mRNA_H-elongata_contig15799.3768.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig15799.3768.1 vs. uniprot
Match: D8LP09_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP09_ECTSI) HSP 1 Score: 164 bits (416), Expect = 8.910e-45 Identity = 85/121 (70.25%), Postives = 97/121 (80.17%), Query Frame = 1
Query: 4 LETQRLMLSPRALQQGWKEELDGNIEQHHGWITERKLEAVFGGSLPARELEEEVLQRKETLDKTRRRATQLADWRDMEIRGIFDSEARRRFDDKHLDERRKAADEKRKWAVSHVTHSGKPD 366
L+TQR+MLSPRALQQGWKEELD NI QH WIT+RKLEAVF SLPARELEE+V +R + +R+A +LA WRD E+ IFD EAR+RFDD+HL R K ADEKRKWAV HVTHSGKPD
Sbjct: 438 LKTQRMMLSPRALQQGWKEELDSNIGQHKEWITKRKLEAVFEASLPARELEEQVERRDWLFSERKRQAARLARWRDTEMAEIFDREARKRFDDQHLQNRHKVADEKRKWAVRHVTHSGKPD 558
BLAST of mRNA_H-elongata_contig15799.3768.1 vs. uniprot
Match: A0A7S1G3Q0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G3Q0_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 3.490e-20 Identity = 49/121 (40.50%), Postives = 74/121 (61.16%), Query Frame = 1
Query: 4 LETQRLMLSPRALQQGWKEELDGNIEQHHGWITERKLEAVFGGSLPARELEEEVLQRKETLDKTRRRATQLADWRDMEIRGIFDSEARRRFDDKHLDERRKAADEKRKWAVSHVTHSGKPD 366
L+ +R+ +SPRA++QGW EELD N+EQH W T+ KL+A+F +LP R +EEE + + + R QL +W M+ + E+ R++ H + R+ A +KRKWA T +GKPD
Sbjct: 58 LQRERMKMSPRAVEQGWTEELDKNVEQHRVWTTDAKLKALFQVALPLRLMEEEKEKNDQEYADLKYRREQLDEWWRMDRDDMXXXESERKWALHHENRRKNIAGQKRKWAFQFYTDTGKPD 178
BLAST of mRNA_H-elongata_contig15799.3768.1 vs. uniprot
Match: A0A5D6XLP7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLP7_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 6.240e-15 Identity = 44/121 (36.36%), Postives = 69/121 (57.02%), Query Frame = 1
Query: 4 LETQRLMLSPRALQQGWKEELDGNIEQHHGWITERKLEAVFGGSLPARELEEEVLQRKETLDKTRRRATQLADWRDMEIRGIFDSEARRRFDDKHLDERRKAADEKRKWAVSHVTHSGKPD 366
++TQRL +SPRA++QGW EE++G ++ IT+ KLE VF L ++ EE +L + L R WR+ E ++ E + + D R+K AD++R+WA++ SGKPD
Sbjct: 385 MQTQRLRVSPRAIEQGWVEEMEGKMKLQRAAITKLKLETVFQLGLELKQKEELLLDFRRRLRDLEERRRNFEIWREEEFLSYWERECLYQHTQRLADRRKKVADQRRRWAITRYHRSGKPD 505
BLAST of mRNA_H-elongata_contig15799.3768.1 vs. uniprot
Match: A0A2P4XVI8_9STRA (IQGAP protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XVI8_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 1.580e-14 Identity = 40/121 (33.06%), Postives = 75/121 (61.98%), Query Frame = 1
Query: 4 LETQRLMLSPRALQQGWKEELDGNIEQHHGWITERKLEAVFGGSLPARELEEEVLQRKETLDKTRRRATQLADWRDMEIRGIFDSEARRRFDDKHLDERRKAADEKRKWAVSHVTHSGKPD 366
++TQR+ +SPRA++ GW EE++ ++Q IT+ KLE VFG L ++ E+E+++ ++ +++ + +L WR+ E ++ E R R+ K + +R++ A+ +R+W V SGK D
Sbjct: 321 MQTQRMRVSPRAIEHGWVEEMEAKMKQQRALITKLKLETVFGLGLEFKQKEKELIECRQLINEIEEKRRRLEIWRNEEFLDYWERECRFRYQAKLIQKRQQVAENRRRWQVQFYHTSGKRD 441
BLAST of mRNA_H-elongata_contig15799.3768.1 vs. uniprot
Match: A0A7S1TNU7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TNU7_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 7.300e-13 Identity = 43/121 (35.54%), Postives = 70/121 (57.85%), Query Frame = 1
Query: 4 LETQRLMLSPRALQQGWKEELDGNIEQHHGWITERKLEAVFGGSLPARELEEEVLQRKETLDKTRRRATQLADWRDMEIRGIFDSEARRRFDDKHLDERRKAADEKRKWAVSHVTHSGKPD 366
+E Q+ MLSPRAL+ GW ++L N ++T K+EA+F +L R++E + + LD ++ ++ +R EI + E+RR+F+ + + R+ ADEKR W + H T GKPD
Sbjct: 165 IERQQQMLSPRALEGGWAQQLRENRASAAKFVTGAKMEALFTHALEVRKIERGLASWETKLDDAQQFVVRVKGYRTEEIDEKLERESRRKFNASYRNRLRRIADEKRLWRIRHYTDDGKPD 285
BLAST of mRNA_H-elongata_contig15799.3768.1 vs. uniprot
Match: D0MYQ5_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MYQ5_PHYIT) HSP 1 Score: 73.2 bits (178), Expect = 1.230e-12 Identity = 38/121 (31.40%), Postives = 69/121 (57.02%), Query Frame = 1
Query: 4 LETQRLMLSPRALQQGWKEELDGNIEQHHGWITERKLEAVFGGSLPARELEEEVLQRKETLDKTRRRATQLADWRDMEIRGIFDSEARRRFDDKHLDERRKAADEKRKWAVSHVTHSGKPD 366
++TQR+ +SPRA++ GW EE++ ++Q IT+ K+E VFG L + E E++ ++ ++ T + + WR+ E ++ E R R+ K + R+ A+ +R+W + H GK D
Sbjct: 395 MQTQRMRVSPRAIEHGWVEEMEAKMKQQRVLITKLKIETVFGLGLEFKRKENELVNFQKRINATEEKRRRFEIWRNEEYLEFWERECRFRYQAKIVQNRQHVAETRRRWQIQHYRTDGKRD 515
BLAST of mRNA_H-elongata_contig15799.3768.1 vs. uniprot
Match: A0A225X2Q8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X2Q8_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 1.470e-11 Identity = 36/121 (29.75%), Postives = 72/121 (59.50%), Query Frame = 1
Query: 4 LETQRLMLSPRALQQGWKEELDGNIEQHHGWITERKLEAVFGGSLPARELEEEVLQRKETLDKTRRRATQLADWRDMEIRGIFDSEARRRFDDKHLDERRKAADEKRKWAVSHVTHSGKPD 366
++TQR+ +SPRA++ GW EE++ ++Q IT+ KLE +FG L ++ E+E+++ ++ +++ + + WR E ++ E R R K + +R++ ++ +R+W V +GK D
Sbjct: 333 MQTQRMRVSPRAIEHGWVEEMEVKMKQQRALITKLKLETIFGLGLEFKQKEKELVESQQIINEIEEKRRRFEIWRHEEFLDYWERECRFRHQAKLIQKRQQISETRRRWQVQFYHTNGKRD 453
BLAST of mRNA_H-elongata_contig15799.3768.1 vs. uniprot
Match: A0A329T0M8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T0M8_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 5.080e-11 Identity = 36/121 (29.75%), Postives = 71/121 (58.68%), Query Frame = 1
Query: 4 LETQRLMLSPRALQQGWKEELDGNIEQHHGWITERKLEAVFGGSLPARELEEEVLQRKETLDKTRRRATQLADWRDMEIRGIFDSEARRRFDDKHLDERRKAADEKRKWAVSHVTHSGKPD 366
++TQR+ +SPRA++ GW EE++ ++Q IT+ KLE VF L + E+E+++ ++ ++ + + WR+ E ++ E R R+ K + +R++ A+ +R+W + +GK D
Sbjct: 336 MQTQRMRVSPRAIEHGWVEEMEAKMKQQRALITKLKLETVFELGLEFKRKEKELVEFQQRINAIEEKRRRFEIWRNEEYLDNWERECRFRYQAKIIQKRQQVAETRRRWQIQLYRTNGKSD 456
BLAST of mRNA_H-elongata_contig15799.3768.1 vs. uniprot
Match: W2IER2_PHYPR (Uncharacterized protein n=3 Tax=Phytophthora parasitica TaxID=4792 RepID=W2IER2_PHYPR) HSP 1 Score: 67.4 bits (163), Expect = 1.230e-10 Identity = 36/121 (29.75%), Postives = 68/121 (56.20%), Query Frame = 1
Query: 4 LETQRLMLSPRALQQGWKEELDGNIEQHHGWITERKLEAVFGGSLPARELEEEVLQRKETLDKTRRRATQLADWRDMEIRGIFDSEARRRFDDKHLDERRKAADEKRKWAVSHVTHSGKPD 366
++TQR+ +SPRA++ GW EE++ ++Q IT+ KLE +F L + E+E ++ ++ ++ + + WR+ E ++ E R + K + +R+K A+ +R W V +GK D
Sbjct: 155 MQTQRMRVSPRAIEHGWVEEMEAKMKQQRALITKVKLEVIFALGLEFKRKEKEFIEFQQRINAIEEKRRRFEIWRNEEYLDFWERECRFHYQVKIMQKRQKIAETRRSWQVQLYRTNGKRD 275
BLAST of mRNA_H-elongata_contig15799.3768.1 vs. uniprot
Match: V9EJG5_PHYPR (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=V9EJG5_PHYPR) HSP 1 Score: 67.4 bits (163), Expect = 1.300e-10 Identity = 36/121 (29.75%), Postives = 68/121 (56.20%), Query Frame = 1
Query: 4 LETQRLMLSPRALQQGWKEELDGNIEQHHGWITERKLEAVFGGSLPARELEEEVLQRKETLDKTRRRATQLADWRDMEIRGIFDSEARRRFDDKHLDERRKAADEKRKWAVSHVTHSGKPD 366
++TQR+ +SPRA++ GW EE++ ++Q IT+ KLE +F L + E+E ++ ++ ++ + + WR+ E ++ E R + K + +R+K A+ +R W V +GK D
Sbjct: 395 MQTQRMRVSPRAIEHGWVEEMEAKMKQQRALITKVKLEVIFALGLEFKRKEKEFIEFQQRINAIEEKRRRFEIWRNEEYLDFWERECRFHYQVKIMQKRQKIAETRRSWQVQLYRTNGKRD 515 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15799.3768.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig15799.3768.1 >prot_H-elongata_contig15799.3768.1 ID=prot_H-elongata_contig15799.3768.1|Name=mRNA_H-elongata_contig15799.3768.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=122bp MLETQRLMLSPRALQQGWKEELDGNIEQHHGWITERKLEAVFGGSLPAREback to top mRNA from alignment at H-elongata_contig15799:6778..7696- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig15799.3768.1 ID=mRNA_H-elongata_contig15799.3768.1|Name=mRNA_H-elongata_contig15799.3768.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=919bp|location=Sequence derived from alignment at H-elongata_contig15799:6778..7696- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig15799:6778..7696- >mRNA_H-elongata_contig15799.3768.1 ID=mRNA_H-elongata_contig15799.3768.1|Name=mRNA_H-elongata_contig15799.3768.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=732bp|location=Sequence derived from alignment at H-elongata_contig15799:6778..7696- (Himanthalia elongata Himel1 dioecious)back to top |