mRNA_H-elongata_contig14097.2839.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig14097.2839.1
Unique NamemRNA_H-elongata_contig14097.2839.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig14097.2839.1 vs. uniprot
Match: D8LBD3_ECTSI (60S ribosome subunit biogenesis protein NIP7 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBD3_ECTSI)

HSP 1 Score: 350 bits (898), Expect = 6.430e-122
Identity = 168/180 (93.33%), Postives = 177/180 (98.33%), Query Frame = 1
Query:    1 MRPLTDDETKVLFEKLANYMGKNIEHLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRETLLSLGTCFGKFTKTGKFRLHITALDYVSQHAKFKVWVKPSAEMSFLYGNHVQKSGLGRITESTPLYGGVVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLRVEDDIL 540
            MRPLTDDETKVLFEKLANY+GKNIE LINRPDEKCCFRLHKDRVYYVSERLMRQATSVSR+TLLSLGTCFGKFTK+GKFRLHITALDY+SQ+AK+KVWVKPSAEMSFLYGNHVQKSGLGRITE+TP YGG VVYSMSDVPLGFGVAAQPTE+CKDLDPTAVVVLHQADVGEYLRVEDD+L
Sbjct:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITENTPKYGGAVVYSMSDVPLGFGVAAQPTEFCKDLDPTAVVVLHQADVGEYLRVEDDLL 180          
BLAST of mRNA_H-elongata_contig14097.2839.1 vs. uniprot
Match: A0A835ZB99_9STRA (60S ribosome subunit biogenesis protein NIP7 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB99_9STRA)

HSP 1 Score: 303 bits (777), Expect = 1.860e-103
Identity = 146/178 (82.02%), Postives = 160/178 (89.89%), Query Frame = 1
Query:    1 MRPLTDDETKVLFEKLANYMGKNIEHLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRETLLSLGTCFGKFTKTGKFRLHITALDYVSQHAKFKVWVKPSAEMSFLYGNHVQKSGLGRITESTPLYGGVVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLRVEDD 534
            MRPLTD+ET  LFEKLANY+GK+IE LINRPDE  CFRLHKDRVYYVSERLMRQ+T+VSR+ LLSLGTCFGKFTKT KFRL IT LDY+SQ+AK KVWVKP AEMSFLYGNHV KSGL RITE+TP Y GVVVYSM+D+P+GFGVAAQ TEYC+DLD  AVVVLHQAD+GEYLRVEDD
Sbjct:    1 MRPLTDEETATLFEKLANYIGKDIEKLINRPDEAYCFRLHKDRVYYVSERLMRQSTNVSRDNLLSLGTCFGKFTKTKKFRLGITCLDYISQYAKHKVWVKPGAEMSFLYGNHVAKSGLARITEATPQYAGVVVYSMNDIPMGFGVAAQATEYCRDLDAAAVVVLHQADIGEYLRVEDD 178          
BLAST of mRNA_H-elongata_contig14097.2839.1 vs. uniprot
Match: B5Y3S4_PHATC (60S ribosome subunit biogenesis protein NIP7 homolog n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y3S4_PHATC)

HSP 1 Score: 279 bits (713), Expect = 1.050e-93
Identity = 133/180 (73.89%), Postives = 157/180 (87.22%), Query Frame = 1
Query:    1 MRPLTDDETKVLFEKLANYMGKNIEHLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRETLLSLGTCFGKFTKTGKFRLHITALDYVSQHAKFKVWVKPSAEMSFLYGNHVQKSGLGRITESTPLYGGVVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLR-VEDDI 537
            MRPLT++ETK LF KL+ Y+GKNIE LINR DE+ CFRL KDR YY+SE +M+ ATS+ RE LL +GTC GKFTKTGKFRLHITAL+Y+SQ+AK+KVWVKPSAEMSFLYGNHV K+GL R+TE+TP Y GVVVYSMSD+PLGFGVAAQ TE+C+ LDPT  VVLHQAD+GEYLR +E+D+
Sbjct:    1 MRPLTEEETKSLFLKLSEYIGKNIERLINRSDERHCFRLIKDRCYYISESIMKSATSIGREHLLHVGTCMGKFTKTGKFRLHITALEYISQYAKYKVWVKPSAEMSFLYGNHVSKNGLARMTENTPQYSGVVVYSMSDIPLGFGVAAQSTEHCQQLDPTGNVVLHQADIGEYLRGLEEDM 180          
BLAST of mRNA_H-elongata_contig14097.2839.1 vs. uniprot
Match: A0A7S2S5A9_9STRA (60S ribosome subunit biogenesis protein NIP7 homolog n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S5A9_9STRA)

HSP 1 Score: 275 bits (702), Expect = 4.970e-92
Identity = 131/180 (72.78%), Postives = 157/180 (87.22%), Query Frame = 1
Query:    1 MRPLTDDETKVLFEKLANYMGKNIEHLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRETLLSLGTCFGKFTKTGKFRLHITALDYVSQHAKFKVWVKPSAEMSFLYGNHVQKSGLGRITESTPLYGGVVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLR-VEDDI 537
            MRPLT+DETK+LF+KLA Y+GK+IE +INR DE+ CFRL KDRVYYVSE  M+ + S+SR+ +L  GTC GKF+K+GKFRLH+TALDY+SQ+AK+KVWVKPSAEMSFLYGN++ KSGL RITESTP Y GVVVY+MSD+PLGFGV+AQ TE CKDL+P   VVLHQAD+GEYLR VEDD+
Sbjct:    1 MRPLTEDETKLLFQKLAEYIGKSIEQMINRKDERHCFRLMKDRVYYVSESAMKYSASISRDNILHFGTCLGKFSKSGKFRLHVTALDYLSQYAKYKVWVKPSAEMSFLYGNNILKSGLARITESTPQYAGVVVYNMSDLPLGFGVSAQNTEACKDLEPMGNVVLHQADIGEYLRGVEDDM 180          
BLAST of mRNA_H-elongata_contig14097.2839.1 vs. uniprot
Match: A0A6I9Z2T1_9SAUR (60S ribosome subunit biogenesis protein NIP7 homolog n=21 Tax=Sauria TaxID=32561 RepID=A0A6I9Z2T1_9SAUR)

HSP 1 Score: 273 bits (698), Expect = 1.950e-91
Identity = 127/179 (70.95%), Postives = 157/179 (87.71%), Query Frame = 1
Query:    1 MRPLTDDETKVLFEKLANYMGKNIEHLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRETLLSLGTCFGKFTKTGKFRLHITALDYVSQHAKFKVWVKPSAEMSFLYGNHVQKSGLGRITESTPLYGGVVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLRVEDDI 537
            MRPLT+DET+VLFEKLA Y+G+NI+ L++RPD   CFRLHKDRVYY+SERL++ AT++ R++L+SLGTCFGKFTKT KFRLHITALDY++ +AK+KVWVKP AE SFLYGNH+ KSGLGRITEST  Y GVVVYSM+DVPLGFGVAA+ T+ C+ +DP A+VV HQAD+GEY+R E+ +
Sbjct:    1 MRPLTEDETRVLFEKLARYVGENIQLLVDRPDGTYCFRLHKDRVYYLSERLLKLATNIPRDSLVSLGTCFGKFTKTQKFRLHITALDYLAPYAKYKVWVKPGAEQSFLYGNHLLKSGLGRITESTAQYQGVVVYSMADVPLGFGVAAKTTQECRKVDPMAIVVFHQADIGEYIRHEETL 179          
BLAST of mRNA_H-elongata_contig14097.2839.1 vs. uniprot
Match: A0A485KEQ5_9STRA (60S ribosome subunit biogenesis protein NIP7 homolog n=26 Tax=Oomycota TaxID=4762 RepID=A0A485KEQ5_9STRA)

HSP 1 Score: 273 bits (697), Expect = 2.770e-91
Identity = 129/179 (72.07%), Postives = 153/179 (85.47%), Query Frame = 1
Query:    1 MRPLTDDETKVLFEKLANYMGKNIEHLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRETLLSLGTCFGKFTKTGKFRLHITALDYVSQHAKFKVWVKPSAEMSFLYGNHVQKSGLGRITESTPLYGGVVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLRVEDDI 537
            MRPLTD+E K +FEK++ Y+G+N++HL+ RPDEK CFRLH D VYYVSE+LMRQAT++  E LLSLGT  GK TKT KF L IT LDY++Q+AK+KVW+KP++EMSFLYGN+V KSGLGRITE TP Y GVVVYSM+DVPLGFGVAAQ TE CKDL PT  VVLHQAD+GEYLRVED++
Sbjct:    1 MRPLTDEEMKTVFEKISKYIGRNVQHLVVRPDEKFCFRLHGDIVYYVSEKLMRQATNIGTEQLLSLGTAVGKLTKTKKFHLRITFLDYLAQYAKYKVWIKPNSEMSFLYGNNVVKSGLGRITEGTPQYAGVVVYSMNDVPLGFGVAAQATELCKDLAPTDYVVLHQADIGEYLRVEDEM 179          
BLAST of mRNA_H-elongata_contig14097.2839.1 vs. uniprot
Match: NIP7_XENTR (60S ribosome subunit biogenesis protein NIP7 homolog n=13 Tax=Sarcopterygii TaxID=8287 RepID=NIP7_XENTR)

HSP 1 Score: 271 bits (693), Expect = 1.130e-90
Identity = 125/179 (69.83%), Postives = 155/179 (86.59%), Query Frame = 1
Query:    1 MRPLTDDETKVLFEKLANYMGKNIEHLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRETLLSLGTCFGKFTKTGKFRLHITALDYVSQHAKFKVWVKPSAEMSFLYGNHVQKSGLGRITESTPLYGGVVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLRVEDDI 537
            MRPLTD+ETK +FEKL+ Y+G+NI+ L++RPD   CFRLH DRVYYVSER+++ AT+++R+ L+SLGTCFGKFTKT KFRLH+TALDY++ +AK+KVWVKP AE SFLYGNHV KSGLGRITE+T  Y GVVVYSM+D+PLGFGVAA+ T+ C+ LDP A+VV HQADVGEY+R ED +
Sbjct:    1 MRPLTDEETKAMFEKLSKYIGENIKLLVDRPDGTYCFRLHNDRVYYVSERILKLATNIARDKLVSLGTCFGKFTKTHKFRLHVTALDYLAPYAKYKVWVKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVYSMADIPLGFGVAAKSTQECRKLDPMAIVVFHQADVGEYIRHEDTL 179          
BLAST of mRNA_H-elongata_contig14097.2839.1 vs. uniprot
Match: H9G7K1_ANOCA (60S ribosome subunit biogenesis protein NIP7 homolog n=5 Tax=Bifurcata TaxID=1329961 RepID=H9G7K1_ANOCA)

HSP 1 Score: 271 bits (693), Expect = 1.130e-90
Identity = 127/179 (70.95%), Postives = 155/179 (86.59%), Query Frame = 1
Query:    1 MRPLTDDETKVLFEKLANYMGKNIEHLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRETLLSLGTCFGKFTKTGKFRLHITALDYVSQHAKFKVWVKPSAEMSFLYGNHVQKSGLGRITESTPLYGGVVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLRVEDDI 537
            MRPLT++ET+ LFEKL+ Y+G+NI+ LI RPD   CFRLHKDRVYY+SER+++ AT+V R+ L+SLGTCFGKFTKT KFRLHITALDY++ +AK+KVWVKPSAE SFLYGNHV KSGLGRITEST  Y GVVVYSM+DVPLGFGVAA+ T+ C+ +DP A+VV HQAD+GEY+R E+ +
Sbjct:    1 MRPLTEEETRALFEKLSKYIGENIQLLIERPDGAYCFRLHKDRVYYLSERILKLATNVPRQNLISLGTCFGKFTKTQKFRLHITALDYLAPYAKYKVWVKPSAEQSFLYGNHVLKSGLGRITESTSQYQGVVVYSMADVPLGFGVAAKSTQECRRMDPMAIVVFHQADIGEYIRHEETL 179          
BLAST of mRNA_H-elongata_contig14097.2839.1 vs. uniprot
Match: A0A8C4T854_ERPCA (60S ribosome subunit biogenesis protein NIP7 homolog n=2 Tax=Polypteridae TaxID=8289 RepID=A0A8C4T854_ERPCA)

HSP 1 Score: 270 bits (691), Expect = 2.270e-90
Identity = 125/179 (69.83%), Postives = 156/179 (87.15%), Query Frame = 1
Query:    1 MRPLTDDETKVLFEKLANYMGKNIEHLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRETLLSLGTCFGKFTKTGKFRLHITALDYVSQHAKFKVWVKPSAEMSFLYGNHVQKSGLGRITESTPLYGGVVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLRVEDDI 537
            MRPLTD+ETK LFEK++ Y+G+NI+ L++RPD   CFRLHKDRVYY+SE+L++ +T++SR+ L+S+GTCFGKFTKT KFRLH+TALDY++ +AK+KVWVKP AE SFLYGNHV KSGLGRITE+T  Y GVVVYSM+DVPLGFGVAA+ T+ C+ LDP A+VV HQAD+GEYLR ED +
Sbjct:    1 MRPLTDEETKALFEKVSKYIGENIKLLVDRPDGVYCFRLHKDRVYYLSEKLLKLSTNISRDKLISVGTCFGKFTKTMKFRLHVTALDYLAPYAKYKVWVKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVYSMADVPLGFGVAAKSTQDCRKLDPMAIVVFHQADIGEYLRSEDTL 179          
BLAST of mRNA_H-elongata_contig14097.2839.1 vs. uniprot
Match: A0A6U3ZD71_9STRA (60S ribosome subunit biogenesis protein NIP7 homolog n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZD71_9STRA)

HSP 1 Score: 270 bits (691), Expect = 2.350e-90
Identity = 127/180 (70.56%), Postives = 155/180 (86.11%), Query Frame = 1
Query:    1 MRPLTDDETKVLFEKLANYMGKNIEHLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRETLLSLGTCFGKFTKTGKFRLHITALDYVSQHAKFKVWVKPSAEMSFLYGNHVQKSGLGRITESTPLYGGVVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLR-VEDDI 537
            MRPLT++ETK LF KL  YMG+N+E LINR DE+ CFRL KDRVYYVSE++M+ +T++SR+ LL +GTC GKFTKTGKFRLHITAL+Y+SQ+ K+KVW+KPSAEMSFLYGNH+ KSG+ RITESTP Y GV+VY+  DVPLGFGVAAQ T+ C++L+P   VVLH+ADVGEYLR VEDD+
Sbjct:    1 MRPLTEEETKTLFTKLVEYMGRNVERLINREDERHCFRLVKDRVYYVSEKVMKASTTISRDDLLHVGTCLGKFTKTGKFRLHITALEYLSQYCKYKVWLKPSAEMSFLYGNHITKSGMARITESTPQYAGVIVYNAHDVPLGFGVAAQSTDKCRELEPMGNVVLHRADVGEYLRGVEDDM 180          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14097.2839.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBD3_ECTSI6.430e-12293.3360S ribosome subunit biogenesis protein NIP7 homol... [more]
A0A835ZB99_9STRA1.860e-10382.0260S ribosome subunit biogenesis protein NIP7 homol... [more]
B5Y3S4_PHATC1.050e-9373.8960S ribosome subunit biogenesis protein NIP7 homol... [more]
A0A7S2S5A9_9STRA4.970e-9272.7860S ribosome subunit biogenesis protein NIP7 homol... [more]
A0A6I9Z2T1_9SAUR1.950e-9170.9560S ribosome subunit biogenesis protein NIP7 homol... [more]
A0A485KEQ5_9STRA2.770e-9172.0760S ribosome subunit biogenesis protein NIP7 homol... [more]
NIP7_XENTR1.130e-9069.8360S ribosome subunit biogenesis protein NIP7 homol... [more]
H9G7K1_ANOCA1.130e-9070.9560S ribosome subunit biogenesis protein NIP7 homol... [more]
A0A8C4T854_ERPCA2.270e-9069.8360S ribosome subunit biogenesis protein NIP7 homol... [more]
A0A6U3ZD71_9STRA2.350e-9070.5660S ribosome subunit biogenesis protein NIP7 homol... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14097contigH-elongata_contig14097:4423..6490 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score352.1
Seed ortholog evalue1.6e-94
Seed eggNOG ortholog2880.D8LBD3
Preferred nameNIP7
KEGG koko:K07565
GOsGO:0000463,GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022607,GO:0022613,GO:0022618,GO:0030684,GO:0030687,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042273,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070013,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1902626,GO:1990904
EggNOG free text desc.ribosome assembly
EggNOG OGsCOG1374@1,KOG3492@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRibosome biogenesis factor, NIP7
Ec32 orthologEc-27_004360.1
Exons3
Model size543
Cds size543
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14097.2839.1prot_H-elongata_contig14097.2839.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig14097 4423..6490 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929837.5131805-CDS-H-elongata_contig14097:4422..46831622929837.5131805-CDS-H-elongata_contig14097:4422..4683Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14097 4423..4683 -
1691679177.7325087-CDS-H-elongata_contig14097:4422..46831691679177.7325087-CDS-H-elongata_contig14097:4422..4683Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14097 4423..4683 -
1622929837.5289698-CDS-H-elongata_contig14097:5756..58951622929837.5289698-CDS-H-elongata_contig14097:5756..5895Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14097 5757..5895 -
1691679177.744433-CDS-H-elongata_contig14097:5756..58951691679177.744433-CDS-H-elongata_contig14097:5756..5895Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14097 5757..5895 -
1622929837.5440974-CDS-H-elongata_contig14097:6347..64901622929837.5440974-CDS-H-elongata_contig14097:6347..6490Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14097 6348..6490 -
1691679177.7520473-CDS-H-elongata_contig14097:6347..64901691679177.7520473-CDS-H-elongata_contig14097:6347..6490Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14097 6348..6490 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig14097.2839.1

>prot_H-elongata_contig14097.2839.1 ID=prot_H-elongata_contig14097.2839.1|Name=mRNA_H-elongata_contig14097.2839.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=181bp
MRPLTDDETKVLFEKLANYMGKNIEHLINRPDEKCCFRLHKDRVYYVSER
LMRQATSVSRETLLSLGTCFGKFTKTGKFRLHITALDYVSQHAKFKVWVK
PSAEMSFLYGNHVQKSGLGRITESTPLYGGVVVYSMSDVPLGFGVAAQPT
EYCKDLDPTAVVVLHQADVGEYLRVEDDIL*
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mRNA from alignment at H-elongata_contig14097:4423..6490-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig14097.2839.1 ID=mRNA_H-elongata_contig14097.2839.1|Name=mRNA_H-elongata_contig14097.2839.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2068bp|location=Sequence derived from alignment at H-elongata_contig14097:4423..6490- (Himanthalia elongata Himel1 dioecious)
ATGAGACCGCTTACAGACGACGAAACCAAGGTTCTCTTCGAAAAGCTGGC CAATTACATGGGCAAGAACATCGAGCACCTCATCAATCGCCCCGACGAGA AGTGCTGTTTTCGACTACATAAGGACAGAGTATACTACGTCAGGTGCGAT TAGTACCTAGGCTCTGCCCGTGATGTCATCCGTGGTGAATAGCGCGCCTG GAGCACATTTTTCATGCATCAAGCGATGGGTGGTTCCTGCAATGTCGTGT GGATCCACCGTCCACACATTGTCCACGAAATTTGATAAGAGGGTTGCCCC TACAGTATTTTGAGAATAGTTCAAAAATTCAAACGTCTTGTATAGGAGCA TTATTTATATTTTGCCTTGAGGGTTGAGACGATCCTAAATACAACACACC GCTCTTCCTTTAGTAGGCAGCGGCTTCCTCCTAGATTACAGTACAGTATT CTCGAAATTTAACGTGGAAAAGCGGTACAGTATAGAGTTTTAGGTCCATT TACCGACGCACACGCGGTATTCATCAATAAAATAGGTATAATTTTGACCC GTGGCCTTGATCCCCTGCTTGATATCACCCTGTCTGCTGCACCAGCGAGA GATTAATGCGCCAGGCGACGAGCGTCAGCCGCGAGACGCTTCTTTCCTTG GGTACATGCTTCGGCAAGTTCACAAAAACGGGAAAGTTTCGGCTACACAT AACTGCCCTCGACTACGTATCTCAGCACGCCAAGGTACCCTGAATTTCTG GATTCCCAAGCAGCGTTTATCTCAAAACGTGGTTCAGCAGTGCATAGCGC GGAATCAATACGTTCTCGGTGTGAACACGGACCCTGCGCTATGATCCTCA GGCTTCGGTATTTCGACCTTCCGACGGATCCCCACCATATTCTTGTTCGA TCCCCACAAAAGCGCAATTTCTTATCGCTAGGGAACCAACCGTACCCTAG TATTATTCACACGGTCTTGTATGCTCCTTGGGAATACTGTACAAGTATCA TCAACTAAATATCTTCATCCACCCTCCATCCCCTGCAATAACCAAGTACC TCGTATAGTGTACTTCGCGTACCTCGTGTCGTCTAGAATTCTCCAGTGAT TCACGTTTTTCCAATAGCTACAATCCAAAATCAACCGAGATATATATTCG ATTCAATCATGTGCTCAACTTAACTACTGTATATCCTCTAAATAAAAGAT AAATAGTTTCTACGCTGTACTATTACTATTAATATTATCAACCCCTTCCC TATTTTAGGTCTAATCAACTTAGATCAACTCACCAACACTCTCTATACTC TGGTATGGAGTCATAGTCCACACATGACGTCATGATGAATTATGTCAGTG GGCGGGATAATGATGGGACCCTCGACATTACACCGTTAACCTGATGAATT TACTATTATTATTAATATTGGGGAACACGAATTATCAAATTTGTTGATTT TGTCCTCAAAGGTAGTTATGTACACATTCGAACCTGACGATAGTTGGTCC CCTGTATCTATCGGTGCTAAGAGGGTATGGATGTTCGGAGGGTTAGAATG AGTTCATATGTTTTGATATACAGTGGTATTATATTATTAGTATAACAACA ACAGAGGTACACCACCCCCAACATATCCAAGCCAGTGCGAGTACCGGTAG GGCCTTGCCCCCCCGACCTTGTGTTGATTATTCGCTTTTCCCAATAACGT ATATTTTTGCGCGCACTCTAGCCCCATTCACATCCCTACTCACACGTAAC GGTAACGTGCATACCTCTGCCTCATCCCACGCCGTTTCGTTTGCCCCCAC GAGGCAGTTCAAGGTTTGGGTAAAACCAAGCGCGGAGATGTCCTTCCTCT ACGGCAACCACGTGCAAAAATCTGGGCTGGGGCGAATAACAGAGAGCACT CCCTTGTATGGTGGGGTTGTGGTTTACAGCATGAGCGACGTGCCACTAGG CTTCGGGGTAGCAGCACAACCCACCGAATACTGTAAAGATCTCGACCCGA CCGCGGTAGTGGTGCTTCATCAGGCGGACGTCGGAGAGTATCTACGAGTA GAAGATGACATTTTGTAA
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Coding sequence (CDS) from alignment at H-elongata_contig14097:4423..6490-

>mRNA_H-elongata_contig14097.2839.1 ID=mRNA_H-elongata_contig14097.2839.1|Name=mRNA_H-elongata_contig14097.2839.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1086bp|location=Sequence derived from alignment at H-elongata_contig14097:4423..6490- (Himanthalia elongata Himel1 dioecious)
ATGAGACCGCTTACAGACGACGAAACCAAGGTTCTCTTCGAAAAGCTGGC
CAATTACATGGGCAAGAACATCGAGCACCTCATCAATCGCCCCGACGAGA
AGTGCTGTTTTCGACTACATAAGGACAGAGTATACTACGTCAGATGAGAC
CGCTTACAGACGACGAAACCAAGGTTCTCTTCGAAAAGCTGGCCAATTAC
ATGGGCAAGAACATCGAGCACCTCATCAATCGCCCCGACGAGAAGTGCTG
TTTTCGACTACATAAGGACAGAGTATACTACGTCAGCGAGAGATTAATGC
GCCAGGCGACGAGCGTCAGCCGCGAGACGCTTCTTTCCTTGGGTACATGC
TTCGGCAAGTTCACAAAAACGGGAAAGTTTCGGCTACACATAACTGCCCT
CGACTACGTATCTCAGCACGCCAAGCGAGAGATTAATGCGCCAGGCGACG
AGCGTCAGCCGCGAGACGCTTCTTTCCTTGGGTACATGCTTCGGCAAGTT
CACAAAAACGGGAAAGTTTCGGCTACACATAACTGCCCTCGACTACGTAT
CTCAGCACGCCAAGTTCAAGGTTTGGGTAAAACCAAGCGCGGAGATGTCC
TTCCTCTACGGCAACCACGTGCAAAAATCTGGGCTGGGGCGAATAACAGA
GAGCACTCCCTTGTATGGTGGGGTTGTGGTTTACAGCATGAGCGACGTGC
CACTAGGCTTCGGGGTAGCAGCACAACCCACCGAATACTGTAAAGATCTC
GACCCGACCGCGGTAGTGGTGCTTCATCAGGCGGACGTCGGAGAGTATCT
ACGAGTAGAAGATGACATTTTGTAATTCAAGGTTTGGGTAAAACCAAGCG
CGGAGATGTCCTTCCTCTACGGCAACCACGTGCAAAAATCTGGGCTGGGG
CGAATAACAGAGAGCACTCCCTTGTATGGTGGGGTTGTGGTTTACAGCAT
GAGCGACGTGCCACTAGGCTTCGGGGTAGCAGCACAACCCACCGAATACT
GTAAAGATCTCGACCCGACCGCGGTAGTGGTGCTTCATCAGGCGGACGTC
GGAGAGTATCTACGAGTAGAAGATGACATTTTGTAA
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