mRNA_H-elongata_contig164905.4091.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig164905.4091.1 vs. uniprot
Match: UPI001E1E1C50 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1C50) HSP 1 Score: 65.5 bits (158), Expect = 4.630e-10 Identity = 42/114 (36.84%), Postives = 65/114 (57.02%), Query Frame = 1
Query: 1 KAYMGVTAHFISEGSADITRCTIACNEFPGSHTAERIAAELTTVMKQYEIETSVVAITTDTAANIKKAGTQLLPQQEWHGCAAHKIDLALRPVLEEPSIKQTLAKHNKMTKHVH 342
++Y TAHF+ + ++ + + GSHT+E IA L T ++++ T V +TTD AAN KKA Q+L + + GC H+I+L +R LE P I++ LAK K+ H
Sbjct: 206 ESYNTTTAHFLDK-DWNMKTAILGTKKMEGSHTSENIAESLMTTKNEWKLPT--VVVTTDNAANEKKA-FQILKWERF-GCYGHRINLIVRNALEVPEIRKILAKSRKLVTFFH 314
BLAST of mRNA_H-elongata_contig164905.4091.1 vs. uniprot
Match: UPI0018D0C22E (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D0C22E) HSP 1 Score: 64.7 bits (156), Expect = 8.620e-10 Identity = 35/97 (36.08%), Postives = 59/97 (60.82%), Query Frame = 1
Query: 1 KAYMGVTAHFISEGSADITRCTIACNEFPGSHTAERIAAELTTVMK-QYEIETSVVAITTDTAANIKKAGTQLLPQQEWHGCAAHKIDLALRPVLEE 288
K+YM +T HFI E T++ E +HT+E +A E+ +++ ++ I ++ +TTD AANIKKA +L Q+ H CAAH ++L ++ L++
Sbjct: 203 KSYMTLTIHFIHENK--FKTLTLSTREVKDAHTSENLAREMKDILETEWNILDKIICVTTDNAANIKKAVIDIL-QKRHHSCAAHTLNLVVQDTLKD 296
BLAST of mRNA_H-elongata_contig164905.4091.1 vs. uniprot
Match: UPI001F8DAAAB (Uncharacterized protein n=1 Tax=Spodoptera exigua TaxID=7107 RepID=UPI001F8DAAAB) HSP 1 Score: 63.9 bits (154), Expect = 1.300e-9 Identity = 34/97 (35.05%), Postives = 59/97 (60.82%), Query Frame = 1
Query: 1 KAYMGVTAHFISEGSADITRCTIACNEFPGSHTAERIAAELTTVMK-QYEIETSVVAITTDTAANIKKAGTQLLPQQEWHGCAAHKIDLALRPVLEE 288
K+YM +T HFI +G T++ E +HT+E +A E+ + + ++ I ++ +TTD AANIKKA +L Q+ H CAAH ++L ++ +++
Sbjct: 209 KSYMTLTIHFIYDGK--FKTLTLSTREIKDTHTSENLAREMKDICETEWNILDKIICVTTDNAANIKKAVIDIL-QKRHHSCAAHTLNLVVQDTIKD 302
BLAST of mRNA_H-elongata_contig164905.4091.1 vs. uniprot
Match: A0A1A8J3D6_NOTKU (BED-type domain-containing protein (Fragment) n=1 Tax=Nothobranchius kuhntae TaxID=321403 RepID=A0A1A8J3D6_NOTKU) HSP 1 Score: 57.8 bits (138), Expect = 2.210e-7 Identity = 35/109 (32.11%), Postives = 60/109 (55.05%), Query Frame = 1
Query: 4 AYMGVTAHFISEGSADITRCTIACNEFPGSHTAERIAAELTTVMKQYEIETSVVAITTDTAANIKKAGTQLLPQQEWHGCAAHKIDLALRPVLE-EPSIKQTLAKHNKM 327
AY+ + HFI+E S ++T + FP +HTA IA L T+M+++ I++ ++ + TD AAN+ L + H C AH ++L +R L+ P ++ K K+
Sbjct: 126 AYLAINCHFINE-SDELTSMLLTVRSFPENHTAANIAKVLATLMEEWNIQSKLMCLVTDGAANMLACANNL-DARHIH-CIAHALNLVVRKALDLTPGLEDMRGKARKV 231
BLAST of mRNA_H-elongata_contig164905.4091.1 vs. uniprot
Match: UPI001C17C339 (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C17C339) HSP 1 Score: 53.9 bits (128), Expect = 1.320e-6 Identity = 31/92 (33.70%), Postives = 47/92 (51.09%), Query Frame = 1
Query: 7 YMGVTAHFISEGSADITRCTIACNEFPGSHTAERIAAELTTVMKQYEIETSVVAITTDTAANIKKAGTQLLPQQEWHGCAAHKIDLALRPVL 282
Y+GVT +I + ++ T+ N HTA+ +A L V ++ + V ITTD AAN+KKA + W GC+AH + L + L
Sbjct: 30 YIGVTCSYI-DTKFNLNEITLTVNYVRYLHTAQHVAESLKEVFNEWNLRDKVFTITTDNAANMKKAIASM-SNIRWQGCSAHTLQLIVGKAL 119
BLAST of mRNA_H-elongata_contig164905.4091.1 vs. uniprot
Match: UPI001C9C677A (uncharacterized protein LOC122407372 n=1 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9C677A) HSP 1 Score: 55.5 bits (132), Expect = 1.460e-6 Identity = 30/69 (43.48%), Postives = 40/69 (57.97%), Query Frame = 1
Query: 1 KAYMGVTAHFISEGSADITRCTIACNEFPGSHTAERIAAELTTVMKQYEIETS-VVAITTDTAANIKKA 204
+ ++GVTAH+I + IAC FPGSHTAERIA L + + + + T VVA TD +N KA
Sbjct: 44 RRFLGVTAHWIDNATLTRQSFAIACQRFPGSHTAERIAEVLLDINESFGLNTEKVVATVTDNGSNFAKA 112
BLAST of mRNA_H-elongata_contig164905.4091.1 vs. uniprot
Match: UPI001C1AB16C (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C1AB16C) HSP 1 Score: 54.7 bits (130), Expect = 2.730e-6 Identity = 31/94 (32.98%), Postives = 48/94 (51.06%), Query Frame = 1
Query: 1 KAYMGVTAHFISEGSADITRCTIACNEFPGSHTAERIAAELTTVMKQYEIETSVVAITTDTAANIKKAGTQLLPQQEWHGCAAHKIDLALRPVL 282
+ Y+GVT +I + ++ T+ N HTA+ +A L V ++ + V ITTD AAN+KKA + W GC+AH + L + L
Sbjct: 172 QGYIGVTCSYI-DTKFNLNEITLTVNYVRYPHTAQHVAESLEEVFNEWNLRDKVFTITTDNAANMKKAIASM-SNIRWQGCSAHTLQLIVGKAL 263
BLAST of mRNA_H-elongata_contig164905.4091.1 vs. uniprot
Match: UPI001C089F98 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Alosa sapidissima TaxID=34773 RepID=UPI001C089F98) HSP 1 Score: 54.3 bits (129), Expect = 3.760e-6 Identity = 27/68 (39.71%), Postives = 40/68 (58.82%), Query Frame = 1
Query: 1 KAYMGVTAHFISEGSADITRCTIACNEFPGSHTAERIAAELTTVMKQYEIETSVVAITTDTAANIKKA 204
++++GVTAH+I EG+ + +AC GSHT + +A L + QY I VV TTD+ +N KA
Sbjct: 209 QSFIGVTAHWIDEGTLERRSAALACKRLKGSHTFDVVAGALDEIHCQYRIRGKVVRTTTDSGSNFIKA 276
BLAST of mRNA_H-elongata_contig164905.4091.1 vs. uniprot
Match: A0A6G0W4I3_APHCR (Zinc finger BED domain-containing protein 4-like n=1 Tax=Aphis craccivora TaxID=307492 RepID=A0A6G0W4I3_APHCR) HSP 1 Score: 54.3 bits (129), Expect = 3.810e-6 Identity = 32/97 (32.99%), Postives = 52/97 (53.61%), Query Frame = 1
Query: 1 KAYMGVTAHFISEGSADITRCTIACNEFPGSHTAERIAAELTTVMKQYEIETS-VVAITTDTAANIKKAGTQLLPQQEWHGCAAHKIDLALRPVLEE 288
K+Y+G+T HFIS G + TI + HT++ +A L + + I VVA+ +D+AANIKK T+L C AH ++L + +++
Sbjct: 215 KSYLGITIHFISSGQLESV--TIGVVQLFEGHTSKYLAEVLDNCLLNWNISNEKVVAVVSDSAANIKKTVTELYGCDRQISCLAHTVNLVVEKAIDK 309
BLAST of mRNA_H-elongata_contig164905.4091.1 vs. uniprot
Match: A0A8J9UAP6_BRAAE (Hypothetical protein n=1 Tax=Brassicogethes aeneus TaxID=1431903 RepID=A0A8J9UAP6_BRAAE) HSP 1 Score: 53.9 bits (128), Expect = 5.100e-6 Identity = 30/106 (28.30%), Postives = 60/106 (56.60%), Query Frame = 1
Query: 4 AYMGVTAHFISEGSADITRCTIACNEFPG-SHTAERIAAELTTVMKQYEIETSVVAITTDTAANIKKAGTQLLPQQEWHGCAAHKIDLALRPVLEE-PSIKQTLAK 315
+Y+ +T HF+ + + + ++ NE HT + IAA+++ ++ +++++ +V I +D AN+K A T L + H C AH ++L + L E P +K+ + K
Sbjct: 233 SYLSLTCHFVHDMT--LHSRVLSVNEMSSIHHTGQNIAADISAILTEWDLDAKIVTIVSDNGANVKNAITVHLRKYH-HPCVAHTLNLISKEALNENPELKKLITK 335 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig164905.4091.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig164905.4091.1 >prot_H-elongata_contig164905.4091.1 ID=prot_H-elongata_contig164905.4091.1|Name=mRNA_H-elongata_contig164905.4091.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=111bp MGVTAHFISEGSADITRCTIACNEFPGSHTAERIAAELTTVMKQYEIETSback to top mRNA from alignment at H-elongata_contig164905:1079..1420- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig164905.4091.1 ID=mRNA_H-elongata_contig164905.4091.1|Name=mRNA_H-elongata_contig164905.4091.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=342bp|location=Sequence derived from alignment at H-elongata_contig164905:1079..1420- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig164905:1079..1420- >mRNA_H-elongata_contig164905.4091.1 ID=mRNA_H-elongata_contig164905.4091.1|Name=mRNA_H-elongata_contig164905.4091.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=666bp|location=Sequence derived from alignment at H-elongata_contig164905:1079..1420- (Himanthalia elongata Himel1 dioecious)back to top |