mRNA_H-elongata_contig13465.2454.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig13465.2454.1
Unique NamemRNA_H-elongata_contig13465.2454.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig13465.2454.1 vs. uniprot
Match: D7FLF3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLF3_ECTSI)

HSP 1 Score: 305 bits (780), Expect = 3.790e-98
Identity = 144/180 (80.00%), Postives = 168/180 (93.33%), Query Frame = 1
Query:    1 DFPELAGEISGMDDPAEAPWRLKAERIIREQVKICGLTCYDILWTFHRLEVTVTRAPDDGPIEDSAYVDSDKLMEAIKRVNTALEEREEELFVLGRHELIVATPGSKDVLTTNKEFKAFKGFDIIVKTGGPFKNKRQLHGKLLERTFDELVINQSGRTVRVPLALVDEVRLPPALVESGD 540
            DFPE+AG I+GMDDPA+APWRL+AE+I+R+QV+ CGLTCYDILWTFHRLEVTVTRA  DGPIE++AYVDSDKLM+AIK VN ALE REEELFVLGRHEL+VATPG+KDVLTT+K+FKA+KGF++IVK GGPFK KR+L GKLLERTFDEL+I ++GR VR+PLALVDEVRLPPALVE+GD
Sbjct:  180 DFPEVAGVIAGMDDPADAPWRLEAEKIVRDQVQACGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKKRELKGKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPALVEAGD 359          
BLAST of mRNA_H-elongata_contig13465.2454.1 vs. uniprot
Match: A0A836C944_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C944_9STRA)

HSP 1 Score: 237 bits (605), Expect = 1.060e-71
Identity = 115/182 (63.19%), Postives = 147/182 (80.77%), Query Frame = 1
Query:    1 DFPELAGEISGMDDPAEAPWRLKAERIIREQVKICGLTCYDILWTFHRLEVTVTRA--PDDGPIEDSAYVDSDKLMEAIKRVNTALEEREEELFVLGRHELIVATPGSKDVLTTNKEFKAFKGFDIIVKTGGPFKNKRQLHGKLLERTFDELVINQSGRTVRVPLALVDEVRLPPALVESGD 540
            ++PE+AG+  GMDDP +APWR +AE IIR +V+  GL CYDI+W+FH+LEVTVTR   P+D   E++ YVDSD LM+AI+ VN ALE+ EE L+VLGRHELI+ATPG+KD+LTT++EFKAFKGFD++V TG     +R++ GKL ERTFDELV+ Q GR VR+PLALVDEVRLP A +E G+
Sbjct:  190 EWPEVAGDTGGMDDPPDAPWRREAEEIIRREVEETGLNCYDIMWSFHKLEVTVTRGDLPEDS--EEAGYVDSDALMKAIRAVNQALEQEEERLWVLGRHELIIATPGAKDILTTDREFKAFKGFDVVVLTGSTLNVQREVMGKLHERTFDELVLMQKGRKVRIPLALVDEVRLPDAKMEPGE 369          
BLAST of mRNA_H-elongata_contig13465.2454.1 vs. uniprot
Match: A0A4D9D4Q5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4Q5_9STRA)

HSP 1 Score: 144 bits (362), Expect = 7.350e-36
Identity = 77/195 (39.49%), Postives = 110/195 (56.41%), Query Frame = 1
Query:    4 FPELAGEISGMDDPAEAPWRLKAERIIREQVKICGLTCYDILWTFHRLEVTVTRAPDDGPIE-------DSAYVDSDKLMEAIKRVNTALEEREEELFVLGRHELIVATPGSKDVLTTNKEFKAFKGFDIIVKTGGPFKNKRQLH---GKLLERTFDELVINQSGRTVRVPLALVDEVRLPPALVESGDTSILSK 558
             PE  GE  GMDDP +APWRL+AE +IR  V   G   YD+ W  H + V +TR  D G +E       D+  + SD+++E  + V  AL   +  L VL R  L V TPG+KDVLTT +EF+AF+G+++ V    P       +   G+LLER     ++N  G+ V +P  +V EVRLP A+ E+ D  ++ +
Sbjct:  117 IPEYGGEFLGMDDPLDAPWRLQAEEVIRGAVTEAGYHTYDVTWHLHHVNVDITRQ-DGGNVESEGEGVADAGSLSSDEIVEVTRAVEEALLPHDNHLRVLQRFHLCVGTPGAKDVLTTEREFQAFRGYEVQVSVTNPINESPTPNVRVGRLLERNPMHTILNVKGKNVTIPTGMVVEVRLPSAMHEADDFEVMDE 310          
BLAST of mRNA_H-elongata_contig13465.2454.1 vs. uniprot
Match: W7TJE5_9STRA (Ribosome maturation factor rimp n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJE5_9STRA)

HSP 1 Score: 141 bits (355), Expect = 4.640e-34
Identity = 76/195 (38.97%), Postives = 109/195 (55.90%), Query Frame = 1
Query:    4 FPELAGEISGMDDPAEAPWRLKAERIIREQVKICGLTCYDILWTFHRLEVTVTRAPDDGPIE-------DSAYVDSDKLMEAIKRVNTALEEREEELFVLGRHELIVATPGSKDVLTTNKEFKAFKGFDIIVKTGGPFKNKRQLH---GKLLERTFDELVINQSGRTVRVPLALVDEVRLPPALVESGDTSILSK 558
             PE  GE  GMDDP +APWRL AE +IR  V   G   YD+ W  H + V +TR  D G +E       D+  + SD+++E  + V  AL   +  L +L R  L V TPG+KDVLTT +EF+AF+G+++ V    P       +   G+LLER     ++N  G+ V +P  +V EVRLP A+ E+ D  ++ +
Sbjct:  227 IPEYGGEFLGMDDPLDAPWRLHAEDVIRGAVTEAGYHTYDVTWHLHHVNVDITRQ-DVGNVENEGEGVADAGSLSSDEIVEVTRAVEEALLPHDNHLRILQRFHLCVGTPGAKDVLTTEREFQAFRGYEVQVSVTNPINESPTPNVRVGRLLERNPMHTILNVKGKNVTIPTGMVVEVRLPSAMHEADDFEVMEE 420          
BLAST of mRNA_H-elongata_contig13465.2454.1 vs. uniprot
Match: A0A7S2SW06_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW06_9STRA)

HSP 1 Score: 132 bits (333), Expect = 3.350e-32
Identity = 73/177 (41.24%), Postives = 110/177 (62.15%), Query Frame = 1
Query:   10 ELAGEISGMDDPAEAPWRLKAERIIREQVK-ICGLTCYDILWTFHRLEVTVTRAPDDGPIEDSAYVDSDKLMEAIKRVNTALEEREEELFVLGRHELIVATPGSKDVLTTNKEFKAFKGFDIIVKTGGP--FKNKRQLHGKLLERTFDELVINQSGRTVRVPLALVDEVRLPPALVE 531
            ++ G ++G+DDP +  WRLKAE ++R  V+ + G+  YD+ W    L+V + +  D+G   D   V++     A + +  ALE  +EEL +L RHEL V++ G+K++L + +EF+AFKGFD++VKT  P     +  L+GKL+ R   E  IN  GR VR+P  LV+EVRLP A  E
Sbjct:  121 KVYGIMNGLDDPRDVFWRLKAEELVRGAVRPLAGVRIYDVCWNIATLQVLLEQETDEGGAVDLKVVET-----AHRAILDALEAHDEELQILTRHELEVSSKGAKNILDSEREFEAFKGFDVVVKTLAPDGIDKREPLYGKLVGRDVHETTINIRGRPVRIPNHLVEEVRLPEANEE 292          
BLAST of mRNA_H-elongata_contig13465.2454.1 vs. uniprot
Match: A0A7S1TZY1_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZY1_9STRA)

HSP 1 Score: 113 bits (282), Expect = 3.830e-25
Identity = 75/187 (40.11%), Postives = 105/187 (56.15%), Query Frame = 1
Query:   19 GEISGMDDPAEAPWRLKAERIIREQVK--ICGLTCYDILWTFHRLEVTVTRAPDDGPIEDSAYVDSDKLMEAIKR-VNTALEEREEEL---FVLGRHELIVATPGSKDVLTTNKEFKAFKGFDIIVKTGGPFKNK-------RQLHGKLLERTFDELVINQSGRTVRVPLALVDEVRLPPALVESGD 540
            G   GMDDP +APWRL+A   I E VK         D+LW F  +++TVT      P ED+    S  ++E + R ++  L   E EL     L  H L V TPG+ +V+TT ++F+A+KGF + V T G  K+        + L G L  RT +E+ +NQ GR V+VP+A+V EVRLP   +E+GD
Sbjct:   96 GPALGMDDPLDAPWRLEAAAEIEELVKEKYPDAQAVDVLWAFSNVQITVT------PKEDANVPLSSAVIEMLTRAISDDLFPAEPELAHDHWLTMHALSVCTPGASNVITTQEQFEAYKGFQVDVVTLGMPKSDGFAGVPGKTLTGTLHGRTTEEVHLNQKGRIVKVPIAMVSEVRLPEPELENGD 276          
BLAST of mRNA_H-elongata_contig13465.2454.1 vs. uniprot
Match: A0A7S2SV25_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV25_9STRA)

HSP 1 Score: 108 bits (270), Expect = 1.760e-24
Identity = 62/156 (39.74%), Postives = 94/156 (60.26%), Query Frame = 1
Query:   73 ERIIREQVK-ICGLTCYDILWTFHRLEVTVTRAPDDGPIEDSAYVDSDKLMEAIKRVNTALEEREEELFVLGRHELIVATPGSKDVLTTNKEFKAFKGFDIIVKTGGP--FKNKRQLHGKLLERTFDELVINQSGRTVRVPLALVDEVRLPPALVE 531
            + ++R  V+ + G+  YD+ W    L+V + +  D+G   D   V++     A + +  ALE  +EEL +L RHEL V++ G+K++L + +EF+AFKGFD++VKT  P     +  L+GKL+ R   E  IN  GR VR+P  LV+EVRLP A  E
Sbjct:   12 QELVRGAVRPLAGVRIYDVCWNIATLQVLLEQETDEGGAVDLKVVET-----AHRAILDALEAHDEELQILTRHELEVSSKGAKNILDSEREFEAFKGFDVVVKTLAPDGIDKREPLYGKLVGRDVHETTINIRGRPVRIPNHLVEEVRLPEANEE 162          
BLAST of mRNA_H-elongata_contig13465.2454.1 vs. uniprot
Match: A0A7S1DE94_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DE94_CYCTE)

HSP 1 Score: 106 bits (264), Expect = 3.120e-24
Identity = 53/117 (45.30%), Postives = 75/117 (64.10%), Query Frame = 1
Query:  187 EDSAYVDSDKLMEAIKRVNTALEEREEELFVLGRHELIVATPGSKDVLTTNKEFKAFKGFDIIVKTGGPFKNKRQLHGKLLERTFDELVINQSGRTVRVPLALVDEVRLPPALVESG 537
            + +  VD+ K+    K +   L+ +E  L +L RHELI+ATPG+ D L T ++F A++GFD+IV+T  PF + R L GKL+ER   +L+I + GR V +PL  V  VRLPPA  E G
Sbjct:   13 DGAMVVDTSKISVIAKYILKGLDSQEHRLRILDRHELILATPGAPDTLETQRQFDAYRGFDVIVETVDPFNSNRVLTGKLVERNSMDLIIRKKGRMVTIPLNFVSSVRLPPAKREKG 129          
BLAST of mRNA_H-elongata_contig13465.2454.1 vs. uniprot
Match: A0A7S2D135_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D135_9STRA)

HSP 1 Score: 108 bits (271), Expect = 1.020e-23
Identity = 59/167 (35.33%), Postives = 95/167 (56.89%), Query Frame = 1
Query:   19 GEISGMDDPAEAPWRLKAERIIREQVK-ICGLTCYDILWTFHRLEVTVTRAPDDGPIEDSAYVDSDKLMEAIKRVNTALEEREEELFVLGRHELIVATPGSKDVLTTNKEFKAFKGFDIIVKTGGPFKNKRQ-LHGKLLERTFDELVINQSGRTVRVPLALVDEVRL 513
            G+++G+DDP +  WR++ + +IRE +  + G++ YDI W    L V +        +ED        +++  K +   LE  ++EL +L RH L V++ G  DVLT  ++F  FKGF++ V T   F ++R  + G+L+ R   E  INQ GR V++P   V+EVRL
Sbjct:  114 GDMNGLDDPRDVEWRIRGQDLIREAIAPLNGISVYDITWNIGDLTVFIENEESGVSMED--------IIDCTKAIQDTLEPFDDELEILSRHTLEVSSKGIDDVLTAERQFITFKGFEVAVSTISTFSDRRAPILGRLVGRDVHETTINQKGRMVKIPNFYVEEVRL 272          
BLAST of mRNA_H-elongata_contig13465.2454.1 vs. uniprot
Match: A0A7S2PI76_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PI76_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.720e-23
Identity = 66/187 (35.29%), Postives = 95/187 (50.80%), Query Frame = 1
Query:    7 PELAGEISGMDDPAEAPWRLKAERIIREQVKICGLTCYDILWTFHRLEVTVT--------------------------RAPDDGPIEDSAYVDSDKLMEAIKRVNTALEEREE-ELFVLGRHELIVATPGSKDVLTTNKEFKAFKGFDIIVKTGGPFKNKRQLHGKLLERTFDELVINQSGRTVRVP 486
            P   G+  G DDP +APWR++ E+IIR+  +  G    D+ W      VT++                          R   D  + + A VD   +      +  AL+E E+ +L VL RHE+IV +PG  +VL T ++F AFKGFD+IV+T  P  + R+L GKLLERT  +  I Q G+ V +P
Sbjct:   38 PWRRGDPDGCDDPMDAPWRIEGEQIIRDAAESVGAVVEDVTWGMAMCTVTISDTTGVKKDTSEYLEERKKRDDEYPWMREERDAVVTEDA-VDMSGVGVVAGTIIEALQEAEDRDLDVLSRHEIIVTSPGVSNVLETQRQFDAFKGFDVIVQTIDPLGSNRRLEGKLLERTALDTFITQKGKKVTIP 223          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13465.2454.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF3_ECTSI3.790e-9880.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C944_9STRA1.060e-7163.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9D4Q5_9STRA7.350e-3639.49Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TJE5_9STRA4.640e-3438.97Ribosome maturation factor rimp n=1 Tax=Nannochlor... [more]
A0A7S2SW06_9STRA3.350e-3241.24Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1TZY1_9STRA3.830e-2540.11Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2SV25_9STRA1.760e-2439.74Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1DE94_CYCTE3.120e-2445.30Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S2D135_9STRA1.020e-2335.33Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S2PI76_9STRA1.720e-2335.29Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13465contigH-elongata_contig13465:5916..8168 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score288.5
Seed ortholog evalue2.1e-75
Seed eggNOG ortholog2880.D7FLF3
EggNOG OGs2E9GY@1,2SFUT@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRibosome maturation factor RimP, C-terminal
Ec32 orthologEc-12_007950.1
Exons4
Model size1122
Cds size528
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13465.2454.1prot_H-elongata_contig13465.2454.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig13465 6477..8135 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929799.7792234-UTR-H-elongata_contig13465:5915..64761622929799.7792234-UTR-H-elongata_contig13465:5915..6476Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13465 5916..6476 -
1691679162.136677-UTR-H-elongata_contig13465:5915..64761691679162.136677-UTR-H-elongata_contig13465:5915..6476Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13465 5916..6476 -
1622929799.8420463-UTR-H-elongata_contig13465:8135..81681622929799.8420463-UTR-H-elongata_contig13465:8135..8168Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13465 8136..8168 -
1691679162.2041056-UTR-H-elongata_contig13465:8135..81681691679162.2041056-UTR-H-elongata_contig13465:8135..8168Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13465 8136..8168 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929799.79443-CDS-H-elongata_contig13465:6476..66541622929799.79443-CDS-H-elongata_contig13465:6476..6654Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13465 6477..6654 -
1691679162.1584256-CDS-H-elongata_contig13465:6476..66541691679162.1584256-CDS-H-elongata_contig13465:6476..6654Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13465 6477..6654 -
1622929799.809248-CDS-H-elongata_contig13465:6803..69531622929799.809248-CDS-H-elongata_contig13465:6803..6953Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13465 6804..6953 -
1691679162.174095-CDS-H-elongata_contig13465:6803..69531691679162.174095-CDS-H-elongata_contig13465:6803..6953Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13465 6804..6953 -
1622929799.8195379-CDS-H-elongata_contig13465:7450..76141622929799.8195379-CDS-H-elongata_contig13465:7450..7614Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13465 7451..7614 -
1691679162.1850362-CDS-H-elongata_contig13465:7450..76141691679162.1850362-CDS-H-elongata_contig13465:7450..7614Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13465 7451..7614 -
1622929799.8297064-CDS-H-elongata_contig13465:8099..81351622929799.8297064-CDS-H-elongata_contig13465:8099..8135Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13465 8100..8135 -
1691679162.194632-CDS-H-elongata_contig13465:8099..81351691679162.194632-CDS-H-elongata_contig13465:8099..8135Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13465 8100..8135 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig13465.2454.1

>prot_H-elongata_contig13465.2454.1 ID=prot_H-elongata_contig13465.2454.1|Name=mRNA_H-elongata_contig13465.2454.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=176bp
MDDPAEAPWRLKAERIIREQVKICGLTCYDILWTFHRLEVTVTRAPDDGP
IEDSAYVDSDKLMEAIKRVNTALEEREEELFVLGRHELIVATPGSKDVLT
TNKEFKAFKGFDIIVKTGGPFKNKRQLHGKLLERTFDELVINQSGRTVRV
PLALVDEVRLPPALVESGDTSILSK*
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mRNA from alignment at H-elongata_contig13465:5916..8168-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig13465.2454.1 ID=mRNA_H-elongata_contig13465.2454.1|Name=mRNA_H-elongata_contig13465.2454.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2253bp|location=Sequence derived from alignment at H-elongata_contig13465:5916..8168- (Himanthalia elongata Himel1 dioecious)
GATTTCCCAGAGTTGGCGGGAGAAATTTCAGGGATGGACGATCCGGCAGA GGCACCGTGGCGACTGAAGGTAAAAATTATGTTATTGGCCCATGTAACGA TTCCTTAAAATCCAGTCGATAAAGCCATAGCTCCACAATTATTAGTTGCC ACCCGTATTTACTCGGGGCGGACCAAATATTACTACAGTTTCTTTGTATC TAGTTGTGTTTTTGAAGCATGCTGTTATCGAGGATATTTCACGAAGTTGT TTTATCACTGTTCGTAGATGAGAGAAGCATACCCTGACAGTGATGTTATT CCCTGGATCGTTATTTTGCACCCCAAGTGTCGGAGATATCTGCCATCCAT TTACTTGGCGCGCTTAGCTTCAGCTCCCGTGCCCCCCTGCAATGCCTGTA TAGATAGAGTGATAACACAATGAAAGATGTTTAAAATCCAAAAAGAGCGT GCCAAGACCAGGTCCTCCACTGTACGTGGTTGGGTGCCGGTTCGCGCGGT ACATCAATTGGTGTTTCCTTAAGCTTCTCCCGCGTTTGATGATGTGTACA ACAGGCTGAGAGGATAATTCGAGAACAAGTGAAGATATGTGGGCTCACGT GCTACGATATACTCTGGACATTCCATAGACTAGAAGTAACCGTGACAAGA GCACCAGACGATGGACCCATTGAGGATTCGGCATACGTGGATAGCGATAA ACTCATGGAAGCCATTAAGTGAGCGCCCGAAGTAAAAGTAATGGTTGATT TGCATTGTGAGACACCTTCCTCATATCCTTTCTATTTTATAAATATGTGC TAGACGCGCTGTCGATCATGTCCTATTAATAATTCGTGGAGGGCCGATCC AATCCGTTTGTCTAAAGGCCATGATTACGCCTACATAAAATCGGTTTTGC TTGCATCCCAAATTTCTTAGACTCGCAACGTGAAGGGAACAGGGCTGTGG TATTTATCCTTCGCGATGATTTAAGAGTTTCAGCGACCGATGCCGTGTTT TCAACTGACTAAATTTATATATCGCGTCTAATGGCTTCACCCGAAACAAC CTTCAAAGCTTGAAAATTCCATACGCGAATACTATGCTCTACTTCGACGA TTATTATTCTGGTTCTTACCCTAGTGAAGGTGCTGAGAGTTCTGAAAATA TATATTTCAACCGTCTAGCACAATCATGGGATGGCCATAGACGTTCCACA ATGCCTGGCAAGCAGGAGAGTCAACACTGCGTTAGAAGAGAGGGAGGAAG AGCTTTTCGTCTTGGGACGACATGAGCTCATTGTGGCAACACCCGGAAGC AAGGACGTATTAACAACAAACAAGGAATTTAAAGCATTTAAGGGATTCGA CATTATCGTAAAAACGTGAGCGTCTATAAGAACTAGATTGACGTGTTGTT ATTTATCGTAGATACAGTAGTGCCTCTTGTGTGCTATTGAAGGACGTGAA CTATTTACTCGGATCCTCACTCATGATAATTTTATGACATCGTCAACGTC TGCGCTCTTCACAGGGGAGGACCCTTCAAGAATAAGCGCCAGCTACACGG AAAGCTGCTTGAGCGCACTTTTGACGAGCTTGTGATAAATCAGTCAGGAC GCACCGTACGAGTTCCTTTGGCACTGGTTGATGAGGTTCGCCTCCCGCCA GCACTTGTTGAATCTGGAGACACAAGCATCTTAAGTAAGTAGTAGTAATG TCTTCCCAACTTAGGAGTTACTTTCGCTTTCGTGTGTCCCATATTTTGAA AGATTCCCTTGGCCGATATTGAAGAGGCCGCGCATGTCGAGAAGGTTACA TCGTGCGTTGGGCACATAGACGATTTCTCGGTAGACCAAACGCAACTCCG GCCCGCCATAGCAACGGCTTCACAGTTTATATTTCCTCGCATCGATCAGT TCCAGGTTCAATCGAGGAACTTTTCTTTCATCTTACAACAAACGGCAATT TTGCACCATGTATAAGGATTCCCTGTTAAAGATATCGCGAAATCTGCATG TTCTGAGTCTAATACCCCCCGTGACGGGGAGTTACGGGAGACACCGGCAC TGATGCCTCTTTTAAGGGTCAAACCGGGTTGCGCGGATAGTGCAAATTAA GATGTAATAAGCCATTTTTATTAGCTAGTTTCCTTAAATATACTACCGAA TGATTAACCCGCGTTATATATGTGTGTATATGTTGTCATTACACATAAGC AGAGCATGGATCAACCGGATTTGGTTATCTCCTTGTGGTCAGCTAAACAA GGG
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Coding sequence (CDS) from alignment at H-elongata_contig13465:5916..8168-

>mRNA_H-elongata_contig13465.2454.1 ID=mRNA_H-elongata_contig13465.2454.1|Name=mRNA_H-elongata_contig13465.2454.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1056bp|location=Sequence derived from alignment at H-elongata_contig13465:5916..8168- (Himanthalia elongata Himel1 dioecious)
ATGGACGATCCGGCAGAGGCACCGTGGCGACTGAAGATGGACGATCCGGC
AGAGGCACCGTGGCGACTGAAGGCTGAGAGGATAATTCGAGAACAAGTGA
AGATATGTGGGCTCACGTGCTACGATATACTCTGGACATTCCATAGACTA
GAAGTAACCGTGACAAGAGCACCAGACGATGGACCCATTGAGGATTCGGC
ATACGTGGATAGCGATAAACTCATGGAAGCCATTAAGCTGAGAGGATAAT
TCGAGAACAAGTGAAGATATGTGGGCTCACGTGCTACGATATACTCTGGA
CATTCCATAGACTAGAAGTAACCGTGACAAGAGCACCAGACGATGGACCC
ATTGAGGATTCGGCATACGTGGATAGCGATAAACTCATGGAAGCCATTAA
GAGAGTCAACACTGCGTTAGAAGAGAGGGAGGAAGAGCTTTTCGTCTTGG
GACGACATGAGCTCATTGTGGCAACACCCGGAAGCAAGGACGTATTAACA
ACAAACAAGGAATTTAAAGCATTTAAGGGATTCGACATTATCGTAAAAAC
GAGAGTCAACACTGCGTTAGAAGAGAGGGAGGAAGAGCTTTTCGTCTTGG
GACGACATGAGCTCATTGTGGCAACACCCGGAAGCAAGGACGTATTAACA
ACAAACAAGGAATTTAAAGCATTTAAGGGATTCGACATTATCGTAAAAAC
GGGAGGACCCTTCAAGAATAAGCGCCAGCTACACGGAAAGCTGCTTGAGC
GCACTTTTGACGAGCTTGTGATAAATCAGTCAGGACGCACCGTACGAGTT
CCTTTGGCACTGGTTGATGAGGTTCGCCTCCCGCCAGCACTTGTTGAATC
TGGAGACACAAGCATCTTAAGTAAGTAGGGGAGGACCCTTCAAGAATAAG
CGCCAGCTACACGGAAAGCTGCTTGAGCGCACTTTTGACGAGCTTGTGAT
AAATCAGTCAGGACGCACCGTACGAGTTCCTTTGGCACTGGTTGATGAGG
TTCGCCTCCCGCCAGCACTTGTTGAATCTGGAGACACAAGCATCTTAAGT
AAGTAG
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