mRNA_H-elongata_contig137220.2619.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig137220.2619.1 vs. uniprot
Match: D7FU81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU81_ECTSI) HSP 1 Score: 87.8 bits (216), Expect = 7.040e-19 Identity = 42/47 (89.36%), Postives = 43/47 (91.49%), Query Frame = 1
Query: 16 YGSVFEAAVDQMFRMSNLTSEHKFLDIGCGIGSIVLQAAAWAGCQAA 156
YGSVFEAAVD MFR S LT+ HKFLDIGCGIGSIVLQAAAWAGCQAA
Sbjct: 592 YGSVFEAAVDLMFRKSKLTANHKFLDIGCGIGSIVLQAAAWAGCQAA 638
BLAST of mRNA_H-elongata_contig137220.2619.1 vs. uniprot
Match: A0A6H5KPQ4_9PHAE (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPQ4_9PHAE) HSP 1 Score: 68.9 bits (167), Expect = 8.580e-13 Identity = 32/36 (88.89%), Postives = 33/36 (91.67%), Query Frame = 1
Query: 49 MFRMSNLTSEHKFLDIGCGIGSIVLQAAAWAGCQAA 156
MFR S LT+ HKFLDIGCGIGSIVLQAAAWAGCQAA
Sbjct: 1 MFRNSKLTANHKFLDIGCGIGSIVLQAAAWAGCQAA 36
BLAST of mRNA_H-elongata_contig137220.2619.1 vs. uniprot
Match: D7FU72_ECTSI (Histone-lysine N-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU72_ECTSI) HSP 1 Score: 61.6 bits (148), Expect = 8.360e-10 Identity = 35/67 (52.24%), Postives = 40/67 (59.70%), Query Frame = 1
Query: 1 GMRLRYGSVFEAAVDQMFRMSNLTSEHKFLDIGCGIGSIVLQAAAWAGC------------QAAVRL 165
G + RYGS+ A D +FR+ LTS FLDIG G+G IV QAAAWAGC QAAVRL
Sbjct: 12 GRQGRYGSICAGAADFIFRICGLTSHDCFLDIGSGLGQIVTQAAAWAGCRSLGVEVVRDRHQAAVRL 78
BLAST of mRNA_H-elongata_contig137220.2619.1 vs. uniprot
Match: A0A6H5KK39_9PHAE (DOT1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK39_9PHAE) HSP 1 Score: 57.0 bits (136), Expect = 4.930e-8 Identity = 32/62 (51.61%), Postives = 36/62 (58.06%), Query Frame = 1
Query: 16 YGSVFEAAVDQMFRMSNLTSEHKFLDIGCGIGSIVLQAAAWAGC------------QAAVRL 165
YGS+ A D +FR+ LT FLDIG G+G IV QAAAWAGC QAAVRL
Sbjct: 373 YGSICAGAADFIFRICGLTCHDCFLDIGSGLGQIVTQAAAWAGCKSLGVEVVRDRHQAAVRL 434
BLAST of mRNA_H-elongata_contig137220.2619.1 vs. uniprot
Match: W7TUH3_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUH3_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 6.040e-7 Identity = 23/51 (45.10%), Postives = 34/51 (66.67%), Query Frame = 1
Query: 1 GMRLRYGSVFEAAVDQMFRMSNLTSEHKFLDIGCGIGSIVLQAAAWAGCQA 153
GMR YG++ + +M R + +T + +FLDIG G+G++VLQ AA GC A
Sbjct: 383 GMRTMYGAIRAPLIQEMIRFAGVTRQDRFLDIGSGLGTVVLQMAAVTGCHA 433
BLAST of mRNA_H-elongata_contig137220.2619.1 vs. uniprot
Match: I1CNU1_RHIO9 (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1CNU1_RHIO9) HSP 1 Score: 53.5 bits (127), Expect = 7.740e-7 Identity = 20/46 (43.48%), Postives = 32/46 (69.57%), Query Frame = 1
Query: 16 YGSVFEAAVDQMFRMSNLTSEHKFLDIGCGIGSIVLQAAAWAGCQA 153
YG +F + +D+ + + + S F+D+GCGIG++VLQ AA GC+A
Sbjct: 153 YGEIFPSLIDEFIKKTQINSNSVFMDLGCGIGNVVLQVAAQTGCKA 198
BLAST of mRNA_H-elongata_contig137220.2619.1 vs. uniprot
Match: A0A1X2IYU1_9FUNG (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IYU1_9FUNG) HSP 1 Score: 51.2 bits (121), Expect = 5.320e-6 Identity = 20/45 (44.44%), Postives = 32/45 (71.11%), Query Frame = 1
Query: 16 YGSVFEAAVDQMFRMSNLTSEHKFLDIGCGIGSIVLQAAAWAGCQ 150
YG + + V++ +N+TS+ F+D+GCGIG++VLQ AA GC+
Sbjct: 163 YGEINASLVNEFIAKTNITSKSVFMDLGCGIGNVVLQVAAQTGCE 207
BLAST of mRNA_H-elongata_contig137220.2619.1 vs. uniprot
Match: A0A163M7B5_ABSGL (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A163M7B5_ABSGL) HSP 1 Score: 51.2 bits (121), Expect = 5.390e-6 Identity = 20/45 (44.44%), Postives = 32/45 (71.11%), Query Frame = 1
Query: 16 YGSVFEAAVDQMFRMSNLTSEHKFLDIGCGIGSIVLQAAAWAGCQ 150
YG + + V++ +N+TS+ F+D+GCGIG++VLQ AA GC+
Sbjct: 290 YGEINASLVNEFITKTNMTSKSVFMDLGCGIGNVVLQVAAQTGCE 334
BLAST of mRNA_H-elongata_contig137220.2619.1 vs. uniprot
Match: A0A1X2G876_9FUNG (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2G876_9FUNG) HSP 1 Score: 50.1 bits (118), Expect = 1.350e-5 Identity = 20/45 (44.44%), Postives = 30/45 (66.67%), Query Frame = 1
Query: 16 YGSVFEAAVDQMFRMSNLTSEHKFLDIGCGIGSIVLQAAAWAGCQ 150
YG + V + +N+TS+ F+D+GCGIG++VLQ AA GC+
Sbjct: 125 YGEINAILVREFIEQTNITSKSVFMDLGCGIGNVVLQVAAQTGCE 169
BLAST of mRNA_H-elongata_contig137220.2619.1 vs. uniprot
Match: I1BTM3_RHIO9 (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1BTM3_RHIO9) HSP 1 Score: 50.1 bits (118), Expect = 1.390e-5 Identity = 20/46 (43.48%), Postives = 31/46 (67.39%), Query Frame = 1
Query: 16 YGSVFEAAVDQMFRMSNLTSEHKFLDIGCGIGSIVLQAAAWAGCQA 153
YG + + V + +N+ S+ F+D+GCGIG++VLQ AA GC+A
Sbjct: 819 YGEINPSLVKEFITKTNINSDSVFMDLGCGIGNVVLQVAAQTGCEA 864 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig137220.2619.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig137220.2619.1 >prot_H-elongata_contig137220.2619.1 ID=prot_H-elongata_contig137220.2619.1|Name=mRNA_H-elongata_contig137220.2619.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=56bp MRLRYGSVFEAAVDQMFRMSNLTSEHKFLDIGCGIGSIVLQAAAWAGCQAback to top mRNA from alignment at H-elongata_contig137220:140..310+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig137220.2619.1 ID=mRNA_H-elongata_contig137220.2619.1|Name=mRNA_H-elongata_contig137220.2619.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=171bp|location=Sequence derived from alignment at H-elongata_contig137220:140..310+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig137220:140..310+ >mRNA_H-elongata_contig137220.2619.1 ID=mRNA_H-elongata_contig137220.2619.1|Name=mRNA_H-elongata_contig137220.2619.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=336bp|location=Sequence derived from alignment at H-elongata_contig137220:140..310+ (Himanthalia elongata Himel1 dioecious)back to top |