mRNA_H-elongata_contig162790.3982.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig162790.3982.1 vs. uniprot
Match: A0A2Z4C3U8_SACJA (Mannitol-1-phosphate dehydrogenase 1 n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2Z4C3U8_SACJA) HSP 1 Score: 111 bits (277), Expect = 3.030e-27 Identity = 51/55 (92.73%), Postives = 55/55 (100.00%), Query Frame = 1
Query: 1 QVVILQPPPMAPLPAFAGENVKVPMTYGEANYFCRRKITMVNGMHTTLAFMTLCR 165
+VVILQPPPMAPLPAFAG+NVKVPMTYGEANYFCRRKITMVNGMHTTLAF+TLC+
Sbjct: 361 EVVILQPPPMAPLPAFAGDNVKVPMTYGEANYFCRRKITMVNGMHTTLAFLTLCK 415
BLAST of mRNA_H-elongata_contig162790.3982.1 vs. uniprot
Match: D7FMJ8_ECTSI (Mannitol 1-phosphate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMJ8_ECTSI) HSP 1 Score: 103 bits (258), Expect = 1.110e-24 Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 1
Query: 1 QVVILQPPPMAPLPAFAGENVKVPMTYGEANYFCRRKITMVNGMHTTLAFMTLCR 165
+VVILQPP APLPAFAG+NV VPMTYGEANYFCRRKITMVNGMHTTLAF+TLCR
Sbjct: 321 EVVILQPPVAAPLPAFAGDNVMVPMTYGEANYFCRRKITMVNGMHTTLAFITLCR 375
BLAST of mRNA_H-elongata_contig162790.3982.1 vs. uniprot
Match: B7ZGN5_9PHAE (Mannitol-1-phosphate dehydrogenase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGN5_9PHAE) HSP 1 Score: 93.6 bits (231), Expect = 1.650e-22 Identity = 42/45 (93.33%), Postives = 45/45 (100.00%), Query Frame = 1
Query: 31 APLPAFAGENVKVPMTYGEANYFCRRKITMVNGMHTTLAFMTLCR 165
APLPAFAG+NVKVPMTYGEANYFCRRKITMVNGMHTTLAF+TLC+
Sbjct: 4 APLPAFAGDNVKVPMTYGEANYFCRRKITMVNGMHTTLAFLTLCK 48
BLAST of mRNA_H-elongata_contig162790.3982.1 vs. uniprot
Match: D8LI09_ECTSI (Mannitol 1-phosphate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI09_ECTSI) HSP 1 Score: 77.8 bits (190), Expect = 2.220e-15 Identity = 34/56 (60.71%), Postives = 45/56 (80.36%), Query Frame = 1
Query: 1 QVVILQPPPMAPLPAFAGENVKVPMTYGEANYFCRRKITMVNGMHTTLAFMTLCRL 168
++V++ PP APLP F G++V++P EA YFCRRKI +VNGMHTTLAF+TLC+L
Sbjct: 338 EIVVIAPPQGAPLPPFKGDHVQIPRIPAEAEYFCRRKILLVNGMHTTLAFITLCKL 393
BLAST of mRNA_H-elongata_contig162790.3982.1 vs. uniprot
Match: A0A0G4I719_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I719_9ALVE) HSP 1 Score: 77.0 bits (188), Expect = 4.160e-15 Identity = 34/55 (61.82%), Postives = 43/55 (78.18%), Query Frame = 1
Query: 1 QVVILQPPPMAPLPAFAGENVKVPMTYGEANYFCRRKITMVNGMHTTLAFMTLCR 165
++V+L PP AP PAF G NV++P+ +A YFC+RKI VNGMHTTLAFMTLC+
Sbjct: 353 EIVVLSPPEDAPRPAFVGGNVQIPILEAQARYFCQRKILCVNGMHTTLAFMTLCK 407
BLAST of mRNA_H-elongata_contig162790.3982.1 vs. uniprot
Match: A0A836CC36_9STRA (Mannitol 1-phosphate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC36_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 1.280e-13 Identity = 35/53 (66.04%), Postives = 41/53 (77.36%), Query Frame = 1
Query: 1 QVVILQPPPMAPLPAFAGENVKVPMTYGEANYFCRRKITMVNGMHTTLAFMTL 159
++VIL PP APLPAF G NV P + A+YFCRRKI +VNGMHTTLAFM+L
Sbjct: 322 EIVILNPPLGAPLPAFKGPNVMAPDSQATADYFCRRKIGLVNGMHTTLAFMSL 374
BLAST of mRNA_H-elongata_contig162790.3982.1 vs. uniprot
Match: A0A835YRM5_9STRA (Mannitol 1-phosphate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRM5_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 2.400e-13 Identity = 31/55 (56.36%), Postives = 41/55 (74.55%), Query Frame = 1
Query: 1 QVVILQPPPMAPLPAFAGENVKVPMTYGEANYFCRRKITMVNGMHTTLAFMTLCR 165
+VV++ PP APLP G+N++ P EA Y+C+RK+ MVNGMHT LAFMTLC+
Sbjct: 320 EVVVITPPKTAPLPPLGGDNIRWPKIAAEAEYWCQRKLLMVNGMHTCLAFMTLCK 374
BLAST of mRNA_H-elongata_contig162790.3982.1 vs. uniprot
Match: A0A7S4LFU9_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LFU9_9EUGL) HSP 1 Score: 70.5 bits (171), Expect = 8.410e-13 Identity = 33/52 (63.46%), Postives = 38/52 (73.08%), Query Frame = 1
Query: 4 VVILQPPPMAPLPAFAGENVKVPMTYGEANYFCRRKITMVNGMHTTLAFMTL 159
VV++ PP APLPAFAG V +P T A Y CRRK+ VNGMHTTLAF+TL
Sbjct: 383 VVVMSPPWCAPLPAFAGPTVAIPETQAAAQYLCRRKLLTVNGMHTTLAFLTL 434
BLAST of mRNA_H-elongata_contig162790.3982.1 vs. uniprot
Match: A0A0G4FY26_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FY26_9ALVE) HSP 1 Score: 68.9 bits (167), Expect = 2.920e-12 Identity = 33/55 (60.00%), Postives = 39/55 (70.91%), Query Frame = 1
Query: 1 QVVILQPPPMAPLPAFAGENVKVPMTYGEANYFCRRKITMVNGMHTTLAFMTLCR 165
++V+L PP A +PAF G NV P EA+YFC RK MVNGMHTTLAFMTL +
Sbjct: 314 EIVLLSPPEHAQMPAFRGNNVHCPEDEREAHYFCERKKLMVNGMHTTLAFMTLAK 368
BLAST of mRNA_H-elongata_contig162790.3982.1 vs. uniprot
Match: A0A7S3XNG1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNG1_HETAK) HSP 1 Score: 67.0 bits (162), Expect = 5.900e-12 Identity = 30/53 (56.60%), Postives = 36/53 (67.92%), Query Frame = 1
Query: 4 VVILQPPPMAPLPAFAGENVKVPMTYGEANYFCRRKITMVNGMHTTLAFMTLC 162
+V+ PP AP+P F G+ +P E +Y CRRK MVNGMHTTLAFMTLC
Sbjct: 39 IVVQAPPAWAPMPPFKGDAPLIPKIKAETSYLCRRKFMMVNGMHTTLAFMTLC 91 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig162790.3982.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig162790.3982.1 >prot_H-elongata_contig162790.3982.1 ID=prot_H-elongata_contig162790.3982.1|Name=mRNA_H-elongata_contig162790.3982.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=47bp MAPLPAFAGENVKVPMTYGEANYFCRRKITMVNGMHTTLAFMTLCRLback to top mRNA from alignment at H-elongata_contig162790:722..889- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig162790.3982.1 ID=mRNA_H-elongata_contig162790.3982.1|Name=mRNA_H-elongata_contig162790.3982.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=168bp|location=Sequence derived from alignment at H-elongata_contig162790:722..889- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig162790:722..889- >mRNA_H-elongata_contig162790.3982.1 ID=mRNA_H-elongata_contig162790.3982.1|Name=mRNA_H-elongata_contig162790.3982.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=282bp|location=Sequence derived from alignment at H-elongata_contig162790:722..889- (Himanthalia elongata Himel1 dioecious)back to top |