mRNA_H-elongata_contig1536.3534.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig1536.3534.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE) HSP 1 Score: 652 bits (1682), Expect = 2.600e-215 Identity = 350/724 (48.34%), Postives = 467/724 (64.50%), Query Frame = 2
Query: 8 IALTSASTIHVDGRSSFSNNEANDDGGAIYASGSWVFIENGTHFISNIAHTGSGGGVYTSRAVVAIYGAIFTQNRGVWGGGIAHFSSGSTWNKNVDYSGPANVTGCTFAGNVAVDGGAMYSAAGYDMVVNCSFSENFAVVQXGALLHSGVLAVLTQSIFESNRAGQDGLAVMSLGLAENISDVAFRNNSFFCGSGKYGYEEN---DEVSDTCRFDVVCSRCASQCDEAPSSIDL-NGATVPVCEVVPTGVNTSAESGMTVEALDLLNGYYRTSNRSRNVMECYRLEACVGGSNADHYCAQGYTGPYCATCEARYGSGFQYSCHGCQGYDKMATVGGAISVLALIFIAVTLMVSYLVCVVEIPVSVGNGSWKKRLSDFRDSVISAIPLTAIKIVVAAWQIITQFSSVVRVQYPPAYEKFMSALNVVNMNLGDILSLSCVLETNFYVQLVLATLGPIVVLGVLAVTYQVAKARNGHSIPAMQKAKEKHVSVALFLLFVVYSSVSYTIFQTFNCDTLDSGVVYLRADYSLECFTSTHSVYTTYAGFMVLVYPVGIPIGFSWLLLKTRHGINNVNATPRP-GVQPHPESLEAVDAIKDLWAPYKPNRYFYEVIECGRRVVLTGLAAFIYPGSTAQVAIEALFAVIFYAISEILSPFAYPLDAWLYRSGSWVTYLSMYLALLLKADAAGVESYSQSVLAGLLIAAHCGMICVLVAHALLPALKRLTQIR 2164
IA+T S++ + G F N+A ++GGA S V E GT F N S ++ + SG N T C F GN AVDGGAMYSAAGYD + +C F +N AV GA LHSGVL L +S F NRA GLAV SLG+A NI+D F +N+++C SG+YGYE DEVS TCRF VVCS CA+ C++ P S+ + N A VP+CE TGV+TS + G+T+ L+LL GYYRTS S+NV++CY+ EAC+GG++ YC +GY G YCA C+ Y SG+Q+SC C G + + +G ++++ + + + L+++ LV VV+ +W KRL+ RD ++ A+PLT+IKIVV AWQI+TQFSSVV V YP YE F++ LNVVN +LG +LS+SC+++ NFY +L T+GP+VV G LA TY ++++RN HS MQ AK KH+S+ALF+ FVVYSSVS+ IFQTF C+TLD GV YLRADYSL C T H+ YAG M+LVYPVGIP +SW LL RH + V + G P L+ + ++DLW+ YKP RY++EV+ECGRR+ LTGLAAF+ P S AQVAIE + A IF A+S++LSPFA P D WLYR+G+W+ + SMYLALLLK DA+ +S SQ+ A +LIAAH GM+ V++ A+L + L +R
Sbjct: 351 IAVTGGSSLSISGPIPFRYNKAQENGGAXXXXXSTVVTEEGTLFDGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLFDDDDPGSGSVNATMCVFQGNSAVDGGAMYSAAGYDGIKDCRFEDNLAVGSGGAYLHSGVLVELDRSTFVGNRARDAGLAVQSLGIAGNITDTTFESNTYYCSSGQYGYEYEIGEDEVSGTCRFGVVCSSCAASCEDNPGSVVVVNDAHVPICETAMTGVDTSGDGGVTLPELNLLRGYYRTSAESQNVLKCYQEEACIGGTDVSQYCQEGYRGAYCAVCDEGYASGYQFSCSICDGENLRSAIGTSVALFFVALVGIALVIADLVRVVDEVEPDTASTWGKRLTSCRDRIVKAVPLTSIKIVVVAWQIVTQFSSVVNVVYPDIYESFLAVLNVVNFDLGFLLSVSCIVDVNFYGRLFFTTVGPLVVFGGLAATYAISRSRNRHSPAGMQAAKSKHLSIALFISFVVYSSVSFNIFQTFVCETLDDGVTYLRADYSLTCSTGVHTAMMAYAGLMILVYPVGIPTVYSWWLLSNRHDLVKVGTSGNCLGGAPR---LDHLQPMRDLWSSYKPRRYYFEVLECGRRIALTGLAAFLLPDSAAQVAIEVVLAAIFMAVSDVLSPFADPFDGWLYRTGAWIIFFSMYLALLLKVDASDEDSQSQAAFAKVLIAAHVGMVLVVLVQAVLSVRRGLVTMR 1071
BLAST of mRNA_H-elongata_contig1536.3534.1 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE) HSP 1 Score: 481 bits (1239), Expect = 1.230e-150 Identity = 284/670 (42.39%), Postives = 394/670 (58.81%), Query Frame = 2
Query: 197 VAIYGAIFTQNRGVWGGGIAHFSSGSTWNKNVDYSGPANVTGCTFAGNVAVDGGAMYSAA--GYDMVVNCSFSENFA---------------------VVQXGALLHSGVLAVLTQSIFESNRAGQDGLAVMSLGLAENISDVAFRNNSFFCGSGKYGYEENDEVSDTCRFDVVCSRCASQCDEAPSSIDLNGATVPVCEVVPTGVNTSAESGMTVEALDLLNGYYRTSNRSRNVMECYRLEACVGGSNADHYCAQGYTGPYCATCEARYGSGFQYSCHGCQGYDKMATVGGAISVLALIFIAVTLMVSYLVCVVEIPVSVGNG-SWKKRLSDFRDSVISAIPLTAIKIVVAAWQIITQFSSVVRVQYPPAYEKFMSALNVVNMNLGDILSLSCVLETNFYVQLVLATLGPIVVLGVLAVTYQVAKARNGHSIPAMQKAKEKHVSVALFLLFVVYSSVSYTIFQTFNCDTLDSGVVYLRADYSLECFTSTHSVYTTYAGFMVLVYPVGIPIGFSWLLLKTRHGINNVNATPRPGVQPHPESLEAVDAIKDLWAPYKPNRYFYEVIECGRRVVLTGLAAFIYPGSTAQVAIEALFAVIFYAISEILSPFAYPLDAWLYRSGSWVTYLSMYLALLLKADAAGVESYSQSVLAGLLIAAHCGMICVLVAHALL 2134
V +YG +F N GG IA S+G + CTF N AVDGGA+Y + G ++V NC+F N A + G + H+G L ++ +++F SN AGQDG AV S+G+ + +VAF +N+ C G+ Y++ E D+CRF++ C+RC++ CD PSS+ + +T+PVC G S+ SG TV LDL GYYRTS S+ V+ECY AC GG++ +YCA GY GPYC+ C Y G Y CH C G + VG A ++ + LV VV+ S+ + + K RLS F V++A PLT +KIVV AWQIITQF ++ YP Y+ F++AL VN+++G ILS SCV+ T+F+ +L++AT+GP+VVL +LA+T+ V + RN S A++ K KH+S ALF++F +YSSVS+T+FQTF CDTLD GV YLRADYSL C T + + YA MV VYP+GIP F+WLL R + + +QP + DLW YKP+RY+YE+IE RR+VLTG+A F+ PGS+AQ+A+ L AV+F ISE LSPF +D LYR G+ V S+Y+ALLLK + + S + S +LI A+ M LV + L
Sbjct: 376 VTLYGVLFVSNTADIGGAIALTSTGEEPTQ-------FEACTCTFDSNSAVDGGALYMSTNGGMEVVRNCNFYGNRAGESIERKASRTDDVQAALQRVEISGGTIFHTGHLGMI-ETVFASNEAGQDGTAVFSMGVVQKALNVAFASNTLNCPPGENAYDKEAE-DDSCRFELACARCSADCDAIPSSVTMADSTIPVCVESMEGTKASS-SGTTVATLDLQEGYYRTSAESQVVVECYLTSACAGGTDPKNYCADGYEGPYCSVCADGYAPGTAYQCHECSGTSMGSAVGVAXXXXXXXXXXXAVVAADLVRVVDGDDSIKDARTLKGRLSRFHAFVVTAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQDFLNALTPVNLDIGFILSYSCVVITDFFDRLLIATIGPVVVLALLALTFVVGRKRNIDSEAAVRAVKNKHLSAALFVMFFIYSSVSFTVFQTFVCDTLDDGVSYLRADYSLTCDTPRYGAFRGYAAVMVCVYPIGIPATFAWLLGSNRQDLQKADRDRLANLQP----------LGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQMAVVLLLAVVFLFISESLSPFTKKIDMALYRWGNGVVLASIYVALLLKVNVSEEGSETLSAFVVVLILANVCMAITLVVQSFL 1025
BLAST of mRNA_H-elongata_contig1536.3534.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI) HSP 1 Score: 487 bits (1254), Expect = 9.890e-146 Identity = 278/624 (44.55%), Postives = 370/624 (59.29%), Query Frame = 2
Query: 293 DYSGPANVTGCTFAGNVAV-DGGAMYSAAGYDMVVNCSFSENFAVVQXGALLHSGVLAVLTQSIFESNRAGQDGLAVMSLGLAENISDVAFRNNSFFCGSGKYGYE---ENDEV--SDTCRFDVVCSRCASQCD-EAPSSIDLNGA-TVPVCEVVPTGVNTSAESGMTVEALDLLNGYYRTSNRSRNVMECYRLEACVGGSNADHYCAQGYTGPYCATCEARYGSGFQYSCHGCQGYDKMATVGGAISVLALIFIAVTLMVSYLVCVVEI--PVSVGNGSWKKRLSDFRDSVISAIPLTAIKIVVAAWQIITQFSSVVRVQYPPAYEKFMSALNVVNMNLGDILSLSCVLETNFYVQLVLATLGPIVVLGVLAVTYQVAKARNGHSIPAMQKAKEKHVSVALFLLFVVYSSVSYTIFQTFNCDTLDSGVVYLRADYSLECFTSTHSVYTTYAGFMVLVYPVGIPIGFSWLLLKTRHGINNVNATPRPGVQPHPESLEAVDAIKDLWAPYKPNRYFYEVIECGRRVVLTGLAAFIYPGSTAQVAIEALFAVIFYAISEILSPFAYPLDAWLYRSGSWVTYLSMYLALLLKADAAGVESYSQSVLAGLLIAAHCGMICVLVAHALL 2134
D S P C F N A+ DGGA+YS A +DM+ F +N X +N F+C G++G E + D +D CRF VCSRCAS+CD E S+ +L A T+P CE P G T+ G T+ L++L G+YR+S S ++ EC+ +AC GGS YCA+GY GPYCA C A Y G+ +C C G K + + A ++ AL AV +VS LV VVE+ P G+ W++ S ++ V +PLTA+KIVV WQI+TQ+S V V+YP AY+ F+S ++VVN++LG ILS +CV +TNFY +L++AT+GP++VLG+L TY VA+ RN H AM+ + +H+SV LF++FV+Y++VSYTIF+TF CDTLD G YLRADYSL C T H+ Y YAG VLVYPVGIP F W L K RH + Q ES + DLW PYKP+ Y+YEV+EC RR+ LTG A FIYP S+AQVAI L A +F +SEILSPFA P++ WLYR+G +V + SMYLALLL+ D + SQ V +G+++ AH M V+VA LL
Sbjct: 421 DPSTPVKFLDCLFESNDALEDGGALYSVASFDMIRGSKFFQNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDNDFYCEEGEFGTETLIDKDLFGGADQCRFGRVCSRCASECDSELESAAELVDAETLPTCEEAPEGSRTTRR-GATLATLEILPGFYRSSETSTDIRECFHKQACEGGSAVGTYCAEGYIGPYCAVCSAGYSPGYSRTCKSCMGDSKKSALVFAAAIGALALAAVVALVSRLVSVVEVGPPQQQGSKGWRRTCSAWQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGVEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYLVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCVFGWWLFKNRHELK----------QEDRESQAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVIAHVAMFLVVVAQGLL 1033
BLAST of mRNA_H-elongata_contig1536.3534.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE) HSP 1 Score: 466 bits (1198), Expect = 3.400e-138 Identity = 265/619 (42.81%), Postives = 361/619 (58.32%), Query Frame = 2
Query: 323 CTFAGNVAV-DGGAMYSAAGYDMVVNCSFSENFAVVQXGALLHSGVLAVLTQSIFESNRAGQDGLAVMSLGLAENISDVAFRNNSFFCGSGKYGYE---ENDEV--SDTCRFDVVCSRCASQC-DEAPSSIDLNGA-TVPVCEVVPTGVNTSAESGMTVEALDLLNGYYRTSNRSRNVMECYRLEACVGGSNADHYCAQGYTGPYCATCEARYGSGFQYSCHGCQGYDKMATVGGAISVLALIFIAVTLMVSYLVCVVEI-------PVSVGNGSWKKRLSDFRDSVISAIPLTAIKIVVAAWQIITQFSSVVRVQYPPAYEKFMSALNVVNMNLGDILSLSCVLETNFYVQLVLATLGPIVVLGVLAVTYQVAKARNGHSIPAMQKAKEKHVSVALFLLFVVYSSVSYTIFQTFNCDTLDSGVVYLRADYSLECFTSTHSVYTTYAGFMVLVYPVGIPIGFSWLLLKTRHGINNVNATPRPGVQPHPESLEAVDAIKDLWAPYKPNRYFYEVIECGRRVVLTGLAAFIYPGSTAQVAIEALFAVIFYAISEILSPFAYPLDAWLYRSGSWVTYLSMYLALLLKADAAGVESYSQSVLAGLLIAAHCGMICVLVAHALL 2134
C F N A DGGA+YS A +D++ +FS X N F+C G++G E + D +D CRF VCSRCAS+C E + +L A T+P CE P G T+ G T+ L++L G+YR+S S ++ EC+ +AC GGS YC++GY GPYCA C A Y G+ +C C G K + + A ++ L AV ++VS LV VVE+ G+ W++ S + V +PLTA+KIVV WQI+TQ+S V ++YP AY+ F+S ++VVN++LG ILS +CV +TNFY +L++AT+GP++VLG+L TY VA+ RN H AM+ + +H+SV LF++FV+Y++VSYTIF+TF CDTLD G YLRADYSL C T H+ Y YAG VLVYPVGIP F W L K RH + + + ++P DLW PYKP+ Y+YEV+EC RR+ LTG A FIYP S+AQVAI L A +F +SEILSPFA P++ WLYR+G +V + SMYLALLL+ D + SQ V +G+++ AH M V+V LL
Sbjct: 407 CLFESNGASEDGGALYSVASFDVIRGSNFSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDFYCEEGEFGTETLIDKDLFGGADQCRFRRVCSRCASECGSELERTAELVDADTLPTCETAPEGSRTTRR-GATLATLEVLPGFYRSSETSTDIRECFHKKACDGGSAIGTYCSEGYIGPYCAVCAAGYSPGYSRTCKSCMGNSKKSALVFAAAIGLLALAAVMVLVSRLVSVVEVGPRQQXXXXXXGSKGWRRTCSALQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGIEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYVVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCIFGWWLFKNRHELKQEDREGQAELRP----------AADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVMAHVAMFLVVVVQGLL 1014
BLAST of mRNA_H-elongata_contig1536.3534.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI) HSP 1 Score: 454 bits (1167), Expect = 1.420e-134 Identity = 263/614 (42.83%), Postives = 350/614 (57.00%), Query Frame = 2
Query: 305 PANVTGCTFAGNVAV-DGGAMYSAAGYDMVVNCSFSENFAVVQXGALLHSGVLAVLTQSIFESNRAGQDGLAVMSLGLAENISDVAFRNNSFFCGSGKYGYEENDEVSDTCRFDVVCSRCASQC-DEAPSSIDL-NGATVPVCEVVPTGVNTSAESGMTVEALDLLNGYYRTSNRSRNVMECYRLEACVGGSNADHYCAQGYTGPYCATCEARYGSGFQYSCHGCQGYDKMATVGGAISVLALIFIAVTLMVSYLVCVVEI-PVSVGNGSWKKRLSDFRDSVISAIPLTAIKIVVAAWQIITQFSSVVRVQYPPAYEKFMSALNVVNMNLGDILSLSCVLETNFYVQLVLATLGPIVVLGVLAVTYQVAKARNGHSIPAMQKAKEKHVSVALFLLFVVYSSVSYTIFQTFNCDTLDSGVVYLRADYSLECFTSTHSVYTTYAGFMVLVYPVGIPIGFSWLLLKTRHGINNVNATPRPGVQPHPESLEAVDAIKDLWAPYKPNRYFYEVIECGRRVVLTGLAAFIYPGSTAQVAIEALFAVIFYAISEILSPFAYPLDAWLYRSGSWVTYLSMYLALLLKADAAGVESYSQSVLAGLLIAAHCGMICVLVAHALL 2134
P C F N A DGGA+YS AG+DMV + X SF+C G + E E D CRF +VCSRCAS+C E + + + +P CE VP G T++ G T+ L++L GYYR+S S ++ EC+ +AC GG YCA GYTGPYCA C A + G+ +SC C G + +V L+ +AV M + LV VVE P S W+++ S ++ + +PLTAIKIVV WQI+TQ+S V V+YP AY+ F+S ++VVN++LG ILSL+CV +T+FY +L+L T+ P VVLG+L TY AM K +H+SVALF++FV+Y++VSYTIF+TF CD LD G YLR+DYSL C T TH+ Y YAG M+LVYPVGIP F W L K RH + R ++P DLW PYKP+ Y+YEV+EC RR+ LTG A FIYP S+AQVAI L A++F +SE LSPFA P++ WLYR+G +V + SMYLALLL+ D + + SQ V +G+L+ AH M+ V+V LL
Sbjct: 436 PTKFLSCVFEENHASEDGGAIYSVAGFDMVKDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFYCEEGTFSTEVEIEGEDVCRFGLVCSRCASECASELEDEVTVADPDLLPACEAVPEGAQTTSRGG-TLATLEILPGYYRSSATSTDIRECFYEDACEGGKVVGEYCAAGYTGPYCAVCTAGFSPGYFHSCKSCMGDSRRRAFYVVSAVGVLVLLAVVFMAAKLVSVVETTPSSKAPSRWQQKRSVWQARMKKILPLTAIKIVVVVWQIVTQYSDVAGVEYPGAYKDFLSVVDVVNLDLGFILSLACVCDTDFYDRLLLTTICPAVVLGLLGCTYL-----------AMGVVKHRHLSVALFIMFVIYATVSYTIFETFVCDPLDDGNSYLRSDYSLTCDTETHTAYRVYAGLMILVYPVGIPCVFGWWLFKHRHELKQEGRERRAVLKP----------AADLWEPYKPSTYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAIVFMVVSEFLSPFARPVEMWLYRTGHYVVFASMYLALLLRVDVSDERNQSQEVFSGVLVIAHAAMLLVVVLQGLL 1027
BLAST of mRNA_H-elongata_contig1536.3534.1 vs. uniprot
Match: D7FPF7_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF7_ECTSI) HSP 1 Score: 394 bits (1012), Expect = 1.320e-124 Identity = 214/395 (54.18%), Postives = 280/395 (70.89%), Query Frame = 2
Query: 998 GGAISVLALIFIAVTLMVSYLVCVVEIPVSVGNGSWKKRLSDFRDSVISAIPLTAIKIVVAAWQIITQFSSVVRVQYPPAYEKFMSALNVVNMNLGDILSLSCVLETNFYVQLVLATLGPIVVLGVLAVTYQVAKARNGHSIPAMQKAKEKHVSVALFLLFVVYSSVSYTIFQTFNCDTLDSGVVYLRADYSLECFTSTHSVYTTYAGFMVLVYPVGIPIGFSWLLLKTRHGINNVNATPRPGVQPHPESLEAVDAIKDLWAPYKPNRYFYEVIECGRRVVLTGLAAFIYPGSTAQVAIEALFAVIFYAISEILSPFAYPLDAWLYRSGSWVTYLSMYLALLLKADAAGVESYSQSVLAGLLIAAHCGMICVLVAHALLPALKRLTQIRVVMVPI 2182
G AI+ L ++ V L+++ LV VV+ + + K L+ R+ + + IPLT+IKIV+ AWQI+TQFSSVV V YP YEKF+S LN+VN N G ILS SCV++TNFY +L+ AT+GP+VVLG LA+TY V+++RN HS +Q AK KH+S+ALF++FVVYSSVS+ IFQTF C+TLD GV YLRADYSL C T TH+ YAG M+ VYP GIP F+ L+ RH + V+A G +SL + ++DLWAPYKP RY++EV+ECGRR+ LTGLA FIYPGS AQVA+E +FA F IS++LSPFA PLDAWLYRSG+WV ++SM+L LLLK DA+ +S SQ + A LLI+AH GM+ + A+L L +R +PI
Sbjct: 9 GIAIAFLLVVSGGVALVIANLVRVVDDDNTGTVSACGKTLNSLRNRIANGIPLTSIKIVLVAWQIVTQFSSVVNVVYPDVYEKFLSILNLVNFNFGFILSASCVVDTNFYGRLLFATIGPLVVLGALALTYAVSRSRNRHSPAGIQTAKHKHLSIALFIMFVVYSSVSFNIFQTFVCETLDDGVEYLRADYSLVCSTDTHTAMKVYAGLMIFVYPFGIPAFFTLWLVSNRHDLVKVDANG--GSTATAKSLGNLQPMRDLWAPYKPRRYYFEVVECGRRIALTGLAVFIYPGSAAQVALEVVFAAFFIGISDVLSPFADPLDAWLYRSGAWVIFISMFLTLLLKVDASDEDSQSQELFAKLLISAHVGMVLAIAVQAVLSVKGSLVAMRDQPIPI 401
BLAST of mRNA_H-elongata_contig1536.3534.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 400 bits (1028), Expect = 7.780e-120 Identity = 261/712 (36.66%), Postives = 389/712 (54.63%), Query Frame = 2
Query: 26 STIHVDGRSSFSNNEANDDGGAIYASGSW-VFIENG-THFISNIAHTGSGGGVYTSRAVVA--IYGAIFTQNRGVWGGGIAHFSSGSTWNKNVDYSGPANVTGCTFAGNVAV-DGGAMYSAAGYDMVVNCSFSENFAVVQXGALLHSGVLAVLTQSIFESNRAGQDGLAVMSLGLAENISDVAFRNNSFFCGSGKY-GYEENDEVSDTCRFDVVCSRCASQCDEAPSSIDLNGATVPVC-EVVPTGVNTSAESGM-TVEALDLLNGYYRTSNRSRNVMECYRLEACVGG-SNADHYCAQGYTGPYCATCEARYGSGFQYSCHGCQGYDKMATVGGAISVLALIFIAVTLMVSYLVCVVEIPVSVGNGSWKKRLSDFRDSVISAIPLTAIKIVVAAWQIITQFSSVVRVQYPPAYEKFMSALNVVNMNLGDILSLSCVLETNFYVQLVLATLGPIVVLGVLAVTYQVAKARNGHSIPAMQKAKEKHVSVALFLLFVVYSSVSYTIFQTFNCDTLDSGVVYLRADYSLECFTSTHSVYTTYAGFMVLVYPVGIPIGFSWLLLKTRHGINNVNATPRPGVQPHPESLEAVDAIKDLWAPYKPNRYFYEVIECGRRVVLTGLAAFIYPGSTAQVAIEALFAVIFYAISEILSPFAYPLDAWLYRSGSWVTYLSMYLALLLKADAAGVESYSQSVLAGLLIAAHCGMICVLVAHALL 2134
ST+ +DG ++F NN + ++GGA+ G + + G T F+ N A+ +GG VY S + IF N GG ++ SG+ D P + C F N A GGA+ SA+G D+ + F N AV GAL +G +++ S E+ +G AV ++G+ IS+ F N F C + Y D + D CS C + CD + VP+C +V+P ++ ++ G+ T+E L + GY+R +N S V+ CY ++ACVGG + A YC +GY GPYCA C Y + ++C C + A++V+ L V +VSY+ V+ KR +PL +KI+V AWQI+TQF+S V YP Y++F++ L+V N ++ +LS CV++ +F+ +L+L+T+GPI+ L LA TY+ N + +Q ++HVS+ L L+F+VYS VS +FQTF CD L+ G YLRADY +EC +S H + YAGFM+L+YPVGIP + LLL+ R +V G + P V +I +LW PY+P+ Y+YEVIECGRR++LTGL FIYP + AQ+AI + V+F +SE L P+A D W+ R V ++S+Y+ALLLK D + + SQ V +L+AAH MI +V +L
Sbjct: 317 STLSIDGPTAFVNNTSGENGGALALLGGLSISVNTGETSFVDNSANL-AGGAVYVSDTAIGPTFSDVIFDSNSAQVGGAVSSLGSGNVKGGENDQLLPTTFSRCRFTFNRATATGGAVDSASGQDLFEDTVFRGNQAVT-GGALRLAGRASLVNCSFVENLSDDGEGAAVSNVGVISEISNTTFSGNVFNCAPDTFLNYTSGDAL------DEACSGCQTTCDGC-----VQPPVVPLCSDVIP---HSRSDGGLVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCPNRAGGILLATALAVIGLF--TVVAVVSYVAWRVDPNTGCAMAGHLKRY----------LPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDR----DVLEKDPDGREDPPR----VASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETIL 992
BLAST of mRNA_H-elongata_contig1536.3534.1 vs. uniprot
Match: A0A6H5JWT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT9_9PHAE) HSP 1 Score: 402 bits (1032), Expect = 3.290e-119 Identity = 261/712 (36.66%), Postives = 382/712 (53.65%), Query Frame = 2
Query: 44 GRSSFSNNEAN-DDGGAIYASGSWVFIENGTHFISNIAHT-----GSGGGVYTSRAVVAIY--GAIFTQNRGVWGGGIAHFSSGSTWNKNVDYSGPANVTGCTFAGNVAVD-GGAMYSAAGYDMVVNCSFSENFAVVQXGALLHSGVLAVLTQSIFESNRAGQDGLAVMSLGLAENISDVAFRNNSFFCGSGKYGYEENDEVSDTCRFDVVCSRCASQCDEAPSSIDLNGATVPVCEVVPTGVNTSAESGMTVEALDLLNGYYRTSNRSRNVMECYRLEACVGG-SNADHYCAQGYTGPYCATCEARYGSGFQYSCHGCQGYDKMATVGGAISVLALIFIAVTLMVSYLVCVVEIPVSVGNGSW-KKRLSDFRDSVISAIPLTAIKIVVAAWQIITQFSSVVRVQYPPAYEKFMSALNVVNMNLGDILSLSCVLETN--FYVQLVLATLGPIVVLGVLAVTYQVAKARN----GHSIPAMQKAKEKHVSVALFLLFVVYSSVSYTIFQTFNCDTLDSGVVYLRADYSLECFTSTHSVYTTYAGFMVLVYPVGIPIGFSWLLLKTRHGINNVNATPRPGVQPHPESLEAVDAIKDLWAPYKPNRYFYEVIECGRRVVLTGLAAFIYPGSTAQVAIEALFAVIFYAISEILSPFAYPLDAWLYRSGSWVTYLSMYLALLLKADAAGVESYSQSVLAGLLIAAHCGMICVLVAHA 2128
GR++F NN A DGGA+ GS + + ++ T G+GGGV++S Y G F N GG +A + +G N + PA+ GC F N A + GG + SA G + V+ F +N+A V G L G + F +N A GLA+ ++G NISD F N+FFC +G++ + E D+ R+D VC C + + S+ A P C V S E+G+++E L + GY+R SN S ++ CY EAC+GG + D+ C GY GPYCA CE+ Y S ++C C + V V A I + C I V S +RLS + +PL + KI++ WQI+TQF+S + +P Y+ F++AL+VVN +LG +++ C + N F+ +L+++TLGP++V+G LA TY VA+ RN G S ++ + KH+S L + F+VYSSVS T+FQ F CD LD G YLRADY + C ++ H YA FM+ +YPVGIP+ +++LL R + + A + + DLW PY+P R++YEVIECGRRV+LTG+ FIYP + AQVA+ L A F + E+L+P+ D WL R G + +LSM+ LLLK D + + SQ V AG+++A HC M ++ A
Sbjct: 448 GRTTFWNNTAAAGDGGALGLYGSMALSSSVVNISGDVTFTNNSAFGNGGGVFSSANTAGQYFEGVTFQYNSAAVGGAVATYGTG---NGDEVTPVPASFVGCRFMSNAATETGGGVESAFGQENFVSSHFQDNYADV--GGALQLGGKTNVDGCAFVANSASSRGLAIAAVGFV-NISDTLFEGNTFFCQAGEFVENKEQEEGDSGRYDTVCFDCPERSECYSCSVQ-EAAGRPTCSVALDNT-VSEEAGVSLETLSMSRGYWRASNSSLIILACYNPEACLGGQTGVDNSCDNGYQGPYCAVCESGYASSLAHTCTQCSSSRRNGFV-----VAAAIAVVXXXXXXXXXCAHLISGEVSEQSCLHRRLS-------AMLPLQSFKIIIVVWQILTQFASAANISFPDVYQDFINALDVVNFDLGSLVASGCWADINVDFHDRLLVSTLGPLLVVGGLASTYAVAQRRNSSASGGSQAGVEAIRHKHLSAFLLVTFLVYSSVSATVFQMFACDKLDDGHTYLRADYRILCTSAKHEALQVYAAFMIALYPVGIPLLYAYLLHHRRDVLMDPTA-----------DKASAQSTADLWEPYRPERFYYEVIECGRRVLLTGVVVFIYPNTAAQVAVTILIAFFFLMVYEMLAPYRSDSDMWLSRGGHVIVFLSMFDVLLLKVDVSDERTESQRVFAGVIVAGHCLMFLAVIVEA 1128
BLAST of mRNA_H-elongata_contig1536.3534.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE) HSP 1 Score: 404 bits (1039), Expect = 2.780e-117 Identity = 268/682 (39.30%), Postives = 372/682 (54.55%), Query Frame = 2
Query: 107 SWVFIENGTHFISNIAHTGSGGGVYTSRAVVA--IYGAIFTQNRGVWGGGIAHFSSGSTWNKNVDYSGPANVTGCTFAGNVA-VDGGAMYSAAGYDMVVNCSFSENFAVVQXGALLHSGVLAVLTQSIFESNRAGQDGLAVMSLGLAENISDVAFRNNSFFCGSGKYGYEENDEVSDTCRFDVVCSRCASQCDEAPSSIDLNGATVPVCEVVPTGVNTSAESGMTVEALDLLNGYYRTSNRSRNVMECYRLEACVGG-SNADHYCAQGYTGPYCATCEARYGSGFQYSCHGCQGYDKMATVGGAISVLALIFIAVTLMVSYLVCVVEIPVSVGNGSWKKRLSDFRDSVISAIPLTAIKIVVAAWQIITQFSSVVRVQYPPAYEKFMSALNVVNMNLGDILSLSCVLETNFYVQLVLATLGPIVVLGVLAVTYQVAKARNGHSIPAMQKAKEKHVSVALFLLFVVYSSVSYTIFQTFNCDTLDSGVVYLRADYSLECFTSTHSVYTTYAGFMVLVYPVGIPIGFSWLLLKTRHGINNVNATPR---PGVQPHPESLEAVDAIKDLWAPYKPNRYFYEVIECGRRVVLTGLAAFIYPGSTAQVAIEALFAVIFYAISEILSPFAYPLDAWLYRSGSWVTYLSMYLALLLKADAAGVESYSQSVLAGLLIAAHCGMICVLVAHAL 2131
S VF + + F SN A G+GG V S V+ FT NR GG + SSG N D P C F N A V GGA+ +AAGYD +N F N A V G L G A+LT F N A +G AV +LG+ + F N C +G Y D V D R+ VC C + S++ NG VP+C VV S T+E L+L +GY+R +N S NV+ CY +ACVGG +N +C +GY GPYC+ C Y ++C C + GG I I V + V L + + + + +G + V+ +PL +IKIVV WQI+TQFSSV V YP Y++F+ +N++N ++ I S C++E +F+ +L++AT+GP+V L +LA+TY VAK R+ S A+QK + KH+S+ L + F+VYSSVS T+FQ+F C+ LD YLRADY +EC +S H + +AG M+LVYPVGIP+ + +LL K R + + +A R P VQP I DLW PYKP R++YEVIEC RR+ LTG+ FIYP + AQVA+ + A F S +L+P+ DA + G + + SMY ALL K D + + SQ V AG+L+AAH M+ +V +
Sbjct: 1102 STVFNISSSIFESNTA--GAGGAVMLSGVVIGPEFIQINFTANRAPRGGAVYSVSSGIETNGGGDPLFPVGYKDCLFRDNEASVTGGAIETAAGYDFAINSVFEANAAGV--GGALRLGGSAILTNCTFIDNTAEDEGPAVSNLGVLDLEGTSRFSGNVLSCENGMY----LDSV-DGDRYQTVCDGCPVNNSDWIVSVE-NGDRVPIC-VVQLDHTRSEGGDTTIETLELSSGYWRATNDSANVLACYNEDACVGGMTNDPAFCQRGYEGPYCSVCSEGYSMSLAFTCTEC-----VDDHGG-------IAIMVVVGVFVLGAAIALCMHLVSGEMEGARRGVIHRVVKRLPLQSIKIVVVVWQILTQFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQP----------ISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVETI 1750
BLAST of mRNA_H-elongata_contig1536.3534.1 vs. uniprot
Match: D7G8S0_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8S0_ECTSI) HSP 1 Score: 369 bits (946), Expect = 3.160e-116 Identity = 190/345 (55.07%), Postives = 250/345 (72.46%), Query Frame = 2
Query: 1100 SWKKRLSDFRDSVISAIPLTAIKIVVAAWQIITQFSSVVRVQYPPAYEKFMSALNVVNMNLGDILSLSCVLETNFYVQLVLATLGPIVVLGVLAVTYQVAKARNGHSIPAMQKAKEKHVSVALFLLFVVYSSVSYTIFQTFNCDTLDSGVVYLRADYSLECFTSTHSVYTTYAGFMVLVYPVGIPIGFSWLLLKTRHGINNVNATPRPGVQPHPESLEAVDAIKDLWAPYKPNRYFYEVIECGRRVVLTGLAAFIYPGSTAQVAIEALFAVIFYAISEILSPFAYPLDAWLYRSGSWVTYLSMYLALLLKADAAGVESYSQSVLAGLLIAAHCGMICVLVAHALL 2134
+W KRL+ R+ + + +PLT+IKIV+ AWQI+TQFSSV+ V YP YE+F+S LNVVN NLG ILS+SC++++NFY AT+ P+VV G AVTY V+K+RN HS MQ AK KH+S+ LF++FVVYSSV + IFQTF C+ LD+G+ YLRADYSL C+T H YAG M+ VYPVGIP ++W LL RH + V A P ++ PE L+ + ++DLWAPYKP+RY++EV+ECG R+ LTGLAAF+ P S AQ AIE + A IF A+S++LSPF P DAWLYR G W+T SMYLAL+ D + ++ SQ+V A +LIAAH GM+ V+V A+L
Sbjct: 8 TWGKRLTSCRERITNVVPLTSIKIVLVAWQIVTQFSSVLNVVYPGVYERFLSVLNVVNFNLGFILSVSCIVDSNFYGCRFFATICPLVVFGAQAVTYTVSKSRNRHSPAGMQAAKSKHLSITLFIMFVVYSSVPFNIFQTFVCERLDTGMDYLRADYSLTCYTGVHKAMMVYAGLMIFVYPVGIPAFYAWWLLFIRHYLVKVGA-PNNFLERVPE-LDHLQPMRDLWAPYKPHRYYFEVVECGHRIALTGLAAFLLPNSAAQAAIEVVLAAIFVAVSDVLSPFVDPFDAWLYRIGGWITCFSMYLALV---DVSDEDNQSQAVFAKVLIAAHAGMVAVIVVQAVL 347 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1536.3534.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1536.3534.1 >prot_H-elongata_contig1536.3534.1 ID=prot_H-elongata_contig1536.3534.1|Name=mRNA_H-elongata_contig1536.3534.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=646bp MYSAAGYDMVVNCSFSENFAVVQGGALLHSGVLAVLTQSIFESNRAGQDGback to top mRNA from alignment at H-elongata_contig1536:7147..11961+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1536.3534.1 ID=mRNA_H-elongata_contig1536.3534.1|Name=mRNA_H-elongata_contig1536.3534.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4815bp|location=Sequence derived from alignment at H-elongata_contig1536:7147..11961+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1536:7147..11961+ >mRNA_H-elongata_contig1536.3534.1 ID=mRNA_H-elongata_contig1536.3534.1|Name=mRNA_H-elongata_contig1536.3534.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3876bp|location=Sequence derived from alignment at H-elongata_contig1536:7147..11961+ (Himanthalia elongata Himel1 dioecious)back to top |