mRNA_H-elongata_contig149528.3313.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig149528.3313.1 vs. uniprot
Match: D7FMA7_ECTSI (CRAL-TRIO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMA7_ECTSI) HSP 1 Score: 206 bits (525), Expect = 3.800e-64 Identity = 103/158 (65.19%), Postives = 121/158 (76.58%), Query Frame = 1
Query: 1 QLLVEETDELLVASFVAMRADIAGSPAWSGAPPPTDDFLLMFLRAEVFSPSRAADRYRKFWEAKVELFGEDGAALPIKAMDVKEALDLQFLQIIPGVKDVEGRQVMLITPGNNDKKMDIKLRVRAAWYVLLAALEDVETQRRGLCFVGLGNTARLSKV 474
QLL ET+EL++ S AMRA++ PAWS APPPTDDFLLMFLR+EVF P +AADRYRKFW+ KV L GED AA PIK D + LD +F QI+PG KD EGRQV+L+ G DK +D K+RVRA WYVLLAALEDVETQR+G CFV TAR+S+V
Sbjct: 25 QLLAIETEELVMGSLAAMRANLKKVPAWSRAPPPTDDFLLMFLRSEVFKPHKAADRYRKFWKVKVGLCGEDKAAFPIKVEDARLGLDREFCQIVPGSKDREGRQVVLVNTGQADKTLDRKMRVRAVWYVLLAALEDVETQRKGFCFVVTLKTARISQV 182
BLAST of mRNA_H-elongata_contig149528.3313.1 vs. uniprot
Match: D7FMA8_ECTSI (CRAL-TRIO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMA8_ECTSI) HSP 1 Score: 187 bits (474), Expect = 5.820e-57 Identity = 87/140 (62.14%), Postives = 112/140 (80.00%), Query Frame = 1
Query: 52 MRADIAGSPAWSGAPPPTDDFLLMFLRAEVFSPSRAADRYRKFWEAKVELFGEDGAALPIKAMDVKEALDLQFLQIIPGVKDVEGRQVMLITPGNNDKKMDIKLRVRAAWYVLLAALEDVETQRRGLCFVGLGNTARLSK 471
M+AD+A +PAWSGAP TD+FLLMFLRAEVFSPS AA+RYRKFW+AK+ L GE+ AALPIK D + AL+ +F+Q++PG +D+EGRQV++I N DK ++ +LR+ + WYVLLAALEDVETQRRG CFVG + S+
Sbjct: 1 MKADLAANPAWSGAPSQTDEFLLMFLRAEVFSPSAAANRYRKFWKAKITLCGEEKAALPIKFEDARAALESEFVQLVPGTRDIEGRQVVMIVSSNMDKTLERRLRLLSVWYVLLAALEDVETQRRGFCFVGYQKAVKRSQ 140
BLAST of mRNA_H-elongata_contig149528.3313.1 vs. uniprot
Match: A0A6V2CPB1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2CPB1_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 7.390e-21 Identity = 54/124 (43.55%), Postives = 77/124 (62.10%), Query Frame = 1
Query: 118 LMFLRAEVFSPSRAADRYRKFWEAKVELFGEDGAALPIKAM-----DVKEALDLQFLQIIPGVKDVEGRQVMLITPGNNDK-KMDIKLRVRAAWYVLLAALEDVETQRRGLCF-VGLGNTARLS 468
LMFLR+E+F AA+RY K+W ++ELFGE+ A PI ++ D + AL++ F++++ GV D GR +M I P N D K + VRA WY++ AALE Q++GL F V +GN LS
Sbjct: 131 LMFLRSELFDVQPAAERYAKYWNKRIELFGEEKACKPILSLNDALQDDESALNVGFIKLLDGVTDDRGRALMWIDPANLDSTKYSRESMVRAVWYIMHAALESETAQQKGLVFLVYIGNNPALS 254
BLAST of mRNA_H-elongata_contig149528.3313.1 vs. uniprot
Match: A0A7R9ZA46_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZA46_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 2.080e-16 Identity = 56/166 (33.73%), Postives = 84/166 (50.60%), Query Frame = 1
Query: 16 ETDELLVASFVAMRADIAGSP-----AWSGAPP--PT---DDFLLMFLRAEVFSPSRAADRYRKFWEAKVELFGEDGAALPIKAM----DVKEALDLQFLQIIPGVKDVEGRQVMLITPGNNDKKMDIKLRVRAAWYVLLAALEDVETQRRGLCFVGLGNTARLSK 471
E+ EL+ S V + ++ P W A P+ DD LMFLR + F RAA R ++W ++ELFGE+ A LP+ D +AL F++I + D GR+++ P D + D RA WYV+ AALED TQ+RG+ + A++ +
Sbjct: 67 ESPELIAGSLVRVEEELKSLPERVRNGWDEACERCPSLVGDDHKLMFLRCQGFHADRAALRLARYWNKRIELFGEERAFLPMTLKGALRDDIDALIFGFVRINSRMVDAHGRRIVFFDPSMLDHEYDRPSMNRATWYVVHAALEDEMTQKRGIVMIIYPQKAKMKQ 232
BLAST of mRNA_H-elongata_contig149528.3313.1 vs. uniprot
Match: A0A7S2A8V5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A8V5_TRICV) HSP 1 Score: 76.3 bits (186), Expect = 1.750e-13 Identity = 52/164 (31.71%), Postives = 81/164 (49.39%), Query Frame = 1
Query: 16 ETDELLVASFVAMRADIAGSPA-----WSGAPPPTDDFL-----LMFLRAEVFSPSRAADRYRKFWEAKVELFGEDGAALPIKA----MDVKEALDLQFLQIIPGVKDVEGRQVMLITPGNNDKKMDIKLRV-RAAWYVLLAALEDVETQRRGLCFVGLGNTAR 462
ET EL+ +S V + ++ P +S A D + L FLR EVF+ AA R K+W+ ++E+FGE+ A LP+ D A+ F++ + D R+V+ + P D + V R+ WY+ A LED TQ+RG+ FV + A+
Sbjct: 59 ETPELIASSLVRLEEELEKLPGEARVGYSRAVERCPDLVGEKDKLKFLRCEVFNADLAALRLTKYWDKRIEIFGEERAFLPMTLDGAFRDDVSAIKQGFMRCDDAMMDTNRRRVLFVDPSLLDHSKHERSSVCRSIWYITHAVLEDETTQKRGVVFVAYPHRAK 222
BLAST of mRNA_H-elongata_contig149528.3313.1 vs. uniprot
Match: A0A7S1UW18_9STRA (Hypothetical protein (Fragment) n=3 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UW18_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 2.210e-13 Identity = 58/158 (36.71%), Postives = 85/158 (53.80%), Query Frame = 1
Query: 7 LVEETDELLVASFVAMRADIAGSPAWSGAPPPT--------DDFLLMFLRAEVFSPSRAADRYRKFWEAKVELFGEDGA--ALPIKAMDVKE----ALDLQFLQIIPGVKDVEGRQVMLIT--PGNNDKKMDIKLRVRAAWYVLLAALEDVETQRRGL 432
L+EETD LL +S ++ ++A S T DDFLLMFLRA+ F+ AA R K+WE ++ LFG++ A PI+ D+ + L LQ++P +D GR ++L+T + + + DI R WY+ AALEDV QR G+
Sbjct: 65 LIEETDGLLHSSLDTLKRELAVSRCAEYNRAVTSCSEYVNSDDFLLMFLRADGFNVHGAAQRMEKYWEHRLRLFGDEVAFQPRPIRLTDLSDEDLATLRSTGLQLLPK-RDKAGRALILLTRRKWSFEDRKDIG---RLTWYLFHAALEDVGVQRSGV 218
BLAST of mRNA_H-elongata_contig149528.3313.1 vs. uniprot
Match: A0A7S1UTW5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UTW5_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 3.400e-13 Identity = 57/158 (36.08%), Postives = 86/158 (54.43%), Query Frame = 1
Query: 7 LVEETDELLVASFVAMRADIAGSPAWSGAPPPT--------DDFLLMFLRAEVFSPSRAADRYRKFWEAKVELFGEDGA--ALPIKAMDVKE----ALDLQFLQIIPGVKDVEGRQVMLIT--PGNNDKKMDIKLRVRAAWYVLLAALEDVETQRRGL 432
L++ETDELL +S A++ ++A S + T DDFLLMFLRA+ F+ A R K+W ++ LFG++ A PI+ D+ + L LQ++P +D GR ++L+T + + + DI R WY+ AALEDV QR G+
Sbjct: 46 LMKETDELLRSSLGALKKELAVSKSAEYNRAATFCPEYVKSDDFLLMFLRADRFNVQEVARRVEKYWGDRLRLFGDEVAFQPRPIRLTDLSDEDLATLRSTGLQLLPK-RDKAGRALILLTRRKWSFEDRKDIG---RLTWYLFHAALEDVGVQRSGV 199
BLAST of mRNA_H-elongata_contig149528.3313.1 vs. uniprot
Match: A0A7S2ELP7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ELP7_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 1.280e-12 Identity = 45/128 (35.16%), Postives = 72/128 (56.25%), Query Frame = 1
Query: 103 TDDFLLMFLRAEVFSPSRAADRYRKFWEAKVELFGE---DGAALPIKAMDVKEALDLQFLQIIPGVKDVEGRQVMLITPGNNDK-KMDIKLRVRAAWYVLLAALEDVETQRRGLCFVGL-GNTARLSK 471
+++ LMFLR+E+F+ AA RY K+W ++ELFG+ + L D AL F +++P K+ GR ++ + P D+ K + VRA +Y+ AALED TQ++G+ F+ GN R +
Sbjct: 67 SNEHKLMFLRSEMFNADLAAKRYAKYWNMRIELFGDKAFEQMTLDKALRDDGAALSNGFARLLPS-KEKAGRSIIWVDPSRLDETKYTRESMVRALFYIQTAALEDESTQKKGVIFMCYNGNNPRFEQ 193
BLAST of mRNA_H-elongata_contig149528.3313.1 vs. uniprot
Match: A0A7S2E7L7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E7L7_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 1.830e-12 Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = 1
Query: 103 TDDFLLMFLRAEVFSPSRAADRYRKFWEAKVELFGEDGAALPIKAMDV----KEALDLQFLQIIPGVKDVEGRQVMLITPGN-NDKKMDIKLRVRAAWYVLLAALEDVETQRRGLCFV 441
T + LMFLR++ F AA R+ +W ++ELFGE A P+ D KEAL+ F +++ DV GR ++ + P +D K +R WYV+ ALE+ ETQ+RG+ FV
Sbjct: 71 TKEHKLMFLRSDNFMVDLAAKRFANYWNKRIELFGEK-AFSPLTISDSLNNDKEALNTAFCKLLKAKDDV-GRSIIYMDPALLDDSKYTRDSMLRVIWYVVHVALEEKETQQRGIIFV 186
BLAST of mRNA_H-elongata_contig149528.3313.1 vs. uniprot
Match: A0A7S4QUR0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QUR0_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 9.680e-12 Identity = 35/80 (43.75%), Postives = 52/80 (65.00%), Query Frame = 1
Query: 118 LMFLRAEVFSPSRAADRYRKFWEAKVELFGEDGAALPIKAM-----DVKEALDLQFLQIIPGVKDVEGRQVMLITPGNND 342
LMFLR+E+F AA+RY K+W ++ELFGE+ A PI ++ D + AL++ F++++ GV D GR +M I P N D
Sbjct: 175 LMFLRSELFDVQPAAERYAKYWNKRIELFGEEKACKPILSLNDALQDDESALNVGFIKLLDGVTDDRGRALMWIDPANLD 254 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig149528.3313.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig149528.3313.1 >prot_H-elongata_contig149528.3313.1 ID=prot_H-elongata_contig149528.3313.1|Name=mRNA_H-elongata_contig149528.3313.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=158bp QLLVEETDELLVASFVAMRADIAGSPAWSGAPPPTDDFLLMFLRAEVFSPback to top mRNA from alignment at H-elongata_contig149528:256..1480- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig149528.3313.1 ID=mRNA_H-elongata_contig149528.3313.1|Name=mRNA_H-elongata_contig149528.3313.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1225bp|location=Sequence derived from alignment at H-elongata_contig149528:256..1480- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig149528:256..1480- >mRNA_H-elongata_contig149528.3313.1 ID=mRNA_H-elongata_contig149528.3313.1|Name=mRNA_H-elongata_contig149528.3313.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=948bp|location=Sequence derived from alignment at H-elongata_contig149528:256..1480- (Himanthalia elongata Himel1 dioecious)back to top |