mRNA_H-elongata_contig151938.3436.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig151938.3436.1 vs. uniprot
Match: A0A6H5JHZ0_9PHAE (GT20 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHZ0_9PHAE) HSP 1 Score: 254 bits (649), Expect = 1.060e-81 Identity = 118/130 (90.77%), Postives = 125/130 (96.15%), Query Frame = 1
Query: 4 FQSVNQSFADTIQDVYRDGDLIWVHDYHLTMVPQMLRNVLPSAKIGFFLHLPFPSSEIYRILPCREVILEGILSSDLVGFQTYDYARHFLSTVESLLDANCSPQGVEHNGHFANVAICPVGIDPDAVVKV 393
+++ NQSFADTIQDVYRDGDLIWVHDYHLTM+PQMLRNVLPSAKIGFFLHLPFPSSEIYRILP RE ILEGILSSD+VGFQTYDYARHFLSTVESLLDANCSPQGVEHNGHFANV ICPVGIDPDAV ++
Sbjct: 159 YKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPSAKIGFFLHLPFPSSEIYRILPYREQILEGILSSDIVGFQTYDYARHFLSTVESLLDANCSPQGVEHNGHFANVTICPVGIDPDAVTQL 288
BLAST of mRNA_H-elongata_contig151938.3436.1 vs. uniprot
Match: A0A836CRD5_9STRA (Glycosyltransferase family 20-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRD5_9STRA) HSP 1 Score: 211 bits (536), Expect = 1.200e-60 Identity = 99/147 (67.35%), Postives = 119/147 (80.95%), Query Frame = 1
Query: 4 FQSVNQSFADTIQDVYRDGDLIWVHDYHLTMVPQML----------------RNVLPSAKIGFFLHLPFPSSEIYRILPCREVILEGILSSDLVGFQTYDYARHFLSTVESLLDANCSPQGVEHNGHFANVAICPVGIDPDAVVKVS 396
+++VNQ FAD IQ++YRDGD++WVHDYHL ++PQML R +LPSAKI FFLH+PFPSSEIYRILP RE ILEG+L SDL+GFQTYDYARHFLSTVESLLDA+CS QGVE+NGHFA+ AICPVGIDP+ V+++
Sbjct: 504 YKAVNQQFADAIQEIYRDGDMVWVHDYHLMLLPQMLTIXXXXXXXXXXXXXXRALLPSAKISFFLHVPFPSSEIYRILPNREQILEGLLGSDLLGFQTYDYARHFLSTVESLLDADCSRQGVEYNGHFASAAICPVGIDPEQWVQLA 650
BLAST of mRNA_H-elongata_contig151938.3436.1 vs. uniprot
Match: A0A7S2SJ77_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJ77_9STRA) HSP 1 Score: 186 bits (471), Expect = 3.750e-57 Identity = 83/123 (67.48%), Postives = 100/123 (81.30%), Query Frame = 1
Query: 4 FQSVNQSFADTIQDVYRDGDLIWVHDYHLTMVPQMLRNVLPSAKIGFFLHLPFPSSEIYRILPCREVILEGILSSDLVGFQTYDYARHFLSTVESLLDANCSPQGVEHNGHFANVAICPVGID 372
+ SVNQ+FADTIQDVY GDLIWV DYH ++PQMLRN+LPSA+IGFFLH+PFPSSE+YRI+P RE IL G+L +DL+GFQT+DYARHFL++ ES+L SPQ VE H + ICPVGID
Sbjct: 98 YVSVNQAFADTIQDVYEPGDLIWVQDYHFLLLPQMLRNLLPSARIGFFLHVPFPSSELYRIMPYREEILTGLLHADLIGFQTFDYARHFLASCESILFCETSPQSVEFRDHSTGICICPVGID 220
BLAST of mRNA_H-elongata_contig151938.3436.1 vs. uniprot
Match: A0A7R9U234_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U234_9STRA) HSP 1 Score: 185 bits (469), Expect = 1.450e-55 Identity = 83/124 (66.94%), Postives = 100/124 (80.65%), Query Frame = 1
Query: 4 FQSVNQSFADTIQDVYRDGDLIWVHDYHLTMVPQMLRNVLPSAKIGFFLHLPFPSSEIYRILPCREVILEGILSSDLVGFQTYDYARHFLSTVESLLDANCSPQGVEHNGHFANVAICPVGIDP 375
+ VNQ FADTI+D+Y DGDL+W+HDYHL +VPQMLR +LP AKIGFFLH+ FPSSE+YRILP RE IL GIL+SDL+GFQTY YAR+F T ES+L + SP VE GH+ANV I P+GI+P
Sbjct: 188 YVQVNQHFADTIRDIYEDGDLVWIHDYHLMLVPQMLRALLPHAKIGFFLHVAFPSSELYRILPYREEILRGILASDLIGFQTYQYARYFFQTCESILGLDWSPVAVEDAGHYANVCIIPIGINP 311
BLAST of mRNA_H-elongata_contig151938.3436.1 vs. uniprot
Match: A0A7S1UL28_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UL28_9STRA) HSP 1 Score: 185 bits (469), Expect = 5.510e-52 Identity = 87/121 (71.90%), Postives = 97/121 (80.17%), Query Frame = 1
Query: 13 VNQSFADTIQDVYRDGDLIWVHDYHLTMVPQMLRNVLPSAKIGFFLHLPFPSSEIYRILPCREVILEGILSSDLVGFQTYDYARHFLSTVESLLDANCSPQGVEHNGHFANVAICPVGIDP 375
VNQ FAD I+DVY DGDLIWVHDYHL +VPQMLR +LP AKIGFFLH+ FPSSE+YRILP RE IL GILSSDLVGFQTY YAR+F T ES+L + SP VE GH+ANV I P+GI P
Sbjct: 202 VNQLFADAIRDVYEDGDLIWVHDYHLMLVPQMLRALLPHAKIGFFLHIAFPSSELYRILPYREEILRGILSSDLVGFQTYQYARYFFQTCESILGLDWSPVAVEDAGHYANVCIIPIGIQP 322
BLAST of mRNA_H-elongata_contig151938.3436.1 vs. uniprot
Match: F0Y4H1_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4H1_AURAN) HSP 1 Score: 179 bits (454), Expect = 1.610e-50 Identity = 78/131 (59.54%), Postives = 101/131 (77.10%), Query Frame = 1
Query: 4 FQSVNQSFADTIQDVYRDGDLIWVHDYHLTMVPQMLRNVLPSAKIGFFLHLPFPSSEIYRILPCREVILEGILSSDLVGFQTYDYARHFLSTVESLLDANCSPQGVEHNGHFANVAICPVGIDPDAVVKVS 396
+ SVNQ+FAD ++DV DGDLIW+ DYH ++P MLR + P AK+GFFLH+PFPSSE+YR LP RE +L G+L++DL+GFQTYDYARHFLS+ E +L SP +EH+GH V +CPVGI+P +VV S
Sbjct: 90 YVSVNQAFADAVRDVAADGDLIWIQDYHFMLLPSMLRALSPHAKLGFFLHVPFPSSELYRTLPFREEVLHGLLAADLLGFQTYDYARHFLSSCEMVLGIETSPDRIEHDGHQTRVCVCPVGIEPSSVVARS 220
BLAST of mRNA_H-elongata_contig151938.3436.1 vs. uniprot
Match: A0A7S3YM13_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YM13_HETAK) HSP 1 Score: 172 bits (436), Expect = 3.580e-49 Identity = 77/129 (59.69%), Postives = 99/129 (76.74%), Query Frame = 1
Query: 4 FQSVNQSFADTIQDVYRDGDLIWVHDYHLTMVPQMLRNVLPSAK--IGFFLHLPFPSSEIYRILPCREVILEGILSSDLVGFQTYDYARHFLSTVESLLDANCSPQGVEHNGHFANVAICPVGIDPDAV 384
+ SVNQ+FAD IQ++YR+GD+IWV DYH ++P++LRN L A IG + HLPFPSSE+YRILP RE +L G L+++LVGFQTYDY RHFLST E LL +C G+E+ G F VAICP+GIDP ++
Sbjct: 217 YASVNQTFADAIQEIYREGDIIWVQDYHFMLLPRLLRNQLDGANPLIGMYFHLPFPSSELYRILPFREELLLGALAANLVGFQTYDYVRHFLSTAEFLLGVDCRHNGLEYEGSFTTVAICPIGIDPGSL 345
BLAST of mRNA_H-elongata_contig151938.3436.1 vs. uniprot
Match: A0A8J2X0D0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X0D0_9STRA) HSP 1 Score: 176 bits (447), Expect = 1.150e-48 Identity = 75/127 (59.06%), Postives = 98/127 (77.17%), Query Frame = 1
Query: 4 FQSVNQSFADTIQDVYRDGDLIWVHDYHLTMVPQMLRNVLPSAKIGFFLHLPFPSSEIYRILPCREVILEGILSSDLVGFQTYDYARHFLSTVESLLDANCSPQGVEHNGHFANVAICPVGIDPDAV 384
+ NQ+FAD I+DV +DGDLIW+ DYH ++P+MLR + P +K+GFFLH+PFPSSE+YR LP RE IL G+L++DL+GFQTYDYARHFLS+ E +L +P VEH GH V +CPVGI+P+ V
Sbjct: 171 YVGANQAFADVIRDVAQDGDLIWIQDYHFMLLPRMLRQLSPDSKLGFFLHVPFPSSELYRTLPFREEILRGLLAADLLGFQTYDYARHFLSSCEMVLGLETAPDHVEHEGHLTRVCVCPVGIEPEVV 297
BLAST of mRNA_H-elongata_contig151938.3436.1 vs. uniprot
Match: A0A7S3NKN0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKN0_9STRA) HSP 1 Score: 173 bits (439), Expect = 1.390e-47 Identity = 77/132 (58.33%), Postives = 100/132 (75.76%), Query Frame = 1
Query: 4 FQSVNQSFADTIQDVYRDGDLIWVHDYHLTMVPQMLRNVL-----PSAKIGFFLHLPFPSSEIYRILPCREVILEGILSSDLVGFQTYDYARHFLSTVESLLDANCSPQGVEHNGHFANVAICPVGIDPDAV 384
+ + N+++AD + DV R+GDLIW+ DYH +VPQMLR+ L AK+GFFLH+PFPSSE+YR+LP RE IL GIL++DLVGFQTYDYARHFLS+ E +L SP +EH+GH + +CPVGI+PD V
Sbjct: 288 YVAANRAYADAVADVAREGDLIWIQDYHFMLVPQMLRSTLGETKAAEAKLGFFLHVPFPSSELYRMLPYREEILRGILAADLVGFQTYDYARHFLSSCEIVLGIETSPDRIEHDGHQTRICVCPVGIEPDVV 419
BLAST of mRNA_H-elongata_contig151938.3436.1 vs. uniprot
Match: A0A6M7YNS9_FUSOX (Alpha,alpha-trehalose-phosphate synthase n=1 Tax=Fusarium oxysporum Fo47 TaxID=660027 RepID=A0A6M7YNS9_FUSOX) HSP 1 Score: 164 bits (415), Expect = 2.370e-47 Identity = 76/133 (57.14%), Postives = 94/133 (70.68%), Query Frame = 1
Query: 4 FQSVNQSFADTIQDVYRDGDLIWVHDYHLTMVPQMLRNVL----PSAKIGFFLHLPFPSSEIYRILPCREVILEGILSSDLVGFQTYDYARHFLSTVESLLDANCSPQGVEHNGHFANVAICPVGIDPDAVVK 390
+Q VN+ FA T+ +DGDLIWVHDYHL ++PQMLR + + KIGFFLH PFPSSEIYRILP RE +L G+L DL+GF TYDYARHFLS+ +L+ +P GV+ NG F V P+GIDPD V+
Sbjct: 128 YQEVNRLFAKTVIKDVQDGDLIWVHDYHLMLLPQMLREEIGESKKNVKIGFFLHTPFPSSEIYRILPVREALLTGLLDCDLIGFHTYDYARHFLSSCSRILECPTTPNGVDWNGRFVTVGAFPIGIDPDNFVE 260 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig151938.3436.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig151938.3436.1 >prot_H-elongata_contig151938.3436.1 ID=prot_H-elongata_contig151938.3436.1|Name=mRNA_H-elongata_contig151938.3436.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bp FFQSVNQSFADTIQDVYRDGDLIWVHDYHLTMVPQMLRNVLPSAKIGFFLback to top mRNA from alignment at H-elongata_contig151938:226..1386- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig151938.3436.1 ID=mRNA_H-elongata_contig151938.3436.1|Name=mRNA_H-elongata_contig151938.3436.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1161bp|location=Sequence derived from alignment at H-elongata_contig151938:226..1386- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig151938:226..1386- >mRNA_H-elongata_contig151938.3436.1 ID=mRNA_H-elongata_contig151938.3436.1|Name=mRNA_H-elongata_contig151938.3436.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=804bp|location=Sequence derived from alignment at H-elongata_contig151938:226..1386- (Himanthalia elongata Himel1 dioecious)back to top |