mRNA_H-elongata_contig13768.2647.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig13768.2647.1
Unique NamemRNA_H-elongata_contig13768.2647.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig13768.2647.1 vs. uniprot
Match: A0A6H5KVC1_9PHAE (EngB-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVC1_9PHAE)

HSP 1 Score: 468 bits (1204), Expect = 5.630e-163
Identity = 243/338 (71.89%), Postives = 281/338 (83.14%), Query Frame = 1
Query:   25 SGVVRCR-HLLACPSAAAPRLACPRYRYPGQLFVALSGASLYNVRSFSGEASGGEISKRKQFKQITVDPKIIRHLDALGLGMEKKKVERGRKIRLYERGVVSSAAPGPTSSTSIPKTFDHPTWAVKKLLSVTRLDQIPPFEDRLPEVAIVGRSNVGKSTLLNALLGMKKHPLERASVSETPGETRSLDFFRLGRGKRAKLILADMPGYGFAYAQKAQRDDWKGLMMAYLRGRGIPLKRIMLLLDARHGFKKLDIEFLELLYDPKGLSPLGKYRPPKIQVLLTKCDLVKRIDLARRVSLVRQQLDEVSRRQTNLPTMMLSALKGRGLTELQRELAALDP 1035
            SG  RCR   ++ P     RL+C   R P   ++  SG++   VR FS E +G EISKR+QFKQI VD K++RHLDALGLGMEKKK+ERGRK+RLY RG VSSA PG T + + P+TFDHPTWAVK+L  V++L++IPP    LPEVA+VGRSNVGKSTLLNAL+G+KKHP +RASVSETPGETR+LDFF++G+GKRAK+I+ADMPGYGFAYA + QR DWKGLMMAYLRGRG PLKR+MLLLDARHGFKK DIEFL LLYDPKG SPLGKYRPPKIQ+LLTKCDLVKRIDLARRV  VRQQL+EVSRRQTNL  M LSALKG G+ ELQ+ELA+LDP
Sbjct:    4 SGFGRCRPRQVSAPGGL--RLSC---RQPLGAWMGRSGSTA--VRVFSTEPAGPEISKRQQFKQIAVDAKVMRHLDALGLGMEKKKIERGRKLRLYRRGAVSSAVPGATVTAAKPRTFDHPTWAVKQLSPVSKLEEIPPAAASLPEVALVGRSNVGKSTLLNALVGLKKHPNQRASVSETPGETRTLDFFQIGKGKRAKMIIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLGLLYDPKGPSPLGKYRPPKIQILLTKCDLVKRIDLARRVVFVRQQLEEVSRRQTNLSVMTLSALKGAGMVELQKELASLDP 334          
BLAST of mRNA_H-elongata_contig13768.2647.1 vs. uniprot
Match: A0A835ZG72_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG72_9STRA)

HSP 1 Score: 287 bits (735), Expect = 1.580e-89
Identity = 156/305 (51.15%), Postives = 213/305 (69.84%), Query Frame = 1
Query:  145 YNVRSFSGEASGGE---ISKRKQFKQITVDPKIIRHLDALGLGMEKKKVERGRKIRLYERGVVSSAAPGPTSSTSIPKTFDHPTWAVKKLLSVTRLDQIPPFEDRLPEVAIVGRSNVGKSTLLNALLGMKKHPLERASVSETPGETRSLDFFRLGRGKRAKLILADMPGYGFAYAQKAQRDDWKGLMMAYLRGRGIPLKRIMLLLDARHGFKKLDIEFLELLY-----DPKGLSPLGKYRPPKIQVLLTKCDLVKRIDLARRVSLVRQQLDEVSRRQTNLPTMMLSALKGRGLTELQRELAALDP 1035
            ++  + S +   GE   IS R  F+ + +D K++ +LD+  LG E  K    RK  L E+G+    +  P S+    KTFD PTWAVKK+ S   +++IPP  + LPEVA VGRSNVGKSTLLNALLG+K HPL RA+ S  PGETRS+DFFRLG+G +A+L+L D PG+GFA+A++ + + +   ++ YLRGRG  LKR+ +LLDARHGFK  D+ FL+ LY     D  G +PLG Y+PPK+QV+LTKCDLV+R +LARRVS VR +L +V+ R+T LP +M+SAL+ + + +LQ+ELA L P
Sbjct:   60 FDASAGSSDDPSGEPATISNRAAFRALPIDNKVLAYLDSRDLGRELPKRASKRKRVLIEKGLHDLHSVTPESAAL--KTFDVPTWAVKKVASAQSVEEIPPPSE-LPEVAFVGRSNVGKSTLLNALLGLKGHPLVRAATSMRPGETRSIDFFRLGKGSKAQLLLVDTPGFGFAFAKEEESERFIATLLQYLRGRGALLKRVCMLLDARHGFKANDVAFLQRLYARKGQDGLGRNPLGPYKPPKLQVILTKCDLVQRRELARRVSQVRARLSDVTPRETYLPVLMVSALRDQAVEDLQKELAGLVP 361          
BLAST of mRNA_H-elongata_contig13768.2647.1 vs. uniprot
Match: A0A7S2GV24_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GV24_9STRA)

HSP 1 Score: 177 bits (450), Expect = 1.290e-50
Identity = 97/197 (49.24%), Postives = 131/197 (66.50%), Query Frame = 1
Query:  457 EVAIVGRSNVGKSTLLNALLGMKKHPLERASVSETPGETRSLDFFRLGRGKRAKLILADMPGYGFAYAQKAQRDDWKGLMMAYLRGRGIPLKRIMLLLDARHGFKKLDIEFLELLYDPKGL--SPLGKY---RPPKIQVLLTKCDLVKRIDLARRVSLVRQQL-DEVSRRQTNLPTMMLSALKGRGLTELQRELAAL 1029
            E+A+VGRSNVGKS+LLN +L +   P  +A     PG T+ L F+      R  L L D+PGY FAY  + + + W  LM+ YLR RG  LKR+ LLLDARHG K +D +FL LLY+P+ +   P G++    PPK+QV+LTKCDLV R DL RR+  VR+++ DE+  R   L  +M+SA +G+G+ ELQRELA+L
Sbjct:   40 EIALVGRSNVGKSSLLNTVLNISASPKNKAPTGTRPGVTQKLHFY--AAATRKPLTLVDVPGYSFAYEDQERIEAWNDLMLKYLRHRGPSLKRVCLLLDARHGLKVIDRQFLRLLYEPRPIVDPPPGEHVLWDPPKLQVILTKCDLVDRFDLVRRIQRVREEMSDELPSRAGRLQAIMVSAREGKGIMELQRELASL 234          
BLAST of mRNA_H-elongata_contig13768.2647.1 vs. uniprot
Match: B7FQ16_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQ16_PHATC)

HSP 1 Score: 159 bits (402), Expect = 7.840e-42
Identity = 123/358 (34.36%), Postives = 175/358 (48.88%), Query Frame = 1
Query:  151 VRSFSGEASGGEISKRKQFKQITVDPKIIRHLDALGLGMEKKKVERGRKIRLYERGVVSSAAPGPTSSTSI------------PKTFDHPTWAVKKLLSVTRLDQ-IPPFEDRLPEVAIVGRSNVGKSTLLNALLGMKKHPLE--------------------RASVSETPGETRSLDFFRLG-RGKRAK-------LILADMPGYGFAYAQKAQRDDWKGLMMAYLRGRGIP-LKRIMLLLDARHGFKKLDIEFLELLYDPK----------GLSPLGKYRPPKIQVLLTKCDLVKRIDLARRVSLVRQQLDEVSRRQ-TNLPTMMLSALKG------------RGLTELQRELAAL 1029
             R FS      ++S R+ FK++ V P I  ++  +G+G+  ++ ++  +    E G       G   +               P  F    + VK + +V  LD   P     +PE+ + GRSNVGKSTLLNALL   KH                       +A+ S+ PGETR++ F++L  R +R         L L D+PGYGFAYA++     ++ LM  YL  RG   LKR++LL+DARHG KK D++FL  L +            G        PP IQ++LTKCDLV R DLARRV+ VR QL +   R+ + LP M++SA  G             G+ ELQ+E+ AL
Sbjct:    8 TRIFSSSVIDAKVSNRRSFKELAVHPSIHNYIQLIGVGIPPRRSKKKSQRIAIEPGRFRDRRGGRAMNPEATEDQKRERHWKPPPPFGPKAFPVKVVGNVATLDDHYPANHKNIPEIVLAGRSNVGKSTLLNALLYGNKHADAVVRQRVRGKTPESVKQPKGMKATTSDKPGETRAITFYQLAARLERENGVFYDHALRLVDLPGYGFAYAKEEAARRYRALMADYLLKRGNKYLKRVLLLIDARHGMKKADVDFLMDLQEHSRHLQENSRLDGKRKKNAQLPP-IQLVLTKCDLVTRADLARRVAQVRSQLSDCFIREPSQLPVMLVSARAGVGYNNVVGDKARGGVLELQKEIVAL 364          
BLAST of mRNA_H-elongata_contig13768.2647.1 vs. uniprot
Match: A0A7S1VXG1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VXG1_9STRA)

HSP 1 Score: 161 bits (408), Expect = 1.260e-41
Identity = 110/257 (42.80%), Postives = 142/257 (55.25%), Query Frame = 1
Query:  424 DQIPPFEDRLPEVAIVGRSNVGKSTLLNALL--GMKKHPLER------------------ASVSETPGETRSLDFFRLG----------RGKRAK----LILADMPGYGFAYAQKAQRDDWKGLMMAYLRGRGIPLKRIMLLLDARHGFKKLDIEFLELLYDP------KGLSPLGKYRPPKIQVLLTKCDLVKRIDLARRVSLVRQQL-DEVSRRQTNLPTMMLSALKGRG------------LTELQRELAALDP 1035
            +++P     L EVA+ GRSNVGKSTLLNALL       P ER                  A +S+ PGETR +  ++L           +GK+ K    L+LAD+PGYGFA+A + +  +W  LM  YL  RG  LKR++LL+DARHG K  D EFL  L +       +G +P      P IQ++LTKCDLV + DLARRV  VRQQL D + R  ++LP M++SA  G G            + ELQRELAAL P
Sbjct:  263 EELPKSSKGLSEVALAGRSNVGKSTLLNALLYGNQLGKPQERQYRRGKTPENAKLPKGVKAVMSDKPGETRRITLYQLSSEIIKPPKDEQGKKHKEKMSLLLADLPGYGFAFASEEKYKEWHDLMRHYLLDRGKSLKRVLLLIDARHGMKNADFEFLSSLQESLKSTSKEGATPKNVRELPPIQIVLTKCDLVTQDDLARRVVQVRQQLSDNLLREPSSLPVMLVSAKAGLGYNNIRGGIARGGVLELQRELAALVP 519          
BLAST of mRNA_H-elongata_contig13768.2647.1 vs. uniprot
Match: A0A1Z5JKA0_FISSO (GTP-binding protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKA0_FISSO)

HSP 1 Score: 156 bits (394), Expect = 2.170e-41
Identity = 106/290 (36.55%), Postives = 159/290 (54.83%), Query Frame = 1
Query:  148 NVRSFSGEASGGEISKRKQFKQITVDPKIIRHLDALGLGMEKKKVERGRKIRLYERGVVSSAAPGPTSSTSIPKTFD---HPTWAVKKLLSVTRLDQ---IPPFEDRLPEVAIVGRSNVGKSTLLNALLGMKKHPLE----------------------RASVSETPGETRSLDFFRLGRGKRA--KLILADMPGYGFAYAQKAQRDDWKGLMMAYLRGRGIPLKRIMLLLDARHGFKKLDIEFLELLYDP---KGLSPLGKYRPPKIQVLLTKCDLVKRIDLARRVSLV 918
            ++ SF+ + + G+ S+++QF+   VDP I++++ ++G+G+  ++ +  R     +     S A  PTS   +P  F     P   +  + +V  LD+    PP     PE+A++GRSNVGKSTLLN LL   ++                         +A  S  PGET+ + F+ L  G+ +  +L L D+PGYGFAYA +  +     L+ ++L+ R   LKRI+LL+DARHG KK DI+FL LL D    K  +   K   P IQV+LTKCDLV + DLARRV L+
Sbjct:   26 HLLSFTTDTAVGK-SQKQQFRDTPVDPSILKYITSVGVGIPPRRRKNRRNDNTPDE---VSNANNPTSW-KVPLPFGPNASPVRVIASVSAVNTLDENMGFPPVHKERPEIALIGRSNVGKSTLLNTLLYANRNENRQQEGGRAGRRSRIQTIELPRGIKAVTSNKPGETKHVTFYHLSSGEDSTCRLCLVDLPGYGFAYASEETKKTVDELIFSFLKQRQGHLKRILLLIDARHGMKKADIDFLTLLEDELVYKDSANNKKKTLPPIQVVLTKCDLVHQADLARRVRLM 310          
BLAST of mRNA_H-elongata_contig13768.2647.1 vs. uniprot
Match: A0A7S1ZZ98_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZZ98_TRICV)

HSP 1 Score: 159 bits (402), Expect = 6.190e-41
Identity = 112/265 (42.26%), Postives = 143/265 (53.96%), Query Frame = 1
Query:  424 DQIPPFEDRLPEVAIVGRSNVGKSTLLNALL-----------------------GMKKHPLERASVSETPGETRSLDFFRLG-----------RGKRAK--LILADMPGYGFAYAQKAQRDDWKGLMMAYLRGRGIPLKRIMLLLDARHGFKKLDIEFLELLYDP------KGLSPLGK------YRPPKIQVLLTKCDLVKRIDLARRVSLVRQQLDEVSRRQ-TNLPTMMLSALKG------------RGLTELQRELAALDP 1035
            D +P     LPEVA+ GRSNVGKSTLLNALL                        MK    E+A VS+ PGET+ +  ++L            R  ++K  L+LAD+PGYGFAYA + +   W  LM  YL  RG  LKRI+LL+DARHGFK  D  FLE L +       KG     K      +  P IQ++LTKCDL K+ DLARRV  V++QL +  +RQ ++LP M++SA  G             G+ +LQRELAAL P
Sbjct:  229 DDMPRSSSGLPEVALAGRSNVGKSTLLNALLYGNQPSRDGHSVERMYQRGKTPERMKLPRGEKAKVSDKPGETQDITLYQLSSDMVFLNKEGQRENKSKMSLVLADLPGYGFAYASENKATTWSELMKHYLLRRGESLKRILLLIDARHGFKNADYAFLETLQNALKEGQKKGAHVSSKQQCGLEFDLPPIQIVLTKCDLCKQDDLARRVVQVKEQLSKSLKRQPSSLPVMLVSAKTGVGYNNIRRGKARGGMLQLQRELAALVP 493          
BLAST of mRNA_H-elongata_contig13768.2647.1 vs. uniprot
Match: A0A1Z5J7J0_FISSO (GTP-binding protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J7J0_FISSO)

HSP 1 Score: 155 bits (391), Expect = 7.100e-41
Identity = 103/274 (37.59%), Postives = 149/274 (54.38%), Query Frame = 1
Query:  190 SKRKQFKQITVDPKIIRHLDALGLGMEKKKVERGRKIRLYERGVVSSAAPGPTSSTSIPKTFDHPTWAVKKLLSVTRLDQI------PPFEDRLPEVAIVGRSNVGKSTLLNALLGMKKHPLE----------------------RASVSETPGETRSLDFFRLGRGKRA--KLILADMPGYGFAYAQKAQRDDWKGLMMAYLRGRGIPLKRIMLLLDARHGFKKLDIEFLELLYDP---KGLSPLGKYRPPKIQVLLTKCDLVKRIDLARRVS 912
            S+R+QF+   VDP I++++ ++G+G+      R RK R  + G     A  PTS   +P  F      V+ + SV+ ++ +      PP     PE+A +GRSNVGKSTLLN LL   ++                         +A  S  PGET+ + F+ L  G+ +  +L L D+PGYGFAYA +  +     L+ ++L+ R   LKRI+LL+DARHG KK DI+FL +L D    K  + + K   P IQV+LTKCDLV + +LARR S
Sbjct:   41 SQRQQFRDTPVDPSILKYITSIGVGIP----PRRRKNRRND-GTTDENANNPTSW-KVPLPFGPNALPVRVIASVSAVNTLDENMGFPPVHKERPEIAFIGRSNVGKSTLLNTLLYANRNENRAADGGRAGRRSRIQTIELPKGIKAVTSNKPGETKQVTFYHLSSGEDSTCRLCLVDLPGYGFAYASEETKKTVDDLIFSFLKQRQGHLKRILLLIDARHGMKKADIDFLTMLEDELVYKDSANIKKKTLPPIQVVLTKCDLVHQGELARRCS 308          
BLAST of mRNA_H-elongata_contig13768.2647.1 vs. uniprot
Match: A0A812TAA1_SYMMI (EngB protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TAA1_SYMMI)

HSP 1 Score: 151 bits (381), Expect = 2.890e-40
Identity = 91/221 (41.18%), Postives = 131/221 (59.28%), Query Frame = 1
Query:  436 PFEDRLPEVAIVGRSNVGKSTLLNALLGMKKHPLERASVSETPGETRSLDFFRLGRGKRAK---LILADMPGYGFAYAQKAQRDDWKGLMMAYLRGRGIPLKRIMLLLDARHGFKKLDIEFL------------ELLYDPKG--------LSPLGKYRPPKIQVLLTKCDLVKRIDLARRVSLVRQQLDEVSRRQTNLPTMMLSALKGRGLTELQRELAAL 1029
            P     PEVAI+GRSN GKSTL+N+LLG      +RA VS  PGET++L F+ L +  ++K   L + DMPGYGF++  + +      L  +Y+R RG  LKR++L++DARHG K+ D   L            ++  DP                    K+Q++LTKCDLV+R+DLARR++ VR Q+   +  + +LP MM+SA KG G+ ELQ+EL++L
Sbjct:   18 PMLGECPEVAIIGRSNAGKSTLVNSLLGYDSSYTKRAPVSSKPGETQALQFYVLRKQYKSKQPALGIVDMPGYGFSFTSEKEAQRCFTLNSSYIRLRGKNLKRVLLVVDARHGLKRTDFRCLHDLMSNTFRDAGDITTDPSADFDVKFDHSKKSANDATWKLQIILTKCDLVERLDLARRIAAVRDQV-RANFFEDDLPVMMVSAAKGLGIVELQKELSSL 237          
BLAST of mRNA_H-elongata_contig13768.2647.1 vs. uniprot
Match: A0A7R9YFZ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFZ8_9STRA)

HSP 1 Score: 150 bits (380), Expect = 1.120e-37
Identity = 90/218 (41.28%), Postives = 123/218 (56.42%), Query Frame = 1
Query:  211 QITVDPKIIRHLDALGLGMEKKKVERGRKIRLYERGVVSS--------------AAPGPTSSTSIPKTF------DHPTWAVKKLLSVTRLDQIPPFEDRLPEVAIVGRSNVGKSTLLNALLGMKKHPLERASVSETPGETRSLDFFRLG-RGKRAKLILADMPGYGFAYAQKAQRDDWKGLMMAYLRGRGIPLKRIMLLLDARHGFKKLDIEFLELL 801
            Q+    +I  +L+  GLG  K    R   +R+ +RG V S              AA    +   +PK        D   W  +++  VT  ++IP  +DRLPEV I+GRSNVGKSTLLNA+L  K HPL RA  S+ PG TR+LDF+ +G + +R ++ L D PGYGFAY +  +   W  L + +L+G    L+R++LLLDARHGFK  D  FLE L
Sbjct:   44 QVRSRAQIEAYLETRGLGRIKGDRSRSGALRIAKRGRVKSGKIKGARNQVTAVEAALLRKAELKVPKEVSEYFSRDGARWNTRRIAHVTSEEEIPAPKDRLPEVMIIGRSNVGKSTLLNAILDTKGHPLRRAETSDKPGLTRTLDFYSVGGKRQRPRMALIDAPGYGFAYGKTVELLKWHHLTLRFLQGNRPSLRRLLLLLDARHGFKAADKNFLEAL 261          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13768.2647.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVC1_9PHAE5.630e-16371.89EngB-type G domain-containing protein n=2 Tax=Ecto... [more]
A0A835ZG72_9STRA1.580e-8951.15P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2GV24_9STRA1.290e-5049.24Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
B7FQ16_PHATC7.840e-4234.36Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S1VXG1_9STRA1.260e-4142.80Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1Z5JKA0_FISSO2.170e-4136.55GTP-binding protein n=1 Tax=Fistulifera solaris Ta... [more]
A0A7S1ZZ98_TRICV6.190e-4142.26Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]
A0A1Z5J7J0_FISSO7.100e-4137.59GTP-binding protein n=1 Tax=Fistulifera solaris Ta... [more]
A0A812TAA1_SYMMI2.890e-4041.18EngB protein (Fragment) n=1 Tax=Symbiodinium micro... [more]
A0A7R9YFZ8_9STRA1.120e-3741.28Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13768contigH-elongata_contig13768:2656..7252 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score470.7
Seed ortholog evalue5.9e-130
Seed eggNOG ortholog2880.D7FRN1
KEGG koko:K03978
EggNOG free text desc.GTP binding
EggNOG OGsCOG0218@1,KOG2486@2759
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionYihA1, YihA/EngB-like GTPase
Ec32 orthologEc-12_002430.1
Exons10
Model size1035
Cds size1035
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13768.2647.1prot_H-elongata_contig13768.2647.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig13768 2656..7252 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929817.7991545-CDS-H-elongata_contig13768:2655..27541622929817.7991545-CDS-H-elongata_contig13768:2655..2754Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13768 2656..2754 -
1691679169.2647657-CDS-H-elongata_contig13768:2655..27541691679169.2647657-CDS-H-elongata_contig13768:2655..2754Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13768 2656..2754 -
1622929817.8126771-CDS-H-elongata_contig13768:2903..30101622929817.8126771-CDS-H-elongata_contig13768:2903..3010Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13768 2904..3010 -
1691679169.2783418-CDS-H-elongata_contig13768:2903..30101691679169.2783418-CDS-H-elongata_contig13768:2903..3010Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13768 2904..3010 -
1622929817.8269153-CDS-H-elongata_contig13768:3294..33911622929817.8269153-CDS-H-elongata_contig13768:3294..3391Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13768 3295..3391 -
1691679169.286729-CDS-H-elongata_contig13768:3294..33911691679169.286729-CDS-H-elongata_contig13768:3294..3391Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13768 3295..3391 -
1622929817.8444555-CDS-H-elongata_contig13768:3620..36591622929817.8444555-CDS-H-elongata_contig13768:3620..3659Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13768 3621..3659 -
1691679169.2950659-CDS-H-elongata_contig13768:3620..36591691679169.2950659-CDS-H-elongata_contig13768:3620..3659Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13768 3621..3659 -
1622929817.8599467-CDS-H-elongata_contig13768:4011..40931622929817.8599467-CDS-H-elongata_contig13768:4011..4093Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13768 4012..4093 -
1691679169.3035283-CDS-H-elongata_contig13768:4011..40931691679169.3035283-CDS-H-elongata_contig13768:4011..4093Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13768 4012..4093 -
1622929817.871107-CDS-H-elongata_contig13768:4581..46321622929817.871107-CDS-H-elongata_contig13768:4581..4632Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13768 4582..4632 -
1691679169.3120823-CDS-H-elongata_contig13768:4581..46321691679169.3120823-CDS-H-elongata_contig13768:4581..4632Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13768 4582..4632 -
1622929817.8856502-CDS-H-elongata_contig13768:5100..52311622929817.8856502-CDS-H-elongata_contig13768:5100..5231Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13768 5101..5231 -
1691679169.3208754-CDS-H-elongata_contig13768:5100..52311691679169.3208754-CDS-H-elongata_contig13768:5100..5231Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13768 5101..5231 -
1622929817.9160638-CDS-H-elongata_contig13768:5722..58371622929817.9160638-CDS-H-elongata_contig13768:5722..5837Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13768 5723..5837 -
1691679169.3305135-CDS-H-elongata_contig13768:5722..58371691679169.3305135-CDS-H-elongata_contig13768:5722..5837Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13768 5723..5837 -
1622929817.9323053-CDS-H-elongata_contig13768:6160..62611622929817.9323053-CDS-H-elongata_contig13768:6160..6261Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13768 6161..6261 -
1691679169.3450491-CDS-H-elongata_contig13768:6160..62611691679169.3450491-CDS-H-elongata_contig13768:6160..6261Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13768 6161..6261 -
1622929817.9537115-CDS-H-elongata_contig13768:7039..72521622929817.9537115-CDS-H-elongata_contig13768:7039..7252Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13768 7040..7252 -
1691679169.3526173-CDS-H-elongata_contig13768:7039..72521691679169.3526173-CDS-H-elongata_contig13768:7039..7252Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13768 7040..7252 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig13768.2647.1

>prot_H-elongata_contig13768.2647.1 ID=prot_H-elongata_contig13768.2647.1|Name=mRNA_H-elongata_contig13768.2647.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=345bp
MNLAVLARSGVVRCRHLLACPSAAAPRLACPRYRYPGQLFVALSGASLYN
VRSFSGEASGGEISKRKQFKQITVDPKIIRHLDALGLGMEKKKVERGRKI
RLYERGVVSSAAPGPTSSTSIPKTFDHPTWAVKKLLSVTRLDQIPPFEDR
LPEVAIVGRSNVGKSTLLNALLGMKKHPLERASVSETPGETRSLDFFRLG
RGKRAKLILADMPGYGFAYAQKAQRDDWKGLMMAYLRGRGIPLKRIMLLL
DARHGFKKLDIEFLELLYDPKGLSPLGKYRPPKIQVLLTKCDLVKRIDLA
RRVSLVRQQLDEVSRRQTNLPTMMLSALKGRGLTELQRELAALDP
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mRNA from alignment at H-elongata_contig13768:2656..7252-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig13768.2647.1 ID=mRNA_H-elongata_contig13768.2647.1|Name=mRNA_H-elongata_contig13768.2647.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4597bp|location=Sequence derived from alignment at H-elongata_contig13768:2656..7252- (Himanthalia elongata Himel1 dioecious)
ATGAACTTGGCTGTGCTAGCCAGATCAGGGGTGGTGCGATGTCGCCACTT GCTGGCCTGCCCAAGCGCTGCCGCTCCTCGTTTAGCTTGTCCACGTTATC GATATCCTGGCCAGCTGTTTGTTGCGCTGTCTGGAGCATCTCTTTACAAT GTGAGATCCTTCTCCGGGGAGGCATCCGGCGGGGAGATAAGTAAGCGGAA GCAGTTCAAACAGGTGTGTGATGCGGGTAAATGCCGGATGGTGGGAACGT TGGCGCGAGACTGTCGAGTTTGAAGTCACGGCTGTCGGCCGTCGACCCTG TTAACTCTATCAACGCTCACATAGAGAGAGCAGTTCGTTACTCCATCTGG ACCCTCGAATATACGCATGTACTCCTTGGATAGAACCGGGGGTGCATATG AAATCGAATGTCTATACACCCTTCCCGTTCGTGTACTCTCTTTGTACCAG CCACATCCGCGTATTACAGTATTTAAATCTATATTATTTTGAGTTTGTTC AAAGACTCTCTAGGCTCTTGCATGGCGTCGCCACATGACGTCATGATGAA TGACGTAAGTGTTCAGGATAATAAGTACGAGTATACTGTACCGTCGACTC GATAGATCTACTATTGAGGAACACGATTAATCAACTTTGGCGATTTTGTG CTCAGCGGTAGTATTGTACACAATCGAACCTGACGATAGTTGGTCCCCTG GACTGCACCTCTCACGGTGCTAAGAAGGCGTTGATGTTCGAAGGGGTGGA ATGAATTAACTCGTAGTCTGCTTTTTTTTCTCTCTCAATTTTAGCTACAC TATAGGATACGCAACACTCGCTAAATCTGTGAAGTGATATCAATTCGCCG AGAAAAAAAGCAAGAAAGCAGATGCGGTCAATGCCTTTGAACGAGGGGAC GGCAGTGCCAAAGGCTTGAAATCGATGGGATCATTGCTTTTTATTTTCAA GTTGTAACGCCTCAATGTAAATCTCCCCTTTCAAATCACAGATCACCGTG GACCCGAAAATCATTCGGCACCTGGATGCACTGGGTTTGGGGATGGAAAA GAAGAAGGTCGAGAGGGGTAGGAAAATCCGTCTCTACGAAAGGTATTAAT TATATTACAAATATTCATGCGCGCGGGCGTTCTACTGTACTTGGCGGAAA CCGCACAGTACATGTACGAGTAACGTAAGGTCCACTCGGCTTTTACCTGT GTCTCGTGGGTGTTCAAGGGGATTCAATTCCCACGTGCGATGTCCAGAGC TCTAGTTGATGGGAGTATCGTTGATTCCTCGAGATATTGACCCAACGATT CCTCGAGGGACTCGGACGGTCGTGCTAAGTAGCCCTGCTGCTTTATATAG CGATGTAGCTCATTTTCCTGGCATTATCGCCGACTTAACGGTTGGTCTCT TCAACCGATTAACAGAGGTGTGGTGTCATCCGCAGCACCGGGACCGACGA GCTCGACGAGCATACCCAAGACTTTCGACCATCCCACATGGGCTGTAAAG AAGCTCTTATCCGTGACCAGACTTGATCAGGTGGGAAACACCTACTCGAG TATGTTGAGATACCCTGGTCGGTTTACCTCTCTAAACAAAATATAATTAT TGGTGCTACGATGCAGTTGATGAGATTGGTAACCTGGTACATTTGAGTTC CTTCGTGGATAGAAATACAATAAACCAAGAAAAAATGTTGCACTACTGGC ACTACCGTCGACAAGAGCTTCGTTCGTCATTTTCGAGTCGTATATCTTTT TATCGTAGACTACGCTCGCCGTGTTCTAGCCGGAATCAGCTTCACCATAG AGGTTTCGTGCAATGGTTCTAAGTTCTTGCGCATTCACGGGATGGTTATT TCGCGACGAACAGCTTTCTTGACATCTCGTGTATTCTCGTAGCTGTCGAT TCATGTAAAACGATATCACCATACGCGAACTAGGCATGTCCACAGCTGAT CGGAGTCATTTGACGGTTGCTTGATCCATTGAATTTCGGGCATGACGATG ACGGCCGCACTTGCCTTCCAGATACCACCCTTTGAAGACCGTTTGCCAGA GGTGGCCATCGTAGGGCGATCAAACGTAGGCAAGTCTACTCTTCTCAACG CGCTCTTGGGGATGAAGAAGCACCCGCTTGAACGGGCCAGTGTGTCGGAA ACGTGAGCTGACTGAGGCGGTAGTGAAGCAATCCTTTCTCGCTTTATTCG AAGTACCGTTATGCAGAATAGGCGGCGACGGTTTGTTCCGCTCTTACATT GCGACCAAAGTTTTGTTGTGCTCTTCGACGATTCTGAAACCTTACTTGCG GCATAATGCACCCTTTGTTAGGGCTTTTCTTATTCCTCGAGTCGGCGTTG TGATACGGGTGCGGGATGCAAATGAATGTGGTCGTGGGCGGTTCTAAACT AGCTGCAGCAGATGTTGCAATTGGAATCTCTATCATATGGTTTGCGGTGG TCGATGGCGATGTGAAGCAGAAAAAATAAATCCAAGCCTAACGAGGGAAC GAAGAGCCCCGTTCCGCCTTGCCGTGACGTTTTCGATTCAAGTGTATTTA TATTTGGTTTTTGTGTTGTCTCTGCCCTCGACTCGTTTCCGATCGCATTG TGCCCCAACTCGCTGCACAGTCCTGGAGAAACGCGATCGCTCGATTTTTT CAGACTTGGAAGAGGCAAAAGGTCAGAGTGACGCGAGAAAAAGCGCATGC TCGAGGCATGCGTGCGTGCGTGTCTGCCCGACGCATTTTTTTTCTTGTAC AAGGGTTGTTGTTGTTGTTGGTCACGCTTTCAGCAGAGTAAGATCAACCG TATTTGGTGGAAACGGTCGGAGTTGCGACCATGCTGTTGTTGCCCTACCG TCCTAGTGAAATCATGCCTTCCTTGAGGTGATTTAAGGCAAGGCTTGACT TGCATCTAATCTATGTTGCTTCTTACGATTCAGAAAAGGGAAATGTGTCC AATCCCTCTTGGTAGGAATGTCAAGGACGAAATTTTCTACTATCCACAAC GAAGTTACCCCCATTTCCTCTGGCGCTTGTAACGGCCAAGAGCAAGACGC GATTCGATCCCAATGCCATACCCACCATAGGAGTGTGTCGAGCATTCCCA TGTGCTTGACTTCTGAAACGCAAGCAAGGATGATCGTGCGCACGTGATTC GGCGCATAGGGCTAAACTGATTCTTGCGGATATGCCCGGATATGGCTTCG CCTACGCGCAAAAAGCTCAAAGAGACGACTGGAAGGGGTTGGTGAGAGCC CAGTTTTTTTTCGTTTTTTTTCTTTTAGGGTCTGCTGAAGCGACTTGAAG AGTGCAATGAGTGCTGAAATGCTTTATGTGGCTTTATGGGGGCTTCTATG TCTACTATTTTTGCCAGGGTCCTGGTTATGTTCGTTCTGCATTCGGCATG CCCTATTCATGCATGATCGCGTCAATAATCCTCAGATGGTCGCATCTCAC TCCTTCAGCCGTTAGCATTACATGCCATTTCTCTTCATCATCTAGTCACA TATCTTGCCGTGGCCGTACACTAATATTGTACCAAATGACCCGGACGCCA CGGGGTCTCTGTATGATGTTCCTTGCACTTGGCGCGGCCTCAGATGATGG CTTACTTGCGGGGGCGAGGAATACCTCTCAAGGTGAGAAACGCCGACGTG CTCCACCATCCTCGAATTCACGTAATTTGGTAGGTTGGTAGGTTGGCTTT ATGCCGCCACGACGGCGATGATTTAGAATCCCAACAAAGACTCGTCTAGC AAGGGTTGAAAGCGAGAGAAAAGATATTGATGCCAACACGGCATGTTCTT GGACGACCCTTCGTCGTCTATTCCACCGGTGCGATGCAACGTAACGCTGC GCGGAACTCAGCGAATAATGTTGCTGCTGGACGCGAGACACGGCTTTAAG AAGCTCGATATAGAGTTCCTGGAGCTCCTGTATGATCCGAAAGGACTTTC CCCGCTTGGTGAGTCAGAATCGTACCGAAGGCGTCGCCACCCAAGGAGTC TTGCTTGAGTCATGATACGTACGTTACTGCAGCAAACTGGAATCAGTGTT TTCGTGCCGCTCCCAAACCCCGCCGTGCTTGCTTGGAGGAGGTCAACTCG TCATGTTCGCTTGCGTGGACGAGTTACACTTTTTCACATGAGCCACAGGG GAGGAATTTCAATCTCTTGAGCACCCACCCCACCTCCATTAATTCCGTTA TAAACAGCAAAACAAAAACATGTCATTTTCGTGACGGGGCAGGCAAATAT CGCCCGCCAAAGATCCAGGTCCTGTTGACCAAGTGCGACCTGGTGAAGCG GATTGATTTGGCCCGTAGGGTGTCTCTTGTGCGGCAACAACTTGATGAGG TATGAGGTTCTCGATCTTGTGGGAGCGCAGCAGGATCCAACTCGCGATGA TGAGGACATACACTTATGGTGAACCTCATGGTGACAACCCTAGCCCTTCC TTGGGCAAACAGCTCTGCATCCGTTTGTAATGGTTGTCGGTATGTCAGGT GTCGCGGCGGCAGACAAACCTTCCTACCATGATGCTGAGTGCTTTGAAGG GGAGGGGACTGACAGAGCTCCAGCGGGAGTTGGCCGCTCTAGACCCC
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Coding sequence (CDS) from alignment at H-elongata_contig13768:2656..7252-

>mRNA_H-elongata_contig13768.2647.1 ID=mRNA_H-elongata_contig13768.2647.1|Name=mRNA_H-elongata_contig13768.2647.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2070bp|location=Sequence derived from alignment at H-elongata_contig13768:2656..7252- (Himanthalia elongata Himel1 dioecious)
ATGAACTTGGCTGTGCTAGCCAGATCAGGGGTGGTGCGATGTCGCCACTT
GCTGGCCTGCCCAAGCGCTGCCGCTCCTCGTTTAGCTTGTCCACGTTATC
GATATCCTGGCCAGCTGTTTGTTGCGCTGTCTGGAGCATCTCTTTACAAT
GTGAGATCCTTCTCCGGGGAGGCATCCGGCGGGGAGATAAGTAAGCGGAA
GCAGTTCAAACAGATGAACTTGGCTGTGCTAGCCAGATCAGGGGTGGTGC
GATGTCGCCACTTGCTGGCCTGCCCAAGCGCTGCCGCTCCTCGTTTAGCT
TGTCCACGTTATCGATATCCTGGCCAGCTGTTTGTTGCGCTGTCTGGAGC
ATCTCTTTACAATGTGAGATCCTTCTCCGGGGAGGCATCCGGCGGGGAGA
TAAGTAAGCGGAAGCAGTTCAAACAGATCACCGTGGACCCGAAAATCATT
CGGCACCTGGATGCACTGGGTTTGGGGATGGAAAAGAAGAAGGTCGAGAG
GGGTAGGAAAATCCGTCTCTACGAAAGATCACCGTGGACCCGAAAATCAT
TCGGCACCTGGATGCACTGGGTTTGGGGATGGAAAAGAAGAAGGTCGAGA
GGGGTAGGAAAATCCGTCTCTACGAAAGAGGTGTGGTGTCATCCGCAGCA
CCGGGACCGACGAGCTCGACGAGCATACCCAAGACTTTCGACCATCCCAC
ATGGGCTGTAAAGAAGCTCTTATCCGTGACCAGACTTGATCAGAGGTGTG
GTGTCATCCGCAGCACCGGGACCGACGAGCTCGACGAGCATACCCAAGAC
TTTCGACCATCCCACATGGGCTGTAAAGAAGCTCTTATCCGTGACCAGAC
TTGATCAGATACCACCCTTTGAAGACCGTTTGCCAGAGGTGGCCATCGTA
GGGCGATCAAACGTAGGCAAGTCTACTCTTCTCAACGCGCTCTTGGGGAT
GAAGAAGCACCCGCTTGAACGGGCCAGTGTGTCGGAAACATACCACCCTT
TGAAGACCGTTTGCCAGAGGTGGCCATCGTAGGGCGATCAAACGTAGGCA
AGTCTACTCTTCTCAACGCGCTCTTGGGGATGAAGAAGCACCCGCTTGAA
CGGGCCAGTGTGTCGGAAACTCCTGGAGAAACGCGATCGCTCGATTTTTT
CAGACTTGGAAGAGGCAAAAGTCCTGGAGAAACGCGATCGCTCGATTTTT
TCAGACTTGGAAGAGGCAAAAGGGCTAAACTGATTCTTGCGGATATGCCC
GGATATGGCTTCGCCTACGCGCAAAAAGCTCAAAGAGACGACTGGAAGGG
GTTGGGCTAAACTGATTCTTGCGGATATGCCCGGATATGGCTTCGCCTAC
GCGCAAAAAGCTCAAAGAGACGACTGGAAGGGGTTGATGATGGCTTACTT
GCGGGGGCGAGGAATACCTCTCAAGATGATGGCTTACTTGCGGGGGCGAG
GAATACCTCTCAAGCGAATAATGTTGCTGCTGGACGCGAGACACGGCTTT
AAGAAGCTCGATATAGAGTTCCTGGAGCTCCTGTATGATCCGAAAGGACT
TTCCCCGCTTGCGAATAATGTTGCTGCTGGACGCGAGACACGGCTTTAAG
AAGCTCGATATAGAGTTCCTGGAGCTCCTGTATGATCCGAAAGGACTTTC
CCCGCTTGGCAAATATCGCCCGCCAAAGATCCAGGTCCTGTTGACCAAGT
GCGACCTGGTGAAGCGGATTGATTTGGCCCGTAGGGTGTCTCTTGTGCGG
CAACAACTTGATGAGGCAAATATCGCCCGCCAAAGATCCAGGTCCTGTTG
ACCAAGTGCGACCTGGTGAAGCGGATTGATTTGGCCCGTAGGGTGTCTCT
TGTGCGGCAACAACTTGATGAGGTGTCGCGGCGGCAGACAAACCTTCCTA
CCATGATGCTGAGTGCTTTGAAGGGGAGGGGACTGACAGAGCTCCAGCGG
GAGTTGGCCGCTCTAGACCCCGTGTCGCGGCGGCAGACAAACCTTCCTAC
CATGATGCTGAGTGCTTTGAAGGGGAGGGGACTGACAGAGCTCCAGCGGG
AGTTGGCCGCTCTAGACCCC
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