mRNA_H-elongata_contig13221.2311.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13221.2311.1 vs. uniprot
Match: A0A075B0V5_ROZAC (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075B0V5_ROZAC) HSP 1 Score: 232 bits (591), Expect = 3.050e-65 Identity = 127/373 (34.05%), Postives = 218/373 (58.45%), Query Frame = 1
Query: 4 QWKKAIAREMDGQVARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCHLVAQGFRQVKGLHYEESSSPTPAQVSIRIVLSMITALGWEAWQLDVDMAYLEADVEEEIYVELPEAYRDSRKQ--IGLLKKAMYELIHTWLLW*KTFGIELAAKGFQRSQADS*MFRRILHGVVVVVIVAYVDDLLVASATKRDEEQAVRDVYSCFPIKDPGDASYYVGCHITRNA-GTLTFDQHQNIQTVAERFGVTKTSIIPSVAE-EKALSKSDSPQTDAEVDKMRQIPYRESVGALMLAATMTRPDILFAAHQLAKFNNNPGPTHWRAAQKALQYLWRTRDLRITCGGEPGGGTKLSAWVDADYGTCPDTRRSVSG 1110
+W+KA+ E + ++ G W+++E P + +G++ VFK K ++ G +EKYK LVAQGF+QVKG+ YEE+ SP SIRI+L++ +A QLDV AYL +++ E+Y++ P + +S K+ + LK+ +Y L W T L + G+ + + D ++ ++ +G +++ + YVDD+L+A+ E + + +KD G+A + +G IT+ GT + Q I+ + ++F +++ + I E K SK P E+++M +PYR ++G+L+ A+ TRPDI FA +K+ NNPG HW A++ ++YL T++ +T G P + + +VD+D+G+ DTRRSVSG
Sbjct: 113 EWRKAMQAEYNALMSNGTWELMELPPDRKAIGSKWVFKTKYNERGEVEKYKARLVAQGFKQVKGVDYEETFSPVAKLNSIRIILAIASAEKLHVHQLDVLTAYLNSEITHEVYMKQPTGFVESGKENLVCKLKRGLYGLKQGGYEWNITIDASLKSIGYVKCEKDWGIYTKVTNGKRILLAL-YVDDILLAAPDNNSIENEKHLLKQLYNMKDMGEAKWILGMEITKTPEGTYSLSQVNYIEKLLQKFNMSEANSITLPMEPNKQYSKDMCPHQPQEIEQMALVPYRSAIGSLLYASVATRPDITFAVSIASKYLNNPGQEHWSLAKRIMRYLLGTKNHGLTFQGSPDHNSIVQGYVDSDWGSDIDTRRSVSG 484
BLAST of mRNA_H-elongata_contig13221.2311.1 vs. uniprot
Match: A0A060SPD4_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SPD4_PYCCI) HSP 1 Score: 229 bits (584), Expect = 6.510e-62 Identity = 135/375 (36.00%), Postives = 215/375 (57.33%), Query Frame = 1
Query: 1 PQWKKAIAREMDGQVARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCHLVAQGFRQVKGLHYEESSSPTPAQVSIRIVLSMITALGWEAWQLDVDMAYLEADVEEEIYVELP--EAYRDSRKQIGLLKKAMYELIHTWLLW*KTFGIELAAKGFQRSQADS*MFRRILHGVVVVVIVAYVDDLLVASATKRDEEQAVRDVYSCFPIKDPGDASYYVGCHITRN--AGTLTFDQHQNIQTVAERFGVTKTSIIPSVAE-EKALSKSDSPQTDAEVDKMRQIPYRESVGALMLAATMTRPDILFAAHQLAKFNNNPGPTHWRAAQKALQYLWRTRDLRITCGGEPGGGTKLSAWVDADYGTCPDTRRSVSG 1110
P+W++AI E+D VA G W++V RP V+ ++ V + K + G I+KYK LVA+GF QV G+ Y ++ +P SIR++L++ GW A D + AYL + ++E++Y+E P A+ D + + L+KA+Y L W +T L GF R +AD +F + G ++V+ +VDD L+ +++R + + + + I D G S+ +G I+ + AGTL+ QH I+ + RF T + + + LSK+ P++ AEV +MR++PYRE++GALM AA TRPDI FA LA+F NPG HW A ++ +YL TR L + GG+ +L +V+AD G + RR+++G
Sbjct: 811 PKWQEAIKAELDSLVANGTWRIVPRPSSGNVVDSKWVLRVKKNAAGEIDKYKARLVARGFTQVYGVDYYDTFAPVAKLSSIRLLLAIAARNGWAADSFDFNSAYLNSKLDEDVYLEQPPDHAFADRKAFVLKLEKALYGLKQGGRKWYETLCAALGRLGFTRVEADWGVFYK-HEGEHLIVLAVHVDDCLLTGSSRRLLDDTKSKIGTVYKITDLGPVSWLLGIKISCDLEAGTLSLSQHAYIEALLARFNFTDLKPVSMPMDPHQLLSKTQCPESPAEVARMRRVPYREAIGALMYAALGTRPDIAFAVSTLAQFAQNPGQPHWDAVKRIFRYLLGTRTLSLIYGGQQ---RELEGYVNAD-GATQEHRRAITG 1180
BLAST of mRNA_H-elongata_contig13221.2311.1 vs. uniprot
Match: A0A182HDZ7_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Aedes albopictus TaxID=7160 RepID=A0A182HDZ7_AEDAL) HSP 1 Score: 220 bits (560), Expect = 7.420e-62 Identity = 155/473 (32.77%), Postives = 235/473 (49.68%), Query Frame = 1
Query: 7 WKKAIAREMDGQVARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCHLVAQGFRQVKGLHYEESSSPTPAQVSIRIVLSMITALGWEAWQLDVDMAYLEADVEEEIYVELPEAY--RDSRKQIGLLKKAMYELIHTWLLW*KTFGIELAAKGFQRSQADS*MFRRILHGVVVVVIVAYVDDLLVASATKRDEEQAVRDVYSCFPIKDPGDASYYVGCHITRNAGTLTFDQHQNIQTVAERFGV--TKTSIIPSVAEEKALSKSDSPQTDAEVDKMRQIPYRESVGALMLAATMTRPDILFAAHQLAKFNNNPGPTHWRAAQKALQYLWRTRDLRITCGGEPGGGTKLSAWVDADYGTCPDTRRSVSGGR***LAGSLVGSHECKR*RRRRRPNRNTSRWLRL*TSCVSYDGSRNS*PLQSTSPSRYTRTTKVQSRWRETAFS--------SPRTRHRDIKHHIVRDAI 1389
W A+ E D + W + E PKG++ + + V+K K D G++++YK LV +G+ Q KG+ Y+E+ SP S+R + +M + Q+D A+L+ D+EEEIY+E P + R+ + L KA+Y L + +W L G +S+ D ++ I G V+ V V YVDD+L+ S + + S F +KD G A +G ITR G+++ DQ I ++ RF + KT P EK LSK SP T E ++M+ IPY+E+VG LM A TRPDILF + L++FN GP HW A + +YL T+ +R+ G +KL + DAD+ + D RRS SG L G V S CKR ++T +S + S++ T ++ R + +PRT+H DI+HH +RDA+
Sbjct: 32 WTTAMKEEYDALINNNTWTLTELPKGRSAIKCKWVYKTKHDASGKVDRYKARLVIKGYSQRKGVDYDETYSPVVRHSSLRYLFAMAAKYNLQVDQMDAITAFLQGDIEEEIYMEQPPCFVKPGGRQLVCRLNKALYGLKQSSRVWNTKLDAALKKLGLHQSEFDPCLYYWIEDGKVLFVAV-YVDDVLIFSNDAALKNNLKAKLSSTFRMKDLGSAVSCLGIRITRAKGSVSLDQEAYIDSMLRRFNMQDAKTVSTPMNTAEK-LSKEMSPNTPEETERMKNIPYQEAVGCLMYLAQCTRPDILFTVNLLSRFNCCYGPKHWEAVKHLFRYLKGTKTIRLKY--SAAGDSKLVGYSDADWASDLDDRRSKSGYVFL-LQGGAV-SWCCKR--------QSTVSLSTCEAEYMSLSAAVQEASWWRGLVSQFGETDAIELRCDNQSTICIARNGGYTPRTKHIDIRHHYIRDAL 490
BLAST of mRNA_H-elongata_contig13221.2311.1 vs. uniprot
Match: A0A251UJK4_HELAN (Putative zinc finger, CCHC-type n=7 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UJK4_HELAN) HSP 1 Score: 226 bits (577), Expect = 4.660e-61 Identity = 128/375 (34.13%), Postives = 208/375 (55.47%), Query Frame = 1
Query: 4 QWKKAIAREMDGQVARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCHLVAQGFRQVKGLHYEESSSPTPAQVSIRIVLSMITALGWEAWQLDVDMAYLEADVEEEIYVELPEAYRDSRKQ--IGLLKKAMYELIHTWLLW*KTFGIELAAKGFQRSQADS*MFRRILHGVVVVVIVAYVDDLLVASATKRDEEQAVRDVYSCFPIKDPGDASYYVGC--HITRNAGTLTFDQHQNIQTVAERFGVT--KTSIIPSVAEEKALSKSDSPQTDAEVDKMRQIPYRESVGALMLAATMTRPDILFAAHQLAKFNNNPGPTHWRAAQKALQYLWRTRDLRITCGGEPGGGTKLSAWVDADYGTCPDTRRSVSG 1110
+W KA+ E++ VW +VE P G +G + VFK K+D +G +E+YK LVA+G+ Q +G+ Y+E+ SP + S+RIV++++ E Q+DV A+L D++E++Y++ PE ++ ++ + LKK++Y L W F + +GF ++Q D + + + G ++V YVDD+L+AS + ++ R + F +KD GDASY +G H R+ G L Q I V R+ + K S+ P V + P T+ E ++M QIPY VG+LM A TRPDI + A L ++ NPG HW+AA+K L+YL T+D ++T ++ + D+D+ C D ++S SG
Sbjct: 809 EWNKAMIDELESMKKNDVWDLVELPNGVKPVGCKWVFKTKLDPNGNVERYKARLVAKGYTQKEGIDYQETFSPVSRKDSLRIVMALVAHFDLELHQMDVKTAFLNGDLDEDVYMKQPEGFKPEGQEHLVCKLKKSIYGLKQASRQWYLKFDEVMKRQGFMKNQVDQCTYLK-MSGSDFTILVLYVDDILLASNSLDMLHESKRLLSHNFDMKDLGDASYVIGIEIHRDRHKGILGLSQKAYIDRVLTRYNMQQCKPSVAP-VVKGDVFGSFQCPTTEVEKEQMSQIPYASVVGSLMYAQVCTRPDIAYIAGMLGRYQTNPGLDHWKAAKKVLRYLQGTKDYKLTY--RRSDHLEVVGYSDSDFAKCKDDKKSTSG 1179
BLAST of mRNA_H-elongata_contig13221.2311.1 vs. uniprot
Match: A0A2P6S2B9_ROSCH (Putative RNA-directed DNA polymerase n=2 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6S2B9_ROSCH) HSP 1 Score: 217 bits (552), Expect = 1.280e-60 Identity = 129/375 (34.40%), Postives = 206/375 (54.93%), Query Frame = 1
Query: 7 WKKAIAREMDGQVARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCHLVAQGFRQVKGLHYEESSSPTPAQVSIRIVLSMITALGWEAWQLDVDMAYLEADVEEEIYVELPEAYRDSRKQ--IGLLKKAMYELIHTWLLW*KTFGIELAAKGFQRSQADS*MFRRILHGVVVVVIVAYVDDLLVASATKRDEEQAVRDVYSCFPIKDPGDASYYVGCHI--TRNAGTLTFDQHQNIQTVAERFGVTKTSIIPSVA---EEKALSKSDSPQTDAEVDKMRQIPYRESVGALMLAATMTRPDILFAAHQLAKFNNNPGPTHWRAAQKALQYLWRTRDLRITCGGEPGGGTKLSAWVDADYGTCPDTRRSVSG 1110
W A+ E+ VW++VE P+G +G + VFK K D +G IE+YK LVA+GF Q +G+ Y+E+ SP + S+RI+++++ E Q+DV A+L ++EEE+++ PE + K+ + LKK++Y L W F + + GF+ + D ++ ++ G + ++ YVDD+L+AS+ + + F +KD G+ASY +G I R+ G L Q I+ V ERFG+ K S PS+A + S PQ + E M +IPY +VG+L+ A T TRPDI FA L ++ +NPG HW+A +K ++YL T++ +T ++ + D+D G C DT +S SG
Sbjct: 32 WIDAMNDELKSMDQNKVWELVELPEGCKRVGCKWVFKTKRDSNGNIERYKARLVAKGFTQKEGIDYKETFSPVSKKDSLRIIMALVAHFDLELHQMDVKTAFLNGNLEEEVFMNQPEGFSSKGKEHMVCKLKKSIYGLKQASRQWYLKFNDTVVSFGFKENIVDRCIYLKV-SGSKFIFLILYVDDILLASSDLGLLHETKNFLSKKFEMKDMGEASYVIGIEIFRDRSRGLLGLSQKAYIERVLERFGMEKCS--PSIAPIQKGDKFSLKQCPQNELERKGMERIPYASAVGSLVYAQTCTRPDISFAVGMLGRYQSNPGMDHWKATKKVMRYLQGTKEYMLTY--RRSDNLEVVGYSDSDLGGCLDTGKSTSG 401
BLAST of mRNA_H-elongata_contig13221.2311.1 vs. uniprot
Match: A0A445GJ88_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445GJ88_GLYSO) HSP 1 Score: 225 bits (574), Expect = 1.650e-60 Identity = 132/373 (35.39%), Postives = 205/373 (54.96%), Query Frame = 1
Query: 7 WKKAIAREMDGQVARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCHLVAQGFRQVKGLHYEESSSPTPAQVSIRIVLSMITALGWEAWQLDVDMAYLEADVEEEIYVELPEAYRDSRKQ--IGLLKKAMYELIHTWLLW*KTFGIELAAKGFQRSQADS*MFRRILHGVVVVVIVAYVDDLLVASATKRDEEQAVRDVYSCFPIKDPGDASYYVGCHITRNA--GTLTFDQHQNIQTVAERFGVTKTSIIP-SVAEEKALSKSDSPQTDAEVDKMRQIPYRESVGALMLAATMTRPDILFAAHQLAKFNNNPGPTHWRAAQKALQYLWRTRDLRITCGGEPGGGTKLSAWVDADYGTCPDTRRSVSG 1110
W A+ E+D GVW +VE PKG +G + VFK K D G +E+YK LVA+GF Q G+ Y+E+ SP + S RI+++++T E Q+DV A+L D+EE++Y++ P + K+ + LKK++Y L W F + + GF+ + D ++ ++ G V+ +V YVDD+L+A+ + + + S F +KD G+A+Y +G I RN G L Q I V ERF + K S P + + S + P+ D E +M +I Y VG++M A T TRPDI FA L ++ +NPG HW+AA+K L+YL T+D +T + ++ + D+D+ C DTR+S G
Sbjct: 684 WLNAMKEEIDSMEHNGVWDLVELPKGCKRVGCKWVFKTKRDSHGNLERYKARLVAKGFTQKDGIDYKETFSPVSRKDSFRIIMALVTHYDLELHQMDVKTAFLNGDLEEDVYMDQPMGFSVEGKEHMVCKLKKSIYGLKQASRQWYLKFNDTIVSFGFKENTVDRCVYLKV-SGSKVMFLVLYVDDILIATNDLGLLHETKKFLSSNFEMKDMGEANYVIGIEIFRNRSQGLLGLSQKTYINKVLERFRMEKCSASPVPIQKRDKFSLAQCPKNDLERKQMEEISYASVVGSIMYAQTCTRPDISFATGMLGRYQSNPGMEHWKAAKKVLRYLQGTKDHMLTY--KRSDHLEVIGYSDSDFAGCVDTRKSTLG 1053
BLAST of mRNA_H-elongata_contig13221.2311.1 vs. uniprot
Match: A0A1M2V8C6_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2V8C6_TRAPU) HSP 1 Score: 224 bits (571), Expect = 3.740e-60 Identity = 135/376 (35.90%), Postives = 206/376 (54.79%), Query Frame = 1
Query: 1 PQWKKAIAREMDGQVARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCHLVAQGFRQVKGLHYEESSSPTPAQVSIRIVLSMITALGWEAWQLDVDMAYLEADVEEEIYVELPE--AYRDSRKQIGLLKKAMYELIHTWLLW*KTFGIELAAKGFQRSQADS*MFRRILHGVVVVVIVAYVDDLLVASATKRDEEQAVRDVYSCFPIKDPGDASYYVGCHITRN--AGTLTFDQHQNIQTVAERFGV--TKTSIIPSVAEEKALSKSDSPQTDAEVDKMRQIPYRESVGALMLAATMTRPDILFAAHQLAKFNNNPGPTHWRAAQKALQYLWRTRDLRITCGGEPGGGTKLSAWVDADYGTCPDTRRSVSG 1110
P+W++AI EMD A + +V RP G V+G+R+VF RK D DG I++ K +VAQGF Q+ G+ Y E+ +P S+RI+L++ W QLDV AYL D++EEIY+ P A + + L+K++Y L W K + + G RS+AD F + HG + +V + D ++ + T E+ + + F + D GD ++ +G + R+ AGT+ Q I T+ + K + P +A L K+ P T + + +M IPYRE VG M A TRPDI +A H+LA++ +NPG HW A ++ ++YL TR+L +T GG+ G L+ + DAD+G+ DTR SV G
Sbjct: 1001 PKWEEAITVEMDNLRAHSTYDLVVRPVGAHVIGSRLVFHRKRDADGSIKQCKVRVVAQGFGQIPGVDYNETFAPVAKSSSLRIMLALAARFSWPLIQLDVKSAYLNGDLDEEIYMRQPPGTAAQGEEHLVCRLRKSLYGLKQAGRAWYKKYRDAMTTLGMTRSEADHACFWQ--HGGDSLAMVGTIVDDMLVTGTPDLVEKFRAGIKAEFTVTDAGDVAWLLGIEVVRDLDAGTVRLAQRSAIDTLMRAMHLEGAKPASTP-IAVGGVLDKTQCPTTASAIAEMSGIPYREGVGMCMYIAVTTRPDIAYAVHRLAQYMSNPGRPHWEALKRLVRYLIGTRELWLTYGGDASG---LAGYTDADWGSSDDTRHSVCG 1370
BLAST of mRNA_H-elongata_contig13221.2311.1 vs. uniprot
Match: A0A225WDK2_9STRA (Integrase, catalytic core protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WDK2_9STRA) HSP 1 Score: 217 bits (552), Expect = 5.140e-60 Identity = 136/377 (36.07%), Postives = 206/377 (54.64%), Query Frame = 1
Query: 7 WKKAIAREMDGQVARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCHLVAQGFRQVKGLHYEESSSPTPAQVSIRIVLSMITALGWEAWQLDVDMAYLEADVEEEIYVELPEAYRDSRKQ--IGLLKKAMYELIHTWLLW*KTFGIELAAKGFQRSQADS*MFRRILHGVVVVVIVAYVDDLLVASATKRDEEQAVRDVYSCFPIKDPGDASYYVGCHITRNAG--TLTFDQHQNIQTVAERFGVT-----KTSIIPSVAEEKALSKSDSPQTDAEVDKMRQIPYRESVGALMLAATMTRPDILFAAHQLAKFNNNPGPTHWRAAQKALQYLWRTRDLRITCGGEPGGGTKLSAWVDADYGTCPDTRRSVSG 1110
W+KAI E +A G W++V+ PKGK L ++ +FK K D G IE+YK LV +G+ Q+K + YEE +P S+R++L+++ WE Q DVD A+L D+ EE+Y+ PE ++ K+ + L +A+Y L W K L +KGF + +DS ++ R G V +I YVDDLL+ + T ++ + + F KD G + +G + RN TL+ DQ + V E+F + KT P+V LSK + P+ + E +M+ YR VG+LM T +RPDI F ++K+ N+PG HW AA++ L+Y+ T + G G +L+A+VD+DY DTRRSVSG
Sbjct: 56 WRKAIDEEGRSLIAHGTWKLVKLPKGKRALTSKWIFKIKYDALGNIERYKARLVIRGYEQIKYIDYEEIFAPVIRLESLRLLLALVAINDWECEQTDVDTAFLNGDLAEEVYMIQPEGLEEAGKEDLVCQLLQALYGLKQAPRAWHKKLTDYLKSKGFVKLDSDSCIYVR-TGGSGVAIIGIYVDDLLLIADTASRIQEMKSMLSAGFKCKDMGAVHHILGLRVKRNRALKTLSIDQTAYAKGVIEKFNLMQLNPCKTPCDPNVI----LSKENCPKNEDERAQMKNKDYRGLVGSLMYLMTGSRPDIAFGIQCVSKYLNDPGLAHWNAAKRILRYVKGTIGYGLVIDGRSRTGKQLTAFVDSDYAKDIDTRRSVSG 427
BLAST of mRNA_H-elongata_contig13221.2311.1 vs. uniprot
Match: A0A2N9EM55_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EM55_FAGSY) HSP 1 Score: 223 bits (569), Expect = 5.540e-60 Identity = 132/375 (35.20%), Postives = 208/375 (55.47%), Query Frame = 1
Query: 7 WKKAIAREMDGQVARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCHLVAQGFRQVKGLHYEESSSPTPAQVSIRIVLSMITALGWEAWQLDVDMAYLEADVEEEIYVELPEAY--RDSRKQIGLLKKAMYELIHTWLLW*KTFGIELAAKGFQRSQADS*MFRRILHGVVVVVIVAYVDDLLVASATKRDEEQAVRDVYSCFPIKDPGDASYYVGCHITRNA--GTLTFDQHQNIQTVAERFGVTKTSIIPSVA---EEKALSKSDSPQTDAEVDKMRQIPYRESVGALMLAATMTRPDILFAAHQLAKFNNNPGPTHWRAAQKALQYLWRTRDLRITCGGEPGGGTKLSAWVDADYGTCPDTRRSVSG 1110
W A+ EM+ + GVW +VE P G +G + VFK K D G IE+YK LVA+GF Q +G+ Y E+ SP + S+R++L+++ E Q+DV A+L D+EEE+Y++ PE + D + + LKK++Y L W F +++ GF + D +++++ G + +V YVDD+L+A+ K + + + F +KD G+ASY +G I R+ G L Q I V ERF + S PSVA + + + P+ D E ++M+ IPY +VG+LM A TRPDI FA L ++ ++PG HWRAA+K ++YL T+D + ++ + D+D+ C D+R+S SG
Sbjct: 701 WYNAMKEEMNSMKSNGVWDLVELPNGVKAIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPVSKKDSLRVILALVAHFDLELQQMDVKTAFLNGDLEEEVYMKQPEGFLSSDGEQLVCKLKKSIYGLKQASRQWYLKFHNVISSFGFVENIMDQCIYQKV-SGSKICFLVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFQGILGLSQETYINKVLERFRMNDCS--PSVAPIVKGDRFNLNQCPKNDLEREQMKNIPYASAVGSLMYAQVCTRPDIAFAVGMLGRYQSDPGLDHWRAAKKVMRYLQGTKDYMLMY--RRTDNLEVIGYSDSDFAGCIDSRKSTSG 1070
BLAST of mRNA_H-elongata_contig13221.2311.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL) HSP 1 Score: 214 bits (545), Expect = 6.910e-60 Identity = 133/372 (35.75%), Postives = 201/372 (54.03%), Query Frame = 1
Query: 4 QWKKAIAREMDGQVARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCHLVAQGFRQVKGLHYEESSSPTPAQVSIRIVLSMITALGWEAWQLDVDMAYLEADVEEEIYVELPEAYRDSRKQIGLLKKAMYELIHTWLLW*KTFGIELAAKGFQRSQADS*MFRRILHGVVVVVIVAYVDDLLVASATKRDEEQAVRDVYSCFPIKDPGDASYYVGCHIT--RNAGTLTFDQHQNIQTVAERFGVTKTSIIPSVAEEKA-LSKSDSPQTDAEVDKMRQIPYRESVGALMLAATMTRPDILFAAHQLAKFNNNPGPTHWRAAQKALQYLWRTRDLRITCGGEPGGGTKLSAWVDADYGTCPDTRRSVSG 1110
QW KA+ E D G W V+R V+ T+ VF +K ++ G I ++K LVA GF Q+ G+ + E+ + + SIRI LS+ A G+ QLDVD A+L AD++E++Y+E PE + ++ L KA+Y L W KT L GF+ +D+ ++ G + + YVDD++V T+ ++ + + + F IK+ G + +G I R L+ +Q ++T+ ERF + + E+ LSK+D P+ D + +M + PYR +G L A TRPDI FA L++F NPGP HW AA + L+YL TRD I+ GG+ T + + DAD+GT D RRSVSG
Sbjct: 8 QWLKAVKAEFDAHSRNGTWTKVKRQTWMKVIKTKWVFAKKFNEHGDILRWKARLVALGFLQLFGVDFFETYAAVASMGSIRIFLSVCCAAGYILEQLDVDTAFLNADLKEDVYIEPPEGLKVDGDRVLKLNKALYGLKQAGNAWFKTIHGALIDLGFKPCGSDTCIYVGRAGGDTTYICL-YVDDMVVGGRTQTRVDEVKKLIAARFRIKELGPVKHLLGMEIVYDRVKRYLSINQAHYVKTLVERFNQQSCRDVTNPCEQSLKLSKADGPRDDQQKAEMSKRPYRSLIGCLQYVAQCTRPDIAFAVTHLSRFMENPGPRHWTAAIRVLRYLKSTRDYGISYGGDHEENTPV-VFCDADWGTSVDDRRSVSG 377 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13221.2311.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13221.2311.1 >prot_H-elongata_contig13221.2311.1 ID=prot_H-elongata_contig13221.2311.1|Name=mRNA_H-elongata_contig13221.2311.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=207bp MFRRILHGVVVVVIVAYVDDLLVASATKRDEEQAVRDVYSCFPIKDPGDAback to top mRNA from alignment at H-elongata_contig13221:3108..4585+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13221.2311.1 ID=mRNA_H-elongata_contig13221.2311.1|Name=mRNA_H-elongata_contig13221.2311.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1478bp|location=Sequence derived from alignment at H-elongata_contig13221:3108..4585+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13221:3108..4585+ >mRNA_H-elongata_contig13221.2311.1 ID=mRNA_H-elongata_contig13221.2311.1|Name=mRNA_H-elongata_contig13221.2311.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1242bp|location=Sequence derived from alignment at H-elongata_contig13221:3108..4585+ (Himanthalia elongata Himel1 dioecious)back to top |