALLPITRLGPISWLLGMEVKRNRAERTLTLTQSTYIDALIEKFGMSNAKPLSVPLDPNHQLSIEQCPTSDTEKLDMKKVPYRELIGGLVWLSTATRPDLAFTVTTLSRFISNPGRPHWDAAKRVLQYLKGTRTLGLTYGGSAEKLGLNIFADAD-GMSLEDRKAVSGYVFTLNGGSVSWSSKQQAITALSTTEAEYISLTHCAKEALWFRKFISELFGP 1183
BLAST of mRNA_H-elongata_contig1656.4131.1 vs. uniprot
Match: A0A2N9IUC8_FAGSY (Integrase catalytic domain-containing protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IUC8_FAGSY) HSP 1 Score: 191 bits (484), Expect = 8.200e-50 Identity = 137/412 (33.25%), Postives = 205/412 (49.76%), Query Frame = 1
Query: 1 VDRPKDKLVVGTKMLYERKVGQNGKIEKYKCRLVAQGFWQVEGVHDTETYLLTPATASIRMLLATAATKDGELRHFDAEKAFLKADIDEELYIEIP----------------------------------GSIRSFRGHRQRRIRACFVRSLTKRRKWWWSYMWTTFLAHAKDKATMDRFAAELGQKFKLKDMGDAMYYMGCHISRNHKAHELKIDQHLHVESMMEKF---DVKKGSKIPTTLGVPTLSKADEPWNPEEKEEMRKFPYREAARALLWTTTMTRPDIASPVRAIARFCKNPGSAHKRTVMKVM*YLLYTKGWGITYDGQGC*LCLEAYKDSDFGACLDTRRSVSGAVLMLAKGAINWYSRMQGVTASGTSEAEYIVLSKAVKEVIFLKE-VQEF-MEPSMRGP 1119
VD+P+ +G K +Y+RK+G GK+E YK RLVA+G+ Q G+ ET+ SIR+LL+ AA D E+ D + AFL +I EE+Y++ P +I+SF G Q C + ++ R + L D M L F +KD+G+A Y +G + R+ K L + Q +++ ++ +F D KKG P GV LSK P EE+E+MR PY A +L++ TRPDI V ++R+ NPG H V ++ YL TK + + + + L ++ Y DSDF + +D R+S+SG V L KGAI+W S Q TA T EAEYI S+A KE +++++ +QE + PS+ P
Sbjct: 350 VDKPEGIKPIGCKWIYKRKLGPTGKVETYKVRLVAKGYTQKAGIDYEETFSPVAMLKSIRILLSIAAHYDYEIWQMDVKTAFLNGNIREEIYMDQPVGFISHGQESKVCKLMKSIYGLKQASRSWNIRFDEAIKSF-GFSQNIDEPCVYKKVSGRIITFLILYVDDILLIGNDVGAMSSIKMWLSSHFAMKDLGEASYILGIKLFRDRKKRLLGLSQVNYIDKILARFSMQDSKKGFS-PFRHGV-HLSKNMCPKTQEEREKMRNCPYASAVGSLMYAMLCTRPDICYAVSIVSRYQSNPGPEHWTAVKHILKYLNRTKHYFLVFGSKD--LNIQGYTDSDFQSDIDDRKSISGFVFTLGKGAISWRSCKQDTTADSTIEAEYIAASEAAKEAVWIRKFIQELGVVPSIESP 756
BLAST of mRNA_H-elongata_contig1656.4131.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE) HSP 1 Score: 183 bits (465), Expect = 1.320e-48 Identity = 121/408 (29.66%), Postives = 207/408 (50.74%), Query Frame = 1
Query: 10 PKDKLVVGTKMLYERKVGQNGKIEKYKCRLVAQGFWQVEGVHDTETYLLTPATASIRMLLATAATKDGELRHFDAEKAFLKADIDEELYIEIPGSIRSFRGHRQRRI----RACFVRSLTKRRKWWWSYMWTTFLAHAKDKATMD---------------------------------RFAAELGQKFKLKDMGDAMYYMGCHISRNHKAHELKIDQHLHVESMMEKFDVKKGSKIPTTLGVPTLSKADEPWNPEEKEEMRKFPYREAARALLWTTTMTRPDIASPVRAIARFCKNPGSAHKRTVMKVM*YLLYTKGWGITYDGQGC*LCLEAYKDSDFGACLDTRRSVSGAVLMLAKGAINWYSRMQGVTASGTSEAEYIVLSKAVKEVIFLKEVQEFMEPSMRGPS 1122
P+ + V +K + K ++GKIEK+K RLVA+GF Q+ V + P++ASI+++LA A K +L H+D ++AF A +DE++++ +P G + ++ RA + L + + W + T + + ++ D A L + F KD+G+ +++ GC + R+ +A L+I Q +++S++ +FDV+ S IP + GV K D+ E ++P REA +++W +T +RPDI+ VRA+AR P H + ++K++ YL T+ GITY+ +G L L Y D+ + D RRSVSG + I+ S+ Q + + ++EAEYI + VKE +F++ V F+ P G S
Sbjct: 39 PEGRRPVSSKWRFTWKTNKDGKIEKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKSLKLNHWDVKQAFTHAKLDEDVFLRLPAGC----GEKSHKVVKAERAIY--GLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLASLNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDD-------ESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYE-RGSGLGLAVYVDASYADAED-RRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSS 431
BLAST of mRNA_H-elongata_contig1656.4131.1 vs. uniprot
Match: A5AHF5_VITVI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5AHF5_VITVI) HSP 1 Score: 182 bits (461), Expect = 1.660e-48 Identity = 117/361 (32.41%), Postives = 177/361 (49.03%), Query Frame = 1
Query: 1 VDRPKDKLVVGTKMLYERKVGQNGKIEKYKCRLVAQGFWQVEGVHDTETYLLTPATASIRMLLATAATKDGELRHFDAEKAFLKADIDEELYIEIPGSIRSFRGHRQRRIRACFVRSLTKRRKWWWSYMWTTFLAHAKDKATMDRFAAELGQKFKLKDMGDAMYYMGCHISRNHKAHELKIDQHLHVESMMEKFDVKK-GSKIPTTLGVPTLSKADEPWNPEEKEEMRKFPYREAARALLWTTTMTRPDIASPVRAIARFCKNPGSAHKRTVMKVM*YLLYTKGWGITYDGQGC*LCLEAYKDSDFGACLDTRRSVSGAVLMLAKGAINWYSRMQGVTASGTSEAEYIVLSKAVKEVIFLK 1080
++ P VG K +++ K G IE+YK RLVA+GF Q EG+ +T+ S+R+++ A D EL D + AFL ++DE++Y+E P D + L + F + DMG+A Y +G I R+ L + Q +++ ++E+F+++ S I L LSK P N E+E+M+K PY A +L++ T TRPDI+ V R+ +PG H + KVM YL TK + +TY L + Y DSD+G CLD+ +S SG V MLA GAI+W S Q +TAS T EAE++ +A ++L+
Sbjct: 79 IELPNSCKPVGCKWIFKTKRDAKGNIERYKARLVAKGFTQKEGIDYKDTFSPVSKKDSLRIIMTLVAHFDLELHQMDVKTAFLNGNLDEDIYMEQPEG----------------------------------------DLGLLHETKEYLSKNFHMVDMGEANYVIGIEIFRDRSRGVLGLSQKGYIDWVLERFNMQSCSSGIAPILKGDKLSKMQCPRNNMEREQMKKIPYASAVGSLMYAQTCTRPDISFVVGMFGRYQSDPGFEHWKAAKKVMRYLQGTKDYMLTYKRSEQ-LEVVGYSDSDYGGCLDSLKSTSGFVFMLANGAISWKSEKQSITASSTMEAEFVACFEASSHALWLR 398
BLAST of mRNA_H-elongata_contig1656.4131.1 vs. uniprot
Match: A0A438EN28_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438EN28_VITVI) HSP 1 Score: 184 bits (468), Expect = 2.190e-48 Identity = 126/378 (33.33%), Postives = 189/378 (50.00%), Query Frame = 1
Query: 1 VDRPKDKLVVGTKMLYERKVGQNGKIEKYKCRLVAQGFWQVEGVHDTETYLLTPATASIRMLLATAATKDGELRHFDAEKAFLKADIDEELYIEIPGSIRSFRGH-----------------RQRRIRACFVRSLTKRRKWWWSYMWTTFLAHAKDKATMDRFAAELGQKFKLKDMGDAMYYMGCHISRNHKAHELKIDQHLHVESMMEKFDVKKGSKIPTTLGVPTLSKADE-PWNPEEKEEMRKFPYREAARALLWTTTMTRPDIASPVRAIARFCKNPGSAHKRTVMKVM*YLLYTKGWGITYDGQGC*LCLEAYKDSDFGACLDTRRSVSGAVLMLAKGAINWYSRMQGVTASGTSEAEYIVLSKAVKEVIFLK 1080
V+ P +G K +++ K G IE+YK RLVA+GF Q EG+ TET+ S+R++LA A D EL+ D + AFL +++EE+Y++ P S G RQ + CF+ Y+ LA DK + L + F +KDMG+A Y +G I R+ L + Q ++ ++E+F +K S + + D+ P N E+E+M+ PY A +L++ TRPDIA V + R+ NPG H + KVM YL TK + + Y L + Y DSDF C+D+R+S SG + +LA GAI+W S Q +TA+ T EAE+I +A ++LK
Sbjct: 273 VELPNGVKTIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPVSKKDSLRIILALVAHFDLELQQMDVKTAFLNGELEEEVYMKQPEGFPSSDGEQLVCKLKKSIYGLKQASRQCGSKVCFLVL----------YVDDILLA-TNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFKGILGLSQETYINKVLERFRMKNCSPSVSPIVKGDRFNLDQCPKNDLEREQMKNIPYASAVGSLMYAQVCTRPDIAFAVGMLGRYQSNPGIDHWKAAKKVMRYLQGTKDYKLMYRRTSN-LEVVGYSDSDFAGCVDSRKSTSGYIFILAGGAISWRSVKQTMTATSTMEAEFISCFEATSHGVWLK 638
BLAST of mRNA_H-elongata_contig1656.4131.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY) HSP 1 Score: 187 bits (476), Expect = 2.720e-48 Identity = 127/410 (30.98%), Postives = 210/410 (51.22%), Query Frame = 1
Query: 1 VDRPKDKLVVGTKMLYERKVGQNGKIEKYKCRLVAQGFWQVEG--VHDTETYLLTPATASIRMLLATAATKDGELRHFDAEKAFLKADIDEELYIEIP-GSIRSFRGHRQRRIRACFVRSLTKRRKWWWSYMWTTF-------------------------LAHAKDKATM-------DRFAAELGQKFKLKDMGDAMYYMGCHISRNHKAHELKIDQHLHVESMMEKFDVKKGS--KIPTTLGVPTLSKADEPWNPEEKEEMRKFPYREAARALLWTTTMTRPDIASPVRAIARFCKNPGSAHKRTVMKVM*YLLYTKGWGITY--DGQGC*LCLEAYKDSDFGACLDTRRSVSGAVLMLAKGAINWYSRMQGVTASGTSEAEYIVLSKAVKEVIFLKEV-QEFMEPSM 1110
V+ P D +VG+K+++ K G + +K RLVAQGF QV G HD ET+ SIR +L+ AA D ELR D + A+L ++E +Y+ +P G + H R++ L + + W+ + +A + D T+ D FA ++ Q+F++ D+GD + +G + R+ +A + I Q ++++++ +F++ + + IP G P L P P + E+MR PYREA +L++ TRPDI V A+++F +NPG AH + +V+ YL ++ + Y + +G L Y D+D+G+ + R S+SG V L GAI+W S+ Q V A ++EAEYI L+ A KE I+L+ V + + P +
Sbjct: 1063 VEPPPDANIVGSKLVFRVKHDAEGAVSGFKARLVAQGFSQVPGRDYHDDETFAPVSRLPSIRTILSLAARHDWELRQMDVKSAYLNGILEETVYMRLPPGFAPPEQSHLVCRLKKTLY-GLKQAGRGWYKTLTAAMENMGFTRCVADHAVFYKREGESAIIVAASVDDLTITGTSDLVDAFAVDIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIPLQPGSP-LGNHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDITFAVTALSQFMQNPGRAHWDALKRVLRYLKGSRELWLVYGTNNEG----LRGYSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIALTHATKEAIWLRYVLSDILHPEL 1466
BLAST of mRNA_H-elongata_contig1656.4131.1 vs. uniprot
Match: A0A2G8RW53_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RW53_9APHY) HSP 1 Score: 187 bits (476), Expect = 2.990e-48 Identity = 125/401 (31.17%), Postives = 203/401 (50.62%), Query Frame = 1
Query: 1 VDRPKDKLVVGTKMLYERKVGQNGKIEKYKCRLVAQGFWQVEG--VHDTETYLLTPATASIRMLLATAATKDGELRHFDAEKAFLKADIDEELYIEIPGSIRS-FRGHRQRRIRACFVRSLTKRRKWWWSYMWTTFLAHAKDKATMDR--------------------------------FAAELGQKFKLKDMGDAMYYMGCHISRNHKAHELKIDQHLHVESMMEKFDVKKGS--KIPTTLGVPTLSKADEPWNPEEKEEMRKFPYREAARALLWTTTMTRPDIASPVRAIARFCKNPGSAHKRTVMKVM*YLLYTKGWGITY--DGQGC*LCLEAYKDSDFGACLDTRRSVSGAVLMLAKGAINWYSRMQGVTASGTSEAEYIVLSKAVKEVIFLKEV 1086
V+ P D +VG+K+++ K G + +K RLVAQGF QV G HD ET+ SIR +LA AA D ELR D + A+L ++E +Y+ P S + H R++ L + + W+ + L + D FAA++ Q+F++ D+G+ + +G + R+ +A + I Q ++++ + +F+++ + IP G P L + P P + E+MR PYREA +L++ TRPD+ V A+++F +NPG AH + +V+ YL T+ + Y D G L ++ D+D+G+ ++ R S+SG V L GAI+W S+ Q V A ++EAEYI L+ A KE I+L+ V
Sbjct: 1846 VEPPPDANIVGSKLVFRVKHNVEGTVSGFKARLVAQGFSQVPGRDYHDDETFAPVSRLPSIRTILALAARHDWELRQMDVKSAYLNGTLEETVYMHQPPSFSMPEQSHLVCRLKKTLY-GLKQAGRGWYKTLTAAMLQMGFTRCVADHAVFYKREGESAIIVAASVDDLTIAGTSDLVNAFAADIKQRFEMSDLGNLHWILGIEVRRDCQARTIAISQRSYIDTTVSRFNLEDAAPLSIPLQPGSP-LGQHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDVTFAVTALSQFMQNPGRAHWDAIKRVLRYLKGTRELWLVYGDDNNG----LHSFSDADWGSSMEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIALTHATKEAIWLRYV 2240
BLAST of mRNA_H-elongata_contig1656.4131.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY) HSP 1 Score: 187 bits (474), Expect = 4.930e-48 Identity = 124/400 (31.00%), Postives = 210/400 (52.50%), Query Frame = 1
Query: 1 VDRPKDKLVVGTKMLYERKVGQNGKIEKYKCRLVAQGFWQVEGVHDTETYLLTPATASIRMLLATAATKDGELRHFDAEKAFLKADIDEELYI-EIPGSIRSFRGHRQRRIRACFVRSLTKRRKWWWSYMW---------------------------TTFLAHAKDKATMDR-------FAAELGQKFKLKDMGDAMYYMGCHISRNHKAHELKIDQHLHVESMMEKFDVKKGSKIPTTLGVPT-LSKADEPWNPEEKEEMRKFPYREAARALLWTTTMTRPDIASPVRAIARFCKNPGSAHKRTVMKVM*YLLYTKG----WGITYDGQGC*LCLEAYKDSDFGACLDTRRSVSGAVLMLAKGAINWYSRMQGVTASGTSEAEYIVLSKAVKEVIFLK 1080
V+ P++ VVG+K ++ K NGKIE YK RLVAQGF Q+ G+ +T+ ASIR++LA AA D ++ D + A+L AD++EE+++ + PG + + H +R + L + + W+ M T +A + D T+ F E+ ++F++ D+G+ + +G + R+ A L + Q +++ +M +F+++ + T L LS P P E E+MR PYREA +L++ TRPDIA V A+++F +NPG AH +V+ YL T+ +G+T +G +E + D+D+G+ + R S+ G V ++ GA++W ++ Q V A ++EAEYI L+ A KE I+++
Sbjct: 995 VEPPENTNVVGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFMKQPPGQAKRGKEHWVCLLRHA-IYGLKQSGRQWFKKMCAALDEMGLSRSLVDHCVFYLDEDDDSVTLIIALSVDDTTIAGTNNAVLWFKTEISKRFEMTDLGEMHWILGIEVRRDRAARTLSLSQRAYIDGLMARFNLEDAKPLSTPLEPGAILSIRQCPSTPREFEDMRNVPYREAIGSLMYAALGTRPDIAFAVTALSQFMQNPGRAHWEAAKRVLRYLKSTREKWLTYGLTRNG------VEGFSDADWGSS-EHRHSICGYVFLIDGGAVSWSAKKQPVVALSSTEAEYIALTHAAKEAIWVR 1386 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1656.4131.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1656.4131.1 >prot_H-elongata_contig1656.4131.1 ID=prot_H-elongata_contig1656.4131.1|Name=mRNA_H-elongata_contig1656.4131.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=263bp MLYERKVGQNGKIEKYKCRLVAQGFWQVEGVHDTETYLLTPATASIRMLLback to top mRNA from alignment at H-elongata_contig1656:4300..5696- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1656.4131.1 ID=mRNA_H-elongata_contig1656.4131.1|Name=mRNA_H-elongata_contig1656.4131.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1397bp|location=Sequence derived from alignment at H-elongata_contig1656:4300..5696- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1656:4300..5696- >mRNA_H-elongata_contig1656.4131.1 ID=mRNA_H-elongata_contig1656.4131.1|Name=mRNA_H-elongata_contig1656.4131.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1578bp|location=Sequence derived from alignment at H-elongata_contig1656:4300..5696- (Himanthalia elongata Himel1 dioecious)back to top |