mRNA_H-elongata_contig16247.3966.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig16247.3966.1 vs. uniprot
Match: D8LEF0_ECTSI (Myosin light chain kinase (MLCK) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF0_ECTSI) HSP 1 Score: 362 bits (929), Expect = 1.500e-118 Identity = 173/238 (72.69%), Postives = 204/238 (85.71%), Query Frame = 1
Query: 1 EDDPKWFYMVLELMDGGELFDRIVEKTVYNEEEARDVCRVLLGAVKYIHDQGIVHRDLKPENLLLACKTDDASIRLADFGFACSVRDRLVTDQCGTPVYVAPEILWANPYGRSVDMWSTGVIIFIMLGGYPPFHDQDQRRLFRKIKAGNFKFEPKYWGEVSEEAKDLIRKLLMVDPSRRLTAEQAVNHPWLATSGSNLAINDLGVGLSKLRIFNATRKLRAAIQSVVVAKKIAKRLGI 714
+DDPK+FYMVLELM+GGELFDRIV+K YNE EARDVC L A+KY H QG+VHRDLKPENLLLA K+DD+SIRLADFGFA SV D VTDQCGTP YVAPEIL + PYG SVDMWS GVII+I+L GYPPFHD+DQ RL+RKIKAG+++F+P+YW +VS EAKDLIRKLL VDP+RRLTA +A HPWL+T+ NL +DLG GL KL+IFNATRKLRAAI+SV+++KKIA+ LG+
Sbjct: 446 QDDPKFFYMVLELMEGGELFDRIVQKQYYNEAEARDVCLTFLEAMKYTHGQGVVHRDLKPENLLLASKSDDSSIRLADFGFAVSVLDGYVTDQCGTPGYVAPEILRSRPYGTSVDMWSIGVIIYIILAGYPPFHDEDQNRLYRKIKAGHYRFDPEYWNDVSSEAKDLIRKLLTVDPTRRLTAAEACEHPWLSTARGNLTQHDLGAGLEKLKIFNATRKLRAAIRSVLLSKKIARDLGL 683
BLAST of mRNA_H-elongata_contig16247.3966.1 vs. uniprot
Match: D8LK21_ECTSI (Possible Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK21_ECTSI) HSP 1 Score: 344 bits (882), Expect = 2.870e-115 Identity = 164/239 (68.62%), Postives = 199/239 (83.26%), Query Frame = 1
Query: 1 EDDPKWFYMVLELMDGGELFDRIVEKTVYNEEEARDVCRVLLGAVKYIHDQGIVHRDLKPENLLLACKTDDASIRLADFGFACSVRDRLVTDQCGTPVYVAPEILWANPYGRSVDMWSTGVIIFIMLGGYPPFHDQDQRRLFRKIKAGNFKFEPKYWGEVSEEAKDLIRKLLMVDPSRRLTAEQAVNHPWLATSGSNLAINDLGVGLSKLRIFNATRKLRAAIQSVVVAKKIAKRLGIE 717
+DDP ++YMVLE M GGELFDRIV+K+ YNEEEARD+CRVLL +V+Y H+ GIVHRDLKPENLLL K DDA I+LADFGFACSV + V++QCG+P YVAPEIL A PYG SVDMWS GVII+ +LGGYPPFHD++Q RLFR+IKAG+FKF +YW S EAKDLIRKLL+VDP++R+TA QA HPWL T+G++LA ++LG L +LRIFNATRKLR AIQSV+ AKK+ K G++
Sbjct: 150 QDDPDYYYMVLENMAGGELFDRIVQKSYYNEEEARDLCRVLLDSVRYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRKLLLVDPAKRMTATQAAEHPWLLTTGASLAGHNLGKNLDQLRIFNATRKLRGAIQSVIAAKKLGKSFGLQ 388
BLAST of mRNA_H-elongata_contig16247.3966.1 vs. uniprot
Match: A0A6H5KCN7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN7_9PHAE) HSP 1 Score: 335 bits (858), Expect = 6.290e-114 Identity = 162/231 (70.13%), Postives = 191/231 (82.68%), Query Frame = 1
Query: 25 MVLELMDGGELFDRIVEKTVYNEEEARDVCRVLLGAVKYIHDQGIVHRDLKPENLLLACKTDDASIRLADFGFACSVRDRLVTDQCGTPVYVAPEILWANPYGRSVDMWSTGVIIFIMLGGYPPFHDQDQRRLFRKIKAGNFKFEPKYWGEVSEEAKDLIRKLLMVDPSRRLTAEQAVNHPWLATSGSNLAINDLGVGLSKLRIFNATRKLRAAIQSVVVAKKIAKRLGIE 717
MVLE M GGELFDRIV+KT YNEEEARD+CRVLL +VKY H+ GIVHRDLKPENLLL K DDA I+LADFGFACSV + V++QCG+P YVAPEIL A PYG SVDMWS GVII+ +LGGYPPFHD++Q RLFR+IKAG+FKF +YW S EAKDLIRKLL+VDP++R+TA QA HPWL T+G +LA ++LG L +LRIFNATRKLR AIQSV+ AKK+ K G++
Sbjct: 1 MVLENMAGGELFDRIVQKTYYNEEEARDLCRVLLDSVKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRKLLLVDPAKRMTATQAAEHPWLLTTGESLASHNLGKNLDQLRIFNATRKLRGAIQSVIAAKKLGKSFGLQ 231
BLAST of mRNA_H-elongata_contig16247.3966.1 vs. uniprot
Match: A0A6H5K8I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I6_9PHAE) HSP 1 Score: 346 bits (888), Expect = 2.500e-112 Identity = 166/225 (73.78%), Postives = 194/225 (86.22%), Query Frame = 1
Query: 4 DDPKWFYMVLELMDGGELFDRIVEKTVYNEEEARDVCRVLLGAVKYIHDQGIVHRDLKPENLLLACKTDDASIRLADFGFACSVRDRLVTDQCGTPVYVAPEILWANPYGRSVDMWSTGVIIFIMLGGYPPFHDQDQRRLFRKIKAGNFKFEPKYWGEVSEEAKDLIRKLLMVDPSRRLTAEQAVNHPWLATSGSNLAINDLGVGLSKLRIFNATRKLRAAIQSV 678
D+PK+FYMVLELM+GGELFDRIV+K YNE EARDVC +L A+KYIH QG+VHRDLKPENLLLA K+DD+SIRLADFGFA SV D VTDQCGTP YVAPEIL +PYG SVDMWS GVII+I+L GYPPF D+DQ RL+RKIKAG+++FEP+YW +VS EAKDLIRKLL+VDP+RRLTA +A HPWL+T+ NL +DLG GL KL+IFNATRKLRAAI++V
Sbjct: 442 DNPKFFYMVLELMEGGELFDRIVQKQYYNEAEARDVCLTILEAIKYIHGQGVVHRDLKPENLLLASKSDDSSIRLADFGFAVSVLDGYVTDQCGTPGYVAPEILRGHPYGTSVDMWSIGVIIYIILAGYPPFCDEDQHRLYRKIKAGHYRFEPEYWNDVSSEAKDLIRKLLIVDPTRRLTAAEACEHPWLSTARGNLTKHDLGAGLEKLKIFNATRKLRAAIRTV 666
BLAST of mRNA_H-elongata_contig16247.3966.1 vs. uniprot
Match: A0A6H5K8A8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8A8_9PHAE) HSP 1 Score: 323 bits (828), Expect = 1.970e-107 Identity = 155/239 (64.85%), Postives = 189/239 (79.08%), Query Frame = 1
Query: 1 EDDPKWFYMVLELMDGGELFDRIVEKTVYNEEEARDVCRVLLGAVKYIHDQGIVHRDLKPENLLLACKTDDASIRLADFGFACSVRDRLVTDQCGTPVYVAPEILWANPYGRSVDMWSTGVIIFIMLGGYPPFHDQDQRRLFRKIKAGNFKFEPKYWGEVSEEAKDLIRKLLMVDPSRRLTAEQAVNHPWLATSGSNLAINDLGVGLSKLRIFNATRKLRAAIQSVVVAKKIAKRLGIE 717
+DDP +Y+ +E M GGELFDRIV+K YNE+EARD+CR+LL AV+Y HD GIVHRDLKPENLLL + DDA+++LADFGFA S+ V+ QCGTP YVAPEIL A YG SVDMWS GVI++I+LGGYPPFHD++Q RLFRKIKAGNFKF P+YW S EAKDLIR+LL VDP +RLTA QAV HPWL + +L ++LGV L +LR+FNA RKLRAAI+SV+ + +A + IE
Sbjct: 126 KDDPDNYYVSIEYMRGGELFDRIVKKAFYNEKEARDLCRILLDAVRYCHDLGIVHRDLKPENLLLTSQHDDANVKLADFGFARSIMGGFVSTQCGTPGYVAPEILRAESYGTSVDMWSIGVIVYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWQSTSSEAKDLIRRLLTVDPKKRLTAAQAVTHPWLLSKDDDLLKHNLGVNLEQLRLFNARRKLRAAIKSVLATQMMAGKFNIE 364
BLAST of mRNA_H-elongata_contig16247.3966.1 vs. uniprot
Match: A0A835YZ60_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ60_9STRA) HSP 1 Score: 310 bits (794), Expect = 1.520e-102 Identity = 146/227 (64.32%), Postives = 184/227 (81.06%), Query Frame = 1
Query: 19 FYMVLELMDGGELFDRIVEKTVYNEEEARDVCRVLLGAVKYIHDQGIVHRDLKPENLLLACKTDDASIRLADFGFACSVRDRLVTDQCGTPVYVAPEILWANPYGRSVDMWSTGVIIFIMLGGYPPFHDQDQRRLFRKIKAGNFKFEPKYWGEVSEEAKDLIRKLLMVDPSRRLTAEQAVNHPWLATSGSNLAINDLGVGLSKLRIFNATRKLRAAIQSVVVAKKIA 699
+Y+++E M GGELFDRIV+K Y E+EARD+C++LL A+KY HD+ IVHRDLKPENLLL DDASI+LADFGFA ++ +VT QCGTP YVAPEIL PYG SVDMWS GVII+I+LGGYPPFHD++Q RLFRKI+AG F+F +YWG +S +AKDLI +LL VD RLTA +AV+HPWL TS ++LA +LG L +L++FNA RKLRAAI+SV+VA+++A
Sbjct: 114 YYVIIEYMRGGELFDRIVKKQFYTEKEARDLCKILLDAIKYCHDRDIVHRDLKPENLLLTSNDDDASIKLADFGFAKALNGSMVTTQCGTPAYVAPEILRHRPYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIRAGKFEFHNEYWGSISSDAKDLISRLLTVDQHSRLTAREAVSHPWLLTSDTDLAARNLGKNLEQLKLFNARRKLRAAIKSVLVARRMA 340
BLAST of mRNA_H-elongata_contig16247.3966.1 vs. uniprot
Match: D8LGW1_ECTSI (Ca2+/calmodulin-dependent protein kinase II n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGW1_ECTSI) HSP 1 Score: 309 bits (792), Expect = 1.450e-97 Identity = 148/236 (62.71%), Postives = 183/236 (77.54%), Query Frame = 1
Query: 1 EDDPKWFYMVLELMDGGELFDRIVEKTVYNEEEARDVCRVLLGAVKYIHDQGIVHRDLKPENLLLACKTDDASIRLADFGFACSVRDRLVTDQCGTPVYVAPEILWANPYGRSVDMWSTGVIIFIMLGGYPPFHDQDQRRLFRKIKAGNFKFEPKYWGEVSEEAKDLIRKLLMVDPSRRLTAEQAVNHPWLATSGSNLAINDLGVGLSKLRIFNATRKLRAAIQSVVVAKKIAKRL 708
EDDPK+FY+ LELM+GGEL DRIV+KT YNE EARDVC LL AV+Y+H QGIVHRDLKPENLLLA +D SIRLADFGFA S+RD + + CGTP YVAPE+L PYG SVDMWS GVIIF++L G PPFHD+DQ+ +FRKIK+G ++F+ +W +S +AKDLI KLL VDP++RLTA +A HPWL T NL+ ++L L +L++FN RKLRAA+++VV AKRL
Sbjct: 494 EDDPKYFYLALELMEGGELLDRIVQKTYYNEAEARDVCVPLLRAVEYLHSQGIVHRDLKPENLLLASASDATSIRLADFGFAASIRDGDLINGCGTPFYVAPEMLKNVPYGASVDMWSVGVIIFVLLAGRPPFHDRDQKLMFRKIKSGEYQFKGDFWQGISGDAKDLITKLLTVDPAKRLTASEACKHPWLTTDAPNLSCHNLSARLEQLKVFNTVRKLRAAVKTVVAMSMFAKRL 729
BLAST of mRNA_H-elongata_contig16247.3966.1 vs. uniprot
Match: A0A7S2XV40_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV40_9STRA) HSP 1 Score: 293 bits (749), Expect = 1.660e-95 Identity = 139/237 (58.65%), Postives = 181/237 (76.37%), Query Frame = 1
Query: 4 DDPKWFYMVLELMDGGELFDRIVEKTVYNEEEARDVCRVLLGAVKYIHDQGIVHRDLKPENLLLACKTDDASIRLADFGFACSVRD-RLVTDQCGTPVYVAPEILWANPYGRSVDMWSTGVIIFIMLGGYPPFHDQDQRRLFRKIKAGNFKFEPKYWGEVSEEAKDLIRKLLMVDPSRRLTAEQAVNHPWLATSGSNLAINDLGVGLSKLRIFNATRKLRAAIQSVVVAKKIAKRLG 711
++ ++Y+V+ELM+GGELFDRIV+KT YNE+EARD+ +LL A+K+ HD GIVHRDLKPENLLL DDASI++ADFGFA V++ +T QCGTP YVAPEIL PYG +VDMWS GVI +I+LGGYPPFHD+ Q LF KI+AG+F F P+YW VSEEAKDLIRKLL VDP++R+TA +A+ HPW+ + LA +L L +LR FNA RK R+ ++++V A ++ +G
Sbjct: 95 EEKHFYYLVIELMEGGELFDRIVQKTYYNEKEARDLVHILLSAIKFCHDNGIVHRDLKPENLLLTSSKDDASIKIADFGFARQVKESNNLTTQCGTPGYVAPEILNGVPYGLAVDMWSIGVITYILLGGYPPFHDEKQSNLFAKIRAGDFVFHPEYWDPVSEEAKDLIRKLLTVDPNKRITAAEAMQHPWVTGADETLAARNLDSQLRELRRFNARRKFRSGVKAIVAANRMQAIIG 331
BLAST of mRNA_H-elongata_contig16247.3966.1 vs. uniprot
Match: A0A7S2LU62_9STRA (Phosphorylase kinase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LU62_9STRA) HSP 1 Score: 288 bits (738), Expect = 2.690e-94 Identity = 139/240 (57.92%), Postives = 179/240 (74.58%), Query Frame = 1
Query: 4 DDPKWFYMVLELMDGGELFDRIVEKTVYNEEEARDVCRVLLGAVKYIHDQGIVHRDLKPENLLLACKTDDASIRLADFGFACSVRDR-LVTDQCGTPVYVAPEILWANPYGRSVDMWSTGVIIFIMLGGYPPFHDQDQRRLFRKIKAGNFKFEPKYWGEVSEEAKDLIRKLLMVDPSRRLTAEQAVNHPWLATSGSNLAINDLGVGLSKLRIFNATRKLRAAIQSVVVAKKIAKRLGIEY 720
+D FY+V+E + GGELFDRIVEK+ YNE+EAR CR+LL A+ Y H+ G+ HRDLKPENLLL K DD+SI++ADFGFA V + + QCGTP YVAPEIL PY SVDMWS GVI++I+LGGYPPF + DQRRLFRKI+ G ++F +YWG VS +AKDLI KLL VDP++RL+ E+A+ H W+ S LA DLG LS+LR +NA RK +AA+Q+V++A K+ LG ++
Sbjct: 88 EDSNMFYLVMECVMGGELFDRIVEKSYYNEKEARATCRILLEAIGYCHEHGVAHRDLKPENLLLRSKEDDSSIKIADFGFAKIVEGKGSLKTQCGTPGYVAPEILNGKPYDESVDMWSVGVILYILLGGYPPFIEDDQRRLFRKIRKGQYEFHEEYWGSVSADAKDLISKLLTVDPAKRLSCEEALQHKWMMQDASVLAAADLGTNLSELRKYNAKRKFKAAVQAVIIANKMTS-LGADF 326
BLAST of mRNA_H-elongata_contig16247.3966.1 vs. uniprot
Match: A0A7S0SZL7_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SZL7_9STRA) HSP 1 Score: 286 bits (731), Expect = 4.210e-94 Identity = 131/231 (56.71%), Postives = 177/231 (76.62%), Query Frame = 1
Query: 4 DDPKWFYMVLELMDGGELFDRIVEKTVYNEEEARDVCRVLLGAVKYIHDQGIVHRDLKPENLLLACKTDDASIRLADFGFACSVRDRLVTDQCGTPVYVAPEILWANPYGRSVDMWSTGVIIFIMLGGYPPFHDQDQRRLFRKIKAGNFKFEPKYWGEVSEEAKDLIRKLLMVDPSRRLTAEQAVNHPWLATSGSNLAINDLGVGLSKLRIFNATRKLRAAIQSVVVAKKI 696
++ K +Y+VLE MDGGELFDRIV+KTVYNE+EARDV ++L+ A+KY HD+ +VHRDLKPENLLL + DDAS+++ADFGFA V L++ QCGTP Y+APEIL PYG++VDMWS GVI +I+LGGYPPFHD + R LFRKI+ G+F+F P+YW VS +AK+LI+ LL V+ S RLTA+Q + HPWL T + LA +L L++ + FNA R+ + A ++V+ ++
Sbjct: 15 EEEKNYYVVLEYMDGGELFDRIVKKTVYNEKEARDVVKILVSAIKYCHDRDVVHRDLKPENLLLTSREDDASLKIADFGFAVRVNSNLLSTQCGTPGYIAPEILENKPYGKAVDMWSIGVITYIILGGYPPFHDDNMRNLFRKIRKGDFEFHPEYWNNVSSDAKNLIKGLLTVNASARLTADQVLQHPWLMTDDATLAAINLDSNLAEFKKFNAARRFKGAAKAVMAVNRM 245 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16247.3966.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig16247.3966.1 >prot_H-elongata_contig16247.3966.1 ID=prot_H-elongata_contig16247.3966.1|Name=mRNA_H-elongata_contig16247.3966.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=235bp MVLELMDGGELFDRIVEKTVYNEEEARDVCRVLLGAVKYIHDQGIVHRDLback to top mRNA from alignment at H-elongata_contig16247:2..3781+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig16247.3966.1 ID=mRNA_H-elongata_contig16247.3966.1|Name=mRNA_H-elongata_contig16247.3966.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3780bp|location=Sequence derived from alignment at H-elongata_contig16247:2..3781+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig16247:2..3781+ >mRNA_H-elongata_contig16247.3966.1 ID=mRNA_H-elongata_contig16247.3966.1|Name=mRNA_H-elongata_contig16247.3966.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1410bp|location=Sequence derived from alignment at H-elongata_contig16247:2..3781+ (Himanthalia elongata Himel1 dioecious)back to top |