mRNA_H-elongata_contig13772.2649.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig13772.2649.1
Unique NamemRNA_H-elongata_contig13772.2649.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig13772.2649.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT)

HSP 1 Score: 285 bits (729), Expect = 7.420e-78
Identity = 215/734 (29.29%), Postives = 356/734 (48.50%), Query Frame = 1
Query:    1 CEACFQAKAKRYAVPKTTDERASVKGQRFFVDVCGPMKHLSLSG----IIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKFEGE-FQYELDRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEELDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARWSVHEHK-MAPKGEKCVFMGIPRNFPTGTVSVLL--------VMTRQIV-ERQTVQWIDGPKKTGGDGT----GSDDRSMKPAGGKTILGRGTAKLNVQELGQDQQLETQEAFLKHEQEQQRKEGEAGSEAAIHCFLPAIEEAN----------VEDALACDDGGQMAMHATLDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEYR--KIPGAMGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVV---DGEAKVVVV-VHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKFEVK--KGIKIPATSGVP--TLSKADEPRNPEEKEEKRKFPYREAVGALLWTATMTRPDIASAVRAVARFCENIGPAHKKAV 2085
            CE+C   K  R   PK T  RAS   +    DVCGPM   S       + F+DDY+++  V F+K K +        ++ Y       +K +R+DNGG++  + F+  L    I H+ T P  P+ NG AER  + L E A ++M        +P+ + W +A+  A    ++S T S +   +PFE  F + P   +L+ FG + Y     H+ K +  K  KC+F+G    +P GT    L        + +R ++ E ++       + +  +        +D  + P  G+  +      +NV++  Q          L++    Q      G+    + F+  +E  N           E+   C D        T DI EPRN  +A  +     W+KA ++E   ++E+  ++ V  P DK ++G++ ++K K   +  VEK+K RLVAQG+   EG+ Y E +SP     SI  LLA A   D E+   D   AFL+ D+ +E+Y++ PE YR  + P  + +L K +YGL Q+ RCWN+   S + + G++Q  AD C++ K V   +G+   V++ +HVDDIL  + D   ++     +  KFK++D+G+ S+ +G  I R+R +R L I+Q  Y+E ++++F ++  K +  P   G     LS  + P N  E        Y++ +G L +  T TRPD+A+AV  ++++       H K V
Sbjct:  473 CESCVMGKQHRTPFPKDTRHRASELFEIIHTDVCGPMHVKSFGNSKYFVTFIDDYSKYTQVYFLKSKDEVLEKFKEFVS-YVNTLGKKVKVLRSDNGGEYCSKAFKDYLKEHGILHQTTVPYNPEQNGTAERMNRTLLEAARSMMYHA----GMPK-EFWAEAVNTATYTRNRSPTNSLNNA-TPFECLFNRKPDVSNLKVFGCVAYVHIPDHQRKKLEEKSRKCMFVG----YPDGTKGFKLYDLTKKTFIRSRDVIFEERSFHKFKYEQSSESNSDVYYPAKEDSQVNPPIGQVQIQADDENVNVEQNPQP--------ILENNVPLQENNNRVGARYEDN-FMREVENLNQPRQRRAPERYEEMYVCADD------LTADINEPRNISEAWSNEYNTQWKKATDSEFNALMENGTWELVPPPDDKNIVGSRWVFKVKRKADGSVEKFKARLVAQGYSQTEGIDYNEVFSPVVRNTSIRSLLALANILDWEIHQMDVRTAFLQGDLTDEIYMKQPEGYRSKENPDHVCKLKKSLYGLKQSARCWNSTLDSFLKSSGYKQVGADSCLYMKSVKLQNGKINFVILSIHVDDILWFSNDVIMLEEEKVAIGTKFKVEDLGEVSHILGMLIKRDRDSRTLTISQSKYLEGVLKRFNMEECKPVSTPLEPGKQFHELSDDERPANIHE--------YQKIIGCLTYVTTATRPDLAAAVGILSKYMTKPSQEHWKGV 1172          
BLAST of mRNA_H-elongata_contig13772.2649.1 vs. uniprot
Match: A0A6S7HNY1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HNY1_PARCT)

HSP 1 Score: 283 bits (724), Expect = 3.140e-77
Identity = 212/725 (29.24%), Postives = 361/725 (49.79%), Query Frame = 1
Query:    1 CEACFQAKAKRYAVPKTTDERASVKGQRFFVDVCGPMKHLSLSG----IIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKF-EGEFQYELDRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEELDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARWSVHEHK-MAPKGEKCVFMGIPRNFPTGTVSVLLV--MTRQIVERQTVQWIDGPKKTGGDGTGS----------DD--RSMKPAGGKTILGRGTAKLNVQELGQDQQLETQEAFLKHEQEQQRKEGEAGSEAAIHCFLPAIEEANVEDALACDDGGQMAMHATLDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEY--RKIPGAMGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVV---DGEAK-VVVVVHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKFEVK--KGIKIPATSG--VPTLSKADEPRNPEEKEEKRKFPYREAVGALLWTATMTRPDIASAVRAVARFCENIGPAHKKAV 2085
            CE C   K  R   P    +RA+   +    DVCGPM   S+ G    + F+DDYTR+  V F+K K +  A     +   T     S+K +RTDNGG++   EF+  L  + I H+ T P  P  NGV+ER  + L E   ++M      +     + W +A+  A  + ++S TTS   + +P+E  F + P   +LR FG   +A     + K    K  K VF+G    +P GT    L    TR+ +  + + +++G      DG             DD    ++      ++  G     V E  + +++  Q     +E+   R+ G  G +       P+            DD   +A + T DI EP + ++A       +W++A ++E   ++++  ++ V  PK K ++G++ ++K K   +  VE++K RLVAQG+   +G+ Y E +SP     SI  LLA A   D E+   D + AFL+ ++DE ++++ PE Y  ++ P  + +LN+ IYGL QA RCWN+   + + + G+ + NAD C++ K +   +G+   V++ ++VDDIL  + +   + +    L ++F+++DMG+ SY +G  + RNR+AR L INQ  Y+E ++++F ++  K +  P   G    +LS+ D P +  E        Y+ A+G L +    TRPD+A+AV  ++++    G  H + V
Sbjct:  459 CEGCIMGKQHRTKYPSGVAKRATEPFELVHSDVCGPMSVNSIGGSRYFVTFIDDYTRYTYVYFIKHKDEVLAKFKEFVNLATNLTGKSVKTLRTDNGGEYCSKEFESFLKEKGIVHQLTVPYNPAQNGVSERMNRTLVESTRSMMSHGKTPV-----EFWAEAINTAVYLRNRSPTTSLKEI-TPYECLFKQKPDVSNLRVFGCEAFAHIPEKQRKKFDEKSRKAVFIG----YPEGTKGYKLYDPSTRKFIRSRDIVFVEGKFHDFKDGCSGKTCTDFYIPVDDVIPQVEIQDVPAVVIEGDHNELVDEENEREEVHVQPVGATYEENFMRETGNLGDKRQRRA--PS----------RFDDKCYVADNLTADINEPVHIQEAWTGDHSVEWKEATDSEYESLMKNDTWELVPPPKGKNIVGSRWVFKVKHTADGSVERFKARLVAQGYSQSQGIDYQEIFSPVVRYTSIRSLLAVANICDWEISQMDVKTAFLQGELDEVIFMKQPEGYVDQERPDHVCKLNRSIYGLKQAARCWNSAIDTFLISNGYTKSNADPCIYIKSIKRKNGKIDFVILALYVDDILWFSNNTEMLKKEKEALAKRFQVEDMGEVSYVLGMSVKRNREARTLTINQPKYLEGVLKRFGMQECKAVSTPLEPGRKFESLSENDTPIDVRE--------YQMAIGCLTYATNATRPDLAAAVGILSKYMARPGKDHWQGV 1153          
BLAST of mRNA_H-elongata_contig13772.2649.1 vs. uniprot
Match: A0A8I7BEN6_HORVV (Uncharacterized protein n=26 Tax=cellular organisms TaxID=131567 RepID=A0A8I7BEN6_HORVV)

HSP 1 Score: 282 bits (722), Expect = 5.590e-77
Identity = 221/729 (30.32%), Postives = 342/729 (46.91%), Query Frame = 1
Query:    1 CEACFQAKAKRYAVPKTTDERASVKGQRFFVDVCGPMKHLSLSGIIFV----DDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKF-EGEFQYELDRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEELDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARWSVHEHKMAPKGEKCVFMGIPRNFPTGTVSVLLVMTRQIVERQTVQWIDGPKKTGGDGTGSDDRSMKPAGGKTILGRGTAKLNVQELGQD---QQLETQEAFLKHEQEQQRKEGEAGSEAAIHCFLPAIEEANVEDALACDD------------------GGQMAMHATLDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEYRKIPGA--MGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVVDGEAKVVVVVHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKFEV---KKGIKIPATSGVPTLSKADEPRNPEEKEEKRKFPYREAVGALLWTATMTRPDIASAVRAVARFCENIGPAHKKAVVDM 2094
            CE C   K  +        ERAS   +    DVCGPM   +  G  +V    DD +R+  +  +K KS+T        ++    ++  IKC+R+D GG++   EF   L +  I  + TPP TPQ NGV+ER  + L +   ++M   D  ++     L T A F       KSV T+      P+ELWF K P    L+ +G   Y +  +   K+ PK EKCVF+G P+     T+     +  +                                GKT + +  + L  + L ++   +++E  E      ++    E  A  E       P  EE N +D  A D                   G  +     LD  EP N  +AM  P+ + W +A ++E+  M E+  +  V  P ++  I  K ++K+K   N  V  YK RLVA+GF  ++GV Y E +SP     S+ ++LA AA  D E+   D + AFL  ++ EELY+  PE +    GA  + +L + IYGLVQA R WN +F   + A GF Q   + C+++KV  G +   +V++VDDIL    D   ++   A L + F +KD+G+A+Y +G  I R+R  R + ++Q  Y++ +++KF +   KKG  +P   G+  LSK   P    ++E+    PY  AVG+L++    TRPDI   +  V R+  N G  H  AV ++
Sbjct:  471 CEPCLMGKMTKTPFSGIM-ERASDLLEIIHTDVCGPMNVEARGGYRYVLTLTDDLSRYGYIYLMKHKSETFEKFKEFQSEVENQRDRKIKCLRSDRGGEYLSHEFGTHLRKYGIVSQLTPPGTPQRNGVSERRNRTLLDMVRSMMSLTDLPLSFWGYALETTA-FTLNRAPSKSVETT------PYELWFSKKPKLSFLKVWGCDAYVK-KLQPEKLEPKAEKCVFIGYPKE----TIGYTFYLRSE--------------------------------GKTFVAKNGSFLEKEFLSKEVSGRKVELDEVITPPLEQ----ESSATQEVVPVVPTPTEEEVNDDDHEASDQVTTEPRRSTRVRSAPEWYGNPVMEIMLLDNGEPSNYEEAMAGPDSNKWLEAMKSEIGSMYENKVWTLVDLPDERQAIENKWIFKKKTDANGNVTVYKARLVAKGFRQIQGVDYEETFSPVAKLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGNLKEELYMMQPEGFVDPKGANKVCKLQRSIYGLVQASRSWNIRFNEVIKAFGFIQVYGEACMYKKV-SGSSVAFLVLYVDDILLMGNDIEMLESIKAYLNKSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYLDKILKKFNMENSKKGF-LPVLQGM-RLSKTQSPTTAADREKMSSVPYASAVGSLMYAMLCTRPDINLVISLVGRYQSNPGAEHWTAVKNI 1147          
BLAST of mRNA_H-elongata_contig13772.2649.1 vs. uniprot
Match: UPI00202469D1 (DDE-type integrase/transposase/recombinase n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=UPI00202469D1)

HSP 1 Score: 270 bits (691), Expect = 6.010e-74
Identity = 212/715 (29.65%), Postives = 342/715 (47.83%), Query Frame = 1
Query:    1 CEACFQAKAKRYAVPKTTDERASVKGQRFFVDVCGPMKHLSLSGIIFV----DDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKF-EGEFQYELDRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEELDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARWSVHEHKMAPKGEKCVFMGIPRN------FPTGTVSVLLVMTRQIVERQTVQWIDGPKKTGGDGTGSDD-RSMKPAGGKTILGRGTAKLNVQELGQDQQLETQEAFLKHEQEQQRKEGEAGSEAAIHCFLPAIEEANVEDALACDDGGQMAMHATLDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEY--RKIPGAMGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVVDGEAKVVVVVHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKFEV---KKGIKIPATSGVPTLSKADEPRNPEEKEEKRKFPYREAVGALLWTATMTRPDIASAVRAVARFCENIGPAHKKAVVDM 2094
            CE C   K  +     T  ERA+   +    DVCGPM   +  G  +V    DD +R+  V  +K KS+T         +    ++  IK +R+D GG++   EF   L +  I  + TPP TPQ NGV+ER  + L +   ++M    ++ ++P +  W  A+  A    +++ + S +   +P+ELWF K P    L+ +G   Y +  +   K+ PK EKCVF+G P+       +      + +      +E++ +      K+  G     D+   ++P  G T           +E   D   ET +      +   R      + +A   +                 G  +     LD  EP N  +AM  P+ D W +A ++E+  M E+  +     P D+  I  K ++K+K   +  V  YK RLVA+G+  V+GV Y E +SP     S+ ++LA AA  D E+   D + AFL   + EELY+  PE +   K    + +L + IYGLVQA R WN +F   + A GF Q   + CV++KV  G +   ++++VDDIL    D   ++   A L + F +KD+G+A+Y +G  I R+R  R + ++Q  Y++ +++KF +   KKG  +P   GV  LS A  P   E++E+    PY  A+G++++    TRPD+  AV  V R+  N G  H  AV ++
Sbjct:  143 CEPCLMGKMTKTPFSGTM-ERATNLLEIIHTDVCGPMSVEARGGYRYVLTLTDDLSRYGYVYLMKHKSETFEKFKEFQNEVENQRDRKIKFLRSDRGGEYLSHEFGTHLRKCGIVSQLTPPGTPQRNGVSERRNRTLLDMVRSMM----SLTDLPLS-FWGYALETATFTLNRAPSKSVE--TTPYELWFGKKPKLSFLKVWGCDAYVK-KLQPEKLEPKSEKCVFIGYPKETIGYTFYLRSEGKIFVAKNGSFLEKEFLS-----KEVSGRKVELDEVLPLEPENGATQENVPEVPAPTREEVNDDDHETSDQVATELRRSTR------TRSAPEWY-----------------GNPVLEIMLLDNGEPSNYEEAMAGPDSDKWLEAMKSEIGSMYENEVWTLTDLPDDRRAIENKWIFKKKTDADGNVTIYKARLVAKGYRQVQGVDYDETFSPVAKLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLKEELYMMQPEGFVDPKNADKVCKLQRSIYGLVQASRSWNIRFDEMIKAFGFTQTYGEACVYKKV-SGSSVAFLILYVDDILLMGNDIEFLESIKAYLNKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYLDKILKKFNMDQSKKGF-LPVLQGV-QLSTAQCPTTAEDREKMSVIPYASAIGSIMYAMLCTRPDVNLAVSLVGRYQSNPGKEHWTAVKNI 817          
BLAST of mRNA_H-elongata_contig13772.2649.1 vs. uniprot
Match: A0A446P200_TRITD (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A446P200_TRITD)

HSP 1 Score: 271 bits (692), Expect = 5.180e-73
Identity = 206/714 (28.85%), Postives = 337/714 (47.20%), Query Frame = 1
Query:    1 CEACFQAKAKRYAVPKTTDERASVKGQRFFVDVCGPMKHLSLSG----IIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKFEG-EFQYELDRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEELDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARWSVHEHKMAPKGEKCVFMGIPRN------FPTGTVSVLLVMTRQIVERQTVQWIDGPKKTGGDGTGSDDRSMKPAGGKTILGRGTAKLNVQELGQDQQLETQEAFLKHEQEQQRKEGEAGSEAAIHCFLPAIEEANVEDALACDDGGQMAMHATLDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEYRKIPGA--MGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVVDGEAKVVVVVHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKFEV---KKGIKIPATSGVPTLSKADEPRNPEEKEEKRKFPYREAVGALLWTATMTRPDIASAVRAVARFCENIGPAHKKAVVDM 2094
            CE C   K  +     T  ERA+   +    DVCGPM   + +G    + F DD +R+  +  +K KS+T        ++    +   IK +R D GG++   EF   L    I  + TPP TPQ NGV+ER  + L +    ++  + ++ N+P +  W  A+  A    +++ + S +   +P+ELWF K P    L+ +G   Y +  +   K+ PK EKCVF+G P+       +        +      +E++ +      +K   D        +K +  +  +      +N +    D +   Q+        + R   E      +   L                         LD  EP N  +AM SP+   W +A ++EM  M E+  +  V  P D+  I  K ++K+K   +  V  YK RLVA+GF  V+GV Y E + P     S+ ++LA AA  D E+   D + AFL   ++EELY+   E +    GA  + +L + IYGLVQA R WN +F S + A GF Q   + C+++KV  G +   ++++VDDIL    D   +D     L + F +KD+G+A+Y +G  I R+R  R + ++Q  YV+ +++KF++   KKG  +    GV  LS+   P   E++E+ +  PY  A+G++++    TRPD+  A+    R+  N G  H  AV ++
Sbjct:  472 CETCLMGKMTKTLFSGTM-ERATDLLEIIHTDVCGPMNVEARAGYRYFLTFTDDLSRYGYIYLMKHKSETFEKFKEFQSEVENHRNKKIKFLRPDRGGEYLSYEFGVHLKNCGIVSQLTPPGTPQRNGVSERRNRTLLD----MVRSMISLTNLPLS-FWGYALETAAFTLNRAPSKSVE--MTPYELWFGKKPKLSFLKVWGCDAYVK-KLQPDKLEPKSEKCVFIGYPKETIGYTFYHKSEGKTFVAKFGNFLEKEFLSKEVSGRKVELDEVTVPSPLLKSSTSQKTVSVTPTPVNEEANDNDHETSDQDTTEPRRSTRVRSAPEWYGNPVLEVML-------------------------LDHDEPTNYEEAMVSPDSAKWLEAMKSEMGSMYENKVWTLVDLPDDRQAIENKWIFKKKTDADGNVTVYKARLVAKGFRQVQGVDYDETFLPVAMLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLEEELYMMQLEGFVDPKGANKVCKLQRSIYGLVQASRSWNKRFDSVIKAFGFIQTFGEACIYKKV-SGSSVAFLILYVDDILLIGNDIKFLDSIKGYLNKSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYVDKILKKFKMDQAKKGF-LHVLQGV-KLSQTQCPTTAEDREKMKDVPYASAIGSIMYAMLCTRPDVCLAISLAGRYQSNPGVDHWTAVKNI 1148          
BLAST of mRNA_H-elongata_contig13772.2649.1 vs. uniprot
Match: A0A5N6LW24_9ASTR (Integrase catalytic domain-containing protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LW24_9ASTR)

HSP 1 Score: 266 bits (681), Expect = 1.310e-72
Identity = 212/713 (29.73%), Postives = 340/713 (47.69%), Query Frame = 1
Query:    1 CEACFQAKAKRYAVPKTTDERASVKGQRFFVDVCGPMKHLSLSG----IIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKFEG-EFQYELDRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEELDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARWSVHEHKMAPKGEKCVFMGIPRNFPTGTVSVLLVMTRQIVERQTVQWIDGPKKTGGDGTGSDDRSMKPAGG---KTILGRGTAK--LNVQELGQDQQLETQEAFLKHEQEQQRKEGEAGSEAAIHCFLPAIEEANVEDA-LACDDGGQMAMHATLDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEY--RKIPGAMGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVVDGEAKVVVVVHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKFEVKKGIK--IPATSGVPTLSKADEPRNPEEKEEKRKFPYREAVGALLWTATMTRPDIASAVRAVARFCENIGPAHKKAVVDM 2094
            CE+C   K  +        ERA         DVCGP + +S +     + F+DDY+R+  V  +K K +T         +       +IK +R+D GG++   EF   L  R I  + TPP TPQ NGV+ER  + L +   ++M       N+P +  W+ A+  A  + + + T   +  K+P+E+WF   P   +LR +G   Y     ++ K+ P+GEK VF+G                       ++  +   P         ++  S+K  G    K  L RGT    +N++E+ ++ Q    E     +QE    E +  +         +    N  D  L   DG ++ + A  D  EP N + A+  PE   W  A  +EM+ M ++  +  V  P     +G+K ++K+K   +  V  YK RLVA+GF   +GV Y E +SP     SI +LLA AA  D E+   D + AFL   + E++Y+  PE +   K P  + +LNK IYGL QA RCWN +F   +   GF +   + CV+RK   G     ++++VDDIL    +   ++     L   F +KD+G+A+Y +G  I R+R  R L ++Q  Y++ M+ +F ++   K  IP T G   L+K+  P    E    +  PY  A+G++++    TRPD++ A+   +RF ++ G AH  AV ++
Sbjct:  142 CESCLAGKLTKDPFTHV-GERAKDLLALIHTDVCGPFRTMSRNHERYFVSFIDDYSRYAYVYLMKHKHETFEKFKEFQNEVENQLGKTIKALRSDRGGEYLSLEFINHLKERGIISQPTPPGTPQLNGVSERRNRTLLDMVRSMMCRT----NLPHS-FWSFALMTAARIVNLAPTKKVN--KTPYEIWFGTKPNLSYLRVWGCNAYVTRDSND-KLDPRGEKVVFVGY--------------------HNKSGYYFYHPD--------ANLISIKRKGHFLEKEFLDRGTGSNIVNLEEI-REPQTTADEVGTSDQQEVVANESDLNTS-----IRRSSRTRNAPDRYLGHLDGSEVLLVAEPDN-EPTNHKTAISDPESAKWLDAMNSEMQSMRDNQVWDLVELPPGSRAVGSKWIFKRKTDMHGNVHTYKARLVAKGFTQTQGVDYDETFSPVAMIKSIRILLAIAAYYDYEIWQMDVKTAFLNGHLSEDVYMVQPEGFVDPKYPNKVCKLNKSIYGLKQASRCWNLRFDQKIKEFGFIKNEDEPCVYRKA-SGRTISFLILYVDDILIIGNNIPMLNEVKHWLGNCFAMKDLGEAAYILGIKIHRDRSKRLLGMSQSAYIDKMMTRFNMENSKKGTIPMTKGT-VLNKSQSPSTDIEIRRMQAIPYASAIGSIMYAMLCTRPDVSYALSMTSRFQQSPGIAHWTAVKNI 808          
BLAST of mRNA_H-elongata_contig13772.2649.1 vs. uniprot
Match: A0A7D9HXK4_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HXK4_PARCT)

HSP 1 Score: 265 bits (678), Expect = 4.990e-72
Identity = 192/634 (30.28%), Postives = 321/634 (50.63%), Query Frame = 1
Query:    1 CEACFQAKAKRYAVPKTTDERASVKGQRFFVDVCGPMKHLSLSG----IIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKFEG-EFQYELDRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEELDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARWSVHEHK-MAPKGEKCVFMGIPRNFPTGTVSVLLV--MTRQIVERQTVQWIDGPKKTGGDGTGS--DDRSMKPAGGKTILGRGT---AKLNVQELGQDQQLETQEAFLKHEQEQQRKEGEAGSEAAIHCFLPAIEEANVEDALACDDGGQMAMHATLDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEY--RKIPGAMGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVV-DGEAKVVVVVHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKF 1854
            CEAC + K  R   PKT D RAS   +  + DVCGPM   SL G    + F+DDY+R+  V F+K KS+            T      IK +R+DNGG++   EF+  L +  I H+ + P  P  NGVAER  + + E   +++       ++P  + W +A+  +  V ++S T + + + +P+E  F K P   +LR FG + Y     ++ K +  K  K +FMG    +P G     L   ++R+ +  + V +++         T S  DDR+        I+   T      N  E+   +  E  E    ++Q   +  G    E  ++      E          D+   +A   T DI EP N  +A       +W++A ++E   ++E+  ++ V+ PK K V+G+K ++K K  +N  V++YK RLVAQG+   EGV Y E +SP     +I  LLA + AK+ E+   D + AFL+ ++ EE+Y+  P+ Y  +++P  + +L K IYGL Q+ RCWNN   + + + G++Q  +D C++ K + D    +++ +HVDDIL  + D   +      +  KFK+ DMG+  + +G  I R+R+  K+ I+Q  Y++ ++++F
Sbjct:  369 CEACIKGKYHRCPYPKTADYRASEPFEHVYSDVCGPMSVPSLGGSRYYVSFIDDYSRYTFVYFMKNKSEVLEKFKEFHTFATNITGKPIKVLRSDNGGEYSSKEFESFLKKNGIVHQLSVPYNPAQNGVAERMNRTVVETTRSMLSHA----HIPN-EFWAEAVNTSVYVRNRSPTKALNDI-TPYECLFEKKPDVSNLRVFGCITYMHIPDNQRKKLDAKSRKSIFMG----YPEGVKGYKLYDPVSRKFLRSRDVIFLEKKFHDFDIQTSSNFDDRAEDDI---PIMIEETPVDGNENQDEIANQRVAENAEG---NQQANDQPVGGTFEETFMNEVRNVGERRMRRPPNRFDEECYLANDITADINEPINMDEAFSGEHSAEWKQATDSEYNSLIENETWELVSLPKGKNVVGSKWVFKVKRDENGCVQRYKARLVAQGYTQAEGVDYSEVFSPVVRNTTIRSLLALSNAKNWEVHQMDVKTAFLQGNL-EEIYMRQPDGYVNKELPNHVCKLKKSIYGLKQSARCWNNAIDTFLKSSGYKQMESDPCLYMKSIRDQNGVIILSIHVDDILLFSNDSCMLSEEKKLIGLKFKVDDMGEVKHVLGMVIRRDRRKGKMMISQSTYLQGILKRF 985          
BLAST of mRNA_H-elongata_contig13772.2649.1 vs. uniprot
Match: A0A438JH99_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JH99_VITVI)

HSP 1 Score: 266 bits (681), Expect = 9.320e-72
Identity = 214/752 (28.46%), Postives = 352/752 (46.81%), Query Frame = 1
Query:    1 CEACFQAKAKRYAVPKTTDERASVKGQRFFVDVCGPMKHLSLSG----IIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKFEGE-FQYELDRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEELDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARWSVHEHKMAPKGEKCVFMGIPRN------FPTGTVSVLLVMTRQIVERQTVQWIDGPKKTGGDGTGSDDRSMKPAGGKTILGRGTAKLNVQELGQDQQLETQEAFLKHEQEQQRKEGEAGSEAAIHCFLPAIEEANVEDA------------------------------------------LACDDGGQMAMHATLDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEYRKIP--GAMGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVVDGEAKVVVVVHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKFEVKKGIK--IPATSGVPTLSKADEPRNPEEKEEKRKFPYREAVGALLWTATMTRPDIASAVRAVARFCENIGPAHKKAV 2085
            CE+C + K  +     T  ERAS        DVCGPMK  +  G    I F DD +R+  +  +K KS++        ++       SIK +R+D GG++  E F   L    I  + TPP TPQ+NGV+ER  + L +   ++M   D  +N     LW  A+  A  + +K  T +     +P+E+W  + P   H++ +G   Y +  +   K+  + +KC F+G P+       +      V +      +ER+ +              GS  + ++       L     + N     Q+ ++E ++ F    +  QR +        I    PAI +  V +                                           L   D     +H   D  +P+N  +AM+  + + W++A E+E+  M  +  +  V   KD   IG K +YK+K+G + KVE YK RLVA+G+   EG+ Y E +SP     SI +LLA AA  D E+   D + AFL  ++ E++Y+  PE Y  +     + +L + IYGL QA R WN  F   +    F +   + CV+++   G   + +V++VDDIL    D   M      L ++F +KD+G+A+Y +G  I R+R  R L ++Q +Y++++++++ ++   +  +P  +GV TLS+ D P+ PEE+E   + PY  AVGA+++T T TRPD+A A+   +R+  N G  H K V
Sbjct:  329 CESCLKGKMTKSPFIGT-GERASELLGLVHTDVCGPMKIQAKGGYSYFITFTDDMSRYGFLYLMKHKSESFEMFKRFRSEVEKQTGNSIKVLRSDRGGEYLSENFIDYLRENGILSQWTPPGTPQHNGVSERRNRTLLDMVRSMMGFTDLPVN-----LWGYALEAAAYLLNKIPTKTVS--TTPYEIWKGRKPNLKHIKVWGCPAYVK-KLQTDKLEARSDKCRFIGYPKETMGYYFYHPLDHKVFVARGGTFLEREFLA------------EGSHGKEIE-------LDETQEETNETTAAQEHEMEFEQPFFDVLKSTQRLQS-----PTIVAPEPAIVQEQVNEXXXXXXXXXXXXXXLEQIQQPLNPIHEPLRRSNRAHRAPDRLNLMVQDDLSNEVHHNDD--DPKNYEEAMQILDRNKWQEAMESEIESMKINKVWTLVEASKDIKPIGCKWVYKKKIGADGKVETYKARLVAKGYRQKEGIDYDETFSPVAMLKSIRILLAIAAYYDYEIWQMDVKTAFLNGELKEDVYMTQPEGYTSMSDHNKVCKLRRSIYGLKQASRSWNIHFNKTIEKFDFVKCEEEPCVYKRF-SGSTIIFLVLYVDDILLIGNDIPAMQGTKVWLSEQFSMKDLGEAAYILGIKIYRDRSKRLLGLSQSMYIDTILKRYNMENSKRGYLPIGTGV-TLSREDCPKTPEERERMNRVPYASAVGAIMYTMTCTRPDVAYALSVASRYQANPGEEHWKVV 1043          
BLAST of mRNA_H-elongata_contig13772.2649.1 vs. uniprot
Match: A0A8J6L9T5_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6L9T5_TENMO)

HSP 1 Score: 265 bits (678), Expect = 6.540e-71
Identity = 214/699 (30.62%), Postives = 338/699 (48.35%), Query Frame = 1
Query:    1 CEACFQAKAKRYAVPKTTDERASVKGQRFFVDVCGPMKHLSLSG----IIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKFEG-EFQYELDRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEELDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARWSVHEHK-MAPKGEKCVFMGIP-----RNFPTGTVSVLLVMTRQIV-ERQTVQWIDGPKKTGGDGTGSDDRSMKPAGGKTILGRGTAKLNVQELGQDQQLE-TQEAFLKHEQEQQRKEGEAGSEAAIHCFLPAIEEANVEDALACDDGGQMAMHATLDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEYRKIPGAMGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVVDGEAKVVVVVHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKFEVKKGIKIPATSGVPTLSKADEPRNPEEKEEKRKFPYREAVGALLWTATMTRPDIASAVRAVARFCEN 2058
            CE C   KA R  +P  T  + +  G+R   DVCGP +  S+SG    ++F DDYT+F+ + F+K KS+    L   +A+  T   + IK + +DNG +F+  + +  L +  I    T P TPQ NG +ER  + + E A A+M    NI   P+  LW + +  A  + +++  ++  G  SP+ELW+ K P   HLR  G+  Y        K M PK  K + +G       R F        L+ +R +V E +T++                         K+++       + QE+  D+  E T +     E E     G + S+   +         N     A +      MH    + EP    +AM+S + D W++A + EM+ + E+  ++ V  P+ K  I  K +YK K   +  ++K+K RLV +G+    G+ Y E +SP    ++I  LL+ AA +  +L   D   AFL  D+ E +Y++ PE +    G + RL K +YGL QA RCWN KF + +  +GF +  AD C+F +   G  K+  V++VDD L  A D+  + +F  +L +KFK+     AS+++G  I R      ++++Q  Y E ++E+F +    K   T  V      +  RN E       FPYR+AVGAL++    TRPDIA A+  V+R  EN
Sbjct:  474 CEGCMYGKAHR--LPFGTRTKTTNAGERVHTDVCGPFQE-SMSGFKYFVLFKDDYTKFRTIYFLKEKSEVAEKLSQFLAETKTVGHV-IKELLSDNGKEFDNKDVRSMLRKEGIIQRLTMPYTPQQNGCSERENRTVVETARAIMHAHGNI---PQT-LWAEIVRSANYILNRTGPSNVPGT-SPYELWYGKKPGLKHLRVIGSTCYVHVPKQTRKKMDPKATKGILIGYDHDDGYRIFDKEECK--LIRSRDVVFEEKTLEHT-----------------------KSVIIPEDDSTSKQEIQADRDDELTDDXXXXXETEDTSISGTSESDCEHNADRTTRCLRNRSTLKAPEKLQDYVMHLATSLEEPETYGEAMKSDQKDYWKEAMDREMKALQENETWELVDLPQGKRAISNKWVYKVKTNADGSIDKFKARLVIKGYSQQRGIDYDETFSPVARKSTIRTLLSVAANEGMKLAQIDVSTAFLYGDLKETIYMQQPEGHCDGSGRVCRLKKSLYGLKQAPRCWNEKFSNYIIKLGFRRSEADPCLFVRQT-GSTKMFFVLYVDDGLIAANDEQELQQFIDDLGRKFKI-TAKPASFFLGLEINREEDGS-VRVSQTHYTEKLLERFNMS-NCKAVTTPIVKDNDTEESSRNSE-------FPYRQAVGALMFLMCGTRPDIAYALSVVSRNLEN 1127          
BLAST of mRNA_H-elongata_contig13772.2649.1 vs. uniprot
Match: A0A0V1KQY5_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trichinella nativa TaxID=6335 RepID=A0A0V1KQY5_9BILA)

HSP 1 Score: 261 bits (668), Expect = 9.750e-71
Identity = 207/705 (29.36%), Postives = 338/705 (47.94%), Query Frame = 1
Query:    1 CEACFQAKAKRYAVPKTTDERASVKGQRFFVDVCGPMKHLSLSG----IIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYTTPQELSIKCVRTDNGGKFEG-EFQYELDRRSITHEHTPPDTPQYNGVAERALQLLREKAIALMEELDNIINVPRAKLWTQAMFFACDVTDKSVTTSTDGVKSPFELWF*KIPTADHLRPFGAMGYARW-SVHEHKMAPKGEKCVFMGIPRNFPTGTVSVLLVMTRQIVERQT-VQWIDGPKKTGGDGTGSDDRSMKPAGGKTILGRGTAKLNVQELGQDQQLETQEAFLKHEQEQQRKEGEA-GSEAAIHCFLPAIEEANVEDALACDDGGQMAMHATLDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDKFVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTASIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEYRKIPGAMGRLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVVDGEAKVVVVVHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRKARKLKINQHLYVESMVEKFEVKKGIKIPATSGVPT--LSKADEPRNPEEKEEKRKFPYREAVGALLWTATMTRPDIASAVRAVARFCENIGPAHKKAV 2085
            CE C      R    + T+ R SV G+    DVCGP  H S+ G    I F D+ + ++ V F+K K +    L + + +        ++ +RTD G +F   E    L  + I HE TPP TPQ NG+AER  + L EKA A++    +  N+PR  LW +A+  A  + ++ +    +  K+P+E WF + PT +HLR FG   Y      H  K  PK  K +F+G     P+  +  +    +  V++ T VQ+ +  +K      G +D  M+ A                +  +D  LE     +  ++ ++R  G   GS+  I      ++       L      + AM A  D   P    +A+E    + W+++   E+  +  +  +     P D+  I  K ++K K+  + +V KYK RLVA+G+     + Y E ++P     S+  LLA AA +D E+  FD + AFL   IDE ++ E P  +    G + +L + +YGL QA R WN +    +  +  ++  AD C++      E +++  ++VDD L    +   +     +L  +F++  +GD S ++G  I  +R  R + I Q  Y+  ++ KF ++   K  AT G P+  LSK   P + +E+ + +  PYR AVG+L++    TRPDI+  V  VA+F EN G +H KAV
Sbjct:  257 CEGCVFGSMTRKPHKEVTERRQSVPGEIIHADVCGPFIHPSVGGNRYFICFKDESSGYRKVYFMKTKDEVLRCLKTALTEIKQETGRDVQRIRTDRGTEFANRELDNFLTEKKIVHEKTPPYTPQCNGMAERENRTLAEKARAML----HTRNLPRC-LWAEAVHTAAYLLNR-IPNRKEITKTPYEEWFGRRPTVEHLRIFGCDAYVHIPDQHRRKFDPKARKVIFVGYG---PSNKMFRVFDTNKHRVDKVTDVQFNESLQKRLVLIDGEEDSWMQTA----------------DKDEDDFLEYD---ITDDKTEKRGPGRPPGSKNKIKVISNPLKM-----ELRSKSTERTAMLAAAD---PLTEEEALEGANAEKWKESMLEEISALHMNDTWILTDLPADRKTIQCKWVFKSKINSDGEVSKYKARLVAKGYSQRAEIDYFETFAPVVRYESVRTLLAIAADEDLEILQFDVKTAFLHGKIDELIFKEQPPCFNDRSGRVCKLQRALYGLKQAPRAWNKRLNDFLLTLNLQRAEADPCIYVSAPGAECRIIFGLYVDDGLLCCSNLTVLKELVKKLDDEFEI-IVGDPSTFVGLEIYLDRSKRTIAIGQKNYIRRVLLKFNME-SCKSVATPGDPSIKLSKDMAPSSDDERNQMQLIPYRAAVGSLIFLMNCTRPDISFEVSKVAQFAENPGLSHWKAV 923          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13772.2649.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7D9IUY0_PARCT7.420e-7829.29Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A6S7HNY1_PARCT3.140e-7729.24Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A8I7BEN6_HORVV5.590e-7730.32Uncharacterized protein n=26 Tax=cellular organism... [more]
UPI00202469D16.010e-7429.65DDE-type integrase/transposase/recombinase n=3 Tax... [more]
A0A446P200_TRITD5.180e-7328.85Uncharacterized protein n=2 Tax=cellular organisms... [more]
A0A5N6LW24_9ASTR1.310e-7229.73Integrase catalytic domain-containing protein n=2 ... [more]
A0A7D9HXK4_PARCT4.990e-7230.28Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A438JH99_VITVI9.320e-7228.46Retrovirus-related Pol polyprotein from transposon... [more]
A0A8J6L9T5_TENMO6.540e-7130.62Uncharacterized protein n=1 Tax=Tenebrio molitor T... [more]
A0A0V1KQY5_9BILA9.750e-7129.36Retrovirus-related Pol polyprotein from transposon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13772contigH-elongata_contig13772:2058..4702 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score203.8
Seed ortholog evalue2e-49
Seed eggNOG ortholog65672.G4TWW2
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs227R3@155619,38DPC@33154,3H58M@355688,3NUZ7@4751,3UY7N@5204,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelAgaricomycetes incertae sedis
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size2450
Cds size1584
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13772.2649.1prot_H-elongata_contig13772.2649.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig13772 2396..4105 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929818.144813-UTR-H-elongata_contig13772:2057..21841622929818.144813-UTR-H-elongata_contig13772:2057..2184Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13772 2058..2184 -
1691679169.454754-UTR-H-elongata_contig13772:2057..21841691679169.454754-UTR-H-elongata_contig13772:2057..2184Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13772 2058..2184 -
1622929818.1586587-UTR-H-elongata_contig13772:2253..23951622929818.1586587-UTR-H-elongata_contig13772:2253..2395Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13772 2254..2395 -
1691679169.4675725-UTR-H-elongata_contig13772:2253..23951691679169.4675725-UTR-H-elongata_contig13772:2253..2395Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13772 2254..2395 -
1622929818.2044005-UTR-H-elongata_contig13772:4105..47021622929818.2044005-UTR-H-elongata_contig13772:4105..4702Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13772 4106..4702 -
1691679169.5040932-UTR-H-elongata_contig13772:4105..47021691679169.5040932-UTR-H-elongata_contig13772:4105..4702Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13772 4106..4702 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929818.1767066-CDS-H-elongata_contig13772:2395..36191622929818.1767066-CDS-H-elongata_contig13772:2395..3619Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13772 2396..3619 -
1691679169.4811082-CDS-H-elongata_contig13772:2395..36191691679169.4811082-CDS-H-elongata_contig13772:2395..3619Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13772 2396..3619 -
1622929818.1930642-CDS-H-elongata_contig13772:3745..41051622929818.1930642-CDS-H-elongata_contig13772:3745..4105Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13772 3746..4105 -
1691679169.4926913-CDS-H-elongata_contig13772:3745..41051691679169.4926913-CDS-H-elongata_contig13772:3745..4105Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13772 3746..4105 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig13772.2649.1

>prot_H-elongata_contig13772.2649.1 ID=prot_H-elongata_contig13772.2649.1|Name=mRNA_H-elongata_contig13772.2649.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=528bp
MGYARWSVHEHKMAPKGEKCVFMGIPRNFPTGTVSVLLVMTRQIVERQTV
QWIDGPKKTGGDGTGSDDRSMKPAGGKTILGRGTAKLNVQELGQDQQLET
QEAFLKHEQEQQRKEGEAGSEAAIHCFLPAIEEANVEDALACDDGGQMAM
HATLDIPEPRNRRQAMESPEWDDWRKAEETEMRGMVESCGYKQVARPKDK
FVIGTKMLYKQKVGQNAKVEKYKCRLVAQGFWYVEGVHYLEKYSPTPSTA
SIWMLLATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEEYRKIPGAMG
RLNKDIYGLVQAGRCWNNKFCSDMAAIGFEQGNADLCVFRKVVDGEAKVV
VVVHVDDILAHAKDKATMDRFAAELRQKFKLKDMGDASYYMGCHITRNRK
ARKLKINQHLYVESMVEKFEVKKGIKIPATSGVPTLSKADEPRNPEEKEE
KRKFPYREAVGALLWTATMTRPDIASAVRAVARFCENIGPAHKKAVVDMA
VNSAWKHTRTRTLKPAWIRDDWCQMRC*
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mRNA from alignment at H-elongata_contig13772:2058..4702-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig13772.2649.1 ID=mRNA_H-elongata_contig13772.2649.1|Name=mRNA_H-elongata_contig13772.2649.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2645bp|location=Sequence derived from alignment at H-elongata_contig13772:2058..4702- (Himanthalia elongata Himel1 dioecious)
TGCGAGGCGTGTTTCCAGGCGAAGGCGAAGCGATATGCCGTGCCAAAGAC GACGGACGAGCGGGCTAGCGTGAAAGGACAGCGATTTTTTGTCGACGTGT GTGGGCCGATGAAGCACTTGAGTCTCAGCGGAATCATTTTTGTGGACGAC TACACCCGTTTCAAGGTGGTAAAGTTCGTTAAACGGAAGAGTGACACAAC GGCCGCCCTTTTGTCTTTGATTGCAGATTATACCACCCCGCAGGAGCTGT CGATCAAGTGCGTACGGACGGATAATGGTGGCAAGTTCGAGGGGGAATTT CAGTACGAACTAGACCGGCGCAGCATCACGCACGAGCATACCCCGCCAGA CACGCCGCAGTACAACGGGGTGGCCGAACGCGCGCTTCAACTTTTACGAG AAAAGGCGATCGCCCTGATGGAGGAGCTAGACAACATCATCAACGTGCCG CGAGCGAAGTTGTGGACTCAGGCAATGTTTTTCGCGTGCGACGTCACCGA CAAGTCAGTCACGACGTCAACCGATGGGGTTAAGTCACCGTTCGAACTGT GGTTTTGAAAAATTCCTACTGCCGATCATTTACGACCGTTTGGAGCTATG GGATACGCGCGATGGAGCGTACACGAACACAAGATGGCGCCGAAAGGAGA GAAATGCGTATTCATGGGAATTCCACGAAATTTCCCCACTGGCACCGTTA GCGTGCTACTCGTAATGACAAGGCAGATCGTGGAGCGGCAGACCGTGCAG TGGATCGACGGGCCTAAAAAGACCGGAGGCGACGGCACCGGCAGTGACGA CCGCAGCATGAAGCCGGCGGGAGGTAAAACCATTTTGGGGAGGGGAACTG CGAAGCTAAATGTTCAGGAGCTGGGACAGGACCAGCAGTTGGAGACGCAA GAGGCGTTTTTGAAACACGAGCAGGAGCAGCAACGAAAGGAGGGTGAAGC GGGATCTGTATCGGGGTCGTCGTATTTGGAGGGACCGGCCTTACCCGCGC TGCGCAAGCTCACCATAGACGGCAATGCCCCGCCCATATTACCATCGCGC ACGAGGAGTCGAAGACCTCATACAAATGTGGAGGAAGCAGCGATACATTG TTTCTTGCCGGCGATCGAAGAAGCCAACGTGGAGGATGCATTGGCGTGTG ACGACGGGGGCCAGATGGCCATGCACGCGACATTGGATATACCGGAACCG AGGAATCGGCGGCAGGCGATGGAATCACCGGAATGGGACGATTGGCGGAA AGCAGAGGAAACAGAGATGCGTGGCATGGTCGAGAGCTGCGGTTATAAGC AGGTGGCTCGGCCGAAGGATAAGTTCGTGATTGGCACAAAAATGCTCTAC AAGCAAAAAGTCGGACAGAACGCCAAGGTCGAGAAATACAAGTGCCGGCT TGTAGCTCAAGGGTTCTGGTATGTAGAAGGTGTGCACTATCTGGAGAAAT ACTCACCCACGCCATCGACCGCGTCAATCTGGATGCTTTTGGCCACAGCA GCGGCCAAGGACGGTGAGCTGCGCCATTTCGACGCGGAGCAGGCATTCCT GAAAGCGGACATCGATGAAGAATTGTACATTGAGATCCCCGAGGAGTACC GAAAGATTCCGGGGGCAATGGGACGGCTGAACAAGGATATTTACGGACTC GTACAAGCGGGGAGGTGCTGGAACAATAAGTTTTGCAGCGATATGGCAGC GATTGGATTTGAGCAGGGAAATGCGGATCTGTGCGTGTTCCGTAAGGTCG TTGACGGCGAGGCAAAAGTGGTGGTGGTCGTTCACGTGGACGATATTCTT GCTCACGCCAAGGACAAAGCGACGATGGATAGATTCGCGGCTGAGCTTAG ACAAAAGTTCAAATTGAAGGACATGGGTGACGCCAGTTACTACATGGGCT GTCACATTACTAGGAACCGCAAGGCGCGCAAGCTGAAGATCAACCAACAC TTGTACGTGGAGTCGATGGTGGAAAAGTTCGAAGTCAAGAAGGGAATCAA GATACCGGCTACATCGGGGGTGCCAACACTTTCAAAGGCGGACGAGCCGC GGAACCCGGAGGAGAAGGAGGAAAAGAGGAAGTTTCCATACCGGGAAGCA GTGGGGGCACTTCTGTGGACGGCAACGATGACACGGCCGGACATTGCAAG CGCAGTACGCGCTGTGGCCAGGTTCTGTGAAAACATTGGGCCGGCACATA AAAAGGCAGTAGTGGACATGGCTGTGAACTCTGCATGGAAGCATACACGG ACTCGGACTTTGAAGCCTGCCTGGATACGAGACGATTGGTGTCAAATGCG GTGTTGATGCTGGCGAAGGGGGCGATCAGCTGGTACTCAAGGATGCAAGA AGTGACATCACCGGGTACTTCAGAGGCAGAGTACGTTGCTTTATCAGAGG CGGTAAAAGAGGTTATATTTTTGAGACAGGTTCAGAAGTTCATGGAACCG TCGATGAGGGTTGGTGCAGTGAATGTGTTCGAGGATAATGAGGGGGCCAT TAAGCTGGCCACCAACAGACATGCTAGTTGTAGGACAAAGCACATTGATG TGAAACATCACATGGTGAGGGACGCGTCTGACGCGCAAAAGCTTAGAGTA GTATATGTGAGATCAGAAGATCAGCACGCGGACTTGCTAACGAAG
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Coding sequence (CDS) from alignment at H-elongata_contig13772:2058..4702-

>mRNA_H-elongata_contig13772.2649.1 ID=mRNA_H-elongata_contig13772.2649.1|Name=mRNA_H-elongata_contig13772.2649.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3168bp|location=Sequence derived from alignment at H-elongata_contig13772:2058..4702- (Himanthalia elongata Himel1 dioecious)
ATGGGATACGCGCGATGGAGCGTACACGAACACAAGATGGCGCCGAAAGG
AGAGAAATGCGTATTCATGGGAATTCCACGAAATTTCCCCACTGGCACCG
TTAGCGTGCTACTCGTAATGACAAGGCAGATCGTGGAGCGGCAGACCGTG
CAGTGGATCGACGGGCCTAAAAAGACCGGAGGCGACGGCACCGGCAGTGA
CGACCGCAGCATGAAGCCGGCGGGAGGTAAAACCATTTTGGGGAGGGGAA
CTGCGAAGCTAAATGTTCAGGAGCTGGGACAGGACCAGCAGTTGGAGACG
CAAGAGGCGTTTTTGAAACACGAGCAGGAGCAGCAACGAAAGGAGGGTGA
AGCGGGATCTATGGGATACGCGCGATGGAGCGTACACGAACACAAGATGG
CGCCGAAAGGAGAGAAATGCGTATTCATGGGAATTCCACGAAATTTCCCC
ACTGGCACCGTTAGCGTGCTACTCGTAATGACAAGGCAGATCGTGGAGCG
GCAGACCGTGCAGTGGATCGACGGGCCTAAAAAGACCGGAGGCGACGGCA
CCGGCAGTGACGACCGCAGCATGAAGCCGGCGGGAGGTAAAACCATTTTG
GGGAGGGGAACTGCGAAGCTAAATGTTCAGGAGCTGGGACAGGACCAGCA
GTTGGAGACGCAAGAGGCGTTTTTGAAACACGAGCAGGAGCAGCAACGAA
AGGAGGGTGAAGCGGGATCTGAAGCAGCGATACATTGTTTCTTGCCGGCG
ATCGAAGAAGCCAACGTGGAGGATGCATTGGCGTGTGACGACGGGGGCCA
GATGGCCATGCACGCGACATTGGATATACCGGAACCGAGGAATCGGCGGC
AGGCGATGGAATCACCGGAATGGGACGATTGGCGGAAAGCAGAGGAAACA
GAGATGCGTGGCATGGTCGAGAGCTGCGGTTATAAGCAGGTGGCTCGGCC
GAAGGATAAGTTCGTGATTGGCACAAAAATGCTCTACAAGCAAAAAGTCG
GACAGAACGCCAAGGTCGAGAAATACAAGTGCCGGCTTGTAGCTCAAGGG
TTCTGGTATGTAGAAGGTGTGCACTATCTGGAGAAATACTCACCCACGCC
ATCGACCGCGTCAATCTGGATGCTTTTGGCCACAGCAGCGGCCAAGGACG
GTGAGCTGCGCCATTTCGACGCGGAGCAGGCATTCCTGAAAGCGGACATC
GATGAAGAATTGTACATTGAGATCCCCGAGGAGTACCGAAAGATTCCGGG
GGCAATGGGACGGCTGAACAAGGATATTTACGGACTCGTACAAGCGGGGA
GGTGCTGGAACAATAAGTTTTGCAGCGATATGGCAGCGATTGGATTTGAG
CAGGGAAATGCGGATCTGTGCGTGTTCCGTAAGGTCGTTGACGGCGAGGC
AAAAGTGGTGGTGGTCGTTCACGTGGACGATATTCTTGCTCACGCCAAGG
ACAAAGCGACGATGGATAGATTCGCGGCTGAGCTTAGACAAAAGTTCAAA
TTGAAGGACATGGGTGACGCCAGTTACTACATGGGCTGTCACATTACTAG
GAACCGCAAGGCGCGCAAGCTGAAGATCAACCAACACTTGTACGTGGAGT
CGATGGTGGAAAAGTTCGAAGTCAAGAAGGGAATCAAGATACCGGCTACA
TCGGGGGTGCCAACACTTTCAAAGGCGGACGAGCCGCGGAACCCGGAGGA
GAAGGAGGAAAAGAGGAAGTTTCCATACCGGGAAGCAGTGGGGGCACTTC
TGTGGACGGCAACGATGACACGGCCGGACATTGCAAGCGCAGTACGCGCT
GTGGCCAGGTTCTGTGAAAACATTGGGCCGGCACATAAAAAGGCAGTAGT
GGACATGGCTGTGAACTCTGCATGGAAGCATACACGGACTCGGACTTTGA
AGCCTGCCTGGATACGAGACGATTGGTGTCAAATGCGGTGTTGAGAAGCA
GCGATACATTGTTTCTTGCCGGCGATCGAAGAAGCCAACGTGGAGGATGC
ATTGGCGTGTGACGACGGGGGCCAGATGGCCATGCACGCGACATTGGATA
TACCGGAACCGAGGAATCGGCGGCAGGCGATGGAATCACCGGAATGGGAC
GATTGGCGGAAAGCAGAGGAAACAGAGATGCGTGGCATGGTCGAGAGCTG
CGGTTATAAGCAGGTGGCTCGGCCGAAGGATAAGTTCGTGATTGGCACAA
AAATGCTCTACAAGCAAAAAGTCGGACAGAACGCCAAGGTCGAGAAATAC
AAGTGCCGGCTTGTAGCTCAAGGGTTCTGGTATGTAGAAGGTGTGCACTA
TCTGGAGAAATACTCACCCACGCCATCGACCGCGTCAATCTGGATGCTTT
TGGCCACAGCAGCGGCCAAGGACGGTGAGCTGCGCCATTTCGACGCGGAG
CAGGCATTCCTGAAAGCGGACATCGATGAAGAATTGTACATTGAGATCCC
CGAGGAGTACCGAAAGATTCCGGGGGCAATGGGACGGCTGAACAAGGATA
TTTACGGACTCGTACAAGCGGGGAGGTGCTGGAACAATAAGTTTTGCAGC
GATATGGCAGCGATTGGATTTGAGCAGGGAAATGCGGATCTGTGCGTGTT
CCGTAAGGTCGTTGACGGCGAGGCAAAAGTGGTGGTGGTCGTTCACGTGG
ACGATATTCTTGCTCACGCCAAGGACAAAGCGACGATGGATAGATTCGCG
GCTGAGCTTAGACAAAAGTTCAAATTGAAGGACATGGGTGACGCCAGTTA
CTACATGGGCTGTCACATTACTAGGAACCGCAAGGCGCGCAAGCTGAAGA
TCAACCAACACTTGTACGTGGAGTCGATGGTGGAAAAGTTCGAAGTCAAG
AAGGGAATCAAGATACCGGCTACATCGGGGGTGCCAACACTTTCAAAGGC
GGACGAGCCGCGGAACCCGGAGGAGAAGGAGGAAAAGAGGAAGTTTCCAT
ACCGGGAAGCAGTGGGGGCACTTCTGTGGACGGCAACGATGACACGGCCG
GACATTGCAAGCGCAGTACGCGCTGTGGCCAGGTTCTGTGAAAACATTGG
GCCGGCACATAAAAAGGCAGTAGTGGACATGGCTGTGAACTCTGCATGGA
AGCATACACGGACTCGGACTTTGAAGCCTGCCTGGATACGAGACGATTGG
TGTCAAATGCGGTGTTGA
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