mRNA_H-elongata_contig142132.2914.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig142132.2914.1 vs. uniprot
Match: A0A8F0FAZ7_9PHAE (Elongation factor Ts, mitochondrial n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAZ7_9PHAE) HSP 1 Score: 285 bits (730), Expect = 2.220e-96 Identity = 146/159 (91.82%), Postives = 154/159 (96.86%), Query Frame = 1
Query: 1 LRQKGLASADKNVNRKAIEGLVHSYIHTGGKIGVLVEVNCETDFVARREEFQELVQNIAMQIAASPDIRYINIEEIPEEVFLAEKEIELKKDDLNNKPENIREKIILGRVEKTLKNLSLLDQSFIRNPNITIEELVKEKISLFGENIKINRFTRYTLGN 477
LRQKGLASADK VNRKAIEGLV+SYIHTGGKIGVLVEVNCETDFVARREEFQEL QNIAMQIAASPDIRY+N++EIPEE+FL EKEIELKKDDLNNKP+NI+EKIILGRVEKTLK LSLLDQSFIRNPNITI+ELVKEKISLFGENIKI RFTRYTLGN
Sbjct: 42 LRQKGLASADKKVNRKAIEGLVNSYIHTGGKIGVLVEVNCETDFVARREEFQELAQNIAMQIAASPDIRYVNMDEIPEEIFLTEKEIELKKDDLNNKPDNIKEKIILGRVEKTLKTLSLLDQSFIRNPNITIDELVKEKISLFGENIKIKRFTRYTLGN 200
BLAST of mRNA_H-elongata_contig142132.2914.1 vs. uniprot
Match: A0A8F0JY19_9PHAE (Elongation factor Ts, mitochondrial n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0JY19_9PHAE) HSP 1 Score: 257 bits (657), Expect = 2.920e-85 Identity = 128/159 (80.50%), Postives = 149/159 (93.71%), Query Frame = 1
Query: 1 LRQKGLASADKNVNRKAIEGLVHSYIHTGGKIGVLVEVNCETDFVARREEFQELVQNIAMQIAASPDIRYINIEEIPEEVFLAEKEIELKKDDLNNKPENIREKIILGRVEKTLKNLSLLDQSFIRNPNITIEELVKEKISLFGENIKINRFTRYTLGN 477
LRQKGLA+ADK +RK IEG+V+SYIH GGKIGVLVEVNCETDFVARREEFQELVQNIAMQIAASPD+ Y+NI+++P+E+FLAEKE+E KDDL+NKPE ++EKIILGRVEKTLKNLSLL+QSFIRN NIT++EL+KEKISLFGENI+I RFTRYTLG+
Sbjct: 42 LRQKGLAAADKKADRKTIEGVVNSYIHAGGKIGVLVEVNCETDFVARREEFQELVQNIAMQIAASPDVLYVNIDDVPKELFLAEKEVESGKDDLSNKPEEMKEKIILGRVEKTLKNLSLLNQSFIRNQNITVDELIKEKISLFGENIRIKRFTRYTLGD 200
BLAST of mRNA_H-elongata_contig142132.2914.1 vs. uniprot
Match: A0A8F0JZ93_9PHAE (Elongation factor Ts, mitochondrial n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0JZ93_9PHAE) HSP 1 Score: 256 bits (654), Expect = 8.640e-85 Identity = 129/159 (81.13%), Postives = 147/159 (92.45%), Query Frame = 1
Query: 1 LRQKGLASADKNVNRKAIEGLVHSYIHTGGKIGVLVEVNCETDFVARREEFQELVQNIAMQIAASPDIRYINIEEIPEEVFLAEKEIELKKDDLNNKPENIREKIILGRVEKTLKNLSLLDQSFIRNPNITIEELVKEKISLFGENIKINRFTRYTLGN 477
LRQKGLA+ADK V+RK +EG+V+SYIH GGKIGVLVEVNCETDFVARREEFQELVQNIAMQIAASP++ Y+N EEIPE+VFLAEK IE +KDDL+NKP I+EKIILGRVEKTLK LSL+DQ+FIR+ NITI+EL+KEKISLFGENIK+ RFTRYTLGN
Sbjct: 42 LRQKGLAAADKKVDRKTVEGVVNSYIHAGGKIGVLVEVNCETDFVARREEFQELVQNIAMQIAASPEVLYVNSEEIPEQVFLAEKAIEAEKDDLSNKPPEIKEKIILGRVEKTLKKLSLIDQAFIRDANITIDELIKEKISLFGENIKVKRFTRYTLGN 200
BLAST of mRNA_H-elongata_contig142132.2914.1 vs. uniprot
Match: A0A0S0FB63_COSCS (Multifunctional fusion protein n=26 Tax=Laminariales TaxID=2886 RepID=A0A0S0FB63_COSCS) HSP 1 Score: 253 bits (647), Expect = 9.710e-84 Identity = 128/159 (80.50%), Postives = 147/159 (92.45%), Query Frame = 1
Query: 1 LRQKGLASADKNVNRKAIEGLVHSYIHTGGKIGVLVEVNCETDFVARREEFQELVQNIAMQIAASPDIRYINIEEIPEEVFLAEKEIELKKDDLNNKPENIREKIILGRVEKTLKNLSLLDQSFIRNPNITIEELVKEKISLFGENIKINRFTRYTLGN 477
LRQKGLA+ADK V+RK IEG+V+SYIH GGKIGVLVEVNCETDFVARREEFQELVQNIAMQIAASPD+ Y+N +IP+E+FLAEKEIE +K DL NKP+ I+EKIILGR+EKTLKNLSLLDQ+FIR+ NITI+EL+KEKI+LFGENIKI RFTRYTLG+
Sbjct: 42 LRQKGLAAADKKVDRKTIEGVVNSYIHAGGKIGVLVEVNCETDFVARREEFQELVQNIAMQIAASPDVLYVNTNDIPQELFLAEKEIESEKQDLINKPDEIKEKIILGRIEKTLKNLSLLDQAFIRDSNITIDELIKEKITLFGENIKIKRFTRYTLGS 200
BLAST of mRNA_H-elongata_contig142132.2914.1 vs. uniprot
Match: Q2PQH2_FUCVE (Multifunctional fusion protein n=3 Tax=Fucaceae TaxID=3010 RepID=Q2PQH2_FUCVE) HSP 1 Score: 253 bits (645), Expect = 1.960e-83 Identity = 128/159 (80.50%), Postives = 146/159 (91.82%), Query Frame = 1
Query: 1 LRQKGLASADKNVNRKAIEGLVHSYIHTGGKIGVLVEVNCETDFVARREEFQELVQNIAMQIAASPDIRYINIEEIPEEVFLAEKEIELKKDDLNNKPENIREKIILGRVEKTLKNLSLLDQSFIRNPNITIEELVKEKISLFGENIKINRFTRYTLGN 477
LRQKGLASADK V+RKAIEGLV+SYIHTGGKIGVLVEVNCETDFVARREEFQELV+NIAMQIAASP++ Y+ ++IPEE F AEKEIELKK+DL NKP +I ++IILGRV+KTLK LSL+DQ FIR+PNIT+EEL+KEKISLFGENIKI RFTRY LG+
Sbjct: 42 LRQKGLASADKKVDRKAIEGLVNSYIHTGGKIGVLVEVNCETDFVARREEFQELVKNIAMQIAASPEVLYVKTDDIPEETFFAEKEIELKKNDLINKPNDIEDQIILGRVQKTLKRLSLIDQQFIRDPNITVEELIKEKISLFGENIKIKRFTRYILGS 200
BLAST of mRNA_H-elongata_contig142132.2914.1 vs. uniprot
Match: A0A6B7EV40_9PHAE (Elongation factor Ts, mitochondrial n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EV40_9PHAE) HSP 1 Score: 249 bits (636), Expect = 4.440e-82 Identity = 125/159 (78.62%), Postives = 145/159 (91.19%), Query Frame = 1
Query: 1 LRQKGLASADKNVNRKAIEGLVHSYIHTGGKIGVLVEVNCETDFVARREEFQELVQNIAMQIAASPDIRYINIEEIPEEVFLAEKEIELKKDDLNNKPENIREKIILGRVEKTLKNLSLLDQSFIRNPNITIEELVKEKISLFGENIKINRFTRYTLGN 477
LR+KG ASA + +NRK IEGLV+SYIH GG+IGVL+EVNCETDFVARREEFQELVQ+IAMQ+AA PD+ YI EEIPE+VFLAEKEIE KDDLNNKP++I+EKIILGRVEKTLKNL+LLDQ FI++ NIT++EL+KEKISLFGENI+I RFTRYTLGN
Sbjct: 41 LREKGQASAHQKINRKTIEGLVNSYIHIGGRIGVLIEVNCETDFVARREEFQELVQDIAMQVAACPDVLYIKSEEIPEDVFLAEKEIESGKDDLNNKPDDIKEKIILGRVEKTLKNLTLLDQPFIKDTNITVDELIKEKISLFGENIRIKRFTRYTLGN 199
BLAST of mRNA_H-elongata_contig142132.2914.1 vs. uniprot
Match: A0A109QR64_9PHAE (Elongation factor Ts, mitochondrial n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A109QR64_9PHAE) HSP 1 Score: 245 bits (625), Expect = 2.170e-80 Identity = 124/158 (78.48%), Postives = 143/158 (90.51%), Query Frame = 1
Query: 1 LRQKGLASADKNVNRKAIEGLVHSYIHTGGKIGVLVEVNCETDFVARREEFQELVQNIAMQIAASPDIRYINIEEIPEEVFLAEKEIELKKDDLNNKPENIREKIILGRVEKTLKNLSLLDQSFIRNPNITIEELVKEKISLFGENIKINRFTRYTLG 474
LR+KGLASADK V+R EGLV SYIHTGGKIGVLVEVNCETDFVARREEFQELV+NIAMQIAASP++ YI ++++P+E+F +EKE+EL K+DL+NKPE I+ KIILGRVEKTLK LSL+DQ FIR+PNIT+EELVKEKISLFGENIKI RFTRY LG
Sbjct: 42 LRKKGLASADKKVDRNTSEGLVTSYIHTGGKIGVLVEVNCETDFVARREEFQELVKNIAMQIAASPEVLYIKMDDVPKEIFQSEKEMELNKNDLDNKPEEIKNKIILGRVEKTLKKLSLIDQPFIRDPNITVEELVKEKISLFGENIKIKRFTRYILG 199
BLAST of mRNA_H-elongata_contig142132.2914.1 vs. uniprot
Match: A0A8F0JXQ3_9PHAE (Elongation factor Ts, mitochondrial n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JXQ3_9PHAE) HSP 1 Score: 242 bits (617), Expect = 3.580e-79 Identity = 121/159 (76.10%), Postives = 139/159 (87.42%), Query Frame = 1
Query: 1 LRQKGLASADKNVNRKAIEGLVHSYIHTGGKIGVLVEVNCETDFVARREEFQELVQNIAMQIAASPDIRYINIEEIPEEVFLAEKEIELKKDDLNNKPENIREKIILGRVEKTLKNLSLLDQSFIRNPNITIEELVKEKISLFGENIKINRFTRYTLGN 477
LRQKGLA ADK NRK IEGL+HSYIHTG KIGVL+EVNCETDFVARREEF EL NIAMQIAASP++ Y+N ++IP+E F AE+EIELKK+DL NKP I+EKI+LGRVEKTLK LSLL+Q FIRNP+IT+EEL+KEKI+LFGENI+I RF RY LGN
Sbjct: 42 LRQKGLAFADKKSNRKVIEGLIHSYIHTGAKIGVLLEVNCETDFVARREEFHELANNIAMQIAASPEVIYVNFDDIPKEYFKAEREIELKKEDLFNKPNEIKEKIMLGRVEKTLKTLSLLNQQFIRNPSITVEELIKEKIALFGENIRIKRFIRYNLGN 200
BLAST of mRNA_H-elongata_contig142132.2914.1 vs. uniprot
Match: A0A7T8JK51_SCYLO (Multifunctional fusion protein n=2 Tax=Scytosiphon TaxID=27966 RepID=A0A7T8JK51_SCYLO) HSP 1 Score: 240 bits (613), Expect = 1.410e-78 Identity = 120/159 (75.47%), Postives = 143/159 (89.94%), Query Frame = 1
Query: 1 LRQKGLASADKNVNRKAIEGLVHSYIHTGGKIGVLVEVNCETDFVARREEFQELVQNIAMQIAASPDIRYINIEEIPEEVFLAEKEIELKKDDLNNKPENIREKIILGRVEKTLKNLSLLDQSFIRNPNITIEELVKEKISLFGENIKINRFTRYTLGN 477
LR+KG ASADK VNRK IEGLV+SYIH GG+IGVL+EVNCETDFVARREEFQELVQN+AMQIAASPD+ YI ++IPE++ EK IE K+DL+NKP++IREKIILGR++KTLKNL+LL+Q FIR+ NIT++EL+KEKISLFGENI+I RFTRYTLGN
Sbjct: 41 LREKGQASADKKVNRKTIEGLVNSYIHIGGRIGVLIEVNCETDFVARREEFQELVQNLAMQIAASPDVLYIQNDDIPEDIISNEKAIESGKEDLSNKPDDIREKIILGRIDKTLKNLTLLNQPFIRDANITVDELIKEKISLFGENIRIKRFTRYTLGN 199
BLAST of mRNA_H-elongata_contig142132.2914.1 vs. uniprot
Match: D1J791_ECTSI (Multifunctional fusion protein n=5 Tax=Ectocarpales TaxID=2877 RepID=D1J791_ECTSI) HSP 1 Score: 238 bits (606), Expect = 1.630e-77 Identity = 120/159 (75.47%), Postives = 142/159 (89.31%), Query Frame = 1
Query: 1 LRQKGLASADKNVNRKAIEGLVHSYIHTGGKIGVLVEVNCETDFVARREEFQELVQNIAMQIAASPDIRYINIEEIPEEVFLAEKEIELKKDDLNNKPENIREKIILGRVEKTLKNLSLLDQSFIRNPNITIEELVKEKISLFGENIKINRFTRYTLGN 477
LR+KG ASA + +NRK IEG+V+SYIH GGKIGVL+EVNCETDFVARREEFQELVQNIAMQIAASPD+ YI +IPEE+FL EK+IE +K+DL NKP+ I+EKIILGRVEKTLKNL+LL+Q IR+ +IT++EL+KEKISLFGENI+I RFTRYTLGN
Sbjct: 41 LREKGQASAHQKINRKTIEGIVNSYIHIGGKIGVLIEVNCETDFVARREEFQELVQNIAMQIAASPDVLYIQSSDIPEEIFLNEKKIESEKEDLINKPDEIKEKIILGRVEKTLKNLTLLNQPCIRDASITVDELIKEKISLFGENIRIKRFTRYTLGN 199 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig142132.2914.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig142132.2914.1 >prot_H-elongata_contig142132.2914.1 ID=prot_H-elongata_contig142132.2914.1|Name=mRNA_H-elongata_contig142132.2914.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=160bp LRQKGLASADKNVNRKAIEGLVHSYIHTGGKIGVLVEVNCETDFVARREEback to top mRNA from alignment at H-elongata_contig142132:1206..1685- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig142132.2914.1 ID=mRNA_H-elongata_contig142132.2914.1|Name=mRNA_H-elongata_contig142132.2914.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=480bp|location=Sequence derived from alignment at H-elongata_contig142132:1206..1685- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig142132:1206..1685- >mRNA_H-elongata_contig142132.2914.1 ID=mRNA_H-elongata_contig142132.2914.1|Name=mRNA_H-elongata_contig142132.2914.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=960bp|location=Sequence derived from alignment at H-elongata_contig142132:1206..1685- (Himanthalia elongata Himel1 dioecious)back to top |