mRNA_H-elongata_contig165206.4105.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig165206.4105.1 vs. uniprot
Match: D8LTV6_ECTSI (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTV6_ECTSI) HSP 1 Score: 244 bits (624), Expect = 2.890e-78 Identity = 117/147 (79.59%), Postives = 132/147 (89.80%), Query Frame = 1
Query: 1 LENLPPVGHDAYDVGTVERALMAAYKSADDYVTTKTPYANEGSCAVSVTVHCDRQGKASLISCNLGDSSRAVLSRGGKALDLTEDHKPNAPKELERIYRHDGMVTWEGLECSEGLQIEGTGVYRINGNLAVARAIGDIDYRPWVSGE 441
+++LPP G D Y + TV+ AL +A+K ADDYV T+TPY NEGSCAVSVT+HCDR+GK S+ISCNLGDS RAVLSRGGKALDLTEDHKPNAP+E+ERIYRHDGMVTWEG ECS GLQIEGTGVYRING+LAVARAIGDIDYRPW+S E
Sbjct: 90 MDHLPP-GDDVYGLETVQEALRSAFKCADDYVITQTPYGNEGSCAVSVTIHCDREGKVSIISCNLGDS-RAVLSRGGKALDLTEDHKPNAPREMERIYRHDGMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAE 234
BLAST of mRNA_H-elongata_contig165206.4105.1 vs. uniprot
Match: A0A6H5KKR9_9PHAE (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKR9_9PHAE) HSP 1 Score: 240 bits (613), Expect = 2.140e-74 Identity = 115/147 (78.23%), Postives = 131/147 (89.12%), Query Frame = 1
Query: 1 LENLPPVGHDAYDVGTVERALMAAYKSADDYVTTKTPYANEGSCAVSVTVHCDRQGKASLISCNLGDSSRAVLSRGGKALDLTEDHKPNAPKELERIYRHDGMVTWEGLECSEGLQIEGTGVYRINGNLAVARAIGDIDYRPWVSGE 441
+++LPP G D Y + TV+ AL +A+K ADDYV T+TPY NEGSCAVSVT+HCD++GK S+ISCNLGDS RAVLSRGGKALDLTEDHKPNAP+E+ERIYRH GMVTWEG ECS GLQIEGTGVYRING+LAVARAIGDIDYRPW+S E
Sbjct: 284 MDHLPP-GDDVYGLETVQEALRSAFKCADDYVITQTPYGNEGSCAVSVTIHCDKEGKVSIISCNLGDS-RAVLSRGGKALDLTEDHKPNAPREMERIYRHRGMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAE 428
BLAST of mRNA_H-elongata_contig165206.4105.1 vs. uniprot
Match: A0A835Z7U5_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7U5_9STRA) HSP 1 Score: 128 bits (322), Expect = 6.100e-33 Identity = 73/132 (55.30%), Postives = 90/132 (68.18%), Query Frame = 1
Query: 55 RALMAAYKSADDYVTTKTPYANEGSCAVSVTVH---CDRQGKASLISCNLGDSSRAVLSRGGKALDLTEDHKPNAPKELERIYRHDGMVTWEGLECSEGLQIEGTGVYRINGNLAVARAIGDIDYRPWVSGE 441
+AL AA+K+ DD V ++ +GS AV+V +H G S+I+ N+GDS RAVL R GKA+++T+DHKPNA EL+RI G V W G EG IEGTGVYRINGNLAVARAIGD RP+VSGE
Sbjct: 125 QALKAAFKTVDDEVLKVRHWSYQGSTAVAVVIHPTVAGGNGNCSIITANVGDS-RAVLCRRGKAVEITKDHKPNATAELDRIEALGGNVRWFGFIDPEGRPIEGTGVYRINGNLAVARAIGDSSERPFVSGE 255
BLAST of mRNA_H-elongata_contig165206.4105.1 vs. uniprot
Match: A0A8K1C3Y4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3Y4_PYTOL) HSP 1 Score: 115 bits (288), Expect = 1.490e-28 Identity = 68/143 (47.55%), Postives = 86/143 (60.14%), Query Frame = 1
Query: 13 PPVGHDAYDVGTVERALMAAYKSADDYVTTKTPYANEGSCAVSVTVHCDRQGKASLISCNLGDSSRAVLSRGGKALDLTEDHKPNAPKELERIYRHDGMVTWEGLECSEGLQIEGTGVYRINGNLAVARAIGDIDYRPWVSGE 441
P G+ +E L A D V ++ + +GS AV V +H D ++ S N+GDS RAV+SRGG+ ++LT DHKPN P EL RI + G V W G ++G IE G YRINGNLAVARAIGD D RP+VSGE
Sbjct: 49 PEEGNHTTSRSALEDMLRQAVDRVDADVIARSEWKYQGSTAVGVLLHGD-----AIFSFNVGDS-RAVMSRGGQVVELTRDHKPNDPIELTRIQKLGGSVKWHGYVDAQGEPIEPYGAYRINGNLAVARAIGDRDLRPYVSGE 185
BLAST of mRNA_H-elongata_contig165206.4105.1 vs. uniprot
Match: A0A4D9DDA2_9STRA (PPM-type phosphatase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DDA2_9STRA) HSP 1 Score: 117 bits (294), Expect = 6.270e-28 Identity = 72/145 (49.66%), Postives = 88/145 (60.69%), Query Frame = 1
Query: 49 VERALMAAYKSADDYVTTKTPYANEGSCAVSVTVHCD------------RQG--KASLISCNLGDSSRAVLSRGGKALDLTEDHKPNAPKELERIYRHDGMVTWEGLECSEGLQIEGTGVYRINGNLAVARAIGDIDYRPWVSGE 441
V AL A++ D+ V +A GS AV V +H + R G K +LI+ N+GDS RAVLSR G+A+DLT+DHKPN P ELER+ G V W GL +G +EG GVYRINGNLAVARA GD RP+VS E
Sbjct: 380 VTEALATAFRVVDEAVVKVRHWAYMGSTAVVVVIHAEEAKAKEGVEEGGRAGALKRTLIAANVGDS-RAVLSRRGQAVDLTDDHKPNKPSELERVKALGGTVRWYGLLEQDGSPMEGMGVYRINGNLAVARAFGDRSERPFVSSE 523
BLAST of mRNA_H-elongata_contig165206.4105.1 vs. uniprot
Match: A0A6G0XM49_9STRA (PPM-type phosphatase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XM49_9STRA) HSP 1 Score: 111 bits (277), Expect = 2.940e-26 Identity = 64/138 (46.38%), Postives = 83/138 (60.14%), Query Frame = 1
Query: 28 DAYDVGTVERALMAAYKSADDYVTTKTPYANEGSCAVSVTVHCDRQGKASLISCNLGDSSRAVLSRGGKALDLTEDHKPNAPKELERIYRHDGMVTWEGLECSEGLQIEGTGVYRINGNLAVARAIGDIDYRPWVSGE 441
D + + +E++L A++ AD + + + +GS A +V + D + S N+GDS RAVL R G+AL+LT DHKPN P E RI R G V W GL +G I G YRIN NLAVARA GD D RP+VSGE
Sbjct: 151 DTWSIEDIEQSLRLAFREADAAILDRREWLTQGSTATAVLLIDDL-----IWSMNVGDS-RAVLCRNGRALNLTRDHKPNDPIERARIERCGGRVQWHGLRDPKGQPIPDMGAYRINANLAVARAFGDSDQRPYVSGE 282
BLAST of mRNA_H-elongata_contig165206.4105.1 vs. uniprot
Match: A0A7S2CN51_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CN51_9STRA) HSP 1 Score: 101 bits (252), Expect = 4.150e-25 Identity = 49/87 (56.32%), Postives = 64/87 (73.56%), Query Frame = 1
Query: 181 ISCNLGDSSRAVLSRGGKALDLTEDHKPNAPKELERIYRHDGMVTWEGLECSEGLQIEGTGVYRINGNLAVARAIGDIDYRPWVSGE 441
++ N+GDS R VLSR G+A+DLT DHKPN P EL RI G V W G ++G ++GTGVYR+NGNLAV+RA+GD +P++SGE
Sbjct: 1 VTANVGDS-RVVLSRRGQAVDLTRDHKPNCPSELARIQALGGNVHWHGFYHADGRPMDGTGVYRVNGNLAVSRAVGDSTEKPFISGE 86
BLAST of mRNA_H-elongata_contig165206.4105.1 vs. uniprot
Match: A0A024TM43_9STRA (PPM-type phosphatase domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TM43_9STRA) HSP 1 Score: 108 bits (269), Expect = 5.440e-25 Identity = 64/147 (43.54%), Postives = 86/147 (58.50%), Query Frame = 1
Query: 1 LENLPPVGHDAYDVGTVERALMAAYKSADDYVTTKTPYANEGSCAVSVTVHCDRQGKASLISCNLGDSSRAVLSRGGKALDLTEDHKPNAPKELERIYRHDGMVTWEGLECSEGLQIEGTGVYRINGNLAVARAIGDIDYRPWVSGE 441
L NL P D +++ +E +L A+++ D + + + +GS A +V + D + S N+GDS RAVL R G+A++LT DHKPN P E R+ + G V W GL G I G YRIN NLAVARA GD D RP+VSGE
Sbjct: 145 LANLGPA-KDTWNLDEIETSLRDAFRTVDAVILERREWIAQGSTATAVLLMDDL-----IWSMNVGDS-RAVLCRNGRAVNLTRDHKPNDPMERSRVEKAGGRVQWHGLRDPHGRPIVDMGAYRINSNLAVARAFGDGDQRPYVSGE 284
BLAST of mRNA_H-elongata_contig165206.4105.1 vs. uniprot
Match: A0A2D4CJK3_PYTIN (PPM-type phosphatase domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CJK3_PYTIN) HSP 1 Score: 105 bits (261), Expect = 7.510e-25 Identity = 61/131 (46.56%), Postives = 80/131 (61.07%), Query Frame = 1
Query: 49 VERALMAAYKSADDYVTTKTPYANEGSCAVSVTVHCDRQGKASLISCNLGDSSRAVLSRGGKALDLTEDHKPNAPKELERIYRHDGMVTWEGLECSEGLQIEGTGVYRINGNLAVARAIGDIDYRPWVSGE 441
VE+ L A D V + + +GS AV V ++ D S+ S N+GDS RAV+SRGG+ ++LT DHKPN P E +RI G V W G ++G+ IE G R+NGN AVARAIGD D RP+V G+
Sbjct: 61 VEKLLREAVAKVDADVVARPEWKYQGSTAVGVLLYDD-----SIFSINVGDS-RAVMSRGGQVVELTRDHKPNDPVERQRIEALGGNVRWYGYVDAQGVPIEPYGAXRVNGNXAVARAIGDSDLRPFVXGD 185
BLAST of mRNA_H-elongata_contig165206.4105.1 vs. uniprot
Match: A0A485L3M8_9STRA (Aste57867_15235 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L3M8_9STRA) HSP 1 Score: 106 bits (265), Expect = 1.650e-24 Identity = 61/137 (44.53%), Postives = 82/137 (59.85%), Query Frame = 1
Query: 28 DAYDVGTVERALMAAYKSADDYVTTKTPYANEGSCAVSVTVHCDRQGKASLISCNLGDSSRAVLSRGGKALDLTEDHKPNAPKELERIYRHDGMVTWEGLECSEGLQIEGTGVYRINGNLAVARAIGDIDYRPWVSG 438
D + + ++ L AA+K+AD + + + +GS A +V + D + S N+GDS RAVL R G+AL+LT DHKPN P+E +RI G V W GL + G + G YRIN NLAVARA GD D RP+V G
Sbjct: 149 DTWSLDEIDARLRAAFKAADTAILARKEWREQGSTATAVFLIDDL-----IWSMNVGDS-RAVLCRDGRALNLTRDHKPNDPEERQRIEDAGGKVRWHGLRDAAGKPVVDMGAYRINSNLAVARAFGDGDQRPYVCG 279 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig165206.4105.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig165206.4105.1 >prot_H-elongata_contig165206.4105.1 ID=prot_H-elongata_contig165206.4105.1|Name=mRNA_H-elongata_contig165206.4105.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=147bp LENLPPVGHDAYDVGTVERALMAAYKSADDYVTTKTPYANEGSCAVSVTVback to top mRNA from alignment at H-elongata_contig165206:80..1177+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig165206.4105.1 ID=mRNA_H-elongata_contig165206.4105.1|Name=mRNA_H-elongata_contig165206.4105.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1098bp|location=Sequence derived from alignment at H-elongata_contig165206:80..1177+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig165206:80..1177+ >mRNA_H-elongata_contig165206.4105.1 ID=mRNA_H-elongata_contig165206.4105.1|Name=mRNA_H-elongata_contig165206.4105.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=882bp|location=Sequence derived from alignment at H-elongata_contig165206:80..1177+ (Himanthalia elongata Himel1 dioecious)back to top |