mRNA_H-elongata_contig13793.2659.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13793.2659.1 vs. uniprot
Match: D8LC91_ECTSI (PRF3, plastid translation release factor RF3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC91_ECTSI) HSP 1 Score: 988 bits (2553), Expect = 0.000e+0 Identity = 489/559 (87.48%), Postives = 519/559 (92.84%), Query Frame = 1
Query: 31 PDAPSTPSKGGQWAAAPLEINRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRADQRKATSDWMEMEKQRGISITSTVLSFDYEGNHINLLDTPGHQASTTAAAPDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKMDRPALNPFELLDQIEREFGMRMAPVLWPIGEGERFKGVLDRETSTVHLFERASRKSKATDVAELTLDDPQLPELITQELFEQLIEDAEMLDELVEPLDMERVLTGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRTG-ASTIAPDYNEFTGFIFKLQANLDPRHRDRLAYVRVVSGRYEKGMKVQHSRMK-KQVILSHAQQLFAQERETVQVAYPGDVIGINNPGHFAIGDTIFTGSTKIRFPGIPSFSPECFTYMRNPNPSKYKNYRKGLDQLLDEGAVQVLRERNDDGNGNPILAAVGTLQFDVVQHRMKDEYGVDTILEPLPGYKTARWAEGGWDAINEATKAGKLFGIFFAQDKFGRPVLLFRNEWKLANIQEELPQLELVPWSHPPDV 1701
P AP+T SKGGQWAA P EI+RRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSR+DQRKATSDWME+EKQRGISITSTVLSF+Y+GNHINLLDTPGHQ DFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNK+DRP+L+PFELLDQIEREFGM+MAPVLWPIG+GE FKGVLDR+T TVHLFERA R KATD+ EL L DP+LPELIT+EL EQL+ED EMLDELVEPLDMERVLTGEQSPMFFGSAMTNFGVELFLKRFLTIGQKP+SRR G A I P YNEFTGF+FKLQANLDPRHRDRLAYVRVVSGRYEKGMKVQHSRMK KQV L+HAQQLFAQERETV AYPGDVIGINNPGHFAIGDTIFTGS KIRFPGIPSFSPECF YMRNPNPSKYKNYRKGLDQLLDEGAVQ+LRER+DDGNGNPILAAVGTLQFDVVQHRMK EYGVDTILEPL GY TARWAEGGW++I+EATKAGKLFG+F AQD+FGRPVLLFRNEWKLAN+Q +LPQLEL+PWS PPD+
Sbjct: 80 PVAPTTTSKGGQWAATPFEIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEYDGNHINLLDTPGHQ--------DFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGEEFKGVLDRDTKTVHLFERAGRTKKATDMPELDLHDPKLPELITEELHEQLLEDVEMLDELVEPLDMERVLTGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPSSRRMGNADVILPGYNEFTGFVFKLQANLDPRHRDRLAYVRVVSGRYEKGMKVQHSRMKGKQVTLAHAQQLFAQERETVLAAYPGDVIGINNPGHFAIGDTIFTGSNKIRFPGIPSFSPECFAYMRNPNPSKYKNYRKGLDQLLDEGAVQMLRERSDDGNGNPILAAVGTLQFDVVQHRMKAEYGVDTILEPLSGYNTARWAEGGWESIDEATKAGKLFGVFTAQDRFGRPVLLFRNEWKLANVQGDLPQLELIPWSRPPDI 630
BLAST of mRNA_H-elongata_contig13793.2659.1 vs. uniprot
Match: A0A836C6V6_9STRA (PRF3, plastid translation release factor RF3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6V6_9STRA) HSP 1 Score: 830 bits (2145), Expect = 3.090e-298 Identity = 409/554 (73.83%), Postives = 467/554 (84.30%), Query Frame = 1
Query: 58 GGQWAAAPLEINRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRADQRKATSDWMEMEKQRGISITSTVLSFDYEGNHINLLDTPGHQASTTAAAPDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKMDRPALNPFELLDQIEREFGMRMAPVLWPIGEGERFKGVLDRETSTVHLFERASRKSKATDVAELTLDDPQLPELITQELFEQLIEDAEMLDELVEPLDMERVLTGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRR-----TGASTIAPDYNEFTGFIFKLQANLDPRHRDRLAYVRVVSGRYEKGMKVQHSRMKKQVI-LSHAQQLFAQERETVQVAYPGDVIGINNPGHFAIGDTIFTGSTKIRFPGIPSFSPECFTYMRNPNPSKYKNYRKGLDQLLDEGAVQVLRERNDDGNGNPILAAVGTLQFDVVQHRMKDEYGVDTILEPLPGYKTARWAEGGWDAINEATKAGKLFGIFFAQDKFGRPVLLFRNEWKLANIQEELPQLELVPWSHPPDV 1701
G QWAA EI RRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRADQRKATSDWME+EKQRGISITSTVLSF+Y G INLLDTPGHQ DFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVC+LR LPIFTF NK+DRP+L+PFELLDQIE +FG++M PVLWPIG+G F+GVLDR+T+ VHLFER R +A ++ L LDDP+LP I + L+ QL ED E+L+ L+EPLDM +V GEQSPMFFGSAM NFGVELFLKRFLT+GQ PA R A + P+Y EFTGF FKLQANLDPRHRDRLAY+RVVSGR+EKGM+V HSRMK + + L+ AQQLFAQ+RE+V A+PGDVIG+NNPG FAIGDTI+TG+ ++ FPGIPSFSPECF Y+RNPNPS YKNY KGL QLLDEGAVQ+LRER+DDGNG+PILAAVGTLQFDVVQ+R+KDEYGV+T LE LPG+ TARW+ GWDA++ A GKLFGIF A+D+FGRPVLLFRNEWKL + +LP+LELVPW+ PPD+
Sbjct: 69 GAQWAAPAAEIARRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRADQRKATSDWMELEKQRGISITSTVLSFEYAGAQINLLDTPGHQ--------DFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCRLRGLPIFTFCNKLDRPSLSPFELLDQIEGDFGLQMVPVLWPIGDGPNFQGVLDRDTNLVHLFERGDRTGRAKEMGTLELDDPELPIAIGETLYNQLREDVEVLEGLIEPLDMAKVHAGEQSPMFFGSAMVNFGVELFLKRFLTLGQGPAPRSISSGGNAAEQLTPEYPEFTGFCFKLQANLDPRHRDRLAYIRVVSGRFEKGMRVSHSRMKGRTVNLTQAQQLFAQDRESVSEAFPGDVIGLNNPGVFAIGDTIYTGARRVAFPGIPSFSPECFAYIRNPNPSTYKNYNKGLTQLLDEGAVQLLRERSDDGNGSPILAAVGTLQFDVVQYRLKDEYGVETRLEALPGFNTARWSNAGWDAVDAAEADGKLFGIFQAKDRFGRPVLLFRNEWKLQQVMADLPELELVPWAAPPDI 614
BLAST of mRNA_H-elongata_contig13793.2659.1 vs. uniprot
Match: A0A6S9HEF4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9HEF4_HETAK) HSP 1 Score: 802 bits (2071), Expect = 2.960e-287 Identity = 389/547 (71.12%), Postives = 465/547 (85.01%), Query Frame = 1
Query: 67 WAAAPLEINRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRADQRKATSDWMEMEKQRGISITSTVLSFDYEGNHINLLDTPGHQASTTAAAPDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKMDRPALNPFELLDQIEREFGMRMAPVLWPIGEGERFKGVLDRETSTVHLFERASRKSKATDVAELTLDDPQLPELI-TQELFEQLIEDAEMLDELVEPLDMERVLTGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRTGASTIAPDYNEFTGFIFKLQANLDPRHRDRLAYVRVVSGRYEKGMKVQHSRMKKQVILSHAQQLFAQERETVQVAYPGDVIGINNPGHFAIGDTIFTGSTKIRFPGIPSFSPECFTYMRNPNPSKYKNYRKGLDQLLDEGAVQVLRERNDDGNGNPILAAVGTLQFDVVQHRMKDEYGVDTILEPLPGYKTARWAEGGWDAINEATKAGKLFGIFFAQDKFGRPVLLFRNEWKLANIQEELPQLELVPWSHPPDVE 1704
+AA E+ RRRNFAIISHPDAGKTT+TEKLLLYGGAIQ+AGAV++RA QRKATSDWME+EKQRGISITSTVLSF+Y+G+ INLLDTPGHQ DFSEDTYRTLAAADN+VMLVDAAKGLEPQT+KLFEVC+LR LPIFTF NKMDRPAL+PF+L+DQIE EFG++M PV+WPIG G+RFKGVL+R++ ++LFE+ R KA + + LDDP L ++ +LF+QL+ED EMLD L EPLDM RVL GEQSPMFFGSAMTNFGVE+FL+RFLT+GQ P +R T A +AP + EFTGF+FKLQANLDP+HRDRLAYVRV SG++EKGMKV HSR KK V LS AQ LFA +RETV+ AYPGD+IG+NNPG FAIGDTI+TG+ +++PGIPSFSPECF+Y+RNPNPSKYKNYRKGLDQL++EGAVQ+LR DDGNGNPILAAVGTLQFDVVQ+R++DEYGV+TILEP+ GY ARWAE W+ I E T +GKLFG+F A+D++ RPVLLF+NEWKL ++ ++ P L+LVPW+ P+ E
Sbjct: 61 YAAPEKEVIRRRNFAIISHPDAGKTTMTEKLLLYGGAIQDAGAVKTRASQRKATSDWMELEKQRGISITSTVLSFEYDGHAINLLDTPGHQ--------DFSEDTYRTLAAADNSVMLVDAAKGLEPQTKKLFEVCRLRGLPIFTFCNKMDRPALSPFDLVDQIEGEFGLQMCPVVWPIGNGDRFKGVLERDSGLIYLFEKGQRGKKAEETT-VRLDDPGLRGILGDDQLFDQLMEDVEMLDGLFEPLDMARVLAGEQSPMFFGSAMTNFGVEVFLRRFLTLGQAPPARTTAAGPLAPTHPEFTGFVFKLQANLDPKHRDRLAYVRVCSGKFEKGMKVTHSRTKKNVNLSAAQALFASDRETVETAYPGDIIGLNNPGVFAIGDTIYTGNQPVKYPGIPSFSPECFSYIRNPNPSKYKNYRKGLDQLMEEGAVQLLRAYGDDGNGNPILAAVGTLQFDVVQYRLQDEYGVETILEPVGGYSIARWAENSWEEIKEETASGKLFGVFLAKDQYERPVLLFKNEWKLNSVVQDCPDLKLVPWAMAPEYE 598
BLAST of mRNA_H-elongata_contig13793.2659.1 vs. uniprot
Match: B5YM78_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YM78_THAPS) HSP 1 Score: 727 bits (1876), Expect = 2.420e-257 Identity = 366/568 (64.44%), Postives = 448/568 (78.87%), Query Frame = 1
Query: 73 AAPL-EINRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRADQRKATSDWMEMEKQRGISITSTVLSFDYEGNHINLLDTPGHQASTTAAAPDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKMDRPALNPFELLDQIEREFGMRMAPVLWPIGEGERFKGVLDRETSTVHLFERASRKSKATDVAELTLDD-PQLPELITQ-ELFEQLIEDAEMLDELVEPLDMERVLTGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRT----------------------GASTIAPDYNEFTGFIFKLQANLDPRHRDRLAYVRVVSGRYEKGMKVQHSRMK--KQVILSHAQQLFAQERETVQVAYPGDVIGINNPGHFAIGDTIFTGSTKIRFPGIPSFSPECFTYMRNPNPSKYKNYRKGLDQLLDEGAVQVLRERNDDGNGNPILAAVGTLQFDVVQHRMKDEYGVDTILEPLPGYKTARWAEGGWDAINEATKAGKLFGIFFAQDKFGRPVLLFRNEWKLANIQEELPQLELVPWSHPP 1695
+APL EINRRRN AIISHPD+GKTT+TEKLLLYGGA+Q+AGAVR + +QR SD+MEME+QRGISI++TV+SFDY HIN+LDTPGHQ DFSEDTYR LAAADNAVML+DAAKGLEPQTRKLFEVC++R+LP+FTFVNKMDRPAL P+E++DQIE EFG+ P+LWPIG+GERFKGVLDR + VHLF+RA R SK+ +V ++++ D L E I ELF++L+ED E+L+EL+ PLDMERV+ GEQSP+FFGSAMTNFGV+LFL +F +G KP+ R G I P+Y +FTGF+FK QANLDP+HRDRLAY+R+VSG ++KGMKV HSR K K+ L+ AQ LF +RE+V+VAYPGDVIGINNPG+FAIGDT+FTG++KI FPGIPSFSPE F Y+R+PNPS YK + KG+DQLL EGAVQ LR+RNDDG G ILAAVG LQF+VVQ R+K EYGVD+ +EP+P + ARWA+GGWDA+++A K GKLFG+ QD++ RPVLLFRN+WK A++ EE LEL PWS PP
Sbjct: 56 SAPLTEINRRRNLAIISHPDSGKTTMTEKLLLYGGALQQAGAVRMKGEQRGTQSDFMEMERQRGISISATVMSFDYNALHINILDTPGHQ--------DFSEDTYRALAAADNAVMLLDAAKGLEPQTRKLFEVCRMRQLPLFTFVNKMDRPALTPYEIMDQIEAEFGLETHPILWPIGDGERFKGVLDRLENMVHLFDRAERGSKS-EVRQVSMSDLDTLKECINDDELFDKLLEDQELLEELINPLDMERVIAGEQSPLFFGSAMTNFGVQLFLDKFCAMGTKPSGRLAKRMDEVKGKKAKEAASSIDDDEGDELIGPEYEDFTGFVFKTQANLDPKHRDRLAYIRIVSGSFQKGMKVGHSRSKPGKKYNLAQAQTLFGSDRESVEVAYPGDVIGINNPGNFAIGDTLFTGNSKIAFPGIPSFSPEVFGYIRSPNPSSYKAFAKGIDQLLAEGAVQALRQRNDDGGGPLILAAVGQLQFEVVQARLKSEYGVDSDMEPIP-FTLARWADGGWDAVDKADKDGKLFGLMILQDRWKRPVLLFRNDWKAASVTEEEKYLELKPWSKPP 613
BLAST of mRNA_H-elongata_contig13793.2659.1 vs. uniprot
Match: B7G1B1_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G1B1_PHATC) HSP 1 Score: 726 bits (1873), Expect = 1.310e-256 Identity = 355/563 (63.06%), Postives = 447/563 (79.40%), Query Frame = 1
Query: 46 TPSKGGQWAAAPLEINRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRADQRKATSDWMEMEKQRGISITSTVLSFDYEGNHINLLDTPGHQASTTAAAPDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKMDRPALNPFELLDQIEREFGMRMAPVLWPIGEGERFKGVLDRETSTVHLFERASRKSKATDVAELTLDDPQLPE--LITQELFEQLIEDAEMLDELVEPLDMERVLTGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRTGAST------IAPDYNEFTGFIFKLQANLDPRHRDRLAYVRVVSGRYEKGMKVQHSRMK--KQVILSHAQQLFAQERETVQVAYPGDVIGINNPGHFAIGDTIFTGSTKIRFPGIPSFSPECFTYMRNPNPSKYKNYRKGLDQLLDEGAVQVLRERNDDGNGNPILAAVGTLQFDVVQHRMKDEYGVDTILEPLPGYKTARWAEGGWDAINEATKAGKLFGIFFAQDKFGRPVLLFRNEWKLANIQEELPQLELVPWSHPPDVE 1704
TP + A +EI+RRRN AIISHPD+GKTT+TEKLLLYGGA+Q+AGAVR +A+QR SD+MEME++RGISI+STV++F+Y+ I L+DTPGHQ DFSEDTYR LAAADNA+ML+DAAKGLEPQTRKLFEVC++R LP+FTF NKMDRPAL+P+E++DQIE EFG+ P+LWPIG+G+RFKGVLDR T+ VHL+++A ++ V E+ L+D + + +ELF +L+EDAE+L+EL+ PLDMERV+ GEQSP+FFGSAMTNFGV+LFL +F ++G KP R + I P++ EFTGFIFK QANLDP+HRDRLAYVRVVSGRYEKGMKV HSR K K+ L+ AQ LF +R +++VAYPGDVIGINNPG+FAIGDT+FTG ++ FPGIPSFSPE F Y+R+PNPS YK++RKG+DQLLDEGAVQ LR+RNDDG G +LAAVG LQF+VVQ R+K+EY V++I+EPL Y ARW +GGW+A+ +A GKLFGI QD++GRPVLLFRN+WK A++ EE L+L PWS PP ++
Sbjct: 80 TPPVSTNYQAPQIEIDRRRNLAIISHPDSGKTTMTEKLLLYGGALQQAGAVRQKAEQRATQSDFMEMEQERGISISSTVMNFEYQDFGIRLMDTPGHQ--------DFSEDTYRALAAADNALMLLDAAKGLEPQTRKLFEVCRMRRLPLFTFCNKMDRPALSPYEIMDQIEDEFGLETHPILWPIGDGDRFKGVLDRTTNVVHLYQKAEKRGGKAGVQEVPLEDTVTLKATIDDEELFHKLLEDAELLEELINPLDMERVMKGEQSPLFFGSAMTNFGVQLFLDKFCSMGTKPMGRMADTKSENEEEMIGPNHEEFTGFIFKTQANLDPKHRDRLAYVRVVSGRYEKGMKVSHSRSKSGKKYNLAQAQALFGSDRSSIEVAYPGDVIGINNPGNFAIGDTLFTGGARVAFPGIPSFSPEKFAYIRSPNPSDYKSFRKGIDQLLDEGAVQALRQRNDDGGGPLMLAAVGQLQFEVVQARLKNEYNVESIMEPL-NYSLARWVDGGWEAVEKADADGKLFGIMICQDRWGRPVLLFRNDWKAASVAEEEKYLDLKPWSTPPIID 633
BLAST of mRNA_H-elongata_contig13793.2659.1 vs. uniprot
Match: A0A7S2L692_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L692_9STRA) HSP 1 Score: 718 bits (1853), Expect = 8.990e-254 Identity = 363/571 (63.57%), Postives = 442/571 (77.41%), Query Frame = 1
Query: 67 WAAAPLEINRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRADQRKATSDWMEMEKQRGISITSTVLSFDYEGNHINLLDTPGHQASTTAAAPDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKMDRPALNPFELLDQIEREFGMRMAPVLWPIGEGERFKGVLDRETSTVHLFERASRKSKATDVAELTLDDPQL--PELITQELFEQLIEDAEMLDELVEPLDMERVLTGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASR----------RTGAST-----------IAPDYNEFTGFIFKLQANLDPRHRDRLAYVRVVSGRYEKGMKVQHSRMK--KQVILSHAQQLFAQERETVQVAYPGDVIGINNPGHFAIGDTIFTGSTKIRFPGIPSFSPECFTYMRNPNPSKYKNYRKGLDQLLDEGAVQVLRERNDDGNGNPILAAVGTLQFDVVQHRMKDEYGVDTILEPLPGYKTARWAEGGWDAINEATKAGKLFGIFFAQDKFGRPVLLFRNEWKLANIQEELPQLELVPWSHPPDVE 1704
+AA P EINRRRN AIISHPD+GKTT+TEKLLLYGGA+Q+AGAVR + +QR SD+MEMEKQRGISI+STV+SF+Y +N+LDTPGHQ DFSEDTYR LAAADNAVML+DAAKGLEPQTRKLFEV ++R LP+FTFVNKMDRPAL+P E++DQIE+EFG+ P++WPIG+GERFKGVLDR + VHLF + RKSKA +V + + D + + QELF++L+ED E+LDEL+ PLDM+RV+ G+QSP+FFGSAMTNFGV+LFL +F +G KP R + GA + + PD+ EFTGF+FK QANLDP+HRDRLAY+R+VSG ++KGMKV HSR K K+ L+ AQ LF +RE+V+VAYPGDVIGINNPG FAIGDT++TG+ K+ FPGIPSFSPE F Y+RNPNPS YK++ KG+DQLL EGAVQ LR+RNDDG G ILAAVG LQF+VVQ R+K EY VD+ LEP+ GY ARWAEGGWDA+++A GKLFGI QD++GRPVLLFRN+WK + EE LEL PWS PP E
Sbjct: 61 FAAPPKEINRRRNLAIISHPDSGKTTMTEKLLLYGGALQQAGAVRMKGEQRATQSDFMEMEKQRGISISSTVMSFEYNDLCVNILDTPGHQ--------DFSEDTYRALAAADNAVMLLDAAKGLEPQTRKLFEVTRMRNLPLFTFVNKMDRPALDPSEIMDQIEQEFGLETYPIVWPIGDGERFKGVLDRMDNVVHLFGKGDRKSKA-EVETVPMSDLETLKARIDDQELFDKLMEDIEILDELIAPLDMDRVIAGDQSPLFFGSAMTNFGVQLFLDKFCDMGVKPLGRLAKVVEEGKGKKGAQSKLDQDDEPNDLVNPDFGEFTGFVFKTQANLDPKHRDRLAYIRIVSGAFQKGMKVGHSRSKPGKKFNLAQAQTLFGSDRESVEVAYPGDVIGINNPGDFAIGDTLYTGNQKVAFPGIPSFSPEIFAYIRNPNPSSYKSFTKGIDQLLAEGAVQALRQRNDDGGGPLILAAVGQLQFEVVQARLKGEYNVDSDLEPI-GYTLARWAEGGWDAVDKADADGKLFGIMIVQDRWGRPVLLFRNDWKATGVAEEEKYLELKPWSKPPMFE 621
BLAST of mRNA_H-elongata_contig13793.2659.1 vs. uniprot
Match: A0A7S2FZH2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FZH2_9STRA) HSP 1 Score: 716 bits (1849), Expect = 2.460e-253 Identity = 361/556 (64.93%), Postives = 431/556 (77.52%), Query Frame = 1
Query: 85 EINRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRADQRKATSDWMEMEKQRGISITSTVLSFDYEGNHINLLDTPGHQASTTAAAPDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKMDRPALNPFELLDQIEREFGMRMAPVLWPIGEGERFKGVLDRETSTVHLFERASRKSKATDVAELTLDDPQ-LPELITQELFEQLIEDAEMLDELVEPLDMERVLTGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRTGASTIAP---------------DYNEFTGFIFKLQANLDPRHRDRLAYVRVVSGRYEKGMKVQHSRMKKQVILSHAQQLFAQERETVQVAYPGDVIGINNPGHF-AIGDTIFTGSTKIRFPGIPSFSPECFTYMRNPNPSKYKNYRKGLDQLLDEGAVQVLRERNDDGNGNPILAAVGTLQFDVVQHRMKDEYGVDTILEPLPGYKTARWAEGGWDAINEATKAGKLFGIFFAQDKFGRPVLLFRNEWKLANIQEELPQLELVPWSHPPDV 1701
EI RRRN AII+HPDAGKTTLTEKLLLYGGA+Q+AGAVR+RADQR ATSDWME+EKQRGISITSTVLSFDY G HINLLDTPGHQ DFSEDTYRTLAA+DNAV L+DAAKGLEPQTRKL EV KL +P+FTF NKMDRPAL+PFEL+DQIE +F + PV+WPIG GE F+G+L+RET TVHLFE+ R KA D+A + LDD + L +L+ +++ QL+EDAEMLD L+EPLD++ V+ G Q+PMFFGSAM NFGVELFL+ FL G +P R P D +EF+ F+FKLQAN+DP+HRDRLAY+RVVSGRY KGMKV HSR K+Q+ L+ AQ LF +R V A+PGDVIGINNPG +IGDT++TGS +I FPGIPSFSPE F Y+RNP+P KYKNYRKGL +L++EGAVQ+L +R DD NPILAAVG LQF+VVQHRM EYG + +LEP+ Y +ARWAEGGW A++ A K GKLFGIF AQD++ RPVLLFRNEWK+ +++ L LVP S PPD+
Sbjct: 63 EIERRRNLAIIAHPDAGKTTLTEKLLLYGGAVQQAGAVRTRADQRAATSDWMELEKQRGISITSTVLSFDYLGKHINLLDTPGHQ--------DFSEDTYRTLAASDNAVTLIDAAKGLEPQTRKLLEVTKLSGIPVFTFCNKMDRPALSPFELIDQIEADFKLTCVPVVWPIGMGEEFRGLLERETKTVHLFEKGIRTGKAVDMATVPLDDAETLEDLLGADVYAQLLEDAEMLDGLIEPLDLDEVMDGNQTPMFFGSAMNNFGVELFLRFFLQWGSRPQKRLISPPXXXPKATDDVIVEEEFIEADDSEFSAFVFKLQANIDPKHRDRLAYLRVVSGRYNKGMKVSHSRSKRQITLASAQSLFGSDRAAVTEAFPGDVIGINNPGGLLSIGDTLYTGSQRIAFPGIPSFSPEVFAYVRNPDPGKYKNYRKGLKELMEEGAVQMLNDRGDDTENNPILAAVGQLQFEVVQHRMASEYGCEIVLEPM-SYSSARWAEGGWAAVDAAKKDGKLFGIFNAQDRWKRPVLLFRNEWKVDQLKDT--DLALVPCSTPPDI 607
BLAST of mRNA_H-elongata_contig13793.2659.1 vs. uniprot
Match: A0A1Z5KM76_FISSO (Peptide chain release factor 3 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KM76_FISSO) HSP 1 Score: 712 bits (1837), Expect = 6.930e-252 Identity = 349/556 (62.77%), Postives = 441/556 (79.32%), Query Frame = 1
Query: 43 STPSKGGQWAAAPLEINRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRADQRKATSDWMEMEKQRGISITSTVLSFDYEGNHINLLDTPGHQASTTAAAPDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKMDRPALNPFELLDQIEREFGMRMAPVLWPIGEGERFKGVLDRETSTVHLFERASRKSKATDVAELTLDDPQLPELI-TQELFEQLIEDAEMLDELVEPLDMERVLTGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRTGAST-IAPDYNEFTGFIFKLQANLDPRHRDRLAYVRVVSGRYEKGMKVQHSRMKKQVILSHAQQLFAQERETVQVAYPGDVIGINNPGHFAIGDTIFTGSTKIRFPGIPSFSPECFTYMRNPNPSKYKNYRKGLDQLLDEGAVQVLRERNDDGNGNPILAAVGTLQFDVVQHRMKDEYGVDTILEPLPGYKTARWAEGGWDAINEATKAGKLFGIFFAQDKFGRPVLLFRNEWKLANIQEELPQLELVPWSHPPDVE 1704
S+ S + A EI +RRN AIISHPD+GKTT+TEKLLLYGGA+Q+AGAVR +A+QR SD++ ME++RGISI+STVL+FDY+ I LLDTPGHQ DFSEDTYR LAA D A+ML+DAAKGLEPQTRKLFEVC+LR +P+FTFVNKMDRPAL+P++++DQIE+EFG+ P+LWPIG+G+RFKGVLDR T+TVHL+++A ++ + E+ LDD QL +LI EL+++L+EDAE+L+E++ PLDMERV+ G+QSP+FFGSAMTNFGV+LFL F +G +P R T I PDY EFTGF+FK QANLDP+HRDRLAYVR+VSG+YEKGMKV HSR K+Q L+ AQ LF +R +V A+PGDVIGINNPG FAIGDT+++G++ I FPGIPSFSPE F Y+R PNPS YK+++KG+DQLL EGAVQ LR+RND+ NG +LAAVG LQF+VVQ R+ EY VD+ +EPL GY ARW +GGW+A+ +A K GKLFGI QD++ RPVLLFRN+WK A++ EE L+L PWS PP ++
Sbjct: 40 SSESSSSTYQAPLSEITKRRNLAIISHPDSGKTTMTEKLLLYGGALQQAGAVRHKAEQRATQSDFLAMEQERGISISSTVLNFDYQDYTIRLLDTPGHQ--------DFSEDTYRALAATDQALMLMDAAKGLEPQTRKLFEVCQLRSIPLFTFVNKMDRPALSPYDIMDQIEQEFGLEPHPILWPIGDGDRFKGVLDRTTNTVHLYQKAEKRGAKAEATEVALDDEQLKDLIGDSELYDKLMEDAELLNEMIPPLDMERVMIGKQSPLFFGSAMTNFGVQLFLDHFCRMGTEPLGRETSKDILITPDYGEFTGFVFKTQANLDPKHRDRLAYVRIVSGKYEKGMKVNHSRSKRQYNLAQAQALFGSDRTSVDEAFPGDVIGINNPGSFAIGDTLYSGNSPIAFPGIPSFSPEKFAYIRAPNPSDYKSFKKGIDQLLAEGAVQALRQRNDE-NGPLLLAAVGQLQFEVVQARLLSEYKVDSKMEPL-GYSLARWVDGGWEAVEKADKDGKLFGIMIVQDQWKRPVLLFRNDWKAASLAEEEKYLQLKPWSAPPAMD 585
BLAST of mRNA_H-elongata_contig13793.2659.1 vs. uniprot
Match: A0A6H5KH59_9PHAE (Tr-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH59_9PHAE) HSP 1 Score: 703 bits (1814), Expect = 1.420e-250 Identity = 367/470 (78.09%), Postives = 388/470 (82.55%), Query Frame = 1
Query: 31 PDAPSTPSKGGQWAAAPLEINRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRADQRKATSDWMEMEKQRGISITSTVLSFDYEGNHINLLDTPGHQASTTAAAPDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKMDRPALNPFELLDQIEREFGMRMAPVLWPIGEGERFKGVLDRETSTVHLFERASRKSKATDVAELTLDDPQLPELITQELFEQLIEDAEMLDELVEPLDMERVLTGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRTGASTIAPDYNEFTGFIFKLQANLDPRHRDRLAYVRVVSGRYEKGMKVQHSRMK-KQVILSHAQQLFAQERETVQVAYPGDVIGINNPGHFAIGDTIFTGSTKIRFPGIPSFSPECFTYMRNPNPSKYKNYRKGLDQLLDEGAVQVLRERNDDGNGNPILAAVGTLQFD 1437
P AP+T SKGGQWAA P EI+RRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSR+DQRKATSDWME+EKQRGISITSTVLSF+Y GNHINLLDTPGHQ DFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNK+DRP+L+PFELLDQIEREFGM+MAPVLWPIG+GE FKGVLDR+T+TVHLFERA+R KATD+ E+ L DP+LPELIT+EL EQL+ED EMLDELVEPLDMERVL GEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRR G VQHSRMK KQV L+HAQQLFAQERETV AYPGDVIGINNPGHFAIGDTIFTGS KIRFPGIPSFSPECF YMRNPNPSKYKNYRKGLDQ+L RER+DDGNGNPILAAVGTLQFD
Sbjct: 36 PVAPTTTSKGGQWAATPFEIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEYAGNHINLLDTPGHQ--------DFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGEEFKGVLDRDTNTVHLFERAARTKKATDMPEIDLHDPKLPELITEELHEQLLEDVEMLDELVEPLDMERVLIGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRMG---------------------------------------------VQHSRMKGKQVTLAHAQQLFAQERETVLAAYPGDVIGINNPGHFAIGDTIFTGSNKIRFPGIPSFSPECFAYMRNPNPSKYKNYRKGLDQML--------RERSDDGNGNPILAAVGTLQFD 444
BLAST of mRNA_H-elongata_contig13793.2659.1 vs. uniprot
Match: A0A7S4QFI9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QFI9_9STRA) HSP 1 Score: 704 bits (1818), Expect = 1.980e-248 Identity = 349/570 (61.23%), Postives = 436/570 (76.49%), Query Frame = 1
Query: 73 AAPLEINRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRADQRKATSDWMEMEKQRGISITSTVLSFDYEGNHINLLDTPGHQASTTAAAPDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKMDRPALNPFELLDQIEREFGMRMAPVLWPIGEGERFKGVLDRETSTVHLFERASRKSKATDVAELTLDDP-QLPELITQ-ELFEQLIEDAEMLDELVEPLDMERVLTGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRTG----------------------ASTIAPDYNEFTGFIFKLQANLDPRHRDRLAYVRVVSGRYEKGMKVQHSRMK--KQVILSHAQQLFAQERETVQVAYPGDVIGINNPGHFAIGDTIFTGSTKIRFPGIPSFSPECFTYMRNPNPSKYKNYRKGLDQLLDEGAVQVLRERNDDGNGNPILAAVGTLQFDVVQHRMKDEYGVDTILEPLPGYKTARWAEGGWDAINEATKAGKLFGIFFAQDKFGRPVLLFRNEWKLANIQEELPQLELVPWSHPPDVE 1704
A EI+RRRN AIISHPD+GKTT+TEKLLLYGGA+Q+AGAVR +A+QR SD+MEMEK+RGISI+STV++FDY+G +N+LDTPGHQ DFSEDTYR LAAADNAVML+DAAKGLEPQTRKLFEVC++R+LP+FTFVNKMDRPAL P+E++DQIE EFG+ P+LWPIG+G+RFKGVLDR T+ VHL+ + +++ +V E+ L+D +L ELI EL EL+ PLD+ER++ +QSP+FFGSAMTNFGV+LFL +F +G KP R + P++ EFTGF+FK QANLDP+HRDRLAYVR+VSG YEKGMKV HSR K K+ L+ AQ LF R++++VAYPGDVIGINNPG+FAIGDT+FTG+ K+ FPGIPSFSPE F Y+RNPNPS YK+++KG+DQLL EGAVQ LR+RNDDG G ILAAVG LQF+VVQ R+++EYGV+++LEP+ GY ARWA+GGWDA+++A K GKLFGI QD++ RPVLLFRN+WK A++ E LEL+PWS PP +
Sbjct: 62 APQTEIDRRRNLAIISHPDSGKTTMTEKLLLYGGALQQAGAVRQKAEQRATASDFMEMEKERGISISSTVMNFDYQGLRVNILDTPGHQ--------DFSEDTYRALAAADNAVMLLDAAKGLEPQTRKLFEVCRMRQLPLFTFVNKMDRPALTPYEIMDQIEEEFGLETHPILWPIGDGDRFKGVLDRLTNIVHLYSKPTKRGAKAEVVEVPLEDEAKLKELIDDDELXXXXXXXXXXXVELMNPLDLERIMAADQSPLFFGSAMTNFGVQLFLDKFCDMGTKPLGRNASKRADGXXXXXXXXXXXXXXXXXTELVPPEHEEFTGFVFKTQANLDPKHRDRLAYVRIVSGTYEKGMKVGHSRSKASKKYNLAQAQALFGNSRDSIEVAYPGDVIGINNPGNFAIGDTLFTGNAKVAFPGIPSFSPEKFAYIRNPNPSTYKSFQKGIDQLLAEGAVQALRQRNDDGGGPLILAAVGQLQFEVVQARLENEYGVESVLEPM-GYTMARWADGGWDAVDKADKDGKLFGIMIVQDRWKRPVLLFRNDWKAASVAAEEKYLELLPWSRPPSFD 622 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13793.2659.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13793.2659.1 >prot_H-elongata_contig13793.2659.1 ID=prot_H-elongata_contig13793.2659.1|Name=mRNA_H-elongata_contig13793.2659.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=569bp MATVQVCDTEPDAPSTPSKGGQWAAAPLEINRRRNFAIISHPDAGKTTLTback to top mRNA from alignment at H-elongata_contig13793:1388..6130+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13793.2659.1 ID=mRNA_H-elongata_contig13793.2659.1|Name=mRNA_H-elongata_contig13793.2659.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4743bp|location=Sequence derived from alignment at H-elongata_contig13793:1388..6130+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13793:1388..6130+ >mRNA_H-elongata_contig13793.2659.1 ID=mRNA_H-elongata_contig13793.2659.1|Name=mRNA_H-elongata_contig13793.2659.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3414bp|location=Sequence derived from alignment at H-elongata_contig13793:1388..6130+ (Himanthalia elongata Himel1 dioecious)back to top |