mRNA_H-elongata_contig165388.4117.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig165388.4117.1 vs. uniprot
Match: A0A6H5KX02_9PHAE (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX02_9PHAE) HSP 1 Score: 216 bits (549), Expect = 2.560e-69 Identity = 99/121 (81.82%), Postives = 114/121 (94.21%), Query Frame = 1
Query: 1 KVFTTDGGVKYIVLKEGEGPLAQDGDFCVVEFTGFLPDGRVFDASNSPGRKPVALKLGTGGVIKGWEEVLRVMNAGAQVQMVVPANLAFGDKGICIENGECLVKPGMDVRYDLKLNRIAPT 363
+VFTTDGGVK+IVLKEG GP+A+DGDFCVVEFTGFLPDG VFDASN+PGRKP+A +LG VIKGWEEVLR+MNAGA+VQMVVPA++AFGDKGICI+NG+CLVKPGMDVRYDL+L R+APT
Sbjct: 90 RVFTTDGGVKFIVLKEGTGPVARDGDFCVVEFTGFLPDGAVFDASNAPGRKPIAFQLGKRQVIKGWEEVLRLMNAGAEVQMVVPADMAFGDKGICIDNGDCLVKPGMDVRYDLQLKRVAPT 210
BLAST of mRNA_H-elongata_contig165388.4117.1 vs. uniprot
Match: A0A7S2UZW0_9STRA (Peptidylprolyl isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZW0_9STRA) HSP 1 Score: 160 bits (404), Expect = 1.380e-47 Identity = 69/120 (57.50%), Postives = 94/120 (78.33%), Query Frame = 1
Query: 1 KVFTTDGGVKYIVLKEGEGPLAQDGDFCVVEFTGFLPDGRVFDASNSPGRKPVALKLGTGGVIKGWEEVLRVMNAGAQVQMVVPANLAFGDKGICIENGECLVKPGMDVRYDLKLNRIAP 360
KV TDGGVK++ +K+G GP + GD+C+V++ G+L DGR+FD+S PGRKP+A K G VI GWEEVL M AG +V+MVVPA+LA+G KGIC+E+GECL++P +++YDL L R+AP
Sbjct: 67 KVIETDGGVKFVEVKKGNGPRPRRGDYCIVDYVGYLSDGRIFDSSTGPGRKPLAFKFGGKQVIPGWEEVLPYMKAGGEVKMVVPASLAYGSKGICVEDGECLIQPDEELKYDLTLKRVAP 186
BLAST of mRNA_H-elongata_contig165388.4117.1 vs. uniprot
Match: A0A6S9M8W0_HETAK (Peptidylprolyl isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9M8W0_HETAK) HSP 1 Score: 158 bits (399), Expect = 8.180e-47 Identity = 68/119 (57.14%), Postives = 95/119 (79.83%), Query Frame = 1
Query: 1 KVFTTDGGVKYIVLKEGEGPLAQDGDFCVVEFTGFLPDGRVFDASNSPGRKPVALKLGTGGVIKGWEEVLRVMNAGAQVQMVVPANLAFGDKGICIENGECLVKPGMDVRYDLKLNRIA 357
++ TT GGVK+I +K+G GP + GD C+V++TG+LPD VFD+S++PGRKP+A KLG VI GWEEVL M+ GA+VQ VVPA LA+G KG+C+++GECL+KP D+++D+KL R+A
Sbjct: 68 EIETTPGGVKFIFIKQGSGPNPRKGDICLVDYTGYLPDNTVFDSSDAPGRKPLAFKLGARQVIPGWEEVLPYMSVGAEVQAVVPAKLAYGSKGVCLDSGECLIKPDTDLKFDIKLKRVA 186
BLAST of mRNA_H-elongata_contig165388.4117.1 vs. uniprot
Match: A0A835Z9V0_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9V0_9STRA) HSP 1 Score: 125 bits (315), Expect = 3.540e-34 Identity = 55/121 (45.45%), Postives = 82/121 (67.77%), Query Frame = 1
Query: 1 KVFTTDGGVKYIVLKEGEGPLAQDGDFCVVEFTGFLPDGRVFDASNSP--GRKPVALKLGTGGVIKGWEEVLRVMNAGAQVQMVVPANLAFGDKGICIENGECLVKPGMDVRYDLKLNRIA 357
KV+ TD G+ Y+V KEG GP +DGD +++ G+L +G+ FD ++ GRKP KLG VI WEE++R MN GA+ +VVPA L +GDKG+C+ +GECLV P +++ + L+++A
Sbjct: 60 KVYETDNGILYVVRKEGSGPRPRDGDLVAIKYIGYLNNGKAFDINDGSVAGRKPTVFKLGAKQVIPAWEEIVRYMNPGAEYNIVVPAKLGYGDKGVCVGDGECLVPPNETLKFTIILDKVA 180
BLAST of mRNA_H-elongata_contig165388.4117.1 vs. uniprot
Match: A0A7S1TJB1_9RHOD (Peptidylprolyl isomerase n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TJB1_9RHOD) HSP 1 Score: 125 bits (313), Expect = 1.100e-33 Identity = 57/120 (47.50%), Postives = 79/120 (65.83%), Query Frame = 1
Query: 1 KVFTTDGGVKYIVLKEGEGPLAQDGDFCVVEFTGFLPDGRVFDASNSPGRKPVALKLGTGGVIKGWEEVLRVMNAGAQVQMVVPANLAFGDKGICIENGECLVKPGMDVRYDLKLNRIAP 360
K T G++Y + G G Q+GD VV++ G+L +G+VFD S SPGRKP+A LG VI WEE L M +G +++VP +LA+GD+G+C+ +GECL+ P + YDLKL RIAP
Sbjct: 77 KFVKTSSGLRYADVVTGSGSSPQEGDIVVVDYVGYLSNGQVFDNSKSPGRKPLAFPLGQRKVIPAWEEALSTMKSGGTRKIIVPPSLAYGDRGVCVPSGECLIPPNETLEYDLKLLRIAP 196
BLAST of mRNA_H-elongata_contig165388.4117.1 vs. uniprot
Match: W7U710_9STRA (Peptidylprolyl isomerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U710_9STRA) HSP 1 Score: 124 bits (311), Expect = 3.380e-33 Identity = 57/119 (47.90%), Postives = 81/119 (68.07%), Query Frame = 1
Query: 1 KVFTTDGGVKYIVLKEGEGPLAQDGDFCVVEFTGFLPDGRVFDASNSPGRKPVALKLGTGGVIKGWEEVLRVMNAGAQVQMVVPANLAFGDKGICIENGECLVKPGMDVRYDLKLNRIA 357
K+ T GVKY+ +K GEG + GD+ ++ + G L DG +FD + PG+KP+A K+G VI G EE L M AG + Q++VPA+LAFG+KG+C E GECLV P +V+Y++ L R+A
Sbjct: 93 KIRETPNGVKYVDVKVGEGESPRGGDYVIITYIGQLSDGTIFDGLHGPGKKPLAFKIGAKQVIPGLEEALLSMQAGGERQLLVPADLAFGEKGVCTEKGECLVPPNTNVKYNVILKRVA 211
BLAST of mRNA_H-elongata_contig165388.4117.1 vs. uniprot
Match: A0A7S3NK27_9STRA (Peptidylprolyl isomerase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NK27_9STRA) HSP 1 Score: 123 bits (309), Expect = 4.550e-33 Identity = 60/129 (46.51%), Postives = 84/129 (65.12%), Query Frame = 1
Query: 4 VFTTDGGVKYIVLKEGEGPLAQ-----------DGDFCVVEFTGFLPDGRVFDASNSPGRKPVALKLGTGGVIKGWEEVLRVMNAGAQVQMVVPANLAFGDKGICIENGECLVKPGMDVRYDLKLNRIA 357
+ TT GGVKY +LKEG P A G FC+V++TGFLP G VFD++ S GRKP+A KLG VI G E+++ M G +VQ ++PA LA+G+KG+C E+ +CL+ P D++Y ++L R A
Sbjct: 68 IRTTKGGVKYRILKEGACPTADPLGLAGSCTPTQGSFCIVDYTGFLPSGAVFDSTESKGRKPLAFKLGEKQVIVGIEQLVSQMKPGEEVQALIPAELAYGEKGVCTEDKDCLIPPNTDLKYFVRLVRTA 196
BLAST of mRNA_H-elongata_contig165388.4117.1 vs. uniprot
Match: A0A7S1FTT1_9STRA (Peptidylprolyl isomerase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FTT1_9STRA) HSP 1 Score: 123 bits (308), Expect = 5.040e-33 Identity = 56/119 (47.06%), Postives = 82/119 (68.91%), Query Frame = 1
Query: 4 VFTTDGGVKYIVLKEGEGPLAQDGDFCVVEFTGFLPDGRVFDASNSPG-RKPVALKLGTGGVIKGWEEVLRVMNAGAQVQMVVPANLAFGDKGICIENGECLVKPGMDVRYDLKLNRIA 357
++ T GVKY V E GP+ GDF VVE+TG+L +G++FDA+++ G R + KL TG VI G +E++ M G +VQ ++P LA+GDKG+C+ENGECL+KPG + YD+ L + +
Sbjct: 69 IYNTPKGVKYAVTAESNGPVPLPGDFVVVEYTGYLSNGQIFDATHATGKRNELLFKLNTGSVIPGLDEMVGEMKVGQKVQAIIPPALAYGDKGVCLENGECLIKPGSTLVYDILLKKTS 187
BLAST of mRNA_H-elongata_contig165388.4117.1 vs. uniprot
Match: A0A8J2WS77_9STRA (Peptidylprolyl isomerase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WS77_9STRA) HSP 1 Score: 122 bits (307), Expect = 6.050e-33 Identity = 55/129 (42.64%), Postives = 87/129 (67.44%), Query Frame = 1
Query: 4 VFTTDGGVKYIVLKEGEGPLAQDG-----------DFCVVEFTGFLPDGRVFDASNSPGRKPVALKLGTGGVIKGWEEVLRVMNAGAQVQMVVPANLAFGDKGICIENGECLVKPGMDVRYDLKLNRIA 357
V TT GG KY+++KEG PL + +++TGFLP+G+VFD++ G KP++ +LG V+ G E+V+ M G +VQ ++PA+LA+GDKG+C ++GECL+KPG +++Y ++LNR+A
Sbjct: 53 VRTTKGGAKYVIVKEGSCPLIDPSGALGSCYPRPESYITIDYTGFLPNGQVFDSTEKKGGKPLSFRLGERQVVPGIEQVVAQMKPGEEVQALLPASLAYGDKGVCTDDGECLIKPGTNLKYFIRLNRVA 181
BLAST of mRNA_H-elongata_contig165388.4117.1 vs. uniprot
Match: A0A7S2FVU9_9STRA (Peptidylprolyl isomerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FVU9_9STRA) HSP 1 Score: 120 bits (302), Expect = 6.730e-32 Identity = 57/129 (44.19%), Postives = 83/129 (64.34%), Query Frame = 1
Query: 4 VFTTDGGVKYIVLKEGEGPLA-----------QDGDFCVVEFTGFLPDGRVFDASNSPGRKPVALKLGTGGVIKGWEEVLRVMNAGAQVQMVVPANLAFGDKGICIENGECLVKPGMDVRYDLKLNRIA 357
+ TT GGVKY V+K+G+ P A + G C+++FTGFLPDG VFD++ G KP+A +LG VI G E+V+ M G +VQ +P+ LA+G KG+C +GECL+ P D++Y ++L R+A
Sbjct: 78 IRTTKGGVKYAVVKDGKCPTADPTGLAGSCDPKTGSLCIIDFTGFLPDGSVFDSTERKGGKPLAFRLGEKQVIIGIEQVVSQMRTGEEVQAKIPSELAYGTKGVCTADGECLIPPNTDLKYFIRLKRVA 206 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig165388.4117.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig165388.4117.1 >prot_H-elongata_contig165388.4117.1 ID=prot_H-elongata_contig165388.4117.1|Name=mRNA_H-elongata_contig165388.4117.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=123bp KVFTTDGGVKYIVLKEGEGPLAQDGDFCVVEFTGFLPDGRVFDASNSPGRback to top mRNA from alignment at H-elongata_contig165388:325..1290+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig165388.4117.1 ID=mRNA_H-elongata_contig165388.4117.1|Name=mRNA_H-elongata_contig165388.4117.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=966bp|location=Sequence derived from alignment at H-elongata_contig165388:325..1290+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig165388:325..1290+ >mRNA_H-elongata_contig165388.4117.1 ID=mRNA_H-elongata_contig165388.4117.1|Name=mRNA_H-elongata_contig165388.4117.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=738bp|location=Sequence derived from alignment at H-elongata_contig165388:325..1290+ (Himanthalia elongata Himel1 dioecious)back to top |