mRNA_H-elongata_contig1536.3534.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig1536.3534.1
Unique NamemRNA_H-elongata_contig1536.3534.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig1536.3534.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE)

HSP 1 Score: 652 bits (1682), Expect = 2.600e-215
Identity = 350/724 (48.34%), Postives = 467/724 (64.50%), Query Frame = 2
Query:    8 IALTSASTIHVDGRSSFSNNEANDDGGAIYASGSWVFIENGTHFISNIAHTGSGGGVYTSRAVVAIYGAIFTQNRGVWGGGIAHFSSGSTWNKNVDYSGPANVTGCTFAGNVAVDGGAMYSAAGYDMVVNCSFSENFAVVQXGALLHSGVLAVLTQSIFESNRAGQDGLAVMSLGLAENISDVAFRNNSFFCGSGKYGYEEN---DEVSDTCRFDVVCSRCASQCDEAPSSIDL-NGATVPVCEVVPTGVNTSAESGMTVEALDLLNGYYRTSNRSRNVMECYRLEACVGGSNADHYCAQGYTGPYCATCEARYGSGFQYSCHGCQGYDKMATVGGAISVLALIFIAVTLMVSYLVCVVEIPVSVGNGSWKKRLSDFRDSVISAIPLTAIKIVVAAWQIITQFSSVVRVQYPPAYEKFMSALNVVNMNLGDILSLSCVLETNFYVQLVLATLGPIVVLGVLAVTYQVAKARNGHSIPAMQKAKEKHVSVALFLLFVVYSSVSYTIFQTFNCDTLDSGVVYLRADYSLECFTSTHSVYTTYAGFMVLVYPVGIPIGFSWLLLKTRHGINNVNATPRP-GVQPHPESLEAVDAIKDLWAPYKPNRYFYEVIECGRRVVLTGLAAFIYPGSTAQVAIEALFAVIFYAISEILSPFAYPLDAWLYRSGSWVTYLSMYLALLLKADAAGVESYSQSVLAGLLIAAHCGMICVLVAHALLPALKRLTQIR 2164
            IA+T  S++ + G   F  N+A ++GGA     S V  E GT F  N                                         S ++ +   SG  N T C F GN AVDGGAMYSAAGYD + +C F +N AV   GA LHSGVL  L +S F  NRA   GLAV SLG+A NI+D  F +N+++C SG+YGYE     DEVS TCRF VVCS CA+ C++ P S+ + N A VP+CE   TGV+TS + G+T+  L+LL GYYRTS  S+NV++CY+ EAC+GG++   YC +GY G YCA C+  Y SG+Q+SC  C G +  + +G ++++  +  + + L+++ LV VV+        +W KRL+  RD ++ A+PLT+IKIVV AWQI+TQFSSVV V YP  YE F++ LNVVN +LG +LS+SC+++ NFY +L   T+GP+VV G LA TY ++++RN HS   MQ AK KH+S+ALF+ FVVYSSVS+ IFQTF C+TLD GV YLRADYSL C T  H+    YAG M+LVYPVGIP  +SW LL  RH +  V  +    G  P    L+ +  ++DLW+ YKP RY++EV+ECGRR+ LTGLAAF+ P S AQVAIE + A IF A+S++LSPFA P D WLYR+G+W+ + SMYLALLLK DA+  +S SQ+  A +LIAAH GM+ V++  A+L   + L  +R
Sbjct:  351 IAVTGGSSLSISGPIPFRYNKAQENGGAXXXXXSTVVTEEGTLFDGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLFDDDDPGSGSVNATMCVFQGNSAVDGGAMYSAAGYDGIKDCRFEDNLAVGSGGAYLHSGVLVELDRSTFVGNRARDAGLAVQSLGIAGNITDTTFESNTYYCSSGQYGYEYEIGEDEVSGTCRFGVVCSSCAASCEDNPGSVVVVNDAHVPICETAMTGVDTSGDGGVTLPELNLLRGYYRTSAESQNVLKCYQEEACIGGTDVSQYCQEGYRGAYCAVCDEGYASGYQFSCSICDGENLRSAIGTSVALFFVALVGIALVIADLVRVVDEVEPDTASTWGKRLTSCRDRIVKAVPLTSIKIVVVAWQIVTQFSSVVNVVYPDIYESFLAVLNVVNFDLGFLLSVSCIVDVNFYGRLFFTTVGPLVVFGGLAATYAISRSRNRHSPAGMQAAKSKHLSIALFISFVVYSSVSFNIFQTFVCETLDDGVTYLRADYSLTCSTGVHTAMMAYAGLMILVYPVGIPTVYSWWLLSNRHDLVKVGTSGNCLGGAPR---LDHLQPMRDLWSSYKPRRYYFEVLECGRRIALTGLAAFLLPDSAAQVAIEVVLAAIFMAVSDVLSPFADPFDGWLYRTGAWIIFFSMYLALLLKVDASDEDSQSQAAFAKVLIAAHVGMVLVVLVQAVLSVRRGLVTMR 1071          
BLAST of mRNA_H-elongata_contig1536.3534.1 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE)

HSP 1 Score: 481 bits (1239), Expect = 1.230e-150
Identity = 284/670 (42.39%), Postives = 394/670 (58.81%), Query Frame = 2
Query:  197 VAIYGAIFTQNRGVWGGGIAHFSSGSTWNKNVDYSGPANVTGCTFAGNVAVDGGAMYSAA--GYDMVVNCSFSENFA---------------------VVQXGALLHSGVLAVLTQSIFESNRAGQDGLAVMSLGLAENISDVAFRNNSFFCGSGKYGYEENDEVSDTCRFDVVCSRCASQCDEAPSSIDLNGATVPVCEVVPTGVNTSAESGMTVEALDLLNGYYRTSNRSRNVMECYRLEACVGGSNADHYCAQGYTGPYCATCEARYGSGFQYSCHGCQGYDKMATVGGAISVLALIFIAVTLMVSYLVCVVEIPVSVGNG-SWKKRLSDFRDSVISAIPLTAIKIVVAAWQIITQFSSVVRVQYPPAYEKFMSALNVVNMNLGDILSLSCVLETNFYVQLVLATLGPIVVLGVLAVTYQVAKARNGHSIPAMQKAKEKHVSVALFLLFVVYSSVSYTIFQTFNCDTLDSGVVYLRADYSLECFTSTHSVYTTYAGFMVLVYPVGIPIGFSWLLLKTRHGINNVNATPRPGVQPHPESLEAVDAIKDLWAPYKPNRYFYEVIECGRRVVLTGLAAFIYPGSTAQVAIEALFAVIFYAISEILSPFAYPLDAWLYRSGSWVTYLSMYLALLLKADAAGVESYSQSVLAGLLIAAHCGMICVLVAHALL 2134
            V +YG +F  N    GG IA  S+G    +            CTF  N AVDGGA+Y +   G ++V NC+F  N A                      +  G + H+G L ++ +++F SN AGQDG AV S+G+ +   +VAF +N+  C  G+  Y++  E  D+CRF++ C+RC++ CD  PSS+ +  +T+PVC     G   S+ SG TV  LDL  GYYRTS  S+ V+ECY   AC GG++  +YCA GY GPYC+ C   Y  G  Y CH C G    + VG A            ++ + LV VV+   S+ +  + K RLS F   V++A PLT +KIVV AWQIITQF ++    YP  Y+ F++AL  VN+++G ILS SCV+ T+F+ +L++AT+GP+VVL +LA+T+ V + RN  S  A++  K KH+S ALF++F +YSSVS+T+FQTF CDTLD GV YLRADYSL C T  +  +  YA  MV VYP+GIP  F+WLL   R  +   +      +QP          + DLW  YKP+RY+YE+IE  RR+VLTG+A F+ PGS+AQ+A+  L AV+F  ISE LSPF   +D  LYR G+ V   S+Y+ALLLK + +   S + S    +LI A+  M   LV  + L
Sbjct:  376 VTLYGVLFVSNTADIGGAIALTSTGEEPTQ-------FEACTCTFDSNSAVDGGALYMSTNGGMEVVRNCNFYGNRAGESIERKASRTDDVQAALQRVEISGGTIFHTGHLGMI-ETVFASNEAGQDGTAVFSMGVVQKALNVAFASNTLNCPPGENAYDKEAE-DDSCRFELACARCSADCDAIPSSVTMADSTIPVCVESMEGTKASS-SGTTVATLDLQEGYYRTSAESQVVVECYLTSACAGGTDPKNYCADGYEGPYCSVCADGYAPGTAYQCHECSGTSMGSAVGVAXXXXXXXXXXXAVVAADLVRVVDGDDSIKDARTLKGRLSRFHAFVVTAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQDFLNALTPVNLDIGFILSYSCVVITDFFDRLLIATIGPVVVLALLALTFVVGRKRNIDSEAAVRAVKNKHLSAALFVMFFIYSSVSFTVFQTFVCDTLDDGVSYLRADYSLTCDTPRYGAFRGYAAVMVCVYPIGIPATFAWLLGSNRQDLQKADRDRLANLQP----------LGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQMAVVLLLAVVFLFISESLSPFTKKIDMALYRWGNGVVLASIYVALLLKVNVSEEGSETLSAFVVVLILANVCMAITLVVQSFL 1025          
BLAST of mRNA_H-elongata_contig1536.3534.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI)

HSP 1 Score: 487 bits (1254), Expect = 9.890e-146
Identity = 278/624 (44.55%), Postives = 370/624 (59.29%), Query Frame = 2
Query:  293 DYSGPANVTGCTFAGNVAV-DGGAMYSAAGYDMVVNCSFSENFAVVQXGALLHSGVLAVLTQSIFESNRAGQDGLAVMSLGLAENISDVAFRNNSFFCGSGKYGYE---ENDEV--SDTCRFDVVCSRCASQCD-EAPSSIDLNGA-TVPVCEVVPTGVNTSAESGMTVEALDLLNGYYRTSNRSRNVMECYRLEACVGGSNADHYCAQGYTGPYCATCEARYGSGFQYSCHGCQGYDKMATVGGAISVLALIFIAVTLMVSYLVCVVEI--PVSVGNGSWKKRLSDFRDSVISAIPLTAIKIVVAAWQIITQFSSVVRVQYPPAYEKFMSALNVVNMNLGDILSLSCVLETNFYVQLVLATLGPIVVLGVLAVTYQVAKARNGHSIPAMQKAKEKHVSVALFLLFVVYSSVSYTIFQTFNCDTLDSGVVYLRADYSLECFTSTHSVYTTYAGFMVLVYPVGIPIGFSWLLLKTRHGINNVNATPRPGVQPHPESLEAVDAIKDLWAPYKPNRYFYEVIECGRRVVLTGLAAFIYPGSTAQVAIEALFAVIFYAISEILSPFAYPLDAWLYRSGSWVTYLSMYLALLLKADAAGVESYSQSVLAGLLIAAHCGMICVLVAHALL 2134
            D S P     C F  N A+ DGGA+YS A +DM+    F +N     X                                            +N F+C  G++G E   + D    +D CRF  VCSRCAS+CD E  S+ +L  A T+P CE  P G  T+   G T+  L++L G+YR+S  S ++ EC+  +AC GGS    YCA+GY GPYCA C A Y  G+  +C  C G  K + +  A ++ AL   AV  +VS LV VVE+  P   G+  W++  S ++  V   +PLTA+KIVV  WQI+TQ+S V  V+YP AY+ F+S ++VVN++LG ILS +CV +TNFY +L++AT+GP++VLG+L  TY VA+ RN H   AM+  + +H+SV LF++FV+Y++VSYTIF+TF CDTLD G  YLRADYSL C T  H+ Y  YAG  VLVYPVGIP  F W L K RH +           Q   ES   +    DLW PYKP+ Y+YEV+EC RR+ LTG A FIYP S+AQVAI  L A +F  +SEILSPFA P++ WLYR+G +V + SMYLALLL+ D +     SQ V +G+++ AH  M  V+VA  LL
Sbjct:  421 DPSTPVKFLDCLFESNDALEDGGALYSVASFDMIRGSKFFQNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDNDFYCEEGEFGTETLIDKDLFGGADQCRFGRVCSRCASECDSELESAAELVDAETLPTCEEAPEGSRTTRR-GATLATLEILPGFYRSSETSTDIRECFHKQACEGGSAVGTYCAEGYIGPYCAVCSAGYSPGYSRTCKSCMGDSKKSALVFAAAIGALALAAVVALVSRLVSVVEVGPPQQQGSKGWRRTCSAWQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGVEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYLVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCVFGWWLFKNRHELK----------QEDRESQAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVIAHVAMFLVVVAQGLL 1033          
BLAST of mRNA_H-elongata_contig1536.3534.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE)

HSP 1 Score: 466 bits (1198), Expect = 3.400e-138
Identity = 265/619 (42.81%), Postives = 361/619 (58.32%), Query Frame = 2
Query:  323 CTFAGNVAV-DGGAMYSAAGYDMVVNCSFSENFAVVQXGALLHSGVLAVLTQSIFESNRAGQDGLAVMSLGLAENISDVAFRNNSFFCGSGKYGYE---ENDEV--SDTCRFDVVCSRCASQC-DEAPSSIDLNGA-TVPVCEVVPTGVNTSAESGMTVEALDLLNGYYRTSNRSRNVMECYRLEACVGGSNADHYCAQGYTGPYCATCEARYGSGFQYSCHGCQGYDKMATVGGAISVLALIFIAVTLMVSYLVCVVEI-------PVSVGNGSWKKRLSDFRDSVISAIPLTAIKIVVAAWQIITQFSSVVRVQYPPAYEKFMSALNVVNMNLGDILSLSCVLETNFYVQLVLATLGPIVVLGVLAVTYQVAKARNGHSIPAMQKAKEKHVSVALFLLFVVYSSVSYTIFQTFNCDTLDSGVVYLRADYSLECFTSTHSVYTTYAGFMVLVYPVGIPIGFSWLLLKTRHGINNVNATPRPGVQPHPESLEAVDAIKDLWAPYKPNRYFYEVIECGRRVVLTGLAAFIYPGSTAQVAIEALFAVIFYAISEILSPFAYPLDAWLYRSGSWVTYLSMYLALLLKADAAGVESYSQSVLAGLLIAAHCGMICVLVAHALL 2134
            C F  N A  DGGA+YS A +D++   +FS       X                                             N F+C  G++G E   + D    +D CRF  VCSRCAS+C  E   + +L  A T+P CE  P G  T+   G T+  L++L G+YR+S  S ++ EC+  +AC GGS    YC++GY GPYCA C A Y  G+  +C  C G  K + +  A ++  L   AV ++VS LV VVE+           G+  W++  S  +  V   +PLTA+KIVV  WQI+TQ+S V  ++YP AY+ F+S ++VVN++LG ILS +CV +TNFY +L++AT+GP++VLG+L  TY VA+ RN H   AM+  + +H+SV LF++FV+Y++VSYTIF+TF CDTLD G  YLRADYSL C T  H+ Y  YAG  VLVYPVGIP  F W L K RH +   +   +  ++P            DLW PYKP+ Y+YEV+EC RR+ LTG A FIYP S+AQVAI  L A +F  +SEILSPFA P++ WLYR+G +V + SMYLALLL+ D +     SQ V +G+++ AH  M  V+V   LL
Sbjct:  407 CLFESNGASEDGGALYSVASFDVIRGSNFSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDFYCEEGEFGTETLIDKDLFGGADQCRFRRVCSRCASECGSELERTAELVDADTLPTCETAPEGSRTTRR-GATLATLEVLPGFYRSSETSTDIRECFHKKACDGGSAIGTYCSEGYIGPYCAVCAAGYSPGYSRTCKSCMGNSKKSALVFAAAIGLLALAAVMVLVSRLVSVVEVGPRQQXXXXXXGSKGWRRTCSALQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGIEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYVVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCIFGWWLFKNRHELKQEDREGQAELRP----------AADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVMAHVAMFLVVVVQGLL 1014          
BLAST of mRNA_H-elongata_contig1536.3534.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI)

HSP 1 Score: 454 bits (1167), Expect = 1.420e-134
Identity = 263/614 (42.83%), Postives = 350/614 (57.00%), Query Frame = 2
Query:  305 PANVTGCTFAGNVAV-DGGAMYSAAGYDMVVNCSFSENFAVVQXGALLHSGVLAVLTQSIFESNRAGQDGLAVMSLGLAENISDVAFRNNSFFCGSGKYGYEENDEVSDTCRFDVVCSRCASQC-DEAPSSIDL-NGATVPVCEVVPTGVNTSAESGMTVEALDLLNGYYRTSNRSRNVMECYRLEACVGGSNADHYCAQGYTGPYCATCEARYGSGFQYSCHGCQGYDKMATVGGAISVLALIFIAVTLMVSYLVCVVEI-PVSVGNGSWKKRLSDFRDSVISAIPLTAIKIVVAAWQIITQFSSVVRVQYPPAYEKFMSALNVVNMNLGDILSLSCVLETNFYVQLVLATLGPIVVLGVLAVTYQVAKARNGHSIPAMQKAKEKHVSVALFLLFVVYSSVSYTIFQTFNCDTLDSGVVYLRADYSLECFTSTHSVYTTYAGFMVLVYPVGIPIGFSWLLLKTRHGINNVNATPRPGVQPHPESLEAVDAIKDLWAPYKPNRYFYEVIECGRRVVLTGLAAFIYPGSTAQVAIEALFAVIFYAISEILSPFAYPLDAWLYRSGSWVTYLSMYLALLLKADAAGVESYSQSVLAGLLIAAHCGMICVLVAHALL 2134
            P     C F  N A  DGGA+YS AG+DMV +           X                                              SF+C  G +  E   E  D CRF +VCSRCAS+C  E    + + +   +P CE VP G  T++  G T+  L++L GYYR+S  S ++ EC+  +AC GG     YCA GYTGPYCA C A +  G+ +SC  C G  +        +V  L+ +AV  M + LV VVE  P S     W+++ S ++  +   +PLTAIKIVV  WQI+TQ+S V  V+YP AY+ F+S ++VVN++LG ILSL+CV +T+FY +L+L T+ P VVLG+L  TY            AM   K +H+SVALF++FV+Y++VSYTIF+TF CD LD G  YLR+DYSL C T TH+ Y  YAG M+LVYPVGIP  F W L K RH +       R  ++P            DLW PYKP+ Y+YEV+EC RR+ LTG A FIYP S+AQVAI  L A++F  +SE LSPFA P++ WLYR+G +V + SMYLALLL+ D +   + SQ V +G+L+ AH  M+ V+V   LL
Sbjct:  436 PTKFLSCVFEENHASEDGGAIYSVAGFDMVKDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFYCEEGTFSTEVEIEGEDVCRFGLVCSRCASECASELEDEVTVADPDLLPACEAVPEGAQTTSRGG-TLATLEILPGYYRSSATSTDIRECFYEDACEGGKVVGEYCAAGYTGPYCAVCTAGFSPGYFHSCKSCMGDSRRRAFYVVSAVGVLVLLAVVFMAAKLVSVVETTPSSKAPSRWQQKRSVWQARMKKILPLTAIKIVVVVWQIVTQYSDVAGVEYPGAYKDFLSVVDVVNLDLGFILSLACVCDTDFYDRLLLTTICPAVVLGLLGCTYL-----------AMGVVKHRHLSVALFIMFVIYATVSYTIFETFVCDPLDDGNSYLRSDYSLTCDTETHTAYRVYAGLMILVYPVGIPCVFGWWLFKHRHELKQEGRERRAVLKP----------AADLWEPYKPSTYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAIVFMVVSEFLSPFARPVEMWLYRTGHYVVFASMYLALLLRVDVSDERNQSQEVFSGVLVIAHAAMLLVVVLQGLL 1027          
BLAST of mRNA_H-elongata_contig1536.3534.1 vs. uniprot
Match: D7FPF7_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF7_ECTSI)

HSP 1 Score: 394 bits (1012), Expect = 1.320e-124
Identity = 214/395 (54.18%), Postives = 280/395 (70.89%), Query Frame = 2
Query:  998 GGAISVLALIFIAVTLMVSYLVCVVEIPVSVGNGSWKKRLSDFRDSVISAIPLTAIKIVVAAWQIITQFSSVVRVQYPPAYEKFMSALNVVNMNLGDILSLSCVLETNFYVQLVLATLGPIVVLGVLAVTYQVAKARNGHSIPAMQKAKEKHVSVALFLLFVVYSSVSYTIFQTFNCDTLDSGVVYLRADYSLECFTSTHSVYTTYAGFMVLVYPVGIPIGFSWLLLKTRHGINNVNATPRPGVQPHPESLEAVDAIKDLWAPYKPNRYFYEVIECGRRVVLTGLAAFIYPGSTAQVAIEALFAVIFYAISEILSPFAYPLDAWLYRSGSWVTYLSMYLALLLKADAAGVESYSQSVLAGLLIAAHCGMICVLVAHALLPALKRLTQIRVVMVPI 2182
            G AI+ L ++   V L+++ LV VV+   +    +  K L+  R+ + + IPLT+IKIV+ AWQI+TQFSSVV V YP  YEKF+S LN+VN N G ILS SCV++TNFY +L+ AT+GP+VVLG LA+TY V+++RN HS   +Q AK KH+S+ALF++FVVYSSVS+ IFQTF C+TLD GV YLRADYSL C T TH+    YAG M+ VYP GIP  F+  L+  RH +  V+A    G     +SL  +  ++DLWAPYKP RY++EV+ECGRR+ LTGLA FIYPGS AQVA+E +FA  F  IS++LSPFA PLDAWLYRSG+WV ++SM+L LLLK DA+  +S SQ + A LLI+AH GM+  +   A+L     L  +R   +PI
Sbjct:    9 GIAIAFLLVVSGGVALVIANLVRVVDDDNTGTVSACGKTLNSLRNRIANGIPLTSIKIVLVAWQIVTQFSSVVNVVYPDVYEKFLSILNLVNFNFGFILSASCVVDTNFYGRLLFATIGPLVVLGALALTYAVSRSRNRHSPAGIQTAKHKHLSIALFIMFVVYSSVSFNIFQTFVCETLDDGVEYLRADYSLVCSTDTHTAMKVYAGLMIFVYPFGIPAFFTLWLVSNRHDLVKVDANG--GSTATAKSLGNLQPMRDLWAPYKPRRYYFEVVECGRRIALTGLAVFIYPGSAAQVALEVVFAAFFIGISDVLSPFADPLDAWLYRSGAWVIFISMFLTLLLKVDASDEDSQSQELFAKLLISAHVGMVLAIAVQAVLSVKGSLVAMRDQPIPI 401          
BLAST of mRNA_H-elongata_contig1536.3534.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 400 bits (1028), Expect = 7.780e-120
Identity = 261/712 (36.66%), Postives = 389/712 (54.63%), Query Frame = 2
Query:   26 STIHVDGRSSFSNNEANDDGGAIYASGSW-VFIENG-THFISNIAHTGSGGGVYTSRAVVA--IYGAIFTQNRGVWGGGIAHFSSGSTWNKNVDYSGPANVTGCTFAGNVAV-DGGAMYSAAGYDMVVNCSFSENFAVVQXGALLHSGVLAVLTQSIFESNRAGQDGLAVMSLGLAENISDVAFRNNSFFCGSGKY-GYEENDEVSDTCRFDVVCSRCASQCDEAPSSIDLNGATVPVC-EVVPTGVNTSAESGM-TVEALDLLNGYYRTSNRSRNVMECYRLEACVGG-SNADHYCAQGYTGPYCATCEARYGSGFQYSCHGCQGYDKMATVGGAISVLALIFIAVTLMVSYLVCVVEIPVSVGNGSWKKRLSDFRDSVISAIPLTAIKIVVAAWQIITQFSSVVRVQYPPAYEKFMSALNVVNMNLGDILSLSCVLETNFYVQLVLATLGPIVVLGVLAVTYQVAKARNGHSIPAMQKAKEKHVSVALFLLFVVYSSVSYTIFQTFNCDTLDSGVVYLRADYSLECFTSTHSVYTTYAGFMVLVYPVGIPIGFSWLLLKTRHGINNVNATPRPGVQPHPESLEAVDAIKDLWAPYKPNRYFYEVIECGRRVVLTGLAAFIYPGSTAQVAIEALFAVIFYAISEILSPFAYPLDAWLYRSGSWVTYLSMYLALLLKADAAGVESYSQSVLAGLLIAAHCGMICVLVAHALL 2134
            ST+ +DG ++F NN + ++GGA+   G   + +  G T F+ N A+  +GG VY S   +       IF  N    GG ++   SG+      D   P   + C F  N A   GGA+ SA+G D+  +  F  N AV   GAL  +G  +++  S  E+     +G AV ++G+   IS+  F  N F C    +  Y   D +      D  CS C + CD       +    VP+C +V+P   ++ ++ G+ T+E L +  GY+R +N S  V+ CY ++ACVGG + A  YC +GY GPYCA C   Y +   ++C  C        +  A++V+ L    V  +VSY+   V+           KR           +PL  +KI+V AWQI+TQF+S   V YP  Y++F++ L+V N ++  +LS  CV++ +F+ +L+L+T+GPI+ L  LA TY+     N  +   +Q   ++HVS+ L L+F+VYS VS  +FQTF CD L+ G  YLRADY +EC +S H  +  YAGFM+L+YPVGIP  +  LLL+ R    +V      G +  P     V +I +LW PY+P+ Y+YEVIECGRR++LTGL  FIYP + AQ+AI  +  V+F  +SE L P+A   D W+ R    V ++S+Y+ALLLK D +  +  SQ V   +L+AAH  MI  +V   +L
Sbjct:  317 STLSIDGPTAFVNNTSGENGGALALLGGLSISVNTGETSFVDNSANL-AGGAVYVSDTAIGPTFSDVIFDSNSAQVGGAVSSLGSGNVKGGENDQLLPTTFSRCRFTFNRATATGGAVDSASGQDLFEDTVFRGNQAVT-GGALRLAGRASLVNCSFVENLSDDGEGAAVSNVGVISEISNTTFSGNVFNCAPDTFLNYTSGDAL------DEACSGCQTTCDGC-----VQPPVVPLCSDVIP---HSRSDGGLVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCPNRAGGILLATALAVIGLF--TVVAVVSYVAWRVDPNTGCAMAGHLKRY----------LPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDR----DVLEKDPDGREDPPR----VASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETIL 992          
BLAST of mRNA_H-elongata_contig1536.3534.1 vs. uniprot
Match: A0A6H5JWT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT9_9PHAE)

HSP 1 Score: 402 bits (1032), Expect = 3.290e-119
Identity = 261/712 (36.66%), Postives = 382/712 (53.65%), Query Frame = 2
Query:   44 GRSSFSNNEAN-DDGGAIYASGSWVFIENGTHFISNIAHT-----GSGGGVYTSRAVVAIY--GAIFTQNRGVWGGGIAHFSSGSTWNKNVDYSGPANVTGCTFAGNVAVD-GGAMYSAAGYDMVVNCSFSENFAVVQXGALLHSGVLAVLTQSIFESNRAGQDGLAVMSLGLAENISDVAFRNNSFFCGSGKYGYEENDEVSDTCRFDVVCSRCASQCDEAPSSIDLNGATVPVCEVVPTGVNTSAESGMTVEALDLLNGYYRTSNRSRNVMECYRLEACVGG-SNADHYCAQGYTGPYCATCEARYGSGFQYSCHGCQGYDKMATVGGAISVLALIFIAVTLMVSYLVCVVEIPVSVGNGSW-KKRLSDFRDSVISAIPLTAIKIVVAAWQIITQFSSVVRVQYPPAYEKFMSALNVVNMNLGDILSLSCVLETN--FYVQLVLATLGPIVVLGVLAVTYQVAKARN----GHSIPAMQKAKEKHVSVALFLLFVVYSSVSYTIFQTFNCDTLDSGVVYLRADYSLECFTSTHSVYTTYAGFMVLVYPVGIPIGFSWLLLKTRHGINNVNATPRPGVQPHPESLEAVDAIKDLWAPYKPNRYFYEVIECGRRVVLTGLAAFIYPGSTAQVAIEALFAVIFYAISEILSPFAYPLDAWLYRSGSWVTYLSMYLALLLKADAAGVESYSQSVLAGLLIAAHCGMICVLVAHA 2128
            GR++F NN A   DGGA+   GS     +  +   ++  T     G+GGGV++S      Y  G  F  N    GG +A + +G   N +     PA+  GC F  N A + GG + SA G +  V+  F +N+A V  G  L  G    +    F +N A   GLA+ ++G   NISD  F  N+FFC +G++   +  E  D+ R+D VC  C  + +    S+    A  P C V       S E+G+++E L +  GY+R SN S  ++ CY  EAC+GG +  D+ C  GY GPYCA CE+ Y S   ++C  C    +   V     V A I +          C   I   V   S   +RLS       + +PL + KI++  WQI+TQF+S   + +P  Y+ F++AL+VVN +LG +++  C  + N  F+ +L+++TLGP++V+G LA TY VA+ RN    G S   ++  + KH+S  L + F+VYSSVS T+FQ F CD LD G  YLRADY + C ++ H     YA FM+ +YPVGIP+ +++LL   R  + +  A              +  +  DLW PY+P R++YEVIECGRRV+LTG+  FIYP + AQVA+  L A  F  + E+L+P+    D WL R G  + +LSM+  LLLK D +   + SQ V AG+++A HC M   ++  A
Sbjct:  448 GRTTFWNNTAAAGDGGALGLYGSMALSSSVVNISGDVTFTNNSAFGNGGGVFSSANTAGQYFEGVTFQYNSAAVGGAVATYGTG---NGDEVTPVPASFVGCRFMSNAATETGGGVESAFGQENFVSSHFQDNYADV--GGALQLGGKTNVDGCAFVANSASSRGLAIAAVGFV-NISDTLFEGNTFFCQAGEFVENKEQEEGDSGRYDTVCFDCPERSECYSCSVQ-EAAGRPTCSVALDNT-VSEEAGVSLETLSMSRGYWRASNSSLIILACYNPEACLGGQTGVDNSCDNGYQGPYCAVCESGYASSLAHTCTQCSSSRRNGFV-----VAAAIAVVXXXXXXXXXCAHLISGEVSEQSCLHRRLS-------AMLPLQSFKIIIVVWQILTQFASAANISFPDVYQDFINALDVVNFDLGSLVASGCWADINVDFHDRLLVSTLGPLLVVGGLASTYAVAQRRNSSASGGSQAGVEAIRHKHLSAFLLVTFLVYSSVSATVFQMFACDKLDDGHTYLRADYRILCTSAKHEALQVYAAFMIALYPVGIPLLYAYLLHHRRDVLMDPTA-----------DKASAQSTADLWEPYRPERFYYEVIECGRRVLLTGVVVFIYPNTAAQVAVTILIAFFFLMVYEMLAPYRSDSDMWLSRGGHVIVFLSMFDVLLLKVDVSDERTESQRVFAGVIVAGHCLMFLAVIVEA 1128          
BLAST of mRNA_H-elongata_contig1536.3534.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE)

HSP 1 Score: 404 bits (1039), Expect = 2.780e-117
Identity = 268/682 (39.30%), Postives = 372/682 (54.55%), Query Frame = 2
Query:  107 SWVFIENGTHFISNIAHTGSGGGVYTSRAVVA--IYGAIFTQNRGVWGGGIAHFSSGSTWNKNVDYSGPANVTGCTFAGNVA-VDGGAMYSAAGYDMVVNCSFSENFAVVQXGALLHSGVLAVLTQSIFESNRAGQDGLAVMSLGLAENISDVAFRNNSFFCGSGKYGYEENDEVSDTCRFDVVCSRCASQCDEAPSSIDLNGATVPVCEVVPTGVNTSAESGMTVEALDLLNGYYRTSNRSRNVMECYRLEACVGG-SNADHYCAQGYTGPYCATCEARYGSGFQYSCHGCQGYDKMATVGGAISVLALIFIAVTLMVSYLVCVVEIPVSVGNGSWKKRLSDFRDSVISAIPLTAIKIVVAAWQIITQFSSVVRVQYPPAYEKFMSALNVVNMNLGDILSLSCVLETNFYVQLVLATLGPIVVLGVLAVTYQVAKARNGHSIPAMQKAKEKHVSVALFLLFVVYSSVSYTIFQTFNCDTLDSGVVYLRADYSLECFTSTHSVYTTYAGFMVLVYPVGIPIGFSWLLLKTRHGINNVNATPR---PGVQPHPESLEAVDAIKDLWAPYKPNRYFYEVIECGRRVVLTGLAAFIYPGSTAQVAIEALFAVIFYAISEILSPFAYPLDAWLYRSGSWVTYLSMYLALLLKADAAGVESYSQSVLAGLLIAAHCGMICVLVAHAL 2131
            S VF  + + F SN A  G+GG V  S  V+        FT NR   GG +   SSG   N   D   P     C F  N A V GGA+ +AAGYD  +N  F  N A V  G  L  G  A+LT   F  N A  +G AV +LG+ +      F  N   C +G Y     D V D  R+  VC  C     +   S++ NG  VP+C VV      S     T+E L+L +GY+R +N S NV+ CY  +ACVGG +N   +C +GY GPYC+ C   Y     ++C  C     +   GG       I I V + V  L   + + + + +G  +         V+  +PL +IKIVV  WQI+TQFSSV  V YP  Y++F+  +N++N ++  I S  C++E +F+ +L++AT+GP+V L +LA+TY VAK R+  S  A+QK + KH+S+ L + F+VYSSVS T+FQ+F C+ LD    YLRADY +EC +S H  +  +AG M+LVYPVGIP+ + +LL K R  + + +A  R   P VQP          I DLW PYKP R++YEVIEC RR+ LTG+  FIYP + AQVA+  + A  F   S +L+P+    DA +   G  + + SMY ALL K D +   + SQ V AG+L+AAH  M+  +V   +
Sbjct: 1102 STVFNISSSIFESNTA--GAGGAVMLSGVVIGPEFIQINFTANRAPRGGAVYSVSSGIETNGGGDPLFPVGYKDCLFRDNEASVTGGAIETAAGYDFAINSVFEANAAGV--GGALRLGGSAILTNCTFIDNTAEDEGPAVSNLGVLDLEGTSRFSGNVLSCENGMY----LDSV-DGDRYQTVCDGCPVNNSDWIVSVE-NGDRVPIC-VVQLDHTRSEGGDTTIETLELSSGYWRATNDSANVLACYNEDACVGGMTNDPAFCQRGYEGPYCSVCSEGYSMSLAFTCTEC-----VDDHGG-------IAIMVVVGVFVLGAAIALCMHLVSGEMEGARRGVIHRVVKRLPLQSIKIVVVVWQILTQFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQP----------ISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVETI 1750          
BLAST of mRNA_H-elongata_contig1536.3534.1 vs. uniprot
Match: D7G8S0_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8S0_ECTSI)

HSP 1 Score: 369 bits (946), Expect = 3.160e-116
Identity = 190/345 (55.07%), Postives = 250/345 (72.46%), Query Frame = 2
Query: 1100 SWKKRLSDFRDSVISAIPLTAIKIVVAAWQIITQFSSVVRVQYPPAYEKFMSALNVVNMNLGDILSLSCVLETNFYVQLVLATLGPIVVLGVLAVTYQVAKARNGHSIPAMQKAKEKHVSVALFLLFVVYSSVSYTIFQTFNCDTLDSGVVYLRADYSLECFTSTHSVYTTYAGFMVLVYPVGIPIGFSWLLLKTRHGINNVNATPRPGVQPHPESLEAVDAIKDLWAPYKPNRYFYEVIECGRRVVLTGLAAFIYPGSTAQVAIEALFAVIFYAISEILSPFAYPLDAWLYRSGSWVTYLSMYLALLLKADAAGVESYSQSVLAGLLIAAHCGMICVLVAHALL 2134
            +W KRL+  R+ + + +PLT+IKIV+ AWQI+TQFSSV+ V YP  YE+F+S LNVVN NLG ILS+SC++++NFY     AT+ P+VV G  AVTY V+K+RN HS   MQ AK KH+S+ LF++FVVYSSV + IFQTF C+ LD+G+ YLRADYSL C+T  H     YAG M+ VYPVGIP  ++W LL  RH +  V A P   ++  PE L+ +  ++DLWAPYKP+RY++EV+ECG R+ LTGLAAF+ P S AQ AIE + A IF A+S++LSPF  P DAWLYR G W+T  SMYLAL+   D +  ++ SQ+V A +LIAAH GM+ V+V  A+L
Sbjct:    8 TWGKRLTSCRERITNVVPLTSIKIVLVAWQIVTQFSSVLNVVYPGVYERFLSVLNVVNFNLGFILSVSCIVDSNFYGCRFFATICPLVVFGAQAVTYTVSKSRNRHSPAGMQAAKSKHLSITLFIMFVVYSSVPFNIFQTFVCERLDTGMDYLRADYSLTCYTGVHKAMMVYAGLMIFVYPVGIPAFYAWWLLFIRHYLVKVGA-PNNFLERVPE-LDHLQPMRDLWAPYKPHRYYFEVVECGHRIALTGLAAFLLPNSAAQAAIEVVLAAIFVAVSDVLSPFVDPFDAWLYRIGGWITCFSMYLALV---DVSDEDNQSQAVFAKVLIAAHAGMVAVIVVQAVL 347          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1536.3534.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWI3_9PHAE2.600e-21548.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSF5_9PHAE1.230e-15042.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTT9_ECTSI9.890e-14644.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L324_9PHAE3.400e-13842.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTU5_ECTSI1.420e-13442.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FPF7_ECTSI1.320e-12454.18Probable extracellular nuclease (ISS) n=1 Tax=Ecto... [more]
D7FHH1_ECTSI7.780e-12036.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWT9_9PHAE3.290e-11936.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JY65_9PHAE2.780e-11739.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8S0_ECTSI3.160e-11655.07Probable extracellular nuclease (ISS) n=1 Tax=Ecto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1536contigH-elongata_contig1536:7147..11961 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score479.2
Seed ortholog evalue3.1e-132
Seed eggNOG ortholog2880.D7FTT9
EggNOG OGs2BFIX@1,2S176@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons7
Model size2847
Cds size1938
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929907.7219334-UTR-H-elongata_contig1536:7146..72321622929907.7219334-UTR-H-elongata_contig1536:7146..7232Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1536 7147..7232 +
1691679203.8028045-UTR-H-elongata_contig1536:7146..72321691679203.8028045-UTR-H-elongata_contig1536:7146..7232Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1536 7147..7232 +
1622929907.7523117-UTR-H-elongata_contig1536:7668..78301622929907.7523117-UTR-H-elongata_contig1536:7668..7830Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1536 7669..7830 +
1691679203.8121593-UTR-H-elongata_contig1536:7668..78301691679203.8121593-UTR-H-elongata_contig1536:7668..7830Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1536 7669..7830 +
1622929907.767117-UTR-H-elongata_contig1536:8132..82451622929907.767117-UTR-H-elongata_contig1536:8132..8245Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1536 8133..8245 +
1691679203.8200464-UTR-H-elongata_contig1536:8132..82451691679203.8200464-UTR-H-elongata_contig1536:8132..8245Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1536 8133..8245 +
1622929907.8632903-UTR-H-elongata_contig1536:11413..119611622929907.8632903-UTR-H-elongata_contig1536:11413..11961Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1536 11414..11961 +
1691679203.8664906-UTR-H-elongata_contig1536:11413..119611691679203.8664906-UTR-H-elongata_contig1536:11413..11961Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1536 11414..11961 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929907.7831583-CDS-H-elongata_contig1536:8245..83061622929907.7831583-CDS-H-elongata_contig1536:8245..8306Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1536 8246..8306 +
1691679203.8279397-CDS-H-elongata_contig1536:8245..83061691679203.8279397-CDS-H-elongata_contig1536:8245..8306Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1536 8246..8306 +
1622929907.8027294-CDS-H-elongata_contig1536:8498..86951622929907.8027294-CDS-H-elongata_contig1536:8498..8695Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1536 8499..8695 +
1691679203.83551-CDS-H-elongata_contig1536:8498..86951691679203.83551-CDS-H-elongata_contig1536:8498..8695Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1536 8499..8695 +
1622929907.8181496-CDS-H-elongata_contig1536:9180..94721622929907.8181496-CDS-H-elongata_contig1536:9180..9472Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1536 9181..9472 +
1691679203.8431342-CDS-H-elongata_contig1536:9180..94721691679203.8431342-CDS-H-elongata_contig1536:9180..9472Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1536 9181..9472 +
1622929907.8350868-CDS-H-elongata_contig1536:9847..101371622929907.8350868-CDS-H-elongata_contig1536:9847..10137Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1536 9848..10137 +
1691679203.8513181-CDS-H-elongata_contig1536:9847..101371691679203.8513181-CDS-H-elongata_contig1536:9847..10137Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1536 9848..10137 +
1622929907.8478744-CDS-H-elongata_contig1536:10315..114131622929907.8478744-CDS-H-elongata_contig1536:10315..11413Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1536 10316..11413 +
1691679203.8589811-CDS-H-elongata_contig1536:10315..114131691679203.8589811-CDS-H-elongata_contig1536:10315..11413Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1536 10316..11413 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1536.3534.1prot_H-elongata_contig1536.3534.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig1536 8246..11413 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig1536.3534.1

>prot_H-elongata_contig1536.3534.1 ID=prot_H-elongata_contig1536.3534.1|Name=mRNA_H-elongata_contig1536.3534.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=646bp
MYSAAGYDMVVNCSFSENFAVVQGGALLHSGVLAVLTQSIFESNRAGQDG
LAVMSLGLAENISDVAFRNNSFFCGSGKYGYEENDEVSDTCRFDVVCSRC
ASQCDEAPSSIDLNGATVPVCEVVPTGVNTSAESGMTVEALDLLNGYYRT
SNRSRNVMECYRLEACVGGSNADHYCAQGYTGPYCATCEARYGSGFQYSC
HGCQGYDKMATVGGAISVLALIFIAVTLMVSYLVCVVEIPVSVGNGSWKK
RLSDFRDSVISAIPLTAIKIVVAAWQIITQFSSVVRVQYPPAYEKFMSAL
NVVNMNLGDILSLSCVLETNFYVQLVLATLGPIVVLGVLAVTYQVAKARN
GHSIPAMQKAKEKHVSVALFLLFVVYSSVSYTIFQTFNCDTLDSGVVYLR
ADYSLECFTSTHSVYTTYAGFMVLVYPVGIPIGFSWLLLKTRHGINNVNA
TPRPGVQPHPESLEAVDAIKDLWAPYKPNRYFYEVIECGRRVVLTGLAAF
IYPGSTAQVAIEALFAVIFYAISEILSPFAYPLDAWLYRSGSWVTYLSMY
LALLLKADAAGVESYSQSVLAGLLIAAHCGMICVLVAHALLPALKRLTQI
RVVMVPIPAQNPSQVFSPELLNEGDLGGIEEDRLYNIPQRYRSSI*
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mRNA from alignment at H-elongata_contig1536:7147..11961+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig1536.3534.1 ID=mRNA_H-elongata_contig1536.3534.1|Name=mRNA_H-elongata_contig1536.3534.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4815bp|location=Sequence derived from alignment at H-elongata_contig1536:7147..11961+ (Himanthalia elongata Himel1 dioecious)
AGGTGCGATTGCCTTGACGAGTGCGAGCACCATACACGTCGATGGACGGT CGTCATTCTCCAACAACGAGGCAAATGATGATGGAGGTAATATACATCGT TCGTGGAGTACCAGGGTACAGCCGATACAACGAATATCCAATTTCATAGT CCCACCGAGTCGCAAGACGATAAAACAACACAAGCATTCCATCTTGATTA TATTTTTCGCTCCACTGCCGTTCTATTATTTGTTGTTGTTCTTATGTCGG TTCACTGATGTTCCACTGCCGTTTCACTGTAACTTCGTGCACTTATCGTG AAGAGTAGATATCGTATGAGTTTGCCTCTAAATTTCTTGTAATATTTGTG CCGTCATGATTTCTTCATATGTCGGTGTGCTAACAAGGCCATAGTTTTAT TTACATGAGTCCATGAAAATATCCACGTTCACTGCTCTAAACTCGATATC AAATGCACACCTTAGGGGGGAGAAATCCAGCATAGTCGGGTGAGATCTTT ATCATACGTCACTTATCATCAGGTGCCATCTACGCCAGCGGCTCTTGGGT TTTTATTGAGAATGGAACACATTTTATTTCAAATATTGCTCACACCGGCT CCGGAGGCGGCGTATATACGTCAAGGGCAGTGGTGGCTATATATGGAGCA ATATTCACGCAAAATCGTGGTGTTTGGGGTGGAGGTAAGTAACAAACAGT ACAGCTCCAGAAGAACCAGACGTTTCAAGGAATGGGATATTTATGTCCTC ACTCTGACTGCAAAGCGAGTCATAACCACGGTGACTGCGAAGCAAACACC GAGTAATCTCTTTGCAATCATAAAACTAGGTTATATTGCCAAGGTAGACA TATATTGCTTTATATTTAGAGCTCTAAGTTCGTTTGATTCATGATTTTCA AACGTTTCGAAATTGAGTGCATTACGGAGTCATACTAATCTCTCCAACGT CCAATCTAAACCACCACCGTGGGCAACCACAACCAGGTATTGCACATTTT TCTTCGGGTTCCACGTGGAACAAAAACGTCGACTACTCTGGTCCCGCCAA TGTTACGGGGTGCACGTTCGCCGGCAACGTGGCAGTAGACGGAGGGGCCA TGTATAGTGCGGCGGGTTACGACATGGTCGTCAATTGTTCTTTCTCTGAA AACTTTGCAGGTGGCTCGTGAGTTGGAGGCCTTGAGTTATCCGGTCATGG ATCAAACATTCAATATTATTGTATAACAACCACAACGCCTCCGTTCAGTG CTGGTTTGGGGCAGTATAATCGTTGTTCACTTTTATCGCGTGGGCATCTG CTTTCATCATTCTTATCTTAGGAACTGAGTCTTTCCCTTTCTCTGTTCTC AGTGGTGCAAGGTGGCGCCCTCCTTCACTCCGGCGTACTAGCGGTACTGA CCCAAAGCATCTTCGAGTCTAACAGAGCTGGACAGGACGGACTAGCAGTA ATGAGTCTCGGCCTTGCAGAAAACATCTCAGATGTTGCGTTTCGAAACAA TTCCTTCTTCTGTGGGTCGGGCAAGTACGGATATGAAGAGAACGACGAGG TGATCCCTTTGATGAGCAATTTGTAAAAGGTGCAAGTATTTTTAACATCG ATGTCACATCATTTCTCTTATTCCATTACTACCCAGCGTCGCCTATATCT GGTAGAAAGGGGAACTACCTCGCTCCATGTTTAGCGCCTCTTTTATTAAT TAACTATATCATTAGAGAGCGTATATAATTATCTTCACTCGGCTAGGCTC TCCCGGTATGTACATATATCATATAATCTTATTCAGCGACCATGGCTGAT TGGCTTATACCCAATCATATTACCCACGGCAATAAACAGGAGAGGTTGGA TTTCGTATTGACTTATACACACTCGTAAGTCGGCATAATAAGTGAACTGG GTTACATAGCAGCCTCCCGGCTGGTGGTCCTGTGACTTACATCATGTCGC GCATTTTTTAGCATTACTGCAGAAAAACTGCGATGGATAATAGACACAAG AGACCATTCTTCGGGCTAACCCATTGTTCCCCAGGTTTCCGATACCTGCC GCTTCGATGTGGTCTGCTCACGGTGCGCGAGCCAGTGTGACGAAGCTCCT AGCAGTATTGACTTGAACGGAGCCACAGTACCAGTTTGCGAGGTGGTCCC TACGGGGGTGAACACCAGTGCCGAGTCAGGAATGACCGTTGAAGCGCTTG ACCTCTTGAATGGATACTACCGAACGTCGAACCGAAGTCGAAACGTCATG GAATGCTACAGATTGGAGGCTTGTGTTGGAGGCTCAAACGCTGATCACTA CTGCGCCCAAGGTTACACAGGCCCATGTGAGGGTGTTTCAAACCTATCTG TCCGTAGGATGCTTGAAGGCTTTTTGGTGTAGACTCTGAAAATGGTGGTT TGCGTGCCAAAATACTTGTGTGGTTGAACTGCCCCAAAAAACGAGTATAG TGCCGCATTCTATTACAGAAGACAAATTTAAGTGCTAAAGTAACGAGTCG AGTTTATTCAGCAACATCGCGATATCTGTATCTTTCGTATATGAAGAATT TGAGCGTTACCTGGTAGCCTCTTCAAGTTACCTCTTGCTTGATTGAGCTG ACGATCGACCTCCACGGTTTACGGCCGTTCGTGAGGACCACACGTCTATG AACGCATCGTCCGCACCCCGTTCTCTGCGCATTAAATTGTCGTCTCAACA GATTGTGCTACTTGCGAAGCGCGATATGGCTCTGGGTTTCAGTACAGCTG TCACGGGTGCCAAGGGTACGATAAAATGGCCACCGTCGGCGGAGCCATTT CTGTGCTGGCCTTAATATTTATTGCGGTTACCTTGATGGTGTCCTATCTC GTTTGCGTTGTGGAAATCCCAGTTTCTGTGGGCAATGGAAGTTGGAAAAA GAGACTATCGGACTTCCGAGATAGTGTGATCAGTGCCATCCCCCTTACAG CTATCAAGATCGTGGTGGCTGCGTGGCAGATAATCACACAGGTAAGATTT TTTGTGCTGGACTGGAATCGCGGCGGTTATATCGAACTACCCGCGCAATG TAAGTTGGTTCAATGTTATGTAGGGGCAAGTGCAAACACATGATCATTTC ACTATGCCTTGTTTTTATTCTCATTCCATCCTTCCGTACTTCAAATGACT GATCTCTCACGAATGACAGTTCTCCAGCGTGGTGCGCGTTCAGTACCCTC CGGCGTACGAGAAGTTCATGTCAGCGCTAAATGTCGTCAATATGAATTTG GGGGACATCCTGTCGCTCTCGTGTGTCTTGGAGACGAATTTCTATGTACA GCTTGTTTTGGCGACTCTCGGTCCAATCGTGGTGCTCGGTGTGCTGGCGG TTACCTACCAAGTCGCCAAAGCACGGAACGGCCATTCGATCCCTGCGATG CAGAAGGCGAAGGAGAAGCACGTCTCCGTGGCCTTATTTCTACTATTCGT CGTCTACTCTTCCGTATCTTACACGATTTTCCAGACATTCAACTGCGACA CCTTGGATTCCGGTGTCGTGTATCTGCGCGCCGACTACAGCCTAGAGTGC TTTACCAGTACTCACTCGGTGTATACAACTTATGCAGGGTTCATGGTGCT CGTATACCCGGTCGGAATCCCAATCGGCTTTTCTTGGTTGCTGTTAAAAA CTCGACATGGTATCAACAACGTCAATGCAACCCCTAGACCTGGGGTACAA CCACATCCAGAGTCCCTCGAAGCTGTGGATGCCATCAAGGACCTCTGGGC ACCGTACAAGCCAAACCGCTACTTTTACGAGGTTATCGAGTGCGGTCGAC GGGTTGTACTTACTGGCCTCGCTGCCTTCATTTACCCTGGCAGCACGGCG CAGGTGGCAATTGAAGCATTGTTCGCGGTCATATTCTACGCCATATCCGA AATTTTGAGTCCATTTGCCTACCCCTTGGATGCGTGGTTGTACCGTTCCG GATCATGGGTAACTTATCTCAGTATGTACCTGGCGCTGCTTCTGAAGGCA GACGCAGCAGGCGTTGAGAGCTACAGCCAGAGTGTGCTTGCCGGATTGTT GATCGCCGCCCACTGTGGCATGATATGTGTACTAGTCGCTCACGCCCTCT TGCCCGCGTTGAAAAGACTAACCCAAATTCGAGTTGTCATGGTGCCCATA CCGGCTCAAAACCCGTCTCAAGTGTTTAGTCCTGAGCTGTTGAACGAAGG CGATCTTGGGGGGATCGAAGAAGATCGACTCTACAACATTCCGCAGCGCT ATAGGTCCAGCATTTGATTGGGCAAGAATATGAGTGCTTTCATCGATGGG TGTGGGAAGTGAGGGTGAATGTTGATTTATGCGTGGGTGCGTGTAGTCGT GGTGGGGTTGGTGGTGGAAAAAATGCTTGGCTAGGTGGTTGTATGTCGAG GGATGGGGAGGAGTCTTTTATTCTATGTTTTAAATCATTTTTTTGCCGAC GGAAAGAGTCTCACTGATACGGTCGTTTTAAGGGGAAGACTGCAATTTTG CCCAGTAAGAGTTGCGTAAGGCCGTAGTCTGATTGTTTCTACCGAATAAT AATGTATGGCTTCATTTTGTTAGCGTATCCATGGATTATGTTTGTGATTT TTTATTTCTTGTGTACTTCAAATCCTTGATGGATGGCAGTTGTATCTTGC GGTGTTTTTCTTGGCTTTCGGCTATGCCGTATATACCTTACATTTATATA GGTGTTATTTTATTGTTTTTTATTTATTTAAATATCACATGAGCTGATGC TAAAATTCGCCACATGGTCATGACGTCCCTTCCATACAAAAGGAAAAATC AATGATGTATGATGG
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Coding sequence (CDS) from alignment at H-elongata_contig1536:7147..11961+

>mRNA_H-elongata_contig1536.3534.1 ID=mRNA_H-elongata_contig1536.3534.1|Name=mRNA_H-elongata_contig1536.3534.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3876bp|location=Sequence derived from alignment at H-elongata_contig1536:7147..11961+ (Himanthalia elongata Himel1 dioecious)
ATGTATAGTGCGGCGGGTTACGACATGGTCGTCAATTGTTCTTTCTCTGA
AAACTTTGCAGATGTATAGTGCGGCGGGTTACGACATGGTCGTCAATTGT
TCTTTCTCTGAAAACTTTGCAGTGGTGCAAGGTGGCGCCCTCCTTCACTC
CGGCGTACTAGCGGTACTGACCCAAAGCATCTTCGAGTCTAACAGAGCTG
GACAGGACGGACTAGCAGTAATGAGTCTCGGCCTTGCAGAAAACATCTCA
GATGTTGCGTTTCGAAACAATTCCTTCTTCTGTGGGTCGGGCAAGTACGG
ATATGAAGAGAACGACGAGTGGTGCAAGGTGGCGCCCTCCTTCACTCCGG
CGTACTAGCGGTACTGACCCAAAGCATCTTCGAGTCTAACAGAGCTGGAC
AGGACGGACTAGCAGTAATGAGTCTCGGCCTTGCAGAAAACATCTCAGAT
GTTGCGTTTCGAAACAATTCCTTCTTCTGTGGGTCGGGCAAGTACGGATA
TGAAGAGAACGACGAGGTTTCCGATACCTGCCGCTTCGATGTGGTCTGCT
CACGGTGCGCGAGCCAGTGTGACGAAGCTCCTAGCAGTATTGACTTGAAC
GGAGCCACAGTACCAGTTTGCGAGGTGGTCCCTACGGGGGTGAACACCAG
TGCCGAGTCAGGAATGACCGTTGAAGCGCTTGACCTCTTGAATGGATACT
ACCGAACGTCGAACCGAAGTCGAAACGTCATGGAATGCTACAGATTGGAG
GCTTGTGTTGGAGGCTCAAACGCTGATCACTACTGCGCCCAAGGTTACAC
AGGCCCATGTTTCCGATACCTGCCGCTTCGATGTGGTCTGCTCACGGTGC
GCGAGCCAGTGTGACGAAGCTCCTAGCAGTATTGACTTGAACGGAGCCAC
AGTACCAGTTTGCGAGGTGGTCCCTACGGGGGTGAACACCAGTGCCGAGT
CAGGAATGACCGTTGAAGCGCTTGACCTCTTGAATGGATACTACCGAACG
TCGAACCGAAGTCGAAACGTCATGGAATGCTACAGATTGGAGGCTTGTGT
TGGAGGCTCAAACGCTGATCACTACTGCGCCCAAGGTTACACAGGCCCAT
ATTGTGCTACTTGCGAAGCGCGATATGGCTCTGGGTTTCAGTACAGCTGT
CACGGGTGCCAAGGGTACGATAAAATGGCCACCGTCGGCGGAGCCATTTC
TGTGCTGGCCTTAATATTTATTGCGGTTACCTTGATGGTGTCCTATCTCG
TTTGCGTTGTGGAAATCCCAGTTTCTGTGGGCAATGGAAGTTGGAAAAAG
AGACTATCGGACTTCCGAGATAGTGTGATCAGTGCCATCCCCCTTACAGC
TATCAAGATCGTGGTGGCTGCGTGGCAGATAATCACACAGATTGTGCTAC
TTGCGAAGCGCGATATGGCTCTGGGTTTCAGTACAGCTGTCACGGGTGCC
AAGGGTACGATAAAATGGCCACCGTCGGCGGAGCCATTTCTGTGCTGGCC
TTAATATTTATTGCGGTTACCTTGATGGTGTCCTATCTCGTTTGCGTTGT
GGAAATCCCAGTTTCTGTGGGCAATGGAAGTTGGAAAAAGAGACTATCGG
ACTTCCGAGATAGTGTGATCAGTGCCATCCCCCTTACAGCTATCAAGATC
GTGGTGGCTGCGTGGCAGATAATCACACAGTTCTCCAGCGTGGTGCGCGT
TCAGTACCCTCCGGCGTACGAGAAGTTCATGTCAGCGCTAAATGTCGTCA
ATATGAATTTGGGGGACATCCTGTCGCTCTCGTGTGTCTTGGAGACGAAT
TTCTATGTACAGCTTGTTTTGGCGACTCTCGGTCCAATCGTGGTGCTCGG
TGTGCTGGCGGTTACCTACCAAGTCGCCAAAGCACGGAACGGCCATTCGA
TCCCTGCGATGCAGAAGGCGAAGGAGAAGCACGTCTCCGTGGCCTTATTT
CTACTATTCGTCGTCTACTCTTCCGTATCTTACACGATTTTCCAGACATT
CAACTGCGACACCTTGGATTCCGGTGTCGTGTATCTGCGCGCCGACTACA
GCCTAGAGTGCTTTACCAGTACTCACTCGGTGTATACAACTTATGCAGGG
TTCATGGTGCTCGTATACCCGGTCGGAATCCCAATCGGCTTTTCTTGGTT
GCTGTTAAAAACTCGACATGGTATCAACAACGTCAATGCAACCCCTAGAC
CTGGGGTACAACCACATCCAGAGTCCCTCGAAGCTGTGGATGCCATCAAG
GACCTCTGGGCACCGTACAAGCCAAACCGCTACTTTTACGAGGTTATCGA
GTGCGGTCGACGGGTTGTACTTACTGGCCTCGCTGCCTTCATTTACCCTG
GCAGCACGGCGCAGGTGGCAATTGAAGCATTGTTCGCGGTCATATTCTAC
GCCATATCCGAAATTTTGAGTCCATTTGCCTACCCCTTGGATGCGTGGTT
GTACCGTTCCGGATCATGGGTAACTTATCTCAGTATGTACCTGGCGCTGC
TTCTGAAGGCAGACGCAGCAGGCGTTGAGAGCTACAGCCAGAGTGTGCTT
GCCGGATTGTTGATCGCCGCCCACTGTGGCATGATATGTGTACTAGTCGC
TCACGCCCTCTTGCCCGCGTTGAAAAGACTAACCCAAATTCGAGTTGTCA
TGGTGCCCATACCGGCTCAAAACCCGTCTCAAGTGTTTAGTCCTGAGCTG
TTGAACGAAGGCGATCTTGGGGGGATCGAAGAAGATCGACTCTACAACAT
TCCGCAGCGCTATAGGTCCAGCATTTGATTCTCCAGCGTGGTGCGCGTTC
AGTACCCTCCGGCGTACGAGAAGTTCATGTCAGCGCTAAATGTCGTCAAT
ATGAATTTGGGGGACATCCTGTCGCTCTCGTGTGTCTTGGAGACGAATTT
CTATGTACAGCTTGTTTTGGCGACTCTCGGTCCAATCGTGGTGCTCGGTG
TGCTGGCGGTTACCTACCAAGTCGCCAAAGCACGGAACGGCCATTCGATC
CCTGCGATGCAGAAGGCGAAGGAGAAGCACGTCTCCGTGGCCTTATTTCT
ACTATTCGTCGTCTACTCTTCCGTATCTTACACGATTTTCCAGACATTCA
ACTGCGACACCTTGGATTCCGGTGTCGTGTATCTGCGCGCCGACTACAGC
CTAGAGTGCTTTACCAGTACTCACTCGGTGTATACAACTTATGCAGGGTT
CATGGTGCTCGTATACCCGGTCGGAATCCCAATCGGCTTTTCTTGGTTGC
TGTTAAAAACTCGACATGGTATCAACAACGTCAATGCAACCCCTAGACCT
GGGGTACAACCACATCCAGAGTCCCTCGAAGCTGTGGATGCCATCAAGGA
CCTCTGGGCACCGTACAAGCCAAACCGCTACTTTTACGAGGTTATCGAGT
GCGGTCGACGGGTTGTACTTACTGGCCTCGCTGCCTTCATTTACCCTGGC
AGCACGGCGCAGGTGGCAATTGAAGCATTGTTCGCGGTCATATTCTACGC
CATATCCGAAATTTTGAGTCCATTTGCCTACCCCTTGGATGCGTGGTTGT
ACCGTTCCGGATCATGGGTAACTTATCTCAGTATGTACCTGGCGCTGCTT
CTGAAGGCAGACGCAGCAGGCGTTGAGAGCTACAGCCAGAGTGTGCTTGC
CGGATTGTTGATCGCCGCCCACTGTGGCATGATATGTGTACTAGTCGCTC
ACGCCCTCTTGCCCGCGTTGAAAAGACTAACCCAAATTCGAGTTGTCATG
GTGCCCATACCGGCTCAAAACCCGTCTCAAGTGTTTAGTCCTGAGCTGTT
GAACGAAGGCGATCTTGGGGGGATCGAAGAAGATCGACTCTACAACATTC
CGCAGCGCTATAGGTCCAGCATTTGA
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