mRNA_H-elongata_contig153781.3549.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig153781.3549.1 vs. uniprot
Match: D8LM14_ECTSI (Acetyl-CoA carboxytransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM14_ECTSI) HSP 1 Score: 216 bits (549), Expect = 2.850e-62 Identity = 103/122 (84.43%), Postives = 111/122 (90.98%), Query Frame = 1
Query: 25 DLQAALDYTLARKIDRYQAQDVMTTVFEDYVELSGDGHVSDDFCLKGGLARIGGVAVVVMGTVKGHTPGDMQAANYGMPSPAGYRTALRLFYLAERFGLPVVTLVDTCGAWPSFEVSAENEN 390
D++AALDYTLARKIDRYQAQDVM+ V ED++EL GDG VSDDFCLKGGLARIGG VVVMGTVKGHTPGDMQAANYGMPSPAGYRTALRLF LAERFGLPVVTLVDTCGAWPSFE + ++
Sbjct: 285 DMEAALDYTLARKIDRYQAQDVMSEVLEDFIELCGDGKVSDDFCLKGGLARIGGTPVVVMGTVKGHTPGDMQAANYGMPSPAGYRTALRLFQLAERFGLPVVTLVDTCGAWPSFEAERDGQS 406
BLAST of mRNA_H-elongata_contig153781.3549.1 vs. uniprot
Match: A0A7S3Y4I5_HETAK (Acetyl-CoA carboxytransferase n=2 Tax=Sar TaxID=2698737 RepID=A0A7S3Y4I5_HETAK) HSP 1 Score: 160 bits (405), Expect = 7.380e-43 Identity = 75/135 (55.56%), Postives = 99/135 (73.33%), Query Frame = 1
Query: 25 DLQAALDYTLARKIDRYQAQDVMTTVFEDYVELSGDGHVSDDFCLKGGLARIGGVAVVVMGTVKGHTPGDMQAANYGMPSPAGYRTALRLFYLAERFGLPVVTLVDTCGAWPSFEVSAENENMLRAQSNIPFSHL 429
++ A DYT +R +DRYQ QD+M +F D+VELSGDG V D C+KGGLA+ G+ VVV+G+ KGH+P DM+ ANYGM SPAGYRTALRL LAERF +PV+++VDTCGAWPSF + ++ A + + + L
Sbjct: 331 EINAPADYTKSRSMDRYQGQDLMMELFTDFVELSGDGRVGTDPCMKGGLAKFNGMPVVVVGSTKGHSPKDMKDANYGMSSPAGYRTALRLMKLAERFDIPVISIVDTCGAWPSFVAERDGQSEAIATNLVEMAGL 465
BLAST of mRNA_H-elongata_contig153781.3549.1 vs. uniprot
Match: F0XWB2_AURAN (Acetyl-CoA carboxytransferase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWB2_AURAN) HSP 1 Score: 152 bits (383), Expect = 6.750e-40 Identity = 76/125 (60.80%), Postives = 90/125 (72.00%), Query Frame = 1
Query: 19 ARDLQAALDYTLARKIDRYQAQDVMTTVFEDYVELSGDGHVSDDFCLKGGLARI-GGVAVVVMGTVKGHTPGDMQAANYGMPSPAGYRTALRLFYLAERFGLPVVTLVDTCGAWPSFEVSAENEN 390
A DL A DYT +R +DR Q +D+ +F D+VEL+GDG V D CL GGLA GG VVV+G KGH+ ++ A NYGMPSPAGYRTAL+LF LAERFGLPVVT VDTCGAWPSFE ++
Sbjct: 277 AADLAATPDYTASRALDRPQYEDLRDLLFADFVELAGDGRVGRDACLSGGLATFRGGPPVVVLGCRKGHSAAELAAHNYGMPSPAGYRTALKLFRLAERFGLPVVTFVDTCGAWPSFEAEGAGQS 401
BLAST of mRNA_H-elongata_contig153781.3549.1 vs. uniprot
Match: A0A0G4HNQ6_9ALVE (Acetyl-CoA carboxytransferase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HNQ6_9ALVE) HSP 1 Score: 144 bits (363), Expect = 3.240e-37 Identity = 69/116 (59.48%), Postives = 86/116 (74.14%), Query Frame = 1
Query: 43 DYTLARKIDRYQAQDVMTTVFEDYVELSGDGHVSDDFCLKGGLARIGGVAVVVMGTVKGHTPGDMQAANYGMPSPAGYRTALRLFYLAERFGLPVVTLVDTCGAWPSFEVSAENEN 390
+YT ARKIDR Q QD++ +F D+VE++GDG V D C+KGG+A G VV+ T KGHTPGDMQ ANYGMPSP GYRTA RL AERF +PVVTL+DT GA+P+F+ E ++
Sbjct: 255 NYTRARKIDRPQTQDLIRELFTDFVEMAGDGKVGLDVCVKGGIAAFRGHPCVVIATSKGHTPGDMQKANYGMPSPHGYRTAYRLMQTAERFSIPVVTLIDTVGAYPNFQSEKEGQS 370
BLAST of mRNA_H-elongata_contig153781.3549.1 vs. uniprot
Match: A0A7S3NKJ5_9STRA (Acetyl-coenzyme A carboxylase carboxyl transferase subunits beta/alpha n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKJ5_9STRA) HSP 1 Score: 130 bits (328), Expect = 1.720e-32 Identity = 65/129 (50.39%), Postives = 82/129 (63.57%), Query Frame = 1
Query: 19 ARDLQAALDYTLARKIDRYQAQDVMTTVFEDYVELSGDGHVSDDFCLKGGLARIG-----GVAVVVMGTVKGHTPGDMQAANYGMPSPAGYRTALRLFYLAERFGLPVVTLVDTCGAWPSFEVSAENEN 390
A ++ DY +R I R Q D +F Y+ELSGDG V D C+KGG+A + +V+G KGHTPG+MQA NYGMPSPAGYRTA RL +A+RF LP++T VDTCGAWPSF ++
Sbjct: 251 AEEMAKEPDYAASRAITRPQYADFRDALFYGYIELSGDGQVGSDPCIKGGVAFLHVSNDTDFPCIVIGCGKGHTPGEMQAHNYGMPSPAGYRTAKRLMEMADRFHLPIITFVDTCGAWPSFRAEEAGQS 379
BLAST of mRNA_H-elongata_contig153781.3549.1 vs. uniprot
Match: A0A5J4VDQ8_9EUKA (Acetyl-CoA carboxytransferase (Fragment) n=1 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4VDQ8_9EUKA) HSP 1 Score: 120 bits (300), Expect = 1.850e-29 Identity = 62/137 (45.26%), Postives = 82/137 (59.85%), Query Frame = 1
Query: 43 DYTLARKIDRYQAQDVMTTVFEDYVELSGDGHVSDDFCLKGGLA---------------------RIGGVAVVVMGTVKGHTPGDMQAANYGMPSPAGYRTALRLFYLAERFGLPVVTLVDTCGAWPSFEVSAENEN 390
D+ +RK+DR QAQD+ V +D++E+ GDG + D C+ GG+A + G VVV+GTVKGH+ D +A YGM +P+GYRTAL+LF AERF LPVVTLVDT GA PSF ++
Sbjct: 257 DHNRSRKLDRVQAQDIFGNVLKDFIEIRGDGQIGIDSCVHGGIAILPYIETDNETDKQSDSEPKSQTKGYPVVVIGTVKGHSEADFASAGYGMATPSGYRTALKLFNFAERFSLPVVTLVDTVGAEPSFSAERAGQS 393
BLAST of mRNA_H-elongata_contig153781.3549.1 vs. uniprot
Match: A0A0A1UA80_ENTIV (Acetyl-CoA carboxytransferase n=1 Tax=Entamoeba invadens IP1 TaxID=370355 RepID=A0A0A1UA80_ENTIV) HSP 1 Score: 121 bits (303), Expect = 3.990e-29 Identity = 62/129 (48.06%), Postives = 83/129 (64.34%), Query Frame = 1
Query: 43 DYTLARKIDRYQAQDVMTTVFEDYVELSGDGHVSDDFCLKGGLARIGGVAVVVMGTVKGHTPGDMQAANYGMPSPAGYRTALRLFYLAERFGLPVVTLVDTCGAWPSFEVSAENENMLRAQSNIPFSHL 429
+Y +R+ DR Q D++ VF+ ++EL GDG V D C+ GGLA G V+ + KGH P +M +N+GM +PAGYRTA RL LAE+FGLPV+TLVDT GA+PSFE E + A S + + L
Sbjct: 247 NYNDSRREDRVQGIDILNKVFDGFIELHGDGKVGSDKCVCGGLATFKGYPVMAICMKKGHNPNEMIDSNFGMATPAGYRTASRLMKLAEQFGLPVITLVDTPGAYPSFESEIEGQPEAIAYSLVTMASL 375
BLAST of mRNA_H-elongata_contig153781.3549.1 vs. uniprot
Match: A0A812R381_9DINO (Acetyl-coenzyme A carboxylase carboxyl transferase subunits beta/alpha (Fragment) n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812R381_9DINO) HSP 1 Score: 120 bits (300), Expect = 9.920e-29 Identity = 64/120 (53.33%), Postives = 84/120 (70.00%), Query Frame = 1
Query: 43 DYTLARKIDRYQAQDVMTTVFEDYVELSGDGHVSD--DFCLKGGLARI-GGVAVVVMGTVKGHTPGDMQAANYGMPSPAGYRTALRLFYLAERFGLPVVTLVDTCGAWPSF--EVSAENE 387
DY +R++DRY + D++ + +++L GDG D CL+ GLA + G +VVVM KGHTP D + N+ MP+PAGYRTALR F LAERFGLPVVTLVDT GAWPSF E++ ++E
Sbjct: 260 DYLKSRRLDRYDSTDILKQLSVRFIDLGGDGKGPHGLDKCLRCGLATLQSGRSVVVMRCCKGHTPVDREKHNHAMPAPAGYRTALRFFDLAERFGLPVVTLVDTVGAWPSFAAEMAGQSE 379
BLAST of mRNA_H-elongata_contig153781.3549.1 vs. uniprot
Match: A0A813D2P8_9DINO (Acetyl-coenzyme A carboxylase carboxyl transferase subunits beta/alpha n=2 Tax=unclassified Symbiodinium TaxID=279888 RepID=A0A813D2P8_9DINO) HSP 1 Score: 120 bits (300), Expect = 1.020e-28 Identity = 64/120 (53.33%), Postives = 84/120 (70.00%), Query Frame = 1
Query: 43 DYTLARKIDRYQAQDVMTTVFEDYVELSGDGHVSD--DFCLKGGLARI-GGVAVVVMGTVKGHTPGDMQAANYGMPSPAGYRTALRLFYLAERFGLPVVTLVDTCGAWPSF--EVSAENE 387
DY +R++DRY + D++ + +++L GDG D CL+ GLA + G +VVVM KGHTP D + N+ MP+PAGYRTALR F LAERFGLPVVTLVDT GAWPSF E++ ++E
Sbjct: 404 DYLKSRRLDRYDSTDILKQLSVRFIDLGGDGKGPHGLDKCLRCGLATLQSGRSVVVMRCCKGHTPVDREKHNHAMPAPAGYRTALRFFDLAERFGLPVVTLVDTVGAWPSFAAEMAGQSE 523
BLAST of mRNA_H-elongata_contig153781.3549.1 vs. uniprot
Match: A0A1Q9C6P9_SYMMI (Acetyl-coenzyme A carboxylase carboxyl transferase subunits beta/alpha n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9C6P9_SYMMI) HSP 1 Score: 120 bits (300), Expect = 1.030e-28 Identity = 64/120 (53.33%), Postives = 84/120 (70.00%), Query Frame = 1
Query: 43 DYTLARKIDRYQAQDVMTTVFEDYVELSGDGHVSD--DFCLKGGLARI-GGVAVVVMGTVKGHTPGDMQAANYGMPSPAGYRTALRLFYLAERFGLPVVTLVDTCGAWPSF--EVSAENE 387
DY +R++DRY + D++ + +++L GDG D CL+ GLA + G +VVVM KGHTP D + N+ MP+PAGYRTALR F LAERFGLPVVTLVDT GAWPSF E++ ++E
Sbjct: 836 DYLKSRRLDRYDSTDILKQLSVRFIDLGGDGKGPHGLDKCLRCGLATLQSGRSVVVMRCCKGHTPVDREKHNHAMPAPAGYRTALRFFDLAERFGLPVVTLVDTVGAWPSFAAEMAGQSE 955 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig153781.3549.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig153781.3549.1 >prot_H-elongata_contig153781.3549.1 ID=prot_H-elongata_contig153781.3549.1|Name=mRNA_H-elongata_contig153781.3549.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=143bp PTYTIFARDLQAALDYTLARKIDRYQAQDVMTTVFEDYVELSGDGHVSDDback to top mRNA from alignment at H-elongata_contig153781:2..1067- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig153781.3549.1 ID=mRNA_H-elongata_contig153781.3549.1|Name=mRNA_H-elongata_contig153781.3549.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1066bp|location=Sequence derived from alignment at H-elongata_contig153781:2..1067- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig153781:2..1067- >mRNA_H-elongata_contig153781.3549.1 ID=mRNA_H-elongata_contig153781.3549.1|Name=mRNA_H-elongata_contig153781.3549.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=858bp|location=Sequence derived from alignment at H-elongata_contig153781:2..1067- (Himanthalia elongata Himel1 dioecious)back to top |