mRNA_H-elongata_contig12881.2120.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12881.2120.1 vs. uniprot
Match: A0A6H5L498_9PHAE (Inhibitor of growth protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L498_9PHAE) HSP 1 Score: 271 bits (694), Expect = 1.470e-88 Identity = 137/197 (69.54%), Postives = 152/197 (77.16%), Query Frame = 1
Query: 7 TARTQRSRSSKGTKNIRSRQQEALANGPVPDGWRTPEVRALEDEINSRIDLVLRMSDEKWRLAQHAYDSLDINIRRLDSDLGRMETDLRRQGLLPPREVPEMTP-RKRRRTGTEKQRDDEPVSDWL--NLANRDDLPVDPNEPKYCLCNQVSYGEMVGCDNQSCDNGEWFHFGCVKITKKPVGRWLCPGCTAQRRQS 588
T R ++SR+ KG ++R Q GPVPDGWRTPE+RALED+INSRIDLVLRM+DEKWRLAQHAYD LD+NIR RRQGLLPPREV P RKRRR+G EK DEP SDWL +L+ RDDLPVDPNEP YCLC QVSYG+MVGCDN SCDNGEWFHFGCV +TK+P GRWLCPGCTAQRRQS
Sbjct: 78 TGRAKKSRTKKGAP--KTRPQARATKGPVPDGWRTPEIRALEDQINSRIDLVLRMADEKWRLAQHAYDRLDVNIRXXXXXXXXXXXXXRRQGLLPPREVSATPPSRKRRRSGAEKT--DEPESDWLGLSLSERDDLPVDPNEPVYCLCMQVSYGKMVGCDNPSCDNGEWFHFGCVNLTKRPPGRWLCPGCTAQRRQS 270
BLAST of mRNA_H-elongata_contig12881.2120.1 vs. uniprot
Match: D8LSA3_ECTSI (PHD finger protein-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSA3_ECTSI) HSP 1 Score: 138 bits (347), Expect = 6.120e-38 Identity = 77/125 (61.60%), Postives = 89/125 (71.20%), Query Frame = 1
Query: 19 QRSRSSKGTKNIRSRQQEALANGPVPDGWRTPEVRALEDEINSRIDLVLRMSDEKWRLAQHAYDSLDINIRRLDSDLGRMETDLRRQGLLPPREVPEMTP-RKRRRTGTEKQRDDEPVSDWLNLA 390
++SR+ KG ++R Q GPVPDGWRTPE+RALED+INSRIDLVLRM+DEKWRLAQHAYD LD+NIR RRQGL+PPREV P RKRRR+G EK DEP SDWL L+
Sbjct: 24 EKSRTKKGAP--KTRPQARATEGPVPDGWRTPEIRALEDQINSRIDLVLRMADEKWRLAQHAYDRLDVNIRXXXXXXXXXXXXXRRQGLIPPREVSATPPSRKRRRSGAEKT--DEPDSDWLGLS 144
BLAST of mRNA_H-elongata_contig12881.2120.1 vs. uniprot
Match: A0A0L8HFQ6_OCTBM (Inhibitor of growth protein n=5 Tax=Coleoidea TaxID=6606 RepID=A0A0L8HFQ6_OCTBM) HSP 1 Score: 130 bits (327), Expect = 6.040e-34 Identity = 70/177 (39.55%), Postives = 101/177 (57.06%), Query Frame = 1
Query: 133 DEINSRIDLVLRMSDEKWRLAQHAYDSLDINIRRLDSDLGRMETDLRRQGLLPPREVPEMTPR-KRRRTGTEKQRDDE-------------------------PVSDWLNLANRDDLPVDPNEPKYCLCNQVSYGEMVGCDNQSCDNGEWFHFGCVKITKKPVGRWLCPGCTAQRRQ 585
D IN R + L D+K +LA Y+ +D +IR+LD+DL R E DL+ + + P+E P + + K++R + + +DE P+S + ++ D+PVDPNEP YCLC+QVSYGEM+GCDN C EWFHF CV +T KP G+W CP C +R++
Sbjct: 66 DSINLRYNKSLGFGDDKVQLAMQTYEMVDKHIRKLDADLARFEADLKEKSITKPKEGPTIKVKDKKKRKSLKTEYEDEIPKKKKNKKSSLQIQPDMENSLPSLPLS-ITHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPI-EWFHFACVGLTTKPKGKWYCPRCQEERKK 240
BLAST of mRNA_H-elongata_contig12881.2120.1 vs. uniprot
Match: UPI00109BA221 (inhibitor of growth protein 5 isoform X2 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BA221) HSP 1 Score: 130 bits (326), Expect = 7.680e-34 Identity = 75/188 (39.89%), Postives = 102/188 (54.26%), Query Frame = 1
Query: 91 VPDGWRTPEVRALEDEINSRIDLVLRMSDEKWRLAQHAYDSLDINIRRLDSDLGRMETDLRRQ-----GLLPPREVPEMTPRKRRRTGTEKQRDDEPVSDWLN------------------LANRDDLPVDPNEPKYCLCNQVSYGEMVGCDNQSCDNGEWFHFGCVKITKKPVGRWLCPGCTAQRRQ 585
+ G RT ++ +E + + V D+K +LA Y+ +D +IR+LDSDL R E DL+ Q G+ E E+TP KR R T K++D EP + D+PVDPNEP YC+C+QVSYGEM+GCDN C EWFHF CV +T KP G+W CP C +R++
Sbjct: 56 MDSGERTDHLKKIEVAFSKSKEYV----DDKVQLAMQTYEMVDKHIRKLDSDLARFECDLKEQKAKESGISEYEE--EVTPPKRGRGRTSKKKDSEPXXXXXRDSSPVKTLGVTATLFSPEVVQVLDMPVDPNEPTYCICHQVSYGEMIGCDNIECPI-EWFHFPCVGLTAKPKGKWYCPKCAQERKK 236
BLAST of mRNA_H-elongata_contig12881.2120.1 vs. uniprot
Match: A0A6F9DFP4_9ASCI (Inhibitor of growth protein n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DFP4_9ASCI) HSP 1 Score: 129 bits (325), Expect = 1.140e-33 Identity = 71/163 (43.56%), Postives = 93/163 (57.06%), Query Frame = 1
Query: 172 SDEKWRLAQHAYDSLDINIRRLDSDLGRMETDLRRQGLLPPREVP----EMTPRKRRRTGTEKQRDDE------------------PVSDWLNLANRDDLPVDPNEPKYCLCNQVSYGEMVGCDNQSCDNGEWFHFGCVKITKKPVGRWLCPGCTAQRRQSRR 594
SD+K +LA Y+ +D +IRRLDSDL R E DL+ + + E T +KRR+ G DDE P++ ++ D+PVDPNEP YCLC+QVSYGEM+GCDNQ C EWFHFGCV +T KP G+W CP C R + ++
Sbjct: 79 SDDKVQLAMQTYEMVDKHIRRLDSDLARFEADLKEKSVQDATGTSKVDIESTDKKRRKKGRITS-DDEGKNARKRQKTAVDVHLATPLAAAYQQSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNQDCPI-EWFHFGCVGLTSKPKGKWFCPKCREDRDRKKK 239
BLAST of mRNA_H-elongata_contig12881.2120.1 vs. uniprot
Match: S7MF70_MYOBR (Inhibitor of growth protein n=1 Tax=Myotis brandtii TaxID=109478 RepID=S7MF70_MYOBR) HSP 1 Score: 127 bits (318), Expect = 4.520e-33 Identity = 75/180 (41.67%), Postives = 97/180 (53.89%), Query Frame = 1
Query: 109 TPEVRALE-DEINSRIDLVLRMSDEKWRLAQHAYDSLDINIRRLDSDLGRMETDL----------------RRQGLLPPREVPEMTPRKRRRTGTEKQRDDEPVSDWLNLANRD--DLPVDPNEPKYCLCNQVSYGEMVGCDNQSCDNGEWFHFGCVKITKKPVGRWLCPGCTAQRRQSR 591
+PE R +I S SD+K +LA Y+ +D +IRRLD+DL R E DL R +G R E TP+K++ G E L++ D D+PVDPNEP YCLC+QVSYGEM+GCDN C EWFHF CV +T KP G+W CP C +RR+ +
Sbjct: 30 SPEQRVEHLQKIQSAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDKLEEGRSQKEKRSSRGRGR---RTSEEDTPKKKKHKGGS-----EFTDTILSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPI-EWFHFACVDLTTKPKGKWFCPRCVQERRKKK 200
BLAST of mRNA_H-elongata_contig12881.2120.1 vs. uniprot
Match: A0A8C4XFU3_ERPCA (Inhibitor of growth protein n=2 Tax=Polypteridae TaxID=8289 RepID=A0A8C4XFU3_ERPCA) HSP 1 Score: 128 bits (321), Expect = 4.740e-33 Identity = 70/161 (43.48%), Postives = 98/161 (60.87%), Query Frame = 1
Query: 172 SDEKWRLAQHAYDSLDINIRRLDSDLGRMETDLRRQGLLPPREVPE-------------MTPRKRRRTGTE----KQRDDEPVSDW------LNLANRDDLPVDPNEPKYCLCNQVSYGEMVGCDNQSCDNGEWFHFGCVKITKKPVGRWLCPGCTAQRRQ 585
SD+K +LA Y+ +D +IRRLD+DL R E DL+ + + E PE TP+ R R G++ K++ + SD+ ++ ++ D+PVDPNEP YCLC+QVSYGEM+GCDN C EWFHF CV +T KP G+W CP CT +R++
Sbjct: 81 SDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKEKLEVSGYESPEGRGMKKGRGQKDKKTPKGRGRKGSDEESPKKKKLKTGSDYSDSILAVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNNDCPI-EWFHFACVDLTTKPKGKWYCPRCTQERKK 240
BLAST of mRNA_H-elongata_contig12881.2120.1 vs. uniprot
Match: A0A6P8HS57_ACTTE (Inhibitor of growth protein n=4 Tax=Actiniaria TaxID=6103 RepID=A0A6P8HS57_ACTTE) HSP 1 Score: 127 bits (318), Expect = 1.360e-32 Identity = 76/192 (39.58%), Postives = 102/192 (53.12%), Query Frame = 1
Query: 91 VPDGWRTPEVRALEDEINSRIDLVLRMSDEKWRLAQHAYDSLDINIRRLDSDLGRMETDLRRQ-----GLLPPREVPEMTPRKRRRTGTEKQRDDEPVSDWLNLANRD----------------------DLPVDPNEPKYCLCNQVSYGEMVGCDNQSCDNGEWFHFGCVKITKKPVGRWLCPGCTAQRRQ 585
+ G RT ++ +E + + V D+K +LA Y+ +D +IR+LDSDL R E DL+ Q GL E E+TP K+ R K++ DEP RD D+PVDPNEP YC+C+QVSYGEM+GCDN C EWFHF CV +T KP G+W CP C +R++
Sbjct: 60 MDSGQRTDHLKKIEIAFSKSKEYV----DDKVQLAMQTYEMVDKHIRKLDSDLARFEMDLKEQKAKEAGLSDYEE--EITPPKKGRGRMSKRKADEPAK---KKKKRDTSPAKSLGVTATLFSPEVVQVLDMPVDPNEPTYCICHQVSYGEMIGCDNIECPI-EWFHFPCVGLTAKPKGKWYCPKCAQERKK 241
BLAST of mRNA_H-elongata_contig12881.2120.1 vs. uniprot
Match: A0A6J0Z416_ODOVR (Inhibitor of growth protein n=1 Tax=Odocoileus virginianus texanus TaxID=9880 RepID=A0A6J0Z416_ODOVR) HSP 1 Score: 123 bits (309), Expect = 1.500e-31 Identity = 73/177 (41.24%), Postives = 93/177 (52.54%), Query Frame = 1
Query: 136 EINSRIDLVLRMSDEKWRLAQHAYDSLDINIRRLDSDLGRMETDLRRQ------------GLLPPREVPEMTPRKRRRTGTEKQRDDEP-----------VSDWLNLANRD--DLPVDPNEPKYCLCNQVSYGEMVGCDNQSCDNGEWFHFGCVKITKKPVGRWLCPGCTAQRRQSR 591
+I S + SD+K +LA Y+ +D +IRRLD+DL R E DL+ + GL R E R R G DD P L++ D D+PVDPNEP YCLC+QVSYGEM+GCDN C EWFHF CV +T KP G+W CP C +RR+ +
Sbjct: 42 KIQSAYNKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDKLEGSDFESSGGRGLKKGRGQKEK--RGSRGRGRRTSEDDTPKKKKHKGGSEFTDTILSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPI-EWFHFACVDLTTKPKGKWFCPRCVQERRKKK 215
BLAST of mRNA_H-elongata_contig12881.2120.1 vs. uniprot
Match: UPI00193ADF99 (inhibitor of growth protein 5-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193ADF99) HSP 1 Score: 124 bits (311), Expect = 1.740e-31 Identity = 65/171 (38.01%), Postives = 92/171 (53.80%), Query Frame = 1
Query: 172 SDEKWRLAQHAYDSLDINIRRLDSDLGRMETDL---------------------------RRQGLLPPREVPEMTPRKRRRTGTEKQRDDEPVSDWLNLANRDD---LPVDPNEPKYCLCNQVSYGEMVGCDNQSCDNGEWFHFGCVKITKKPVGRWLCPGCTAQRRQSRR 594
+D+K +LA Y+ +D +IR+LDSDL R E DL R++G E +K+ ++G ++ P+ ++ + D +PVDPNEP YCLC+QVSYGEM+GCDN C EWFHFGCV +T KP G+W CP C +R + +R
Sbjct: 79 ADDKVQLAMQTYEMVDKHIRKLDSDLARFEADLKEKSIHDSNVAGTSKADTDSGPSDKKRRKKGRAANSEDXXXXXKKKHKSGLDQSLSSVPLVSGISAYSSSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPI-EWFHFGCVNLTSKPKGKWFCPKCREERDKKKR 248 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12881.2120.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12881.2120.1 >prot_H-elongata_contig12881.2120.1 ID=prot_H-elongata_contig12881.2120.1|Name=mRNA_H-elongata_contig12881.2120.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=213bp MATARTQRSRSSKGTKNIRSRQQEALANGPVPDGWRTPEVRALEDEINSRback to top mRNA from alignment at H-elongata_contig12881:4584..7000- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig12881.2120.1 ID=mRNA_H-elongata_contig12881.2120.1|Name=mRNA_H-elongata_contig12881.2120.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2417bp|location=Sequence derived from alignment at H-elongata_contig12881:4584..7000- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig12881:4584..7000- >mRNA_H-elongata_contig12881.2120.1 ID=mRNA_H-elongata_contig12881.2120.1|Name=mRNA_H-elongata_contig12881.2120.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1278bp|location=Sequence derived from alignment at H-elongata_contig12881:4584..7000- (Himanthalia elongata Himel1 dioecious)back to top |