mRNA_H-elongata_contig131001.2241.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig131001.2241.1 vs. uniprot
Match: D7FIS7_ECTSI (Similar to G-protein coupled receptors n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIS7_ECTSI) HSP 1 Score: 148 bits (373), Expect = 3.890e-40 Identity = 70/93 (75.27%), Postives = 85/93 (91.40%), Query Frame = 1
Query: 1 QDLLAIQMWTSGVLLLGMMETGAQYFDYRDWNIEGTRSPGVQSFAILVGAAKRALSLSLVLMVCMGYGVVRPSLGRDVHRIMALALVYYITSA 279
+DLLA+Q+W S VL LGM+ETGAQYFDYR+WN+EGTR G + FAI+ GAAKR+LSLSLVLMVCMGYGVVRPSLGRDVH+IMA+AL+Y+++SA
Sbjct: 257 KDLLAVQLWASLVLFLGMVETGAQYFDYREWNLEGTRGVGARCFAIIFGAAKRSLSLSLVLMVCMGYGVVRPSLGRDVHKIMAMALIYFLSSA 349
BLAST of mRNA_H-elongata_contig131001.2241.1 vs. uniprot
Match: A0A7S4D7T8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7T8_HETAK) HSP 1 Score: 92.8 bits (229), Expect = 4.110e-20 Identity = 48/92 (52.17%), Postives = 62/92 (67.39%), Query Frame = 1
Query: 1 QDLLAIQMWTSGVLLLGMMETGAQYFDYRDWNIEGTRSPGVQSFAILVGAAKRALSLSLVLMVCMGYGVVRPSLGRDVHRIMALALVYYITS 276
++LL IQMW + VL LGM ET +YFD+ WN EG R+ G F I++G +KRALS LVLM +GYGVV+PSLGR ++AL Y + S
Sbjct: 191 RELLGIQMWATLVLGLGMTETATKYFDFLAWNDEGRRNLGAMVFGIIMGVSKRALSRILVLMAVLGYGVVKPSLGRTRRNVLALGGAYLVFS 282
BLAST of mRNA_H-elongata_contig131001.2241.1 vs. uniprot
Match: UPI0014552294 (transmembrane protein 87A-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014552294) HSP 1 Score: 89.7 bits (221), Expect = 6.710e-19 Identity = 43/94 (45.74%), Postives = 62/94 (65.96%), Query Frame = 1
Query: 1 QDLLAIQMWTSGVLLLGMMETGAQYFDYRDWNIEGTRSPGVQSFAILVGAAKRALSLSLVLMVCMGYGVVRPSLGRDVHRIMALALVYYITSAV 282
+DLL IQ W GV+LLG++E Y +Y N +GT PG FA LV KR+L+ LV++V +GYG+ RP LGRD+H +M ++Y+I S++
Sbjct: 313 RDLLRIQFWIGGVMLLGLLEKAVFYAEYEHLNTDGTSMPGAIIFAELVSCLKRSLARMLVVIVSLGYGITRPRLGRDLHWLMGAGMMYFILSSI 406
BLAST of mRNA_H-elongata_contig131001.2241.1 vs. uniprot
Match: A0A3B5M657_9TELE (Uncharacterized protein n=1 Tax=Xiphophorus couchianus TaxID=32473 RepID=A0A3B5M657_9TELE) HSP 1 Score: 83.6 bits (205), Expect = 1.370e-18 Identity = 39/89 (43.82%), Postives = 61/89 (68.54%), Query Frame = 1
Query: 1 QDLLAIQMWTSGVLLLGMMETGAQYFDYRDWNIEGTRSPGVQSFAILVGAAKRALSLSLVLMVCMGYGVVRPSLGRDVHRIMALALVYY 267
+DLL IQ W +GV+ LGMME +Y + N+ G+ SPG+ FA L+ A KR L+ LV++V +GYG+++P LG +HR++ L ++Y+
Sbjct: 23 KDLLRIQFWIAGVIFLGMMEKALFCAEYENTNVVGSASPGLLIFAELLSALKRTLARLLVIIVSLGYGIIKPRLGTVMHRVVGLGILYF 111
BLAST of mRNA_H-elongata_contig131001.2241.1 vs. uniprot
Match: A0A7S2WUX5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUX5_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 3.030e-18 Identity = 40/89 (44.94%), Postives = 64/89 (71.91%), Query Frame = 1
Query: 4 DLLAIQMWTSGVLLLGMMETGAQYFDYRDWNIEGTRSPGVQSFAILVGAAKRALSLSLVLMVCMGYGVVRPSLGRDVHRIMALALVYYI 270
+LL +QMW S V+ +GM+ETG ++ DY +N EG R+ G+ + ++ G KRA+S LV+MV +GY +V+PSLG +HR++ L L+Y++
Sbjct: 252 ELLVLQMWISVVVGMGMLETGMKFADYLTFNAEGERNMGMLATGLVFGVTKRAVSRVLVVMVSLGYSIVKPSLGPQLHRVLLLGLIYFV 340
BLAST of mRNA_H-elongata_contig131001.2241.1 vs. uniprot
Match: A0A7S2XZ88_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ88_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 4.240e-18 Identity = 44/88 (50.00%), Postives = 58/88 (65.91%), Query Frame = 1
Query: 1 QDLLAIQMWTSGVLLLGMMETGAQYFDYRDWNIEGTRSPGVQSFAILVGAAKRALSLSLVLMVCMGYGVVRPSLGRDVHRIMALALVY 264
+DLL +Q+W S VL LGM+ET +YFD+ W+ EG R+ G F ++ G KRALS LVL+V +GYGVV+PSLG I+ L Y
Sbjct: 247 KDLLPVQLWISFVLFLGMVETTTKYFDFLAWDEEGHRNLGAMVFGMISGVCKRALSRMLVLIVSLGYGVVKPSLGNTFRMILMLGAAY 334
BLAST of mRNA_H-elongata_contig131001.2241.1 vs. uniprot
Match: UPI0018D5C4B5 (transmembrane protein 87A-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D5C4B5) HSP 1 Score: 86.3 bits (212), Expect = 1.110e-17 Identity = 41/94 (43.62%), Postives = 62/94 (65.96%), Query Frame = 1
Query: 1 QDLLAIQMWTSGVLLLGMMETGAQYFDYRDWNIEGTRSPGVQSFAILVGAAKRALSLSLVLMVCMGYGVVRPSLGRDVHRIMALALVYYITSAV 282
+DLL IQ W GV+LLG++E Y +Y + N G PG A L+ KRAL+ LV++VC+GYG+ RP LG+D+H ++ + ++Y+I S+V
Sbjct: 334 RDLLRIQFWIGGVMLLGLLEKAVFYAEYENINNYGMSVPGAIIMAELISCFKRALARMLVVIVCLGYGITRPRLGKDLHWVLGVGMLYFIMSSV 427
BLAST of mRNA_H-elongata_contig131001.2241.1 vs. uniprot
Match: A0A7R8X921_9CRUS (Hypothetical protein n=2 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R8X921_9CRUS) HSP 1 Score: 85.1 bits (209), Expect = 2.880e-17 Identity = 40/94 (42.55%), Postives = 62/94 (65.96%), Query Frame = 1
Query: 1 QDLLAIQMWTSGVLLLGMMETGAQYFDYRDWNIEGTRSPGVQSFAILVGAAKRALSLSLVLMVCMGYGVVRPSLGRDVHRIMALALVYYITSAV 282
+DLL IQ W GV+ LGM+E Y +++ N GT PG FA L+ AKR LS LV++V +G+G+V+P LG +HR++ + ++Y+I ++V
Sbjct: 268 KDLLRIQFWIGGVIFLGMIEKAVYYAEFQSINSSGTSVPGAAVFAELISCAKRTLSRMLVIIVSLGFGIVKPRLGSMLHRVVGVGVLYFILASV 361
BLAST of mRNA_H-elongata_contig131001.2241.1 vs. uniprot
Match: A0A553R627_9TELE (Uncharacterized protein n=1 Tax=Danionella translucida TaxID=623744 RepID=A0A553R627_9TELE) HSP 1 Score: 85.1 bits (209), Expect = 2.900e-17 Identity = 42/94 (44.68%), Postives = 65/94 (69.15%), Query Frame = 1
Query: 1 QDLLAIQMWTSGVLLLGMMETGAQYFDYRDWNIEGTRSPGVQSFAILVGAAKRALSLSLVLMVCMGYGVVRPSLGRDVHRIMALALVYYITSAV 282
+DLL IQ W +GV+LLGM+E +Y++ N G+ SPG+ FA LV A KR L+ LV++V +GYG+V+P LG +HR++ L ++Y+ +A+
Sbjct: 642 KDLLRIQFWIAGVILLGMIEKAVFCAEYQNTNTVGSASPGLLIFAELVSALKRTLARLLVIIVSLGYGIVKPRLGTVMHRVVGLGVLYFAFAAI 735
BLAST of mRNA_H-elongata_contig131001.2241.1 vs. uniprot
Match: A0A665WC10_ECHNA (Transmembrane protein 87A n=1 Tax=Echeneis naucrates TaxID=173247 RepID=A0A665WC10_ECHNA) HSP 1 Score: 79.7 bits (195), Expect = 5.000e-17 Identity = 41/94 (43.62%), Postives = 61/94 (64.89%), Query Frame = 1
Query: 1 QDLLAIQMWTSGVLLLGMMETGAQYFDYRDWNIEGTRSPGVQSFAILVGAAKRALSLSLVLMVCMGYGVVRPSLGRDVHRIMALALVYYITSAV 282
+DLL IQ W V++LGM+E Y +Y+ +G G FA L+ A KR+L+ LVL+V +GYG+V+P LG VHR++A+ L+Y + S+V
Sbjct: 23 RDLLRIQFWIGAVIILGMLEKAVFYSEYQSIRYKGDYVQGAVIFAELLSALKRSLARILVLIVSLGYGIVKPRLGTTVHRLVAVGLLYLLFSSV 116 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig131001.2241.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig131001.2241.1 >prot_H-elongata_contig131001.2241.1 ID=prot_H-elongata_contig131001.2241.1|Name=mRNA_H-elongata_contig131001.2241.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp MWTSGVLLLGMMETGAQYFDYRDWNIEGTRSPGVQSFAILVGAAKRALSLback to top mRNA from alignment at H-elongata_contig131001:246..1502- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig131001.2241.1 ID=mRNA_H-elongata_contig131001.2241.1|Name=mRNA_H-elongata_contig131001.2241.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1257bp|location=Sequence derived from alignment at H-elongata_contig131001:246..1502- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig131001:246..1502- >mRNA_H-elongata_contig131001.2241.1 ID=mRNA_H-elongata_contig131001.2241.1|Name=mRNA_H-elongata_contig131001.2241.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=522bp|location=Sequence derived from alignment at H-elongata_contig131001:246..1502- (Himanthalia elongata Himel1 dioecious)back to top |