mRNA_H-elongata_contig16247.3966.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig16247.3966.1
Unique NamemRNA_H-elongata_contig16247.3966.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig16247.3966.1 vs. uniprot
Match: D8LEF0_ECTSI (Myosin light chain kinase (MLCK) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF0_ECTSI)

HSP 1 Score: 362 bits (929), Expect = 1.500e-118
Identity = 173/238 (72.69%), Postives = 204/238 (85.71%), Query Frame = 1
Query:    1 EDDPKWFYMVLELMDGGELFDRIVEKTVYNEEEARDVCRVLLGAVKYIHDQGIVHRDLKPENLLLACKTDDASIRLADFGFACSVRDRLVTDQCGTPVYVAPEILWANPYGRSVDMWSTGVIIFIMLGGYPPFHDQDQRRLFRKIKAGNFKFEPKYWGEVSEEAKDLIRKLLMVDPSRRLTAEQAVNHPWLATSGSNLAINDLGVGLSKLRIFNATRKLRAAIQSVVVAKKIAKRLGI 714
            +DDPK+FYMVLELM+GGELFDRIV+K  YNE EARDVC   L A+KY H QG+VHRDLKPENLLLA K+DD+SIRLADFGFA SV D  VTDQCGTP YVAPEIL + PYG SVDMWS GVII+I+L GYPPFHD+DQ RL+RKIKAG+++F+P+YW +VS EAKDLIRKLL VDP+RRLTA +A  HPWL+T+  NL  +DLG GL KL+IFNATRKLRAAI+SV+++KKIA+ LG+
Sbjct:  446 QDDPKFFYMVLELMEGGELFDRIVQKQYYNEAEARDVCLTFLEAMKYTHGQGVVHRDLKPENLLLASKSDDSSIRLADFGFAVSVLDGYVTDQCGTPGYVAPEILRSRPYGTSVDMWSIGVIIYIILAGYPPFHDEDQNRLYRKIKAGHYRFDPEYWNDVSSEAKDLIRKLLTVDPTRRLTAAEACEHPWLSTARGNLTQHDLGAGLEKLKIFNATRKLRAAIRSVLLSKKIARDLGL 683          
BLAST of mRNA_H-elongata_contig16247.3966.1 vs. uniprot
Match: D8LK21_ECTSI (Possible Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK21_ECTSI)

HSP 1 Score: 344 bits (882), Expect = 2.870e-115
Identity = 164/239 (68.62%), Postives = 199/239 (83.26%), Query Frame = 1
Query:    1 EDDPKWFYMVLELMDGGELFDRIVEKTVYNEEEARDVCRVLLGAVKYIHDQGIVHRDLKPENLLLACKTDDASIRLADFGFACSVRDRLVTDQCGTPVYVAPEILWANPYGRSVDMWSTGVIIFIMLGGYPPFHDQDQRRLFRKIKAGNFKFEPKYWGEVSEEAKDLIRKLLMVDPSRRLTAEQAVNHPWLATSGSNLAINDLGVGLSKLRIFNATRKLRAAIQSVVVAKKIAKRLGIE 717
            +DDP ++YMVLE M GGELFDRIV+K+ YNEEEARD+CRVLL +V+Y H+ GIVHRDLKPENLLL  K DDA I+LADFGFACSV +  V++QCG+P YVAPEIL A PYG SVDMWS GVII+ +LGGYPPFHD++Q RLFR+IKAG+FKF  +YW   S EAKDLIRKLL+VDP++R+TA QA  HPWL T+G++LA ++LG  L +LRIFNATRKLR AIQSV+ AKK+ K  G++
Sbjct:  150 QDDPDYYYMVLENMAGGELFDRIVQKSYYNEEEARDLCRVLLDSVRYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRKLLLVDPAKRMTATQAAEHPWLLTTGASLAGHNLGKNLDQLRIFNATRKLRGAIQSVIAAKKLGKSFGLQ 388          
BLAST of mRNA_H-elongata_contig16247.3966.1 vs. uniprot
Match: A0A6H5KCN7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN7_9PHAE)

HSP 1 Score: 335 bits (858), Expect = 6.290e-114
Identity = 162/231 (70.13%), Postives = 191/231 (82.68%), Query Frame = 1
Query:   25 MVLELMDGGELFDRIVEKTVYNEEEARDVCRVLLGAVKYIHDQGIVHRDLKPENLLLACKTDDASIRLADFGFACSVRDRLVTDQCGTPVYVAPEILWANPYGRSVDMWSTGVIIFIMLGGYPPFHDQDQRRLFRKIKAGNFKFEPKYWGEVSEEAKDLIRKLLMVDPSRRLTAEQAVNHPWLATSGSNLAINDLGVGLSKLRIFNATRKLRAAIQSVVVAKKIAKRLGIE 717
            MVLE M GGELFDRIV+KT YNEEEARD+CRVLL +VKY H+ GIVHRDLKPENLLL  K DDA I+LADFGFACSV +  V++QCG+P YVAPEIL A PYG SVDMWS GVII+ +LGGYPPFHD++Q RLFR+IKAG+FKF  +YW   S EAKDLIRKLL+VDP++R+TA QA  HPWL T+G +LA ++LG  L +LRIFNATRKLR AIQSV+ AKK+ K  G++
Sbjct:    1 MVLENMAGGELFDRIVQKTYYNEEEARDLCRVLLDSVKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRKLLLVDPAKRMTATQAAEHPWLLTTGESLASHNLGKNLDQLRIFNATRKLRGAIQSVIAAKKLGKSFGLQ 231          
BLAST of mRNA_H-elongata_contig16247.3966.1 vs. uniprot
Match: A0A6H5K8I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I6_9PHAE)

HSP 1 Score: 346 bits (888), Expect = 2.500e-112
Identity = 166/225 (73.78%), Postives = 194/225 (86.22%), Query Frame = 1
Query:    4 DDPKWFYMVLELMDGGELFDRIVEKTVYNEEEARDVCRVLLGAVKYIHDQGIVHRDLKPENLLLACKTDDASIRLADFGFACSVRDRLVTDQCGTPVYVAPEILWANPYGRSVDMWSTGVIIFIMLGGYPPFHDQDQRRLFRKIKAGNFKFEPKYWGEVSEEAKDLIRKLLMVDPSRRLTAEQAVNHPWLATSGSNLAINDLGVGLSKLRIFNATRKLRAAIQSV 678
            D+PK+FYMVLELM+GGELFDRIV+K  YNE EARDVC  +L A+KYIH QG+VHRDLKPENLLLA K+DD+SIRLADFGFA SV D  VTDQCGTP YVAPEIL  +PYG SVDMWS GVII+I+L GYPPF D+DQ RL+RKIKAG+++FEP+YW +VS EAKDLIRKLL+VDP+RRLTA +A  HPWL+T+  NL  +DLG GL KL+IFNATRKLRAAI++V
Sbjct:  442 DNPKFFYMVLELMEGGELFDRIVQKQYYNEAEARDVCLTILEAIKYIHGQGVVHRDLKPENLLLASKSDDSSIRLADFGFAVSVLDGYVTDQCGTPGYVAPEILRGHPYGTSVDMWSIGVIIYIILAGYPPFCDEDQHRLYRKIKAGHYRFEPEYWNDVSSEAKDLIRKLLIVDPTRRLTAAEACEHPWLSTARGNLTKHDLGAGLEKLKIFNATRKLRAAIRTV 666          
BLAST of mRNA_H-elongata_contig16247.3966.1 vs. uniprot
Match: A0A6H5K8A8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8A8_9PHAE)

HSP 1 Score: 323 bits (828), Expect = 1.970e-107
Identity = 155/239 (64.85%), Postives = 189/239 (79.08%), Query Frame = 1
Query:    1 EDDPKWFYMVLELMDGGELFDRIVEKTVYNEEEARDVCRVLLGAVKYIHDQGIVHRDLKPENLLLACKTDDASIRLADFGFACSVRDRLVTDQCGTPVYVAPEILWANPYGRSVDMWSTGVIIFIMLGGYPPFHDQDQRRLFRKIKAGNFKFEPKYWGEVSEEAKDLIRKLLMVDPSRRLTAEQAVNHPWLATSGSNLAINDLGVGLSKLRIFNATRKLRAAIQSVVVAKKIAKRLGIE 717
            +DDP  +Y+ +E M GGELFDRIV+K  YNE+EARD+CR+LL AV+Y HD GIVHRDLKPENLLL  + DDA+++LADFGFA S+    V+ QCGTP YVAPEIL A  YG SVDMWS GVI++I+LGGYPPFHD++Q RLFRKIKAGNFKF P+YW   S EAKDLIR+LL VDP +RLTA QAV HPWL +   +L  ++LGV L +LR+FNA RKLRAAI+SV+  + +A +  IE
Sbjct:  126 KDDPDNYYVSIEYMRGGELFDRIVKKAFYNEKEARDLCRILLDAVRYCHDLGIVHRDLKPENLLLTSQHDDANVKLADFGFARSIMGGFVSTQCGTPGYVAPEILRAESYGTSVDMWSIGVIVYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWQSTSSEAKDLIRRLLTVDPKKRLTAAQAVTHPWLLSKDDDLLKHNLGVNLEQLRLFNARRKLRAAIKSVLATQMMAGKFNIE 364          
BLAST of mRNA_H-elongata_contig16247.3966.1 vs. uniprot
Match: A0A835YZ60_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ60_9STRA)

HSP 1 Score: 310 bits (794), Expect = 1.520e-102
Identity = 146/227 (64.32%), Postives = 184/227 (81.06%), Query Frame = 1
Query:   19 FYMVLELMDGGELFDRIVEKTVYNEEEARDVCRVLLGAVKYIHDQGIVHRDLKPENLLLACKTDDASIRLADFGFACSVRDRLVTDQCGTPVYVAPEILWANPYGRSVDMWSTGVIIFIMLGGYPPFHDQDQRRLFRKIKAGNFKFEPKYWGEVSEEAKDLIRKLLMVDPSRRLTAEQAVNHPWLATSGSNLAINDLGVGLSKLRIFNATRKLRAAIQSVVVAKKIA 699
            +Y+++E M GGELFDRIV+K  Y E+EARD+C++LL A+KY HD+ IVHRDLKPENLLL    DDASI+LADFGFA ++   +VT QCGTP YVAPEIL   PYG SVDMWS GVII+I+LGGYPPFHD++Q RLFRKI+AG F+F  +YWG +S +AKDLI +LL VD   RLTA +AV+HPWL TS ++LA  +LG  L +L++FNA RKLRAAI+SV+VA+++A
Sbjct:  114 YYVIIEYMRGGELFDRIVKKQFYTEKEARDLCKILLDAIKYCHDRDIVHRDLKPENLLLTSNDDDASIKLADFGFAKALNGSMVTTQCGTPAYVAPEILRHRPYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIRAGKFEFHNEYWGSISSDAKDLISRLLTVDQHSRLTAREAVSHPWLLTSDTDLAARNLGKNLEQLKLFNARRKLRAAIKSVLVARRMA 340          
BLAST of mRNA_H-elongata_contig16247.3966.1 vs. uniprot
Match: D8LGW1_ECTSI (Ca2+/calmodulin-dependent protein kinase II n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGW1_ECTSI)

HSP 1 Score: 309 bits (792), Expect = 1.450e-97
Identity = 148/236 (62.71%), Postives = 183/236 (77.54%), Query Frame = 1
Query:    1 EDDPKWFYMVLELMDGGELFDRIVEKTVYNEEEARDVCRVLLGAVKYIHDQGIVHRDLKPENLLLACKTDDASIRLADFGFACSVRDRLVTDQCGTPVYVAPEILWANPYGRSVDMWSTGVIIFIMLGGYPPFHDQDQRRLFRKIKAGNFKFEPKYWGEVSEEAKDLIRKLLMVDPSRRLTAEQAVNHPWLATSGSNLAINDLGVGLSKLRIFNATRKLRAAIQSVVVAKKIAKRL 708
            EDDPK+FY+ LELM+GGEL DRIV+KT YNE EARDVC  LL AV+Y+H QGIVHRDLKPENLLLA  +D  SIRLADFGFA S+RD  + + CGTP YVAPE+L   PYG SVDMWS GVIIF++L G PPFHD+DQ+ +FRKIK+G ++F+  +W  +S +AKDLI KLL VDP++RLTA +A  HPWL T   NL+ ++L   L +L++FN  RKLRAA+++VV     AKRL
Sbjct:  494 EDDPKYFYLALELMEGGELLDRIVQKTYYNEAEARDVCVPLLRAVEYLHSQGIVHRDLKPENLLLASASDATSIRLADFGFAASIRDGDLINGCGTPFYVAPEMLKNVPYGASVDMWSVGVIIFVLLAGRPPFHDRDQKLMFRKIKSGEYQFKGDFWQGISGDAKDLITKLLTVDPAKRLTASEACKHPWLTTDAPNLSCHNLSARLEQLKVFNTVRKLRAAVKTVVAMSMFAKRL 729          
BLAST of mRNA_H-elongata_contig16247.3966.1 vs. uniprot
Match: A0A7S2XV40_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV40_9STRA)

HSP 1 Score: 293 bits (749), Expect = 1.660e-95
Identity = 139/237 (58.65%), Postives = 181/237 (76.37%), Query Frame = 1
Query:    4 DDPKWFYMVLELMDGGELFDRIVEKTVYNEEEARDVCRVLLGAVKYIHDQGIVHRDLKPENLLLACKTDDASIRLADFGFACSVRD-RLVTDQCGTPVYVAPEILWANPYGRSVDMWSTGVIIFIMLGGYPPFHDQDQRRLFRKIKAGNFKFEPKYWGEVSEEAKDLIRKLLMVDPSRRLTAEQAVNHPWLATSGSNLAINDLGVGLSKLRIFNATRKLRAAIQSVVVAKKIAKRLG 711
            ++  ++Y+V+ELM+GGELFDRIV+KT YNE+EARD+  +LL A+K+ HD GIVHRDLKPENLLL    DDASI++ADFGFA  V++   +T QCGTP YVAPEIL   PYG +VDMWS GVI +I+LGGYPPFHD+ Q  LF KI+AG+F F P+YW  VSEEAKDLIRKLL VDP++R+TA +A+ HPW+  +   LA  +L   L +LR FNA RK R+ ++++V A ++   +G
Sbjct:   95 EEKHFYYLVIELMEGGELFDRIVQKTYYNEKEARDLVHILLSAIKFCHDNGIVHRDLKPENLLLTSSKDDASIKIADFGFARQVKESNNLTTQCGTPGYVAPEILNGVPYGLAVDMWSIGVITYILLGGYPPFHDEKQSNLFAKIRAGDFVFHPEYWDPVSEEAKDLIRKLLTVDPNKRITAAEAMQHPWVTGADETLAARNLDSQLRELRRFNARRKFRSGVKAIVAANRMQAIIG 331          
BLAST of mRNA_H-elongata_contig16247.3966.1 vs. uniprot
Match: A0A7S2LU62_9STRA (Phosphorylase kinase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LU62_9STRA)

HSP 1 Score: 288 bits (738), Expect = 2.690e-94
Identity = 139/240 (57.92%), Postives = 179/240 (74.58%), Query Frame = 1
Query:    4 DDPKWFYMVLELMDGGELFDRIVEKTVYNEEEARDVCRVLLGAVKYIHDQGIVHRDLKPENLLLACKTDDASIRLADFGFACSVRDR-LVTDQCGTPVYVAPEILWANPYGRSVDMWSTGVIIFIMLGGYPPFHDQDQRRLFRKIKAGNFKFEPKYWGEVSEEAKDLIRKLLMVDPSRRLTAEQAVNHPWLATSGSNLAINDLGVGLSKLRIFNATRKLRAAIQSVVVAKKIAKRLGIEY 720
            +D   FY+V+E + GGELFDRIVEK+ YNE+EAR  CR+LL A+ Y H+ G+ HRDLKPENLLL  K DD+SI++ADFGFA  V  +  +  QCGTP YVAPEIL   PY  SVDMWS GVI++I+LGGYPPF + DQRRLFRKI+ G ++F  +YWG VS +AKDLI KLL VDP++RL+ E+A+ H W+    S LA  DLG  LS+LR +NA RK +AA+Q+V++A K+   LG ++
Sbjct:   88 EDSNMFYLVMECVMGGELFDRIVEKSYYNEKEARATCRILLEAIGYCHEHGVAHRDLKPENLLLRSKEDDSSIKIADFGFAKIVEGKGSLKTQCGTPGYVAPEILNGKPYDESVDMWSVGVILYILLGGYPPFIEDDQRRLFRKIRKGQYEFHEEYWGSVSADAKDLISKLLTVDPAKRLSCEEALQHKWMMQDASVLAAADLGTNLSELRKYNAKRKFKAAVQAVIIANKMTS-LGADF 326          
BLAST of mRNA_H-elongata_contig16247.3966.1 vs. uniprot
Match: A0A7S0SZL7_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SZL7_9STRA)

HSP 1 Score: 286 bits (731), Expect = 4.210e-94
Identity = 131/231 (56.71%), Postives = 177/231 (76.62%), Query Frame = 1
Query:    4 DDPKWFYMVLELMDGGELFDRIVEKTVYNEEEARDVCRVLLGAVKYIHDQGIVHRDLKPENLLLACKTDDASIRLADFGFACSVRDRLVTDQCGTPVYVAPEILWANPYGRSVDMWSTGVIIFIMLGGYPPFHDQDQRRLFRKIKAGNFKFEPKYWGEVSEEAKDLIRKLLMVDPSRRLTAEQAVNHPWLATSGSNLAINDLGVGLSKLRIFNATRKLRAAIQSVVVAKKI 696
            ++ K +Y+VLE MDGGELFDRIV+KTVYNE+EARDV ++L+ A+KY HD+ +VHRDLKPENLLL  + DDAS+++ADFGFA  V   L++ QCGTP Y+APEIL   PYG++VDMWS GVI +I+LGGYPPFHD + R LFRKI+ G+F+F P+YW  VS +AK+LI+ LL V+ S RLTA+Q + HPWL T  + LA  +L   L++ + FNA R+ + A ++V+   ++
Sbjct:   15 EEEKNYYVVLEYMDGGELFDRIVKKTVYNEKEARDVVKILVSAIKYCHDRDVVHRDLKPENLLLTSREDDASLKIADFGFAVRVNSNLLSTQCGTPGYIAPEILENKPYGKAVDMWSIGVITYIILGGYPPFHDDNMRNLFRKIRKGDFEFHPEYWNNVSSDAKNLIKGLLTVNASARLTADQVLQHPWLMTDDATLAAINLDSNLAEFKKFNAARRFKGAAKAVMAVNRM 245          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16247.3966.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEF0_ECTSI1.500e-11872.69Myosin light chain kinase (MLCK) n=1 Tax=Ectocarpu... [more]
D8LK21_ECTSI2.870e-11568.62Possible Ca2+/calmodulin-dependent protein kinase,... [more]
A0A6H5KCN7_9PHAE6.290e-11470.13Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5K8I6_9PHAE2.500e-11273.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8A8_9PHAE1.970e-10764.85Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A835YZ60_9STRA1.520e-10264.32Kinase-like domain-containing protein n=1 Tax=Trib... [more]
D8LGW1_ECTSI1.450e-9762.71Ca2+/calmodulin-dependent protein kinase II n=1 Ta... [more]
A0A7S2XV40_9STRA1.660e-9558.65Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2LU62_9STRA2.690e-9457.92Phosphorylase kinase n=1 Tax=Skeletonema marinoi T... [more]
A0A7S0SZL7_9STRA4.210e-9456.71Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16247contigH-elongata_contig16247:2..3781 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score298.9
Seed ortholog evalue2.1e-78
Seed eggNOG ortholog2880.D8LGW1
KEGG koko:K08794
KEGG Pathwayko04921,ko04925,map04921,map04925
EggNOG free text desc.calmodulin-dependent protein kinase activity
EggNOG OGsKOG0032@1,KOG0032@2759,KOG0033@1,KOG0033@2759
EC2.7.11.17
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Hectar predicted targeting categoryother localisation
Exons5
Model size729
Cds size705
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16247.3966.1prot_H-elongata_contig16247.3966.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig16247 26..3781 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929950.7340178-UTR-H-elongata_contig16247:1..251622929950.7340178-UTR-H-elongata_contig16247:1..25Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16247 2..25 +
1691679220.3618894-UTR-H-elongata_contig16247:1..251691679220.3618894-UTR-H-elongata_contig16247:1..25Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16247 2..25 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929950.7478554-CDS-H-elongata_contig16247:25..791622929950.7478554-CDS-H-elongata_contig16247:25..79Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16247 26..79 +
1691679220.3738246-CDS-H-elongata_contig16247:25..791691679220.3738246-CDS-H-elongata_contig16247:25..79Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16247 26..79 +
1622929950.7601304-CDS-H-elongata_contig16247:662..9201622929950.7601304-CDS-H-elongata_contig16247:662..920Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16247 663..920 +
1691679220.3820865-CDS-H-elongata_contig16247:662..9201691679220.3820865-CDS-H-elongata_contig16247:662..920Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16247 663..920 +
1622929950.7755287-CDS-H-elongata_contig16247:1648..18071622929950.7755287-CDS-H-elongata_contig16247:1648..1807Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16247 1649..1807 +
1691679220.3907328-CDS-H-elongata_contig16247:1648..18071691679220.3907328-CDS-H-elongata_contig16247:1648..1807Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16247 1649..1807 +
1622929950.7888649-CDS-H-elongata_contig16247:3032..32121622929950.7888649-CDS-H-elongata_contig16247:3032..3212Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16247 3033..3212 +
1691679220.3998795-CDS-H-elongata_contig16247:3032..32121691679220.3998795-CDS-H-elongata_contig16247:3032..3212Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16247 3033..3212 +
1622929950.8075168-CDS-H-elongata_contig16247:3727..37811622929950.8075168-CDS-H-elongata_contig16247:3727..3781Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16247 3728..3781 +
1691679220.413079-CDS-H-elongata_contig16247:3727..37811691679220.413079-CDS-H-elongata_contig16247:3727..3781Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16247 3728..3781 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig16247.3966.1

>prot_H-elongata_contig16247.3966.1 ID=prot_H-elongata_contig16247.3966.1|Name=mRNA_H-elongata_contig16247.3966.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=235bp
MVLELMDGGELFDRIVEKTVYNEEEARDVCRVLLGAVKYIHDQGIVHRDL
KPENLLLACKTDDASIRLADFGFACSVRDRLVTDQCGTPVYVAPEILWAN
PYGRSVDMWSTGVIIFIMLGGYPPFHDQDQRRLFRKIKAGNFKFEPKYWG
EVSEEAKDLIRKLLMVDPSRRLTAEQAVNHPWLATSGSNLAINDLGVGLS
KLRIFNATRKLRAAIQSVVVAKKIAKRLGIEYSE*
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mRNA from alignment at H-elongata_contig16247:2..3781+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig16247.3966.1 ID=mRNA_H-elongata_contig16247.3966.1|Name=mRNA_H-elongata_contig16247.3966.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3780bp|location=Sequence derived from alignment at H-elongata_contig16247:2..3781+ (Himanthalia elongata Himel1 dioecious)
GAAGACGACCCCAAATGGTTTTACATGGTACTCGAGCTTATGGACGGGGG CGAGCTCTTCGACCGGATCGTCGAAAAGGTGGGCAAGTCCTCTTGGGAAT TAAGTGGCGAGATCTCCGCGAGTCTGCATAGCGTGTGCGCACAAAAAACA CTACTCATTGCGGCAGTAATATATATATTAATATTAATATAGCTCTACTA CCCCCCAAACCCCGTCCCTATATACTTCTTGATTCTACGGAAACCCTGTG TGAAAAGGATAATTAGCGGAATACGAAGTAAGTTACGCCTGGAAAGAGGT GGAAACATCAACTTGAATTATCTATTGTGCCGAGCACTGCCTGCCCGCAG AGGAGGTTTAAAAATTCAAAGTGTTTCGTTCTTCTTAGTCCTCGGCTGCG CGGAGCGATTCCTGGTCGGGTTGAGCCAGGAAAGGGTCGAATTGGATCGA ATCGAGTCGAGGGTAAAGCAGGCAGTAGGTAACAGAAGGCGAAGACGGCA TCGCACTACAGCGCTTCCGTGTTTCGTGTGCGGCCGTTTTATCGTGGCCA GAAAACAATCCGCTCTCTTCTTCTGAGAGAACATTCAGTTACTCTCTCTC TCTCTCTTGTGCGCGATCTTTCCGACCCTTCCTACGGTCTCTCTCTCCCT CGTGCGCGCAGACTGTGTACAACGAGGAGGAGGCGAGGGATGTCTGCCGC GTCCTGCTCGGGGCCGTAAAGTACATTCACGATCAGGGTATAGTTCACCG GGACCTTAAGCCGGAGAACTTGCTGCTGGCTTGCAAGACGGACGACGCCA GCATCCGGCTCGCCGACTTCGGGTTCGCGTGCAGCGTTCGCGATCGGCTC GTGACCGACCAGTGTGGGACCCCGGTGTACGTTGCGCCGGAGATCCTGTG GGCGAATCCTTATGGAAGGGTGAGTATACCAAGTGCTTGTACTAATAATA ATACTACTAATAATAAAAATAATGAGGATCGTGAGGGTAAGATGATTTCA TTTTCGCGAGCGAGTTTTTATCTTGTTGCACTGCATCGCATGGTATATGA TCATATGGTCGTATACGAACCGCGCGTTGGATGTGGGACACCACCGCGGA TACCTGCTTGTCAAAGGCGGGGGAGGGGGGGGACGGGGGGAGGGTGACGG GTGGCATGGACGTTACGAGCACGGGGCTGGAAGGCGCTTTCCTCGTTTAA TTTCTTACCGCCGTCAAAGTCGCCCTCTCTCCCGTGTGTCCAGACTCTGA AGAGATGTTTGTAGTTTGTTGTAACTGAAGCCCCCCATATATCGCCACTA TTGACCGCCATTGCTTCATGGCTGTTAGAATGCATAAAACGTGTCATGAG CGAGCAAAACTTCCACCTACTGTGTAAAATAGAGCCACTCGTTGTTATTA ACGGTGCGTCTTTCCTCCCATTCCTTTCCAGTCAAGCTGCCAAATACTGA CTTCTACTGACTTCGTCGCGTTGAGCTGACAAATACTGACTTGTAAGCTA GTCCCACGGAGAGATTCAGATGTGCTCCGGGAAGACGCCGCATGCGCCCC CCTCCCCCCATGCCCAAATAAGAAACAAAACAAAACTGAAGTCCAGACAA AAAAACAAAACAAAAAAACGCCTCCTGCCATCTTCGGATGCTTTCAGTCG GTGGACATGTGGAGCACAGGAGTGATTATCTTCATCATGCTGGGCGGGTA CCCTCCGTTCCACGACCAAGACCAGAGGCGCCTCTTTAGAAAGATTAAGG CCGGGAACTTCAAGTTCGAACCTAAGTACTGGGGCGAAGTGTCAGAGGAG GCGAAGGTGAGATGTTGCCAGTAGACTTAGGCAAGAATCCGACAAATTAG AAAACTTCTTATAATTATCTATAATCAGAGGTCTTTGAAGGCGTTTTGGT TCACAGCACTGTCAGATGTTGTTGCCGGTGGTAATGTTGTTATTATTGTT TGTTACTTTTCACGCCGACTGAGCTGATCCCTAATCCCACTCGTGAGCCG AAAGTAGAACAACGATCGCGGAACAAAGCAACCAACTCCCCCTTGGCCCT CTTATATTCTGGACTGATTGTGTTGGTTGTGTAACGTCGGGGTTACTCTT TGCGTATATGCCCGAGGCGGGGAAATTTTCTCGAAAGCTCTGAACTCATT CAAACCCTCCGACAATCCACAACGCCTTCATTCCTGAGGGACGGGGAACC CCTTTCCTCGAAAACTACGACGGACAAGTGACGATACAGTACACGCTTAG AAAACCGGCCTTGGAAAGAGTTCGACGAGGTGTTTCAAACCCGGAGTTTC TAGTATTAACTACCGGCCTTCTCTTTGAGGAAACCAACAGGGGATATTCA CGTCTGTCCCCGGGCGTGTTTTATAGCTGTACTATTAATACCTCGACTAG GAGGAGTAAGGAAACTATATACGTGGCGCAGTTTTTGTTGATCTGTAATT TGATAGTAATATATACAGTACTGTACTGTACTGTAGTTTATTCTCCTCGC CCCCTTTTTGGTTGCTATTTAAACGACTTGGCATCAACCTAGTACTCTGT ATACTATGTATACTATGTGTACTATGTATTAAGTAAGCTGTAAAGTGTTG TACGGAATCCGTTATACGGAATCCGTCTGGACGAAGACTCGAACGGTTAC GTAACTTCAAACCTAAGAAGCAATCAAATGATTTGCCGTGTGGCACGTAT ATCGTTGCACCATGTCTTTCCCTCTGTGTGTGTGTGTGTGTCCGCACATA CAGCTATACAATACATCAACACTCTCCTGGACCAGCTACAAGCTATTATT ATAATTTACTGGATAATTTATTGGAAAGCCGAGACGTTTGTCTTCAGAAT ATTTTTATCCAGAGATGTATGTCTGTACAAACAAGCCGGCATCGTCCTCT ACTGTTGCAGTGTAGTATAGTGTAGTGCTTCGATGCATGGAGATCCTAAA CTGCGTTTGCTTGCCTCTGGTCCTTTTACGAGTTTTTCACATCTCGAGCC TGCCTTGCCTCTGGTACTCGCTGTCGCTCAGGATCTCATCCGCAAGCTTT TGATGGTGGACCCGTCTCGACGGCTGACGGCTGAACAGGCCGTCAACCAC CCCTGGCTCGCCACAAGTGGTAGTAACTTGGCCATCAACGACCTCGGCGT CGGGCTCAGCAAGCTGCGAATCTTCAACGCAACGAGGAAGCTGCGAGCCG CGATTCAATCGGTGAGAAGTGTTCGCCGCCTGAGCTAGAATACCCATTGC AAGTTAGAGAGCCACGAGCTGAGAGAGGGATGGACGTATATTTTCCTTCT TTACCCTTGTGTCTTGCAGTGATTTACAGCGGTACACTATTTACACCACC AGATTTACAGCGGTACACTGTTACGTTTTTAGTTATAATATAATAGTTGG GTGCGAAACGATGGCAAGGGAGAATTTCCTCTCCCCGTAGCTCCACGGAC GCACAGAGATGTATGCTCAAATCCTGCCCGCGAAGTCCTTATTTATATAT TTTGCACCGGCGTCCTTCTACAGTACGGCACCCATGTCGTGTTACACATT TGCGCGAGCGAGATGTGCATGTTTTGACGATTGCCACAAAAGGGATGGTC GGGTCATTTCCTCTTTTTGAACGGTGAGATTGCGGGGTGTTATTACCATG TGAATCCCAGGGAAGGCTCACCTTCTTCCCGCTCATGCCGCCTGTCGACA CGCCTGTCCCTTTTTCCGTCGTTCAGGTGGTTGTGGCGAAAAAGATTGCC AAGAGACTGGGGATTGAGTACAGTGAATGA
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Coding sequence (CDS) from alignment at H-elongata_contig16247:2..3781+

>mRNA_H-elongata_contig16247.3966.1 ID=mRNA_H-elongata_contig16247.3966.1|Name=mRNA_H-elongata_contig16247.3966.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1410bp|location=Sequence derived from alignment at H-elongata_contig16247:2..3781+ (Himanthalia elongata Himel1 dioecious)
ATGGTACTCGAGCTTATGGACGGGGGCGAGCTCTTCGACCGGATCGTCGA
AAAGATGGTACTCGAGCTTATGGACGGGGGCGAGCTCTTCGACCGGATCG
TCGAAAAGACTGTGTACAACGAGGAGGAGGCGAGGGATGTCTGCCGCGTC
CTGCTCGGGGCCGTAAAGTACATTCACGATCAGGGTATAGTTCACCGGGA
CCTTAAGCCGGAGAACTTGCTGCTGGCTTGCAAGACGGACGACGCCAGCA
TCCGGCTCGCCGACTTCGGGTTCGCGTGCAGCGTTCGCGATCGGCTCGTG
ACCGACCAGTGTGGGACCCCGGTGTACGTTGCGCCGGAGATCCTGTGGGC
GAATCCTTATGGAAGGACTGTGTACAACGAGGAGGAGGCGAGGGATGTCT
GCCGCGTCCTGCTCGGGGCCGTAAAGTACATTCACGATCAGGGTATAGTT
CACCGGGACCTTAAGCCGGAGAACTTGCTGCTGGCTTGCAAGACGGACGA
CGCCAGCATCCGGCTCGCCGACTTCGGGTTCGCGTGCAGCGTTCGCGATC
GGCTCGTGACCGACCAGTGTGGGACCCCGGTGTACGTTGCGCCGGAGATC
CTGTGGGCGAATCCTTATGGAAGGTCGGTGGACATGTGGAGCACAGGAGT
GATTATCTTCATCATGCTGGGCGGGTACCCTCCGTTCCACGACCAAGACC
AGAGGCGCCTCTTTAGAAAGATTAAGGCCGGGAACTTCAAGTTCGAACCT
AAGTACTGGGGCGAAGTGTCAGAGGAGGCGAAGTCGGTGGACATGTGGAG
CACAGGAGTGATTATCTTCATCATGCTGGGCGGGTACCCTCCGTTCCACG
ACCAAGACCAGAGGCGCCTCTTTAGAAAGATTAAGGCCGGGAACTTCAAG
TTCGAACCTAAGTACTGGGGCGAAGTGTCAGAGGAGGCGAAGGATCTCAT
CCGCAAGCTTTTGATGGTGGACCCGTCTCGACGGCTGACGGCTGAACAGG
CCGTCAACCACCCCTGGCTCGCCACAAGTGGTAGTAACTTGGCCATCAAC
GACCTCGGCGTCGGGCTCAGCAAGCTGCGAATCTTCAACGCAACGAGGAA
GCTGCGAGCCGCGATTCAATCGGATCTCATCCGCAAGCTTTTGATGGTGG
ACCCGTCTCGACGGCTGACGGCTGAACAGGCCGTCAACCACCCCTGGCTC
GCCACAAGTGGTAGTAACTTGGCCATCAACGACCTCGGCGTCGGGCTCAG
CAAGCTGCGAATCTTCAACGCAACGAGGAAGCTGCGAGCCGCGATTCAAT
CGGTGGTTGTGGCGAAAAAGATTGCCAAGAGACTGGGGATTGAGTACAGT
GAATGAGTGGTTGTGGCGAAAAAGATTGCCAAGAGACTGGGGATTGAGTA
CAGTGAATGA
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