mRNA_H-elongata_contig13772.2649.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13772.2649.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT) HSP 1 Score: 285 bits (729), Expect = 7.420e-78 Identity = 215/734 (29.29%), Postives = 356/734 (48.50%), Query Frame = 1
Query: 1 CEACFQAKAKRYAVPKTTDERASVKGQRFFVDVCGPMKHLSLSG----IIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKFEGE-FQYELDRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEELDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARWSVHEHK-MAPKGEKCVFMGIPRNFPTGTVSVLL--------VMTRQIV-ERQTVQWIDGPKKTGGDGT----GSDDRSMKPAGGKTILGRGTAKLNVQELGQDQQLETQEAFLKHEQEQQRKEGEAGSEAAIHCFLPAIEEAN----------VEDALACDDGGQMAMHATLDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEYR--KIPGAMGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVV---DGEAKVVVV-VHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKFEVK--KGIKIPATSGVP--TLSKADEPRNPEEKEEKRKFPYREAVGALLWTATMTRPDIASAVRAVARFCENIGPAHKKAV 2085
CE+C K R PK T RAS + DVCGPM S + F+DDY+++ V F+K K + ++ Y +K +R+DNGG++ + F+ L I H+ T P P+ NG AER + L E A ++M +P+ + W +A+ A ++S T S + +PFE F + P +L+ FG + Y H+ K + K KC+F+G +P GT L + +R ++ E ++ + + + +D + P G+ + +NV++ Q L++ Q G+ + F+ +E N E+ C D T DI EPRN +A + W+KA ++E ++E+ ++ V P DK ++G++ ++K K + VEK+K RLVAQG+ EG+ Y E +SP SI LLA A D E+ D AFL+ D+ +E+Y++ PE YR + P + +L K +YGL Q+ RCWN+ S + + G++Q AD C++ K V +G+ V++ +HVDDIL + D ++ + KFK++D+G+ S+ +G I R+R +R L I+Q Y+E ++++F ++ K + P G LS + P N E Y++ +G L + T TRPD+A+AV ++++ H K V
Sbjct: 473 CESCVMGKQHRTPFPKDTRHRASELFEIIHTDVCGPMHVKSFGNSKYFVTFIDDYSKYTQVYFLKSKDEVLEKFKEFVS-YVNTLGKKVKVLRSDNGGEYCSKAFKDYLKEHGILHQTTVPYNPEQNGTAERMNRTLLEAARSMMYHA----GMPK-EFWAEAVNTATYTRNRSPTNSLNNA-TPFECLFNRKPDVSNLKVFGCVAYVHIPDHQRKKLEEKSRKCMFVG----YPDGTKGFKLYDLTKKTFIRSRDVIFEERSFHKFKYEQSSESNSDVYYPAKEDSQVNPPIGQVQIQADDENVNVEQNPQP--------ILENNVPLQENNNRVGARYEDN-FMREVENLNQPRQRRAPERYEEMYVCADD------LTADINEPRNISEAWSNEYNTQWKKATDSEFNALMENGTWELVPPPDDKNIVGSRWVFKVKRKADGSVEKFKARLVAQGYSQTEGIDYNEVFSPVVRNTSIRSLLALANILDWEIHQMDVRTAFLQGDLTDEIYMKQPEGYRSKENPDHVCKLKKSLYGLKQSARCWNSTLDSFLKSSGYKQVGADSCLYMKSVKLQNGKINFVILSIHVDDILWFSNDVIMLEEEKVAIGTKFKVEDLGEVSHILGMLIKRDRDSRTLTISQSKYLEGVLKRFNMEECKPVSTPLEPGKQFHELSDDERPANIHE--------YQKIIGCLTYVTTATRPDLAAAVGILSKYMTKPSQEHWKGV 1172
BLAST of mRNA_H-elongata_contig13772.2649.1 vs. uniprot
Match: A0A6S7HNY1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HNY1_PARCT) HSP 1 Score: 283 bits (724), Expect = 3.140e-77 Identity = 212/725 (29.24%), Postives = 361/725 (49.79%), Query Frame = 1
Query: 1 CEACFQAKAKRYAVPKTTDERASVKGQRFFVDVCGPMKHLSLSG----IIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKF-EGEFQYELDRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEELDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARWSVHEHK-MAPKGEKCVFMGIPRNFPTGTVSVLLV--MTRQIVERQTVQWIDGPKKTGGDGTGS----------DD--RSMKPAGGKTILGRGTAKLNVQELGQDQQLETQEAFLKHEQEQQRKEGEAGSEAAIHCFLPAIEEANVEDALACDDGGQMAMHATLDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEY--RKIPGAMGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVV---DGEAK-VVVVVHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKFEVK--KGIKIPATSG--VPTLSKADEPRNPEEKEEKRKFPYREAVGALLWTATMTRPDIASAVRAVARFCENIGPAHKKAV 2085
CE C K R P +RA+ + DVCGPM S+ G + F+DDYTR+ V F+K K + A + T S+K +RTDNGG++ EF+ L + I H+ T P P NGV+ER + L E ++M + + W +A+ A + ++S TTS + +P+E F + P +LR FG +A + K K K VF+G +P GT L TR+ + + + +++G DG DD ++ ++ G V E + +++ Q +E+ R+ G G + P+ DD +A + T DI EP + ++A +W++A ++E ++++ ++ V PK K ++G++ ++K K + VE++K RLVAQG+ +G+ Y E +SP SI LLA A D E+ D + AFL+ ++DE ++++ PE Y ++ P + +LN+ IYGL QA RCWN+ + + + G+ + NAD C++ K + +G+ V++ ++VDDIL + + + + L ++F+++DMG+ SY +G + RNR+AR L INQ Y+E ++++F ++ K + P G +LS+ D P + E Y+ A+G L + TRPD+A+AV ++++ G H + V
Sbjct: 459 CEGCIMGKQHRTKYPSGVAKRATEPFELVHSDVCGPMSVNSIGGSRYFVTFIDDYTRYTYVYFIKHKDEVLAKFKEFVNLATNLTGKSVKTLRTDNGGEYCSKEFESFLKEKGIVHQLTVPYNPAQNGVSERMNRTLVESTRSMMSHGKTPV-----EFWAEAINTAVYLRNRSPTTSLKEI-TPYECLFKQKPDVSNLRVFGCEAFAHIPEKQRKKFDEKSRKAVFIG----YPEGTKGYKLYDPSTRKFIRSRDIVFVEGKFHDFKDGCSGKTCTDFYIPVDDVIPQVEIQDVPAVVIEGDHNELVDEENEREEVHVQPVGATYEENFMRETGNLGDKRQRRA--PS----------RFDDKCYVADNLTADINEPVHIQEAWTGDHSVEWKEATDSEYESLMKNDTWELVPPPKGKNIVGSRWVFKVKHTADGSVERFKARLVAQGYSQSQGIDYQEIFSPVVRYTSIRSLLAVANICDWEISQMDVKTAFLQGELDEVIFMKQPEGYVDQERPDHVCKLNRSIYGLKQAARCWNSAIDTFLISNGYTKSNADPCIYIKSIKRKNGKIDFVILALYVDDILWFSNNTEMLKKEKEALAKRFQVEDMGEVSYVLGMSVKRNREARTLTINQPKYLEGVLKRFGMQECKAVSTPLEPGRKFESLSENDTPIDVRE--------YQMAIGCLTYATNATRPDLAAAVGILSKYMARPGKDHWQGV 1153
BLAST of mRNA_H-elongata_contig13772.2649.1 vs. uniprot
Match: A0A8I7BEN6_HORVV (Uncharacterized protein n=26 Tax=cellular organisms TaxID=131567 RepID=A0A8I7BEN6_HORVV) HSP 1 Score: 282 bits (722), Expect = 5.590e-77 Identity = 221/729 (30.32%), Postives = 342/729 (46.91%), Query Frame = 1
Query: 1 CEACFQAKAKRYAVPKTTDERASVKGQRFFVDVCGPMKHLSLSGIIFV----DDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKF-EGEFQYELDRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEELDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARWSVHEHKMAPKGEKCVFMGIPRNFPTGTVSVLLVMTRQIVERQTVQWIDGPKKTGGDGTGSDDRSMKPAGGKTILGRGTAKLNVQELGQD---QQLETQEAFLKHEQEQQRKEGEAGSEAAIHCFLPAIEEANVEDALACDD------------------GGQMAMHATLDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEYRKIPGA--MGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVVDGEAKVVVVVHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKFEV---KKGIKIPATSGVPTLSKADEPRNPEEKEEKRKFPYREAVGALLWTATMTRPDIASAVRAVARFCENIGPAHKKAVVDM 2094
CE C K + ERAS + DVCGPM + G +V DD +R+ + +K KS+T ++ ++ IKC+R+D GG++ EF L + I + TPP TPQ NGV+ER + L + ++M D ++ L T A F KSV T+ P+ELWF K P L+ +G Y + + K+ PK EKCVF+G P+ T+ + + GKT + + + L + L ++ +++E E ++ E A E P EE N +D A D G + LD EP N +AM P+ + W +A ++E+ M E+ + V P ++ I K ++K+K N V YK RLVA+GF ++GV Y E +SP S+ ++LA AA D E+ D + AFL ++ EELY+ PE + GA + +L + IYGLVQA R WN +F + A GF Q + C+++KV G + +V++VDDIL D ++ A L + F +KD+G+A+Y +G I R+R R + ++Q Y++ +++KF + KKG +P G+ LSK P ++E+ PY AVG+L++ TRPDI + V R+ N G H AV ++
Sbjct: 471 CEPCLMGKMTKTPFSGIM-ERASDLLEIIHTDVCGPMNVEARGGYRYVLTLTDDLSRYGYIYLMKHKSETFEKFKEFQSEVENQRDRKIKCLRSDRGGEYLSHEFGTHLRKYGIVSQLTPPGTPQRNGVSERRNRTLLDMVRSMMSLTDLPLSFWGYALETTA-FTLNRAPSKSVETT------PYELWFSKKPKLSFLKVWGCDAYVK-KLQPEKLEPKAEKCVFIGYPKE----TIGYTFYLRSE--------------------------------GKTFVAKNGSFLEKEFLSKEVSGRKVELDEVITPPLEQ----ESSATQEVVPVVPTPTEEEVNDDDHEASDQVTTEPRRSTRVRSAPEWYGNPVMEIMLLDNGEPSNYEEAMAGPDSNKWLEAMKSEIGSMYENKVWTLVDLPDERQAIENKWIFKKKTDANGNVTVYKARLVAKGFRQIQGVDYEETFSPVAKLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGNLKEELYMMQPEGFVDPKGANKVCKLQRSIYGLVQASRSWNIRFNEVIKAFGFIQVYGEACMYKKV-SGSSVAFLVLYVDDILLMGNDIEMLESIKAYLNKSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYLDKILKKFNMENSKKGF-LPVLQGM-RLSKTQSPTTAADREKMSSVPYASAVGSLMYAMLCTRPDINLVISLVGRYQSNPGAEHWTAVKNI 1147
BLAST of mRNA_H-elongata_contig13772.2649.1 vs. uniprot
Match: UPI00202469D1 (DDE-type integrase/transposase/recombinase n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=UPI00202469D1) HSP 1 Score: 270 bits (691), Expect = 6.010e-74 Identity = 212/715 (29.65%), Postives = 342/715 (47.83%), Query Frame = 1
Query: 1 CEACFQAKAKRYAVPKTTDERASVKGQRFFVDVCGPMKHLSLSGIIFV----DDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKF-EGEFQYELDRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEELDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARWSVHEHKMAPKGEKCVFMGIPRN------FPTGTVSVLLVMTRQIVERQTVQWIDGPKKTGGDGTGSDD-RSMKPAGGKTILGRGTAKLNVQELGQDQQLETQEAFLKHEQEQQRKEGEAGSEAAIHCFLPAIEEANVEDALACDDGGQMAMHATLDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEY--RKIPGAMGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVVDGEAKVVVVVHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKFEV---KKGIKIPATSGVPTLSKADEPRNPEEKEEKRKFPYREAVGALLWTATMTRPDIASAVRAVARFCENIGPAHKKAVVDM 2094
CE C K + T ERA+ + DVCGPM + G +V DD +R+ V +K KS+T + ++ IK +R+D GG++ EF L + I + TPP TPQ NGV+ER + L + ++M ++ ++P + W A+ A +++ + S + +P+ELWF K P L+ +G Y + + K+ PK EKCVF+G P+ + + + +E++ + K+ G D+ ++P G T +E D ET + + R + +A + G + LD EP N +AM P+ D W +A ++E+ M E+ + P D+ I K ++K+K + V YK RLVA+G+ V+GV Y E +SP S+ ++LA AA D E+ D + AFL + EELY+ PE + K + +L + IYGLVQA R WN +F + A GF Q + CV++KV G + ++++VDDIL D ++ A L + F +KD+G+A+Y +G I R+R R + ++Q Y++ +++KF + KKG +P GV LS A P E++E+ PY A+G++++ TRPD+ AV V R+ N G H AV ++
Sbjct: 143 CEPCLMGKMTKTPFSGTM-ERATNLLEIIHTDVCGPMSVEARGGYRYVLTLTDDLSRYGYVYLMKHKSETFEKFKEFQNEVENQRDRKIKFLRSDRGGEYLSHEFGTHLRKCGIVSQLTPPGTPQRNGVSERRNRTLLDMVRSMM----SLTDLPLS-FWGYALETATFTLNRAPSKSVE--TTPYELWFGKKPKLSFLKVWGCDAYVK-KLQPEKLEPKSEKCVFIGYPKETIGYTFYLRSEGKIFVAKNGSFLEKEFLS-----KEVSGRKVELDEVLPLEPENGATQENVPEVPAPTREEVNDDDHETSDQVATELRRSTR------TRSAPEWY-----------------GNPVLEIMLLDNGEPSNYEEAMAGPDSDKWLEAMKSEIGSMYENEVWTLTDLPDDRRAIENKWIFKKKTDADGNVTIYKARLVAKGYRQVQGVDYDETFSPVAKLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLKEELYMMQPEGFVDPKNADKVCKLQRSIYGLVQASRSWNIRFDEMIKAFGFTQTYGEACVYKKV-SGSSVAFLILYVDDILLMGNDIEFLESIKAYLNKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYLDKILKKFNMDQSKKGF-LPVLQGV-QLSTAQCPTTAEDREKMSVIPYASAIGSIMYAMLCTRPDVNLAVSLVGRYQSNPGKEHWTAVKNI 817
BLAST of mRNA_H-elongata_contig13772.2649.1 vs. uniprot
Match: A0A446P200_TRITD (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A446P200_TRITD) HSP 1 Score: 271 bits (692), Expect = 5.180e-73 Identity = 206/714 (28.85%), Postives = 337/714 (47.20%), Query Frame = 1
Query: 1 CEACFQAKAKRYAVPKTTDERASVKGQRFFVDVCGPMKHLSLSG----IIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKFEG-EFQYELDRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEELDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARWSVHEHKMAPKGEKCVFMGIPRN------FPTGTVSVLLVMTRQIVERQTVQWIDGPKKTGGDGTGSDDRSMKPAGGKTILGRGTAKLNVQELGQDQQLETQEAFLKHEQEQQRKEGEAGSEAAIHCFLPAIEEANVEDALACDDGGQMAMHATLDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEYRKIPGA--MGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVVDGEAKVVVVVHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKFEV---KKGIKIPATSGVPTLSKADEPRNPEEKEEKRKFPYREAVGALLWTATMTRPDIASAVRAVARFCENIGPAHKKAVVDM 2094
CE C K + T ERA+ + DVCGPM + +G + F DD +R+ + +K KS+T ++ + IK +R D GG++ EF L I + TPP TPQ NGV+ER + L + ++ + ++ N+P + W A+ A +++ + S + +P+ELWF K P L+ +G Y + + K+ PK EKCVF+G P+ + + +E++ + +K D +K + + + +N + D + Q+ + R E + L LD EP N +AM SP+ W +A ++EM M E+ + V P D+ I K ++K+K + V YK RLVA+GF V+GV Y E + P S+ ++LA AA D E+ D + AFL ++EELY+ E + GA + +L + IYGLVQA R WN +F S + A GF Q + C+++KV G + ++++VDDIL D +D L + F +KD+G+A+Y +G I R+R R + ++Q YV+ +++KF++ KKG + GV LS+ P E++E+ + PY A+G++++ TRPD+ A+ R+ N G H AV ++
Sbjct: 472 CETCLMGKMTKTLFSGTM-ERATDLLEIIHTDVCGPMNVEARAGYRYFLTFTDDLSRYGYIYLMKHKSETFEKFKEFQSEVENHRNKKIKFLRPDRGGEYLSYEFGVHLKNCGIVSQLTPPGTPQRNGVSERRNRTLLD----MVRSMISLTNLPLS-FWGYALETAAFTLNRAPSKSVE--MTPYELWFGKKPKLSFLKVWGCDAYVK-KLQPDKLEPKSEKCVFIGYPKETIGYTFYHKSEGKTFVAKFGNFLEKEFLSKEVSGRKVELDEVTVPSPLLKSSTSQKTVSVTPTPVNEEANDNDHETSDQDTTEPRRSTRVRSAPEWYGNPVLEVML-------------------------LDHDEPTNYEEAMVSPDSAKWLEAMKSEMGSMYENKVWTLVDLPDDRQAIENKWIFKKKTDADGNVTVYKARLVAKGFRQVQGVDYDETFLPVAMLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLEEELYMMQLEGFVDPKGANKVCKLQRSIYGLVQASRSWNKRFDSVIKAFGFIQTFGEACIYKKV-SGSSVAFLILYVDDILLIGNDIKFLDSIKGYLNKSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYVDKILKKFKMDQAKKGF-LHVLQGV-KLSQTQCPTTAEDREKMKDVPYASAIGSIMYAMLCTRPDVCLAISLAGRYQSNPGVDHWTAVKNI 1148
BLAST of mRNA_H-elongata_contig13772.2649.1 vs. uniprot
Match: A0A5N6LW24_9ASTR (Integrase catalytic domain-containing protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LW24_9ASTR) HSP 1 Score: 266 bits (681), Expect = 1.310e-72 Identity = 212/713 (29.73%), Postives = 340/713 (47.69%), Query Frame = 1
Query: 1 CEACFQAKAKRYAVPKTTDERASVKGQRFFVDVCGPMKHLSLSG----IIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKFEG-EFQYELDRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEELDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARWSVHEHKMAPKGEKCVFMGIPRNFPTGTVSVLLVMTRQIVERQTVQWIDGPKKTGGDGTGSDDRSMKPAGG---KTILGRGTAK--LNVQELGQDQQLETQEAFLKHEQEQQRKEGEAGSEAAIHCFLPAIEEANVEDA-LACDDGGQMAMHATLDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEY--RKIPGAMGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVVDGEAKVVVVVHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKFEVKKGIK--IPATSGVPTLSKADEPRNPEEKEEKRKFPYREAVGALLWTATMTRPDIASAVRAVARFCENIGPAHKKAVVDM 2094
CE+C K + ERA DVCGP + +S + + F+DDY+R+ V +K K +T + +IK +R+D GG++ EF L R I + TPP TPQ NGV+ER + L + ++M N+P + W+ A+ A + + + T + K+P+E+WF P +LR +G Y ++ K+ P+GEK VF+G ++ + P ++ S+K G K L RGT +N++E+ ++ Q E +QE E + + + N D L DG ++ + A D EP N + A+ PE W A +EM+ M ++ + V P +G+K ++K+K + V YK RLVA+GF +GV Y E +SP SI +LLA AA D E+ D + AFL + E++Y+ PE + K P + +LNK IYGL QA RCWN +F + GF + + CV+RK G ++++VDDIL + ++ L F +KD+G+A+Y +G I R+R R L ++Q Y++ M+ +F ++ K IP T G L+K+ P E + PY A+G++++ TRPD++ A+ +RF ++ G AH AV ++
Sbjct: 142 CESCLAGKLTKDPFTHV-GERAKDLLALIHTDVCGPFRTMSRNHERYFVSFIDDYSRYAYVYLMKHKHETFEKFKEFQNEVENQLGKTIKALRSDRGGEYLSLEFINHLKERGIISQPTPPGTPQLNGVSERRNRTLLDMVRSMMCRT----NLPHS-FWSFALMTAARIVNLAPTKKVN--KTPYEIWFGTKPNLSYLRVWGCNAYVTRDSND-KLDPRGEKVVFVGY--------------------HNKSGYYFYHPD--------ANLISIKRKGHFLEKEFLDRGTGSNIVNLEEI-REPQTTADEVGTSDQQEVVANESDLNTS-----IRRSSRTRNAPDRYLGHLDGSEVLLVAEPDN-EPTNHKTAISDPESAKWLDAMNSEMQSMRDNQVWDLVELPPGSRAVGSKWIFKRKTDMHGNVHTYKARLVAKGFTQTQGVDYDETFSPVAMIKSIRILLAIAAYYDYEIWQMDVKTAFLNGHLSEDVYMVQPEGFVDPKYPNKVCKLNKSIYGLKQASRCWNLRFDQKIKEFGFIKNEDEPCVYRKA-SGRTISFLILYVDDILIIGNNIPMLNEVKHWLGNCFAMKDLGEAAYILGIKIHRDRSKRLLGMSQSAYIDKMMTRFNMENSKKGTIPMTKGT-VLNKSQSPSTDIEIRRMQAIPYASAIGSIMYAMLCTRPDVSYALSMTSRFQQSPGIAHWTAVKNI 808
BLAST of mRNA_H-elongata_contig13772.2649.1 vs. uniprot
Match: A0A7D9HXK4_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HXK4_PARCT) HSP 1 Score: 265 bits (678), Expect = 4.990e-72 Identity = 192/634 (30.28%), Postives = 321/634 (50.63%), Query Frame = 1
Query: 1 CEACFQAKAKRYAVPKTTDERASVKGQRFFVDVCGPMKHLSLSG----IIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKFEG-EFQYELDRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEELDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARWSVHEHK-MAPKGEKCVFMGIPRNFPTGTVSVLLV--MTRQIVERQTVQWIDGPKKTGGDGTGS--DDRSMKPAGGKTILGRGT---AKLNVQELGQDQQLETQEAFLKHEQEQQRKEGEAGSEAAIHCFLPAIEEANVEDALACDDGGQMAMHATLDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEY--RKIPGAMGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVV-DGEAKVVVVVHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKF 1854
CEAC + K R PKT D RAS + + DVCGPM SL G + F+DDY+R+ V F+K KS+ T IK +R+DNGG++ EF+ L + I H+ + P P NGVAER + + E +++ ++P + W +A+ + V ++S T + + + +P+E F K P +LR FG + Y ++ K + K K +FMG +P G L ++R+ + + V +++ T S DDR+ I+ T N E+ + E E ++Q + G E ++ E D+ +A T DI EP N +A +W++A ++E ++E+ ++ V+ PK K V+G+K ++K K +N V++YK RLVAQG+ EGV Y E +SP +I LLA + AK+ E+ D + AFL+ ++ EE+Y+ P+ Y +++P + +L K IYGL Q+ RCWNN + + + G++Q +D C++ K + D +++ +HVDDIL + D + + KFK+ DMG+ + +G I R+R+ K+ I+Q Y++ ++++F
Sbjct: 369 CEACIKGKYHRCPYPKTADYRASEPFEHVYSDVCGPMSVPSLGGSRYYVSFIDDYSRYTFVYFMKNKSEVLEKFKEFHTFATNITGKPIKVLRSDNGGEYSSKEFESFLKKNGIVHQLSVPYNPAQNGVAERMNRTVVETTRSMLSHA----HIPN-EFWAEAVNTSVYVRNRSPTKALNDI-TPYECLFEKKPDVSNLRVFGCITYMHIPDNQRKKLDAKSRKSIFMG----YPEGVKGYKLYDPVSRKFLRSRDVIFLEKKFHDFDIQTSSNFDDRAEDDI---PIMIEETPVDGNENQDEIANQRVAENAEG---NQQANDQPVGGTFEETFMNEVRNVGERRMRRPPNRFDEECYLANDITADINEPINMDEAFSGEHSAEWKQATDSEYNSLIENETWELVSLPKGKNVVGSKWVFKVKRDENGCVQRYKARLVAQGYTQAEGVDYSEVFSPVVRNTTIRSLLALSNAKNWEVHQMDVKTAFLQGNL-EEIYMRQPDGYVNKELPNHVCKLKKSIYGLKQSARCWNNAIDTFLKSSGYKQMESDPCLYMKSIRDQNGVIILSIHVDDILLFSNDSCMLSEEKKLIGLKFKVDDMGEVKHVLGMVIRRDRRKGKMMISQSTYLQGILKRF 985
BLAST of mRNA_H-elongata_contig13772.2649.1 vs. uniprot
Match: A0A438JH99_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JH99_VITVI) HSP 1 Score: 266 bits (681), Expect = 9.320e-72 Identity = 214/752 (28.46%), Postives = 352/752 (46.81%), Query Frame = 1
Query: 1 CEACFQAKAKRYAVPKTTDERASVKGQRFFVDVCGPMKHLSLSG----IIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKFEGE-FQYELDRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEELDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARWSVHEHKMAPKGEKCVFMGIPRN------FPTGTVSVLLVMTRQIVERQTVQWIDGPKKTGGDGTGSDDRSMKPAGGKTILGRGTAKLNVQELGQDQQLETQEAFLKHEQEQQRKEGEAGSEAAIHCFLPAIEEANVEDA------------------------------------------LACDDGGQMAMHATLDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEYRKIP--GAMGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVVDGEAKVVVVVHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKFEVKKGIK--IPATSGVPTLSKADEPRNPEEKEEKRKFPYREAVGALLWTATMTRPDIASAVRAVARFCENIGPAHKKAV 2085
CE+C + K + T ERAS DVCGPMK + G I F DD +R+ + +K KS++ ++ SIK +R+D GG++ E F L I + TPP TPQ+NGV+ER + L + ++M D +N LW A+ A + +K T + +P+E+W + P H++ +G Y + + K+ + +KC F+G P+ + V + +ER+ + GS + ++ L + N Q+ ++E ++ F + QR + I PAI + V + L D +H D +P+N +AM+ + + W++A E+E+ M + + V KD IG K +YK+K+G + KVE YK RLVA+G+ EG+ Y E +SP SI +LLA AA D E+ D + AFL ++ E++Y+ PE Y + + +L + IYGL QA R WN F + F + + CV+++ G + +V++VDDIL D M L ++F +KD+G+A+Y +G I R+R R L ++Q +Y++++++++ ++ + +P +GV TLS+ D P+ PEE+E + PY AVGA+++T T TRPD+A A+ +R+ N G H K V
Sbjct: 329 CESCLKGKMTKSPFIGT-GERASELLGLVHTDVCGPMKIQAKGGYSYFITFTDDMSRYGFLYLMKHKSESFEMFKRFRSEVEKQTGNSIKVLRSDRGGEYLSENFIDYLRENGILSQWTPPGTPQHNGVSERRNRTLLDMVRSMMGFTDLPVN-----LWGYALEAAAYLLNKIPTKTVS--TTPYEIWKGRKPNLKHIKVWGCPAYVK-KLQTDKLEARSDKCRFIGYPKETMGYYFYHPLDHKVFVARGGTFLEREFLA------------EGSHGKEIE-------LDETQEETNETTAAQEHEMEFEQPFFDVLKSTQRLQS-----PTIVAPEPAIVQEQVNEXXXXXXXXXXXXXXLEQIQQPLNPIHEPLRRSNRAHRAPDRLNLMVQDDLSNEVHHNDD--DPKNYEEAMQILDRNKWQEAMESEIESMKINKVWTLVEASKDIKPIGCKWVYKKKIGADGKVETYKARLVAKGYRQKEGIDYDETFSPVAMLKSIRILLAIAAYYDYEIWQMDVKTAFLNGELKEDVYMTQPEGYTSMSDHNKVCKLRRSIYGLKQASRSWNIHFNKTIEKFDFVKCEEEPCVYKRF-SGSTIIFLVLYVDDILLIGNDIPAMQGTKVWLSEQFSMKDLGEAAYILGIKIYRDRSKRLLGLSQSMYIDTILKRYNMENSKRGYLPIGTGV-TLSREDCPKTPEERERMNRVPYASAVGAIMYTMTCTRPDVAYALSVASRYQANPGEEHWKVV 1043
BLAST of mRNA_H-elongata_contig13772.2649.1 vs. uniprot
Match: A0A8J6L9T5_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6L9T5_TENMO) HSP 1 Score: 265 bits (678), Expect = 6.540e-71 Identity = 214/699 (30.62%), Postives = 338/699 (48.35%), Query Frame = 1
Query: 1 CEACFQAKAKRYAVPKTTDERASVKGQRFFVDVCGPMKHLSLSG----IIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKFEG-EFQYELDRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEELDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARWSVHEHK-MAPKGEKCVFMGIP-----RNFPTGTVSVLLVMTRQIV-ERQTVQWIDGPKKTGGDGTGSDDRSMKPAGGKTILGRGTAKLNVQELGQDQQLE-TQEAFLKHEQEQQRKEGEAGSEAAIHCFLPAIEEANVEDALACDDGGQMAMHATLDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEYRKIPGAMGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVVDGEAKVVVVVHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKFEVKKGIKIPATSGVPTLSKADEPRNPEEKEEKRKFPYREAVGALLWTATMTRPDIASAVRAVARFCEN 2058
CE C KA R +P T + + G+R DVCGP + S+SG ++F DDYT+F+ + F+K KS+ L +A+ T + IK + +DNG +F+ + + L + I T P TPQ NG +ER + + E A A+M NI P+ LW + + A + +++ ++ G SP+ELW+ K P HLR G+ Y K M PK K + +G R F L+ +R +V E +T++ K+++ + QE+ D+ E T + E E G + S+ + N A + MH + EP +AM+S + D W++A + EM+ + E+ ++ V P+ K I K +YK K + ++K+K RLV +G+ G+ Y E +SP ++I LL+ AA + +L D AFL D+ E +Y++ PE + G + RL K +YGL QA RCWN KF + + +GF + AD C+F + G K+ V++VDD L A D+ + +F +L +KFK+ AS+++G I R ++++Q Y E ++E+F + K T V + RN E FPYR+AVGAL++ TRPDIA A+ V+R EN
Sbjct: 474 CEGCMYGKAHR--LPFGTRTKTTNAGERVHTDVCGPFQE-SMSGFKYFVLFKDDYTKFRTIYFLKEKSEVAEKLSQFLAETKTVGHV-IKELLSDNGKEFDNKDVRSMLRKEGIIQRLTMPYTPQQNGCSERENRTVVETARAIMHAHGNI---PQT-LWAEIVRSANYILNRTGPSNVPGT-SPYELWYGKKPGLKHLRVIGSTCYVHVPKQTRKKMDPKATKGILIGYDHDDGYRIFDKEECK--LIRSRDVVFEEKTLEHT-----------------------KSVIIPEDDSTSKQEIQADRDDELTDDXXXXXETEDTSISGTSESDCEHNADRTTRCLRNRSTLKAPEKLQDYVMHLATSLEEPETYGEAMKSDQKDYWKEAMDREMKALQENETWELVDLPQGKRAISNKWVYKVKTNADGSIDKFKARLVIKGYSQQRGIDYDETFSPVARKSTIRTLLSVAANEGMKLAQIDVSTAFLYGDLKETIYMQQPEGHCDGSGRVCRLKKSLYGLKQAPRCWNEKFSNYIIKLGFRRSEADPCLFVRQT-GSTKMFFVLYVDDGLIAANDEQELQQFIDDLGRKFKI-TAKPASFFLGLEINREEDGS-VRVSQTHYTEKLLERFNMS-NCKAVTTPIVKDNDTEESSRNSE-------FPYRQAVGALMFLMCGTRPDIAYALSVVSRNLEN 1127
BLAST of mRNA_H-elongata_contig13772.2649.1 vs. uniprot
Match: A0A0V1KQY5_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trichinella nativa TaxID=6335 RepID=A0A0V1KQY5_9BILA) HSP 1 Score: 261 bits (668), Expect = 9.750e-71 Identity = 207/705 (29.36%), Postives = 338/705 (47.94%), Query Frame = 1
Query: 1 CEACFQAKAKRYAVPKTTDERASVKGQRFFVDVCGPMKHLSLSG----IIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKFEG-EFQYELDRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEELDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARW-SVHEHKMAPKGEKCVFMGIPRNFPTGTVSVLLVMTRQIVERQT-VQWIDGPKKTGGDGTGSDDRSMKPAGGKTILGRGTAKLNVQELGQDQQLETQEAFLKHEQEQQRKEGEA-GSEAAIHCFLPAIEEANVEDALACDDGGQMAMHATLDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEYRKIPGAMGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVVDGEAKVVVVVHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKFEVKKGIKIPATSGVPT--LSKADEPRNPEEKEEKRKFPYREAVGALLWTATMTRPDIASAVRAVARFCENIGPAHKKAV 2085
CE C R + T+ R SV G+ DVCGP H S+ G I F D+ + ++ V F+K K + L + + + ++ +RTD G +F E L + I HE TPP TPQ NG+AER + L EKA A++ + N+PR LW +A+ A + ++ + + K+P+E WF + PT +HLR FG Y H K PK K +F+G P+ + + + V++ T VQ+ + +K G +D M+ A + +D LE + ++ ++R G GS+ I ++ L + AM A D P +A+E + W+++ E+ + + + P D+ I K ++K K+ + +V KYK RLVA+G+ + Y E ++P S+ LLA AA +D E+ FD + AFL IDE ++ E P + G + +L + +YGL QA R WN + + + ++ AD C++ E +++ ++VDD L + + +L +F++ +GD S ++G I +R R + I Q Y+ ++ KF ++ K AT G P+ LSK P + +E+ + + PYR AVG+L++ TRPDI+ V VA+F EN G +H KAV
Sbjct: 257 CEGCVFGSMTRKPHKEVTERRQSVPGEIIHADVCGPFIHPSVGGNRYFICFKDESSGYRKVYFMKTKDEVLRCLKTALTEIKQETGRDVQRIRTDRGTEFANRELDNFLTEKKIVHEKTPPYTPQCNGMAERENRTLAEKARAML----HTRNLPRC-LWAEAVHTAAYLLNR-IPNRKEITKTPYEEWFGRRPTVEHLRIFGCDAYVHIPDQHRRKFDPKARKVIFVGYG---PSNKMFRVFDTNKHRVDKVTDVQFNESLQKRLVLIDGEEDSWMQTA----------------DKDEDDFLEYD---ITDDKTEKRGPGRPPGSKNKIKVISNPLKM-----ELRSKSTERTAMLAAAD---PLTEEEALEGANAEKWKESMLEEISALHMNDTWILTDLPADRKTIQCKWVFKSKINSDGEVSKYKARLVAKGYSQRAEIDYFETFAPVVRYESVRTLLAIAADEDLEILQFDVKTAFLHGKIDELIFKEQPPCFNDRSGRVCKLQRALYGLKQAPRAWNKRLNDFLLTLNLQRAEADPCIYVSAPGAECRIIFGLYVDDGLLCCSNLTVLKELVKKLDDEFEI-IVGDPSTFVGLEIYLDRSKRTIAIGQKNYIRRVLLKFNME-SCKSVATPGDPSIKLSKDMAPSSDDERNQMQLIPYRAAVGSLIFLMNCTRPDISFEVSKVAQFAENPGLSHWKAV 923 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13772.2649.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13772.2649.1 >prot_H-elongata_contig13772.2649.1 ID=prot_H-elongata_contig13772.2649.1|Name=mRNA_H-elongata_contig13772.2649.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=528bp MGYARWSVHEHKMAPKGEKCVFMGIPRNFPTGTVSVLLVMTRQIVERQTVback to top mRNA from alignment at H-elongata_contig13772:2058..4702- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13772.2649.1 ID=mRNA_H-elongata_contig13772.2649.1|Name=mRNA_H-elongata_contig13772.2649.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2645bp|location=Sequence derived from alignment at H-elongata_contig13772:2058..4702- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13772:2058..4702- >mRNA_H-elongata_contig13772.2649.1 ID=mRNA_H-elongata_contig13772.2649.1|Name=mRNA_H-elongata_contig13772.2649.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3168bp|location=Sequence derived from alignment at H-elongata_contig13772:2058..4702- (Himanthalia elongata Himel1 dioecious)back to top |