prot_H-elongata_contig149528.3313.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig149528.3313.1
Unique Nameprot_H-elongata_contig149528.3313.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length158
Homology
BLAST of mRNA_H-elongata_contig149528.3313.1 vs. uniprot
Match: D7FMA7_ECTSI (CRAL-TRIO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMA7_ECTSI)

HSP 1 Score: 206 bits (525), Expect = 3.800e-64
Identity = 103/158 (65.19%), Postives = 121/158 (76.58%), Query Frame = 0
Query:    1 QLLVEETDELLVASFVAMRADIAGSPAWSGAPPPTDDFLLMFLRAEVFSPSRAADRYRKFWEAKVELFGEDGAALPIKAMDVKEALDLQFLQIIPGVKDVEGRQVMLITPGNNDKKMDIKLRVRAAWYVLLAALEDVETQRRGLCFVGLGNTARLSKV 158
            QLL  ET+EL++ S  AMRA++   PAWS APPPTDDFLLMFLR+EVF P +AADRYRKFW+ KV L GED AA PIK  D +  LD +F QI+PG KD EGRQV+L+  G  DK +D K+RVRA WYVLLAALEDVETQR+G CFV    TAR+S+V
Sbjct:   25 QLLAIETEELVMGSLAAMRANLKKVPAWSRAPPPTDDFLLMFLRSEVFKPHKAADRYRKFWKVKVGLCGEDKAAFPIKVEDARLGLDREFCQIVPGSKDREGRQVVLVNTGQADKTLDRKMRVRAVWYVLLAALEDVETQRKGFCFVVTLKTARISQV 182          
BLAST of mRNA_H-elongata_contig149528.3313.1 vs. uniprot
Match: D7FMA8_ECTSI (CRAL-TRIO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMA8_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 5.820e-57
Identity = 87/140 (62.14%), Postives = 112/140 (80.00%), Query Frame = 0
Query:   18 MRADIAGSPAWSGAPPPTDDFLLMFLRAEVFSPSRAADRYRKFWEAKVELFGEDGAALPIKAMDVKEALDLQFLQIIPGVKDVEGRQVMLITPGNNDKKMDIKLRVRAAWYVLLAALEDVETQRRGLCFVGLGNTARLSK 157
            M+AD+A +PAWSGAP  TD+FLLMFLRAEVFSPS AA+RYRKFW+AK+ L GE+ AALPIK  D + AL+ +F+Q++PG +D+EGRQV++I   N DK ++ +LR+ + WYVLLAALEDVETQRRG CFVG     + S+
Sbjct:    1 MKADLAANPAWSGAPSQTDEFLLMFLRAEVFSPSAAANRYRKFWKAKITLCGEEKAALPIKFEDARAALESEFVQLVPGTRDIEGRQVVMIVSSNMDKTLERRLRLLSVWYVLLAALEDVETQRRGFCFVGYQKAVKRSQ 140          
BLAST of mRNA_H-elongata_contig149528.3313.1 vs. uniprot
Match: A0A6V2CPB1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2CPB1_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 7.390e-21
Identity = 54/124 (43.55%), Postives = 77/124 (62.10%), Query Frame = 0
Query:   40 LMFLRAEVFSPSRAADRYRKFWEAKVELFGEDGAALPIKAM-----DVKEALDLQFLQIIPGVKDVEGRQVMLITPGNNDK-KMDIKLRVRAAWYVLLAALEDVETQRRGLCF-VGLGNTARLS 156
            LMFLR+E+F    AA+RY K+W  ++ELFGE+ A  PI ++     D + AL++ F++++ GV D  GR +M I P N D  K   +  VRA WY++ AALE    Q++GL F V +GN   LS
Sbjct:  131 LMFLRSELFDVQPAAERYAKYWNKRIELFGEEKACKPILSLNDALQDDESALNVGFIKLLDGVTDDRGRALMWIDPANLDSTKYSRESMVRAVWYIMHAALESETAQQKGLVFLVYIGNNPALS 254          
BLAST of mRNA_H-elongata_contig149528.3313.1 vs. uniprot
Match: A0A7R9ZA46_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZA46_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 2.080e-16
Identity = 56/166 (33.73%), Postives = 84/166 (50.60%), Query Frame = 0
Query:    6 ETDELLVASFVAMRADIAGSP-----AWSGAPP--PT---DDFLLMFLRAEVFSPSRAADRYRKFWEAKVELFGEDGAALPIKAM----DVKEALDLQFLQIIPGVKDVEGRQVMLITPGNNDKKMDIKLRVRAAWYVLLAALEDVETQRRGLCFVGLGNTARLSK 157
            E+ EL+  S V +  ++   P      W  A    P+   DD  LMFLR + F   RAA R  ++W  ++ELFGE+ A LP+       D  +AL   F++I   + D  GR+++   P   D + D     RA WYV+ AALED  TQ+RG+  +     A++ +
Sbjct:   67 ESPELIAGSLVRVEEELKSLPERVRNGWDEACERCPSLVGDDHKLMFLRCQGFHADRAALRLARYWNKRIELFGEERAFLPMTLKGALRDDIDALIFGFVRINSRMVDAHGRRIVFFDPSMLDHEYDRPSMNRATWYVVHAALEDEMTQKRGIVMIIYPQKAKMKQ 232          
BLAST of mRNA_H-elongata_contig149528.3313.1 vs. uniprot
Match: A0A7S2A8V5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A8V5_TRICV)

HSP 1 Score: 76.3 bits (186), Expect = 1.750e-13
Identity = 52/164 (31.71%), Postives = 81/164 (49.39%), Query Frame = 0
Query:    6 ETDELLVASFVAMRADIAGSPA-----WSGAPPPTDDFL-----LMFLRAEVFSPSRAADRYRKFWEAKVELFGEDGAALPIKA----MDVKEALDLQFLQIIPGVKDVEGRQVMLITPGNNDKKMDIKLRV-RAAWYVLLAALEDVETQRRGLCFVGLGNTAR 154
            ET EL+ +S V +  ++   P      +S A     D +     L FLR EVF+   AA R  K+W+ ++E+FGE+ A LP+       D   A+   F++    + D   R+V+ + P   D     +  V R+ WY+  A LED  TQ+RG+ FV   + A+
Sbjct:   59 ETPELIASSLVRLEEELEKLPGEARVGYSRAVERCPDLVGEKDKLKFLRCEVFNADLAALRLTKYWDKRIEIFGEERAFLPMTLDGAFRDDVSAIKQGFMRCDDAMMDTNRRRVLFVDPSLLDHSKHERSSVCRSIWYITHAVLEDETTQKRGVVFVAYPHRAK 222          
BLAST of mRNA_H-elongata_contig149528.3313.1 vs. uniprot
Match: A0A7S1UW18_9STRA (Hypothetical protein (Fragment) n=3 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UW18_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 2.210e-13
Identity = 58/158 (36.71%), Postives = 85/158 (53.80%), Query Frame = 0
Query:    3 LVEETDELLVASFVAMRADIAGSPAWSGAPPPT--------DDFLLMFLRAEVFSPSRAADRYRKFWEAKVELFGEDGA--ALPIKAMDVKE----ALDLQFLQIIPGVKDVEGRQVMLIT--PGNNDKKMDIKLRVRAAWYVLLAALEDVETQRRGL 144
            L+EETD LL +S   ++ ++A S         T        DDFLLMFLRA+ F+   AA R  K+WE ++ LFG++ A    PI+  D+ +     L    LQ++P  +D  GR ++L+T    + + + DI    R  WY+  AALEDV  QR G+
Sbjct:   65 LIEETDGLLHSSLDTLKRELAVSRCAEYNRAVTSCSEYVNSDDFLLMFLRADGFNVHGAAQRMEKYWEHRLRLFGDEVAFQPRPIRLTDLSDEDLATLRSTGLQLLPK-RDKAGRALILLTRRKWSFEDRKDIG---RLTWYLFHAALEDVGVQRSGV 218          
BLAST of mRNA_H-elongata_contig149528.3313.1 vs. uniprot
Match: A0A7S1UTW5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UTW5_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 3.400e-13
Identity = 57/158 (36.08%), Postives = 86/158 (54.43%), Query Frame = 0
Query:    3 LVEETDELLVASFVAMRADIAGSPAWSGAPPPT--------DDFLLMFLRAEVFSPSRAADRYRKFWEAKVELFGEDGA--ALPIKAMDVKE----ALDLQFLQIIPGVKDVEGRQVMLIT--PGNNDKKMDIKLRVRAAWYVLLAALEDVETQRRGL 144
            L++ETDELL +S  A++ ++A S +       T        DDFLLMFLRA+ F+    A R  K+W  ++ LFG++ A    PI+  D+ +     L    LQ++P  +D  GR ++L+T    + + + DI    R  WY+  AALEDV  QR G+
Sbjct:   46 LMKETDELLRSSLGALKKELAVSKSAEYNRAATFCPEYVKSDDFLLMFLRADRFNVQEVARRVEKYWGDRLRLFGDEVAFQPRPIRLTDLSDEDLATLRSTGLQLLPK-RDKAGRALILLTRRKWSFEDRKDIG---RLTWYLFHAALEDVGVQRSGV 199          
BLAST of mRNA_H-elongata_contig149528.3313.1 vs. uniprot
Match: A0A7S2ELP7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ELP7_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.280e-12
Identity = 45/128 (35.16%), Postives = 72/128 (56.25%), Query Frame = 0
Query:   35 TDDFLLMFLRAEVFSPSRAADRYRKFWEAKVELFGE---DGAALPIKAMDVKEALDLQFLQIIPGVKDVEGRQVMLITPGNNDK-KMDIKLRVRAAWYVLLAALEDVETQRRGLCFVGL-GNTARLSK 157
            +++  LMFLR+E+F+   AA RY K+W  ++ELFG+   +   L     D   AL   F +++P  K+  GR ++ + P   D+ K   +  VRA +Y+  AALED  TQ++G+ F+   GN  R  +
Sbjct:   67 SNEHKLMFLRSEMFNADLAAKRYAKYWNMRIELFGDKAFEQMTLDKALRDDGAALSNGFARLLPS-KEKAGRSIIWVDPSRLDETKYTRESMVRALFYIQTAALEDESTQKKGVIFMCYNGNNPRFEQ 193          
BLAST of mRNA_H-elongata_contig149528.3313.1 vs. uniprot
Match: A0A7S2E7L7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E7L7_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.830e-12
Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = 0
Query:   35 TDDFLLMFLRAEVFSPSRAADRYRKFWEAKVELFGEDGAALPIKAMDV----KEALDLQFLQIIPGVKDVEGRQVMLITPGN-NDKKMDIKLRVRAAWYVLLAALEDVETQRRGLCFV 147
            T +  LMFLR++ F    AA R+  +W  ++ELFGE  A  P+   D     KEAL+  F +++    DV GR ++ + P   +D K      +R  WYV+  ALE+ ETQ+RG+ FV
Sbjct:   71 TKEHKLMFLRSDNFMVDLAAKRFANYWNKRIELFGEK-AFSPLTISDSLNNDKEALNTAFCKLLKAKDDV-GRSIIYMDPALLDDSKYTRDSMLRVIWYVVHVALEEKETQQRGIIFV 186          
BLAST of mRNA_H-elongata_contig149528.3313.1 vs. uniprot
Match: A0A7S4QUR0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QUR0_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 9.680e-12
Identity = 35/80 (43.75%), Postives = 52/80 (65.00%), Query Frame = 0
Query:   40 LMFLRAEVFSPSRAADRYRKFWEAKVELFGEDGAALPIKAM-----DVKEALDLQFLQIIPGVKDVEGRQVMLITPGNND 114
            LMFLR+E+F    AA+RY K+W  ++ELFGE+ A  PI ++     D + AL++ F++++ GV D  GR +M I P N D
Sbjct:  175 LMFLRSELFDVQPAAERYAKYWNKRIELFGEEKACKPILSLNDALQDDESALNVGFIKLLDGVTDDRGRALMWIDPANLD 254          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig149528.3313.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D7FMA7_ECTSI3.800e-6465.19CRAL-TRIO domain-containing protein n=2 Tax=Ectoca... [more]
D7FMA8_ECTSI5.820e-5762.14CRAL-TRIO domain-containing protein n=2 Tax=Ectoca... [more]
A0A6V2CPB1_9STRA7.390e-2143.55Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7R9ZA46_9STRA2.080e-1633.73Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2A8V5_TRICV1.750e-1331.71Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S1UW18_9STRA2.210e-1336.71Hypothetical protein (Fragment) n=3 Tax=Grammatoph... [more]
A0A7S1UTW5_9STRA3.400e-1336.08Hypothetical protein (Fragment) n=2 Tax=Grammatoph... [more]
A0A7S2ELP7_9STRA1.280e-1235.16Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2E7L7_9STRA1.830e-1238.14Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4QUR0_9STRA9.680e-1243.75Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036865CRAL-TRIO lipid binding domain superfamilyGENE3D3.40.525.10coord: 75..156
e-value: 2.2E-6
score: 29.0
NoneNo IPR availablePANTHERPTHR10174RETINALDEHYDE BINDING PROTEIN-RELATEDcoord: 10..147
NoneNo IPR availablePANTHERPTHR10174:SF208CRAL-TRIO DOMAIN-CONTAINING PROTEIN DDB_G0278031coord: 10..147
IPR036273CRAL/TRIO, N-terminal domain superfamilySUPERFAMILY46938CRAL/TRIO N-terminal domaincoord: 5..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig149528contigH-elongata_contig149528:256..1480 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig149528.3313.1mRNA_H-elongata_contig149528.3313.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig149528 256..1480 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig149528.3313.1 ID=prot_H-elongata_contig149528.3313.1|Name=mRNA_H-elongata_contig149528.3313.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=158bp
QLLVEETDELLVASFVAMRADIAGSPAWSGAPPPTDDFLLMFLRAEVFSP
SRAADRYRKFWEAKVELFGEDGAALPIKAMDVKEALDLQFLQIIPGVKDV
EGRQVMLITPGNNDKKMDIKLRVRAAWYVLLAALEDVETQRRGLCFVGLG
NTARLSKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036865CRAL-TRIO_dom_sf
IPR036273CRAL/TRIO_N_dom_sf