mRNA_H-elongata_contig15077.3381.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig15077.3381.1 vs. uniprot
Match: A0A6H5L9W6_9PHAE (Fe2OG dioxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L9W6_9PHAE) HSP 1 Score: 263 bits (671), Expect = 5.620e-82 Identity = 121/196 (61.73%), Postives = 150/196 (76.53%), Query Frame = 1
Query: 1 NAWVLRRVMYRWKATMTEYFSTMHALAGRVTDLLAVSIGVDPAYFGGCFSESLSALRLIHYSSEVSDPEKGVFGTGQHSDFGMLTLLATDEVPGLQVLIRDEWIDVNPKPGAFICNVGDMFQRW---TNDHLKSTVHRVVNKLGRERYSIAFFVAPNFDTKVACLPQFCSEDDPAKYPRTTCGMHLLEKFSRLHSE 579
N W ++ W+ATM YF+TMHA+ R++ LL+V +G+DP++F C SE ALRL+HYS+EVSDP KGV G G HSD+G+LTLLATDEVPGLQV + EW+DV P+ GAFICN+GDM QRW TND L+STVHRVVNKLGRERYSI FF NFDT+V CLPQ CSE++PAKYP T G ++L K+S+ H +
Sbjct: 116 NQWPSEDLVPGWRATMQRYFTTMHAVGVRLSGLLSVGLGLDPSFFESCTSEMAHALRLLHYSAEVSDPAKGVMGAGAHSDYGLLTLLATDEVPGLQVRLNGEWLDVPPREGAFICNLGDMLQRWRVVTNDELRSTVHRVVNKLGRERYSIPFFFELNFDTEVVCLPQCCSEENPAKYPPVTAGSYILNKYSQTHQD 311
BLAST of mRNA_H-elongata_contig15077.3381.1 vs. uniprot
Match: D7FYW9_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYW9_ECTSI) HSP 1 Score: 263 bits (671), Expect = 5.800e-82 Identity = 117/193 (60.62%), Postives = 147/193 (76.17%), Query Frame = 1
Query: 1 NAWVLRRVMYRWKATMTEYFSTMHALAGRVTDLLAVSIGVDPAYFGGCFSESLSALRLIHYSSEVSDPEKGVFGTGQHSDFGMLTLLATDEVPGLQVLIRDEWIDVNPKPGAFICNVGDMFQRWTNDHLKSTVHRVVNKLGRERYSIAFFVAPNFDTKVACLPQFCSEDDPAKYPRTTCGMHLLEKFSRLHSE 579
N W ++ WK TM E+F MHA+ R+ LL+V +G+DPA FG CFSE LRL+HYS+EVSDP KGV G G H+D+G++TLLATDEVPGLQV + +W+D+ P+ GAFICN+GDM QRWTND L+STVHRVVNKLG ERYSI FF PNFDT+VAC PQFCSE++PA+YP G +L+ K+S+ H +
Sbjct: 118 NQWPSEELVPGWKTTMQEHFVRMHAVGERLAGLLSVGLGLDPAVFGTCFSEFAHTLRLLHYSAEVSDPGKGVMGAGAHTDWGLMTLLATDEVPGLQVRLNGKWLDIPPRKGAFICNLGDMLQRWTNDDLRSTVHRVVNKLGLERYSIPFFFEPNFDTEVACFPQFCSEENPARYPPVKAGAYLMGKYSQTHQD 310
BLAST of mRNA_H-elongata_contig15077.3381.1 vs. uniprot
Match: A0A7J7QM00_9CHLO (Fe2OG dioxygenase domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QM00_9CHLO) HSP 1 Score: 215 bits (547), Expect = 2.170e-63 Identity = 104/199 (52.26%), Postives = 135/199 (67.84%), Query Frame = 1
Query: 1 NAWVLRRVMYRWKATMTEYFSTMHALAGRVTDLLAVSIGVDPAYFGGCFSESLSALRLIHYSSEVSDPEKGVFGTGQHSDFGMLTLLATDEVPGLQVLIRDEWIDVNPKPGAFICNVGDMFQRWTNDHLKSTVHRVVNKLGRERYSIAFFVAPNFDTKVACLPQFCSEDDPAKYPRTTCGMHLLEKFSRLHSEQGIIKE 597
N W +++ ++ T+T YF + AL R+ LLA+S+G+ P YF F+ + ALR +HY++EVS P +GVFG G HSD+GMLTLLATDEVPGLQV + W +V P PGAFI N+GDM +RWTN KST+HRV+N G+ERYSI FF PNF KV CLP SE PA YP TT G HLL +++ H+ + K+
Sbjct: 120 NQWPPEQLVPGFRLTVTAYFDALAALGMRLLRLLALSLGLPPDYFAPHFTHPMVALRPLHYTAEVSAPGQGVFGAGAHSDYGMLTLLATDEVPGLQVHLNGSWQEVAPLPGAFIVNLGDMLERWTNGLFKSTLHRVINTTGQERYSIPFFFEPNFTAKVECLPCCVSEARPAAYPPTTAGEHLLAMYAQTHAGYDVNKK 318
BLAST of mRNA_H-elongata_contig15077.3381.1 vs. uniprot
Match: A0A250WWS1_9CHLO (Fe2OG dioxygenase domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WWS1_9CHLO) HSP 1 Score: 207 bits (528), Expect = 3.050e-60 Identity = 95/192 (49.48%), Postives = 127/192 (66.15%), Query Frame = 1
Query: 1 NAWVLRRVMYRWKATMTEYFSTMHALAGRVTDLLAVSIGVDPAYFGGCFSESLSALRLIHYSSEVSDPEKGVFGTGQHSDFGMLTLLATDEVPGLQVLIRDEWIDVNPKPGAFICNVGDMFQRWTNDHLKSTVHRVVNKLGRERYSIAFFVAPNFDTKVACLPQFCSEDDPAKYPRTTCGMHLLEKFSRLHS 576
N W +M + T +YF + AL R+ LLA+++ + P YF F + LR +HYS +SDP +G+FG G H+D+GMLT+LATDEVPGLQ+ +W V+P+ GAFI N+GDM +RWTN KST+HRV+N G ERYSIA+F P FD V CLPQ C D+P +YP TT G HLL+K++ H+
Sbjct: 147 NQWPEESLMPGLRDTYQQYFEELRALGMRLLRLLALALDLPPLYFHPYFEPPMIMLRPLHYSGVISDPGEGIFGAGAHTDYGMLTILATDEVPGLQIRQNGKWTHVSPRNGAFIINLGDMVERWTNGSFKSTLHRVINTTGSERYSIAYFFEPCFDAVVECLPQCCGGDNPPRYPPTTAGQHLLDKYAATHA 338
BLAST of mRNA_H-elongata_contig15077.3381.1 vs. uniprot
Match: A0A7S3QLD7_DUNTE (Hypothetical protein n=2 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QLD7_DUNTE) HSP 1 Score: 204 bits (519), Expect = 6.990e-60 Identity = 97/200 (48.50%), Postives = 132/200 (66.00%), Query Frame = 1
Query: 1 NAWVLRRVMYRWKATMTEYFSTMHALAGRVTDLLAVSIGVDPAYFGGCFSESLSALRLIHYSSEVSDPEKGVFGTGQHSDFGMLTLLATDEVPGLQVLI-RDEWIDVNPKPGAFICNVGDMFQRWTNDHLKSTVHRVVNKLGRERYSIAFFVAPNFDTKVACLPQFCSEDDPAKYPRTTCGMHLLEKFSRLHSEQGIIKE 597
N W ++ ++A+M +Y M+ L R+ LLA+ +G+ P +F F + LR +HY+ +VS P +GVFG G HSD+GMLTLL TD+VPGLQ+ W+DV PKP FI N+GDM +RWTN KST+HRVVN G+ERYS+A F PNFDT V CLPQ CS + P ++P TT G HLL+K++ H+ +K+
Sbjct: 73 NQWPNEHLVPGYRASMEQYMRAMNELGHRLLRLLALGLGLPPDHFDRFFDRPMIFLRPLHYAPKVSAPSEGVFGAGAHSDYGMLTLLKTDDVPGLQIHTDATGWMDVPPKPECFIINLGDMLERWTNGMYKSTLHRVVNTTGKERYSLACFFEPNFDTIVECLPQCCSPERPPQFPPTTSGQHLLDKYASTHAGYANLKQ 272
BLAST of mRNA_H-elongata_contig15077.3381.1 vs. uniprot
Match: D8TU52_VOLCA (Fe2OG dioxygenase domain-containing protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TU52_VOLCA) HSP 1 Score: 205 bits (521), Expect = 1.150e-59 Identity = 97/201 (48.26%), Postives = 128/201 (63.68%), Query Frame = 1
Query: 1 NAWVLRRVMYRWKATMTEYFSTMHALAGRVTDLLAVSIGVDPAYFGGCFSESLSALRLIHYSSEVSDPEKGVFGTGQHSDFGMLTLLATDEVPGLQVLIRD---------EWIDVNPKPGAFICNVGDMFQRWTNDHLKSTVHRVVNKLGRERYSIAFFVAPNFDTKVACLPQFCSEDDPAKYPRTTCGMHLLEKFSRLHS 576
N W +++ R++ +Y+ ++ L R+ L+A+S+ + P YF F + ALR +HYS E SDP GVFG G HSD+GMLT+LATD+VPGLQV W DV P PG FI N+GDM +RWTN +ST+HRV+N GRERYSIAFF PNFD +V LP C D+P +YP TT G HLL+K++ H+
Sbjct: 96 NQWPDPQLLPRYREVTWQYYEALYGLGMRLLRLVALSLDLPPDYFAAAFDRPMVALRPLHYSGERSDPGAGVFGAGAHSDYGMLTILATDDVPGLQVGGAGGRGRAGGNRRWWDVEPIPGTFIINLGDMLERWTNGRYRSTLHRVINTTGRERYSIAFFFEPNFDAQVVALPCCCGPDNPPRYPPTTAGQHLLDKYAATHA 296
BLAST of mRNA_H-elongata_contig15077.3381.1 vs. uniprot
Match: A0A7S3VI83_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VI83_DUNTE) HSP 1 Score: 204 bits (519), Expect = 2.480e-59 Identity = 97/200 (48.50%), Postives = 132/200 (66.00%), Query Frame = 1
Query: 1 NAWVLRRVMYRWKATMTEYFSTMHALAGRVTDLLAVSIGVDPAYFGGCFSESLSALRLIHYSSEVSDPEKGVFGTGQHSDFGMLTLLATDEVPGLQVLI-RDEWIDVNPKPGAFICNVGDMFQRWTNDHLKSTVHRVVNKLGRERYSIAFFVAPNFDTKVACLPQFCSEDDPAKYPRTTCGMHLLEKFSRLHSEQGIIKE 597
N W ++ ++A+M +Y M+ L R+ LLA+ +G+ P +F F + LR +HY+ +VS P +GVFG G HSD+GMLTLL TD+VPGLQ+ W+DV PKP FI N+GDM +RWTN KST+HRVVN G+ERYS+A F PNFDT V CLPQ CS + P ++P TT G HLL+K++ H+ +K+
Sbjct: 116 NQWPNEHLVPGYRASMEQYMRAMNELGHRLLRLLALGLGLPPDHFDRFFDRPMIFLRPLHYAPKVSAPSEGVFGAGAHSDYGMLTLLKTDDVPGLQIHTDATGWMDVPPKPECFIINLGDMLERWTNGMYKSTLHRVVNTTGKERYSLACFFEPNFDTIVECLPQCCSPERPPQFPPTTSGQHLLDKYASTHAGYANLKQ 315
BLAST of mRNA_H-elongata_contig15077.3381.1 vs. uniprot
Match: A0A5J4Y7A5_9CHLO (Hyoscyamine 6-isoform 1 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y7A5_9CHLO) HSP 1 Score: 203 bits (516), Expect = 1.250e-58 Identity = 94/199 (47.24%), Postives = 135/199 (67.84%), Query Frame = 1
Query: 1 NAWVLRRVMYRWKATMTEYFSTMHALAGRVTDLLAVSIGVDPAYFGGCFSESLSALRLIHYSSEVSDPEKGVFGTGQHSDFGMLTLLATDEVPGLQVLIRDEWIDVNPKPGAFICNVGDMFQRWTNDHLKSTVHRVVNKLGRERYSIAFFVAPNFDTKVACLPQFCSEDDPAKYPRTTCGMHLLEKFSRLHSE-QGIIK 594
N W ++ +KA M Y + LA R+ L+A+++ + +F F + + LR +HY++++S P++G++G G H+D+G+LT+LATDE PGLQV +W V P PG FI N+GDM +RWTN + KS++HRVVN LG+ERYS AFF PNF KV CLPQ C +D PAK+P TTCG +LL+KF+ H++ G +K
Sbjct: 135 NQWPPEALLPGYKAAMNTYMDAVRNLADRLLPLIAMALRLPSNFFDLYFHKPIGTLRPLHYNAQMSLPDEGIYGAGAHTDWGVLTILATDENPGLQVFSGGKWAHVKPVPGTFIINLGDMLERWTNGYFKSSLHRVVNHLGKERYSTAFFYEPNFFAKVECLPQ-CCKDKPAKFPPTTCGQYLLDKFAATHADYSGAVK 332
BLAST of mRNA_H-elongata_contig15077.3381.1 vs. uniprot
Match: A0A0D2LKH6_9CHLO (Fe2OG dioxygenase domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2LKH6_9CHLO) HSP 1 Score: 202 bits (514), Expect = 3.100e-58 Identity = 97/195 (49.74%), Postives = 128/195 (65.64%), Query Frame = 1
Query: 1 NAWVLRRVMYRWKATMTEYFSTMHALAGRVTDLLAVSIGVDPAYFGGCFSESLSALRLIHYSSEVSDPEKGVFGTGQHSDFGMLTLLATDEVPGLQVLIRDEWIDVNPKPGAFICNVGDMFQRWTNDHLKSTVHRVVNKLGRERYSIAFFVAPNFDTKVACLPQFCSEDDPAKYPRTTCGMHLLEKFSRLHSEQG 585
N W +++ ++AT YFS++ AL R+ LLA+S+ ++P +F F + LR +HYS+EVS P GVFG G HSD+GMLT+LATD PGLQV + W+DV P F+CN+GDM +RWTN KST+HRVV+ GR+RYSI FF PNF+ V LP + D PA YP TT G HLLEK++ H+ G
Sbjct: 130 NLWPPEKLLPGFRATTEAYFSSVTALGHRLLRLLAISLDLEPGHFDPFFDPPMVFLRPLHYSAEVSRPGDGVFGAGAHSDYGMLTVLATDGQPGLQVHVGGAWVDVPAAPRCFVCNLGDMLERWTNGLYKSTLHRVVSTTGRDRYSIPFFFEPNFNAVVEALPCCVTADRPAAYPPTTAGRHLLEKYAATHAGYG 324
BLAST of mRNA_H-elongata_contig15077.3381.1 vs. uniprot
Match: A0A7S0S1L0_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S1L0_9CHLO) HSP 1 Score: 201 bits (511), Expect = 7.530e-58 Identity = 91/192 (47.40%), Postives = 126/192 (65.62%), Query Frame = 1
Query: 1 NAWVLRRVMYRWKATMTEYFSTMHALAGRVTDLLAVSIGVDPAYFGGCFSESLSALRLIHYSSEVSDPEKGVFGTGQHSDFGMLTLLATDEVPGLQVLIRDEWIDVNPKPGAFICNVGDMFQRWTNDHLKSTVHRVVNKLGRERYSIAFFVAPNFDTKVACLPQFCSEDDPAKYPRTTCGMHLLEKFSRLHS 576
N W ++ ++AT Y + M AL R+ +LA+S+G+ PA+F F+ + LR +HY + SDP+ GVFG G H+D+G+LT LATDEVPGLQ+ W DV P+PG I N+GDM +RWTN +ST+HRVV + G+ERYS+A F PNF +V CLP C D P +YP TT G H+L+K++ H+
Sbjct: 133 NQWPREELVPGYRATAEAYLAAMMALGARMLRVLALSLGLPPAHFERHFTSPMVFLRPLHYDATRSDPDAGVFGAGAHTDYGLLTFLATDEVPGLQIHAGGAWRDVAPRPGCLIVNLGDMLERWTNGRYRSTLHRVVTRGGQERYSVACFYEPNFTARVECLPCCCGPDAPPRYPPTTAGQHILDKYASTHA 324 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15077.3381.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig15077.3381.1 >prot_H-elongata_contig15077.3381.1 ID=prot_H-elongata_contig15077.3381.1|Name=mRNA_H-elongata_contig15077.3381.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=192bp MYRWKATMTEYFSTMHALAGRVTDLLAVSIGVDPAYFGGCFSESLSALRLback to top mRNA from alignment at H-elongata_contig15077:2482..5664+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig15077.3381.1 ID=mRNA_H-elongata_contig15077.3381.1|Name=mRNA_H-elongata_contig15077.3381.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3183bp|location=Sequence derived from alignment at H-elongata_contig15077:2482..5664+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig15077:2482..5664+ >mRNA_H-elongata_contig15077.3381.1 ID=mRNA_H-elongata_contig15077.3381.1|Name=mRNA_H-elongata_contig15077.3381.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1152bp|location=Sequence derived from alignment at H-elongata_contig15077:2482..5664+ (Himanthalia elongata Himel1 dioecious)back to top |