mRNA_H-elongata_contig15422.3573.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig15422.3573.1
Unique NamemRNA_H-elongata_contig15422.3573.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig15422.3573.1 vs. uniprot
Match: D7FVR7_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVR7_ECTSI)

HSP 1 Score: 275 bits (704), Expect = 5.610e-87
Identity = 143/166 (86.14%), Postives = 149/166 (89.76%), Query Frame = 1 
Query:   10 EKVLIDCSGPPGEPRNEETGMRRKRDALLSQLERRKVLRTLVFCNTIQGCRQASASVENILSRASRKGQFETLVYHSAIDPKKAAENMRQFMRSNALIPMVMVCTDRSSRGMDFDRAQARAEPSLVEHVLLYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQV 507
            E+VLIDCSGPPGEPRNEETG+ RKRDALLSQLERR  LRTLVFCNTIQGCRQ    VEN+LSRASR GQFETLVYHSAIDPK+AA NM+QFMRSNAL PMVMVCTDRSSRGMDFDRA+       VEHVLLYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQV
Sbjct:  438 EEVLIDCSGPPGEPRNEETGLARKRDALLSQLERRMALRTLVFCNTIQGCRQ----VENMLSRASRGGQFETLVYHSAIDPKQAASNMQQFMRSNALSPMVMVCTDRSSRGMDFDRAE-------VEHVLLYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQV 592
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BLAST of mRNA_H-elongata_contig15422.3573.1 vs. uniprot
Match: A0A836CPS5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPS5_9STRA)

HSP 1 Score: 216 bits (549), Expect = 3.280e-66
Identity = 114/168 (67.86%), Postives = 130/168 (77.38%), Query Frame = 1 
Query:   10 EKVLIDCSGPPGEPRNEETGMRRKRDALLSQLERRK-VLRTLVFCNTIQGCRQASASVENILSRASRKG-QFETLVYHSAIDPKKAAENMRQFMRSNALIPMVMVCTDRSSRGMDFDRAQARAEPSLVEHVLLYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQV 507
            E+VL+DCSGPP E +NE TG  RKR+AL++QL RR   LRTLVFCNTI+ CR+    VEN L R  R+  +F  L YHSAIDP  A  N+R+F RSNAL PM++VCTDRSSRGMDFD A        V+HV+LYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQV
Sbjct:  213 EEVLVDCSGPPEEAKNEATGAARKREALMTQLTRRSGALRTLVFCNTIRSCRE----VENTLRRTDRRSARFSVLAYHSAIDPAAATANLREFSRSNALQPMILVCTDRSSRGMDFDSAS-------VDHVVLYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQV 369
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BLAST of mRNA_H-elongata_contig15422.3573.1 vs. uniprot
Match: A0A7S4DKM7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DKM7_HETAK)

HSP 1 Score: 181 bits (459), Expect = 3.250e-51
Identity = 95/169 (56.21%), Postives = 123/169 (72.78%), Query Frame = 1 
Query:    4 NSEKVLIDCSGPPGEPRNEETGMRRKRDALLSQLERRKVLRTLVFCNTIQGCRQASASVENILSRASRKGQFETLV-YHSAIDPKKAAENMRQFMRSNALIPMVMVCTDRSSRGMDFDRAQARAEPSLVEHVLLYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQV 507
            N E+V+IDCSGP GE + EETG   KR AL   +   +  RTLVFCNTI+ CR+    VEN L R  ++G    L+ YH+AI+P+K  E++R FMRSN+L PMV++CTDR+SRGMDF++A+       V+HV+L+DFPRD  EY+RRVGRTARAGRKG VT L +GRQ+
Sbjct:  337 NLEQVIIDCSGPEGEKKTEETGFAHKRAALAQLMLTVRAHRTLVFCNTIENCRK----VENALRRLDKRGDKHILLPYHNAIEPQKRGEHLRTFMRSNSLNPMVLICTDRASRGMDFEQAE-------VDHVVLFDFPRDAAEYVRRVGRTARAGRKGRVTALVFGRQL 494
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BLAST of mRNA_H-elongata_contig15422.3573.1 vs. uniprot
Match: A0A7S2V2H4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2H4_9STRA)

HSP 1 Score: 181 bits (458), Expect = 3.670e-51
Identity = 93/169 (55.03%), Postives = 122/169 (72.19%), Query Frame = 1 
Query:    4 NSEKVLIDCSGPPGEPRNEETGMRRKRDALLSQLERRKVLRTLVFCNTIQGCRQASASVENILSRASRKGQFE-TLVYHSAIDPKKAAENMRQFMRSNALIPMVMVCTDRSSRGMDFDRAQARAEPSLVEHVLLYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQV 507
            N ++V++DCSGP GE   E++G R KR+AL   L      RTLVFCNTI+ CR+    VEN + R ++KGQ    L +H+AIDP++  +++R FMR N+L+PM+++CTDR+SRGMDFD A        VEHV+L+DFPRDP EYMRRVGRTARAGR G VT L +GRQ+
Sbjct:  372 NLDQVIVDCSGPWGEKHTEDSGFRHKREALTELLATVPAQRTLVFCNTIENCRK----VENAVQRWNKKGQKALVLAHHNAIDPERRGKHLRSFMRPNSLLPMILICTDRASRGMDFDTAD-------VEHVILFDFPRDPSEYMRRVGRTARAGRTGRVTSLVFGRQL 529
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BLAST of mRNA_H-elongata_contig15422.3573.1 vs. uniprot
Match: A0A0G4ET85_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ET85_VITBC)

HSP 1 Score: 165 bits (417), Expect = 5.410e-46
Identity = 91/167 (54.49%), Postives = 114/167 (68.26%), Query Frame = 1 
Query:   10 EKVLIDCSGPPGEPRNEETGMRRKRDALLSQLERRKVLRTLVFCNTIQGCRQASASVENILSRASR-KGQFETLVYHSAIDPKKAAENMRQFMRSNALIPMVMVCTDRSSRGMDFDRAQARAEPSLVEHVLLYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQV 507
            E+VL+DCSGP  E +NE T   RKR AL  QL++  V RTL+FCN+I+ CR+    VEN L R  R + +F+ L YHS ID ++  E    F R N LIPMV+V TD++SRG+DFD+ +       V HV+L+DFPRDP EY+RRVGRTARAGR G VT L  GRQV
Sbjct:  267 EEVLVDCSGPKDEAKNEFTAFERKRKALAGQLDKVVVPRTLIFCNSIENCRR----VENALRRLDRGRKRFQVLPYHSGIDNERRREIFNAFTRENFLIPMVLVSTDQASRGVDFDQVE-------VGHVILFDFPRDPSEYVRRVGRTARAGRAGRVTSLVLGRQV 422
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BLAST of mRNA_H-elongata_contig15422.3573.1 vs. uniprot
Match: I2CPE5_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPE5_NANGC)

HSP 1 Score: 144 bits (362), Expect = 8.590e-39
Identity = 83/167 (49.70%), Postives = 107/167 (64.07%), Query Frame = 1 
Query:   10 EKVLIDCSGPPGEPRNEETGMRRKRDALLSQLERRKVLRTLVFCNTIQGCRQASASVENILSRASRKGQ-FETLVYHSAIDPKKAAENMRQFMRSNALIPMVMVCTDRSSRGMDFDRAQARAEPSLVEHVLLYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQV 507
            E+VL+DCSGP  E RNEETG  RKRD L+  L +    R+LVFCN+I  CR+    VEN L RA R+ + ++ L YHSA++P+   +N+  F  S    P++MVCTDR+SRG+DFD A        V+HV+L+DFPRDP EY+RRVG          VT L  GRQV
Sbjct:  164 EEVLVDCSGPWEEERNEETGFVRKRDMLVQNLLKHPAPRSLVFCNSIPTCRK----VENALRRADRQEKRWQVLAYHSAVNPQDRQKNLDIFS-SRVERPLIMVCTDRTSRGVDFDTAD-------VQHVVLFDFPRDPSEYVRRVGXXXXXXXXXXVTALVLGRQV 318
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BLAST of mRNA_H-elongata_contig15422.3573.1 vs. uniprot
Match: A0A7R9YGA2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YGA2_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.380e-38
Identity = 82/178 (46.07%), Postives = 116/178 (65.17%), Query Frame = 1 
Query:   13 KVLIDCS----GPPGEPRNEETGMRRKRDALLSQLERRKVLRTLVFCNTIQGCRQASASVENILSRASRKG-QFETLVYHSAIDPKKAAENMRQFMRSNALIPMVMVCTDRSSRGMDFDRAQARA--------EPSLVEHVLLYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQV 507
            KVL+DCS    G   +    ET +++K D L+S LE R + RT+VFCN++ GCR+    VEN L+R  R+  +++ L YHSA+    A  ++  F   N+L+P+V+VCTDR+SRGMDF  +  RA        E + V+HV+L+DFPRD  E++RRVGRT    RKG+VT+LA G+QV
Sbjct:  244 KVLLDCSLDGRGRASDKGTVETALQKKLDTLVSVLEARPLRRTIVFCNSVDGCRR----VENALNREDRREMKWKALPYHSAVSSDAAQRSLSTFSALNSLVPLVLVCTDRASRGMDFGFSAGRATGRPSDSIETAGVDHVILFDFPRDVAEWVRRVGRTGXXXRKGLVTILAQGKQV 417
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BLAST of mRNA_H-elongata_contig15422.3573.1 vs. uniprot
Match: W7TFZ4_9STRA (Dead-box atp-dependent rna helicase 50-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFZ4_9STRA)

HSP 1 Score: 144 bits (362), Expect = 7.350e-38
Identity = 83/167 (49.70%), Postives = 107/167 (64.07%), Query Frame = 1 
Query:   10 EKVLIDCSGPPGEPRNEETGMRRKRDALLSQLERRKVLRTLVFCNTIQGCRQASASVENILSRASRKGQ-FETLVYHSAIDPKKAAENMRQFMRSNALIPMVMVCTDRSSRGMDFDRAQARAEPSLVEHVLLYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQV 507
            E+VL+DCSGP  E RNEETG  RKRD L+  L +    R+LVFCN+I  CR+    VEN L RA R+ + ++ L YHSA++P+   +N+  F  S    P++MVCTDR+SRG+DFD A        V+HV+L+DFPRDP EY+RRVG          VT L  GRQV
Sbjct:  278 EEVLVDCSGPWEEERNEETGFVRKRDMLVQNLLKHPAPRSLVFCNSIPTCRK----VENALRRADRQEKRWQVLAYHSAVNPQDRQKNLDIFS-SRVERPLIMVCTDRTSRGVDFDTAD-------VQHVVLFDFPRDPSEYVRRVGXXXXXXXXXXVTALVLGRQV 432
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BLAST of mRNA_H-elongata_contig15422.3573.1 vs. uniprot
Match: A0A0C9RPX7_9SPER (TSA: Wollemia nobilis Ref_Wollemi_Transcript_28233_2443 transcribed RNA sequence n=1 Tax=Wollemia nobilis TaxID=56998 RepID=A0A0C9RPX7_9SPER)

HSP 1 Score: 143 bits (360), Expect = 7.310e-37
Identity = 79/167 (47.31%), Postives = 107/167 (64.07%), Query Frame = 1 
Query:   10 EKVLIDCSGPPGEPRNEETGMRRKRDALLSQLERRKVLRTLVFCNTIQGCRQASASVENILSRASRKGQ-FETLVYHSAIDPKKAAENMRQFMRSNALIPMVMVCTDRSSRGMDFDRAQARAEPSLVEHVLLYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQV 507
            E++LIDCSG  GE RN ET    K+ ALL  LE+  V +TL+FCN I+ CR+    VEN+L R  RKG+    L +H+A+  +    NM++F+ S +     ++CTDR+SRG+D            V+HV+L+DFPRDP EY+RRVGRTARAGR+G     A G+QV
Sbjct:  413 EEILIDCSGE-GEERNPETAFENKKTALLQLLEQSPVQKTLIFCNKIETCRK----VENVLKRYDRKGRKVSVLPFHAAVSQESRVSNMKRFLDSQSEQSRFLICTDRASRGLDLVN---------VDHVVLFDFPRDPSEYVRRVGRTARAGRRGKAFAFAVGKQV 565
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BLAST of mRNA_H-elongata_contig15422.3573.1 vs. uniprot
Match: A0A4D9D599_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D599_9STRA)

HSP 1 Score: 144 bits (362), Expect = 8.430e-37
Identity = 83/167 (49.70%), Postives = 107/167 (64.07%), Query Frame = 1 
Query:   10 EKVLIDCSGPPGEPRNEETGMRRKRDALLSQLERRKVLRTLVFCNTIQGCRQASASVENILSRASRKGQ-FETLVYHSAIDPKKAAENMRQFMRSNALIPMVMVCTDRSSRGMDFDRAQARAEPSLVEHVLLYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQV 507
            E+VL+DCSGP  E RNEETG  RKRD L+  L +    R+LVFCN+I  CR+    VEN L RA R+ + ++ L YHSA++P+   +N+  F  S    P++MVCTDR+SRG+DFD A        V+HV+L+DFPRDP EY+RRVG          VT L  GRQV
Sbjct:  544 EEVLVDCSGPWEEERNEETGFVRKRDMLVQNLLKHPAPRSLVFCNSIPTCRK----VENALRRADRQEKRWQVLAYHSAVNPQDRQKNLDIFS-SRVERPLIMVCTDRTSRGVDFDTAD-------VQHVVLFDFPRDPSEYVRRVGXXXXXXXXXXVTALVLGRQV 698
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15422.3573.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVR7_ECTSI5.610e-8786.14DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A836CPS5_9STRA3.280e-6667.86P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S4DKM7_HETAK3.250e-5156.21Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V2H4_9STRA3.670e-5155.03Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A0G4ET85_VITBC5.410e-4654.49Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
I2CPE5_NANGC8.590e-3949.70Uncharacterized protein (Fragment) n=1 Tax=Nannoch... [more]
A0A7R9YGA2_9STRA1.380e-3846.07Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
W7TFZ4_9STRA7.350e-3849.70Dead-box atp-dependent rna helicase 50-like protei... [more]
A0A0C9RPX7_9SPER7.310e-3747.31TSA: Wollemia nobilis Ref_Wollemi_Transcript_28233... [more]
A0A4D9D599_9STRA8.430e-3749.70Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15422contigH-elongata_contig15422:284..7623 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score277.3
Seed ortholog evalue4.7e-72
Seed eggNOG ortholog2880.D7FVR7
KEGG koko:K13179
GOsGO:0000003,GO:0001101,GO:0002376,GO:0003674,GO:0003676,GO:0003677,GO:0003724,GO:0003824,GO:0003916,GO:0003917,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006265,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006955,GO:0006968,GO:0006996,GO:0007049,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009058,GO:0009059,GO:0009507,GO:0009536,GO:0009605,GO:0009607,GO:0009620,GO:0009719,GO:0009723,GO:0009725,GO:0009751,GO:0009753,GO:0009814,GO:0009817,GO:0009987,GO:0010033,GO:0010501,GO:0014070,GO:0016043,GO:0016070,GO:0016462,GO:0016604,GO:0016605,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0022414,GO:0031974,GO:0031981,GO:0032870,GO:0034641,GO:0034645,GO:0035690,GO:0042221,GO:0042493,GO:0042623,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045087,GO:0046483,GO:0046677,GO:0050832,GO:0050896,GO:0051276,GO:0051321,GO:0051704,GO:0051707,GO:0051716,GO:0070013,GO:0070035,GO:0070887,GO:0071103,GO:0071229,GO:0071236,GO:0071310,GO:0071369,GO:0071395,GO:0071407,GO:0071446,GO:0071495,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0098542,GO:0140097,GO:0140098,GO:1901360,GO:1901363,GO:1901576,GO:1901700,GO:1901701
EggNOG free text desc.helicase activity
EggNOG OGsCOG0513@1,KOG0331@2759
EC3.6.4.13
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009,ko03041
Hectar predicted targeting categoryother localisation
Exons4
Model size507
Cds size507
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15422.3573.1prot_H-elongata_contig15422.3573.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig15422 284..7623 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929911.1259725-CDS-H-elongata_contig15422:283..4601622929911.1259725-CDS-H-elongata_contig15422:283..460Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15422 284..460 +
1691679205.282529-CDS-H-elongata_contig15422:283..4601691679205.282529-CDS-H-elongata_contig15422:283..460Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15422 284..460 +
1622929911.1419837-CDS-H-elongata_contig15422:2262..23431622929911.1419837-CDS-H-elongata_contig15422:2262..2343Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15422 2263..2343 +
1691679205.293082-CDS-H-elongata_contig15422:2262..23431691679205.293082-CDS-H-elongata_contig15422:2262..2343Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15422 2263..2343 +
1622929911.1574764-CDS-H-elongata_contig15422:6585..67111622929911.1574764-CDS-H-elongata_contig15422:6585..6711Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15422 6586..6711 +
1691679205.3027265-CDS-H-elongata_contig15422:6585..67111691679205.3027265-CDS-H-elongata_contig15422:6585..6711Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15422 6586..6711 +
1622929911.2141047-CDS-H-elongata_contig15422:7500..76231622929911.2141047-CDS-H-elongata_contig15422:7500..7623Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15422 7501..7623 +
1691679205.3182006-CDS-H-elongata_contig15422:7500..76231691679205.3182006-CDS-H-elongata_contig15422:7500..7623Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15422 7501..7623 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig15422.3573.1

>prot_H-elongata_contig15422.3573.1 ID=prot_H-elongata_contig15422.3573.1|Name=mRNA_H-elongata_contig15422.3573.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=169bp
MNSEKVLIDCSGPPGEPRNEETGMRRKRDALLSQLERRKVLRTLVFCNTI
QGCRQASASVENILSRASRKGQFETLVYHSAIDPKKAAENMRQFMRSNAL
IPMVMVCTDRSSRGMDFDRAQARAEPSLVEHVLLYDFPRDPIEYMRRVGR
TARAGRKGVVTVLAWGRQV
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mRNA from alignment at H-elongata_contig15422:284..7623+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig15422.3573.1 ID=mRNA_H-elongata_contig15422.3573.1|Name=mRNA_H-elongata_contig15422.3573.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7340bp|location=Sequence derived from alignment at H-elongata_contig15422:284..7623+ (Himanthalia elongata Himel1 dioecious)
ATGAATTCTGAAAAGGTGTTGATCGACTGCAGCGGGCCTCCGGGTGAACC
TCGAAACGAAGAAACCGGGATGAGGAGAAAACGCGACGCGTTGCTGTCAC
AGCTTGAGAGGAGAAAGGTCCTGAGGACGCTTGTGTTCTGTAACACCATT
CAAGGCTGCAGGCAGGCAAGTGCAAGTGTAAGTGGCGTAAAGGCGGTGCG
GATCAGTATCCTGGATGAGTATCCTGAATCATTATCCTGGATGAGTATCC
TGTATCAGTATCCTGGATGAGTATCCTGTATCAGTATCCTGGATGAGTAT
CCTGTATCAGCATCCTGGATGAGTATCCTGTATCAGCATCCTGGATGAGT
ATCCTGTATCAGTATCCTGAATGAGTATCCTGTATCAGTATCCTGGATGA
GTATCCTGTATCAGTATCCTGGATGAGTATCCTGTATCAGTATCCTGGAT
GAGTATTCTGTATCAGTACCCTGAATGAGTATCCTGTATCAGTATCCTGG
ATGAGTATCCTGTATCAGTATCTTGGATGAGTATCCTGTATCAGTATCCT
GGATGAGTATCCTGTATCAGTATCCTGGATGGATATCCTGTATCAGTCTC
CTGACTGAGTATCCTGTATTATCCAAGCCTTTCGATGGCGTGGTTGTACT
TGATCTGACTTGATTCGTTTCCCTGGCTGCTACCTCTATAGTTATCTCGG
ACTTACTTGCCTTTCCCCCCTTTTCCTACCACGTAGAGTGCCATACCATA
TTATATCATATTGTACCATACTAAGGTATTACATTCAATGATAACTCCGG
CTGTCGATGTATGTGTCGTTGTGGATGTCAATGCTAATGTTAATGATAAT
GTCAATGAGGATGTGAATGCCATCCCGCCTATGCCTGTAGAGCTTATGTC
AAGTATCGCTCGGTGTATGTATGTATGTATGTGTGTGTGTTTGTGTGTTT
TTATTAAATTGCACATAACTGCGCATTGTCGTGCTCGTCATTCTAGACTA
CTCACATTGGTCCTCCCAATAGCGGATCAATAATATTTGCTACAAAAACT
GTGTGTGTATATATTTATTAAATTGTACATAACAGCGCAATCCGGCCCTG
TCATGCTATTAATAGTCATTCTAGGCTACTTATACTGCAGGTATAACCCA
CCTGGGGGTTATTGTTGTTTGATTGCTTGCGTGTTCTTGACATTGACCGA
TCGAGCCTCAGCCATACCCACTATACTGTTTATAGACTAAGCCTACCAAT
AATAATAATTAATACCGTCATTAAAGTCAATATACTTGTTAGAGTAAATA
TAGTAGAGGCAGTATATGCAGTGTAGGCGTTATCTTACCAAAACGATAAG
ATCCAAGGGCGAAGCAAGTAATACTTTAATAGTGGTAGTAATAGCGATAG
TATTAGTAGTAGTAATATACACATTCGAACCTGACGGCAGTTGGTCCCCT
GGACTTTTACTACTCGTGGTATAAGGATGGTTGATTAAGGCCATGTTTTT
AAGAAGGAAAAACAAAAGAAATACAAAATAGTAAAAACCCCCAAAAGAAA
CACAAAATAGTAAAAAAGAAGAAGAAACCCCCCCAAAACCAAAAGTTAAA
AAAACCAACTGCCGAAGCGAAACAAAAATTCTTCTTCCTCCCAGGGGCAA
TAATATAATCTCATAATCTACATGAACAAGCATGTCAAAGCAAAGGAGAG
GCGATGCTAAGAAACACGAAAATATACCTACCAGGTACATGATATTAATA
AGGCGTCCTGACCACGGGTAATCGGTTCATGGTCGGATAATCGGTAGGGT
TCTCCTTCCGCAGTTGCCTTGAGAGCATGAGAGCCTAGAGAGCCAACGTA
AGTCATTTGATGTTGGAGCAAGGCCAGCTTTTGGCAATGACACTTCCAAT
TGCAATGGAAGTTCGATGCCCGGGATGCGACGTGCTCGATGCTCCATGTG
ATCGCCTTTTGTTTTGTGGGGTTGGGCAGGTGGAAAACATCCTCAGTCGT
GCCAGCCGGAAGGGCCAGTTCGAGACCCTGGTGTACCATTCCGCCATCGA
CCCCAAGAAGGTAAGGGAGATAGTATTAATAGGTTTTATTTTAGAGGCTC
TATACCATGGCGTTGGTCAAAGCTTTTGATACTGTACTGCCAGTACTGTG
TCGCACATATTTTAGCTACCGGCAGTCAGTCGCTTGTGCTCCATTCATCT
CTAATAATAGCTCTATTAATATACCACTATATTCGGGCATAAATGTCCAG
TACGGAAAAAATGCGGCATAACGTTTGCCGTTTTGCGACTTAGAAAAAAA
GTTTTTCCTCATCCGATTTGTGGCATACATACAAGACTGTCAAGACCACT
TTTATTTATTTATTTTTTCGTCAGTTATGCCGAATCTTATGGATCAGGAA
AAAAGTGATCGAAAACTTTTTTTCTGATAACGGCCATAAACTCGAGTTGA
TGGATCAGAAAAACACGTTTTCGGAGCACTTTTTTTCTGACGAAGCGCTT
TCGGAGGGGCAGTTGGTCAGAAAACCCGGAAAAAATGGAGGAAGAAGTTA
TCAGAAAAAAGGTTGTCAGAAAAATAGTTAGTAGCGATATGAAGACGTCC
CCCAGACGGATGGACGCAAAGTTCTAATCTGCCTTCAAACAACACAGACC
TCGTGGAGATTGGAGACAGGCATAGATAACTGTGTCCTAATCTGCCAGCT
GTATTGTGTGTGTACAAATCTCACTCGAAGACCTTCTTTTGTGCGATGCC
ACATTAGTACGTGTTTAATCAATCTAATGGCATAAGACTACCCGTAGCAG
TACTTGGCGGTGTTTTGCGGTTGGCAGCAAAGTTATCACAACGTACTACT
TGTGGAAGGTATAAGTTGAACGTACTTCACGATACGCGACATATATATGT
AGTCGGATTTCTTGCAGACGTATAGGTAGATAACATTAAACATACTCTAC
GGTAGAAGACAACTATCTGTACTCGTAGTACGTGCAGACACACACGTAGA
TTCCTCGGCCGTTGAATCGACTTGTGGTAACTTTTTTCTACGTTTTAGAT
ACCTGTACATATAAATACGAGAGGCATCCCCCGGGCCTAAGCGACGGTGC
AGTTGGCAATAGGAGTACTTTCAGCAGTATTCCTCCAAGTACTGATGATG
TAGCTTTCTTTCGCCGCGTTGCGCCATATTGACTGTGCCAGTAGTACGGT
GTACGAAATGCCGTGGCTGAACTGTCTGTAGTTGCTTCTTGTGCAGCGAT
AGAGGTTCAGGATTGGCTTGGCTCGCTCGTATTTTGATAACGTATCCCGG
TGACTGTCGGTTATAAAAGTCGAGCGATGACAGCAGTGACTGAACCTTGT
TTTATCGCGAAAAACATAACTGATAACGATACTACACGGCCGTTATATTT
CCTCTCCTGTATTGCAGGCGCTTTCGTAAGGCCACCCCGCGAAAATTTCA
ATTACGAAAGCTACCCTTTGGGGACTCGCCATTGAAAGTGTACAAGCACC
GACAACAAATCCTCTCACGGTGCTAAGAAAGCGCCGATGTTCGGAGGGTT
TGAATAAGTTCATATTTTTTATTTTAAAAAATAAATTAATGATGACAAAA
AAACGGATCCATAAACCGCGTCGCACAGTGTCCTCACCAGAAAATTTCTT
ATCAGAAAAAAAGTTTTTGATCACTTATTTTTTTCTGATTCGTAAGATTC
GGCCTTAGTATACCACCGCTACACGCAAGTGAACAGCATGATTTTGATCT
CACTTGCGCAATCCTCGGGTTGGAGACCTTCTCGTGGTCGGCTGAAACAT
GTCTAGCGGTCCAGAGGTGGCCCAGACCACCAGCAAGAAAAACCTCACAA
ATGATGAGCGAAAAGCTGTGCTTGCTGAGCTCCAGTTAGGAAGCAAGTCA
GTTGTGAAGACATCGTAGAGAGTGAAAACCCGGGGATGATATGTCGACGT
CCCCTGGTCGCCCCCGCTCTTTTTTTTTCACTTCCCCCTTCCTCCTATAC
AAAATCCCGATACATTTTGTGGTTAGAGGCAGCGAACGACGCATTAAAGC
AGTGGATCTTCAAAACAGACATTTATTCCCGAACACACGTACCGAACATT
TATTCGATATCTATTAATAGCTCCAGCTGTATGAATAGCACTAAATAGTT
TTGATTGGTTGATTGATCGATTGATATATTGATTGATTGACACTCATGTT
ATGCATATTGAGCCTTGGAGTAACAGCTTAATACTTTAATACTACAAAAT
TAAATTCTATTATAATAGTAATATTATTATAGTATGAATCATGGTCTCAA
AGAGGTACGAAGGTCAACGGGTCGCCCCGGTGGTTTAGTTGGTAACCTCG
AAAACGTCTGACGTTGGGCACGTGAGTTTGAATTTCGGCGAAGTCTCACG
AACTGGGATTTCCTCTCACATCATGCCTAACAAATGCAGACAGATTATTT
CGTGAGTGCACAAAATTCGACATACTTCACGGTGGACTAGAGAAAGGGAC
GGCTGAATCCTTCTCGCGACAAAAAATTAAGGCACTCACCGCAAGAGGGA
GGTGGGGAAATCTTGTTTGACCTTCCTCCTGTGTGACCCCGACTGGTGCG
TCCACAAGTCTGACATCGAGACTAAATGGGATGACAACAGCAACACCATC
TTCGTGACTCACCCCGCCACCCGCACCACCAGGGATGCGAAATCACCTCA
AAAATCTTATACAGCACCCGCGTCACAGCGATATCCTTGGGTTGGATTCG
AACTATCTACAGTACAGAACAGTATTAATAGTGTCTATTGTCTGAAGTGC
TGATTGTAATCCAGAGATCTGAAGATCTGAAATACATGCTTCGAAGGCTG
CTAAAAAATCTGCAATAAAGGCTAAGGGCAAGTCTACATTTCCCTCCGAT
ACTGTCTGTGACTGTATCGCACATGTCCATTGTACCAATAGCGGGTGTGC
GAAAAGAGAGGGTCACAATAATTATTGGCCCATGGGCTTTTACCCGAATA
GGCTGCACCCGTTACTCAAGCTACCTTGAGTACTGCTGGCTCAGTGCCAG
CGGGCTCTCGGTGGTAAACGCCATCGATACTTAATTGCGTGACATGATGA
AATCGGGATTTTTGCCCGATGGCGGTTGACGGTAGAGATGGACGTCGTCG
CGGAAAACGAGAGGATCGAGAGGATCCTGGGAGTACGGACCAGATTCAGC
ATTGGATTGGGAAAATGAGCAGACTGACGCGAGACGGGACTGTCGAACCC
GTCTCGCGAGGCCAAATTCCCAGACACGAACTTGGATAGGGAAAATTCAT
ATTCCTTTCTTATCATTTTCCATTAAACCACGCAAACCGGCATGATACGA
AAGGGGGCGCCACGCCAGTTTGCAAATACGCTTCCCTATGGGGAGCTATC
CCTGAAGACATTGCCTGTTCAGCTGAACACGAGCAGAAGGCAACCAAATC
CGGTTGATCCATACTTTGCTATACGTGGTACTAGTATGTGATTACCAAAC
ATATACAAGGTGTGCGACACTCAAGAAGACTTTCCCACAAGCGATGATAA
TCCGCTAGATTGGAAACGGTACGGAGGCCTCAACCGAGCTGTGGAAAGAG
AGGGGCGGGGCCGTAGAGGCATTCGAAATGCCAACGCCCTGGGGCGTTGC
GCCAAGAGGTGGGACAGCAAGGGCAGGAGGGAGAGTTGTAGCGGTAATCC
GGCGCGGTTGCGTAAGGAACGCGAGTAGGATAGGCCAATCCAACGTCTTT
AGGGATAGCTCTCTATAAGGGGGGAGTATTCGCAAATCAGCGTGGCACCC
CCTTACGTGTCATGTCGGTTTGCGCGGTCTAATGCAAATTGATAAAACGT
TACTACAATGCCGCTTGTATTATGCACTATTGCCGCTTTTTTTTGTATAA
GAGTACGTATTATTAATACGTTTTAATTCCGGGTGGGGTGTGTTTCTACC
TTGTGACCACCGTCTAGATTTTGACGTCAGCTTATTATGTGATAATTCAA
CAAAATCAAACATGCATAAATATATTCCTTTATACTTCTAGATACTTTTA
TATATCAATGCAACATCCGCATGGTTACTTAAGAGCTAATCCTTTACATG
GTGATACTAATGATGATGGTGATAGTAATGGTGATACTAATGATGATGAT
TATGGTGATGATACTAATGATGATGATACTAATGATGATGATGATGATAA
TGATGATAATGATGATGATAATGATGATGATGATGATGATGTTGATAGTC
AGAATGATGATGATAATGGCGGTGATGATGCAATTGAATTTTTGTGAGGC
AGGCGGCGGAGAACATGCGGCAGTTCATGCGTTCTAACGCCTTGATCCCG
ATGGTGATGGTGTGCACAGACCGTTCTTCCAGGGGAATGGATTTCGACCG
GGCGCAGGCAAGAGCAGAGCCCTCCCTAGTCGGACCGCTTGCTATAACTG
TCACTGCAGCTTCTAGACTACCTGGTAATTACTAAAGTTTCTAGAGTCTA
CAGACCGTTTTGCCCCGAGAATTTCAATTGTGACTAATGTCAGAAGTAAT
ATTACTACTAGTAGTAATAGCAATAAGGGTAATAGTCATTTTCCGGTGTT
CACAGTGTTGGCGATAATGGCCACAGTAGAGATATAGAGATTAGTAATGT
GAAAAGTAATAGTATTAATATAAGTAATAGAAATAGCAGTATAATAGTAA
TTTTGCCGGTGTTAACAGTCTTGTGATATAGAGGTGTAGACATAATATTA
CTAGTAAGCGTGATTTTTGCTGTTCTCAAGACTTCGCGGTGAGATGCAAT
ACCCACGCGATTGAAGAGCAGTCGAAGTAAGTTAACCGTAATACTAAATA
TATTAAATTATGCGGTATATTGCAATCCCAGGGGTGACGTGACGTGACGT
GCTCCTTACAATTAATGTCCTTGTCCACCTCGAGGTGAATGCTGGATGCT
GGTAGCTATAATCACGTCACGTGGCGTCTATGCTGGTGTTCTTATATAGG
CTCCATGCTGGTGTCATAACATGTTAACGCCAACACTTGTCATGTCATTT
GGAGATCCAACCCACCTCACTTGTATGCGGTACTCATCAAGGCAGAAATG
CTTGTTGATGAGACGCGGCAGACCCGAGAATCTGTTAGTGTATATTGGAA
TTGATTGACATCTAATTCACATCTACATGACACGACCATGACACCATCCA
CAACTCTCCTGAGACAGGTGGAGCACGTGCTCCTGTACGATTTCCCTCGA
GATCCGATCGAATACATGAGAAGAGTCGGCAGGACAGCCAGGGCGGGGAG
GAAAGGGGTCGTGACCGTGTTGGCCTGGGGGCGTCAGGTG
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Coding sequence (CDS) from alignment at H-elongata_contig15422:284..7623+

>mRNA_H-elongata_contig15422.3573.1 ID=mRNA_H-elongata_contig15422.3573.1|Name=mRNA_H-elongata_contig15422.3573.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1014bp|location=Sequence derived from alignment at H-elongata_contig15422:284..7623+ (Himanthalia elongata Himel1 dioecious)
ATGAATTCTGAAAAGGTGTTGATCGACTGCAGCGGGCCTCCGGGTGAACC
TCGAAACGAAGAAACCGGGATGAGGAGAAAACGCGACGCGTTGCTGTCAC
AGCTTGAGAGGAGAAAGGTCCTGAGGACGCTTGTGTTCTGTAACACCATT
CAAGGCTGCAGGCAGGCAAGTGCAAGTATGAATTCTGAAAAGGTGTTGAT
CGACTGCAGCGGGCCTCCGGGTGAACCTCGAAACGAAGAAACCGGGATGA
GGAGAAAACGCGACGCGTTGCTGTCACAGCTTGAGAGGAGAAAGGTCCTG
AGGACGCTTGTGTTCTGTAACACCATTCAAGGCTGCAGGCAGGCAAGTGC
AAGTGTGGAAAACATCCTCAGTCGTGCCAGCCGGAAGGGCCAGTTCGAGA
CCCTGGTGTACCATTCCGCCATCGACCCCAAGAAGGTGGAAAACATCCTC
AGTCGTGCCAGCCGGAAGGGCCAGTTCGAGACCCTGGTGTACCATTCCGC
CATCGACCCCAAGAAGGCGGCGGAGAACATGCGGCAGTTCATGCGTTCTA
ACGCCTTGATCCCGATGGTGATGGTGTGCACAGACCGTTCTTCCAGGGGA
ATGGATTTCGACCGGGCGCAGGCAAGAGCAGAGCCCTCCCTAGCGGCGGA
GAACATGCGGCAGTTCATGCGTTCTAACGCCTTGATCCCGATGGTGATGG
TGTGCACAGACCGTTCTTCCAGGGGAATGGATTTCGACCGGGCGCAGGCA
AGAGCAGAGCCCTCCCTAGTGGAGCACGTGCTCCTGTACGATTTCCCTCG
AGATCCGATCGAATACATGAGAAGAGTCGGCAGGACAGCCAGGGCGGGGA
GGAAAGGGGTCGTGACCGTGTTGGCCTGGGGGCGTCAGGTGGTGGAGCAC
GTGCTCCTGTACGATTTCCCTCGAGATCCGATCGAATACATGAGAAGAGT
CGGCAGGACAGCCAGGGCGGGGAGGAAAGGGGTCGTGACCGTGTTGGCCT
GGGGGCGTCAGGTG
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