mRNA_H-elongata_contig12522.1895.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12522.1895.1 vs. uniprot
Match: A0A6H5L2V5_9PHAE (Beta_elim_lyase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2V5_9PHAE) HSP 1 Score: 177 bits (450), Expect = 4.120e-51 Identity = 86/124 (69.35%), Postives = 99/124 (79.84%), Query Frame = 1
Query: 1 SGTMGNLIGVGAQCQRGDEIILGRKSHIFEYEGMGASAFMGVAYHTLDNLEDGSLDITAIASALRGDDQHYPRSALLCLENTQNLCGARAIGVKRMREMCAAARRGGIKVHVDGERSLKERVTV 372
SGTMGNLI VGA C+RGDE+ILG KSHIF+YEG GASA MGV+YHT+ N EDG L++ I +A+RGDD HYPRS+LLCLENTQNLCGARAI RM EMCAA R G+KVHVDG R V++
Sbjct: 210 SGTMGNLIAVGAHCRRGDELILGDKSHIFQYEGAGASALMGVSYHTVRNAEDGGLEVADIETAVRGDDPHYPRSSLLCLENTQNLCGARAIAPARMAEMCAAGRHAGLKVHVDGARLWNAAVSL 333
BLAST of mRNA_H-elongata_contig12522.1895.1 vs. uniprot
Match: A0A8K1FA57_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FA57_PYTOL) HSP 1 Score: 140 bits (353), Expect = 3.050e-38 Identity = 67/124 (54.03%), Postives = 89/124 (71.77%), Query Frame = 1
Query: 1 SGTMGNLIGVGAQCQRGDEIILGRKSHIFEYEGMGASAFMGVAYHTLDNLEDGSLDITAIASALRGDDQHYPRSALLCLENTQNLCGARAIGVKRMREMCAAARRGGIKVHVDGERSLKERVTV 372
SGTMGNLI +GA C+RGDEIILG KSHIF YEG GASA+MGV++HTL N +G+L + + +A+R DDQHYPR+ L+ LENT N CG R + V + E+ A R+ +++H+DG R V +
Sbjct: 42 SGTMGNLIAIGAHCRRGDEIILGNKSHIFMYEGGGASAYMGVSFHTLPNQANGTLRLDDLKNAVRDDDQHYPRTRLVALENTHNTCGGRVLSVDYVNEVAAFCRQQKLQLHIDGARLANASVAL 165
BLAST of mRNA_H-elongata_contig12522.1895.1 vs. uniprot
Match: A0A2D4C5R1_PYTIN (L-allo-threonine aldolase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5R1_PYTIN) HSP 1 Score: 138 bits (347), Expect = 3.080e-37 Identity = 66/124 (53.23%), Postives = 89/124 (71.77%), Query Frame = 1
Query: 1 SGTMGNLIGVGAQCQRGDEIILGRKSHIFEYEGMGASAFMGVAYHTLDNLEDGSLDITAIASALRGDDQHYPRSALLCLENTQNLCGARAIGVKRMREMCAAARRGGIKVHVDGERSLKERVTV 372
SGTMGNLI VG C+RGDEIILG KSHIF YEG GASA+MGV +H++ N DG+L + +A+A+R DD HYPR+ L+ LENT N CG R + ++ + ++ A R+ G+++HVDG R V +
Sbjct: 54 SGTMGNLIAVGVHCRRGDEIILGDKSHIFMYEGAGASAYMGVGFHSVRNQSDGTLALEDLANAVRADDPHYPRTRLVALENTHNTCGGRVLPLEFLEQVEAFCRQRGLRLHVDGARLANASVAL 177
BLAST of mRNA_H-elongata_contig12522.1895.1 vs. uniprot
Match: A0A6G0XNI5_9STRA (Beta_elim_lyase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XNI5_9STRA) HSP 1 Score: 137 bits (346), Expect = 5.210e-37 Identity = 65/116 (56.03%), Postives = 84/116 (72.41%), Query Frame = 1
Query: 1 SGTMGNLIGVGAQCQRGDEIILGRKSHIFEYEGMGASAFMGVAYHTLDNLEDGSLDITAIASALRGDDQHYPRSALLCLENTQNLCGARAIGVKRMREMCAAARRGGIKVHVDGER 348
SGTMGNLI VG C RGDE+ILG KSH+F+YEG GASAF+GV+ HT+ N DGSL + I +A+R DD H+PRS L+ +ENT N CG R + + ++ + A R G+K+HVDG R
Sbjct: 62 SGTMGNLISVGVHCNRGDEVILGNKSHVFKYEGGGASAFLGVSMHTVPNQADGSLLLEDIEAAIREDDPHFPRSQLVVIENTHNTCGGRVVPTETVQSISALCERRGLKLHVDGAR 177
BLAST of mRNA_H-elongata_contig12522.1895.1 vs. uniprot
Match: A0A0P1AV90_PLAHL (L-allo-threonine aldolase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AV90_PLAHL) HSP 1 Score: 130 bits (327), Expect = 7.970e-36 Identity = 60/116 (51.72%), Postives = 84/116 (72.41%), Query Frame = 1
Query: 1 SGTMGNLIGVGAQCQRGDEIILGRKSHIFEYEGMGASAFMGVAYHTLDNLEDGSLDITAIASALRGDDQHYPRSALLCLENTQNLCGARAIGVKRMREMCAAARRGGIKVHVDGER 348
SGTM NLI +G C+RG+EII G K+HIF YEG GASA+MGV+ HT++N DG+LDI + +A+R DD HYPR++L+ +ENTQN CG R + + +R + + +++HVDG R
Sbjct: 64 SGTMSNLIAIGTHCRRGEEIICGDKAHIFLYEGAGASAYMGVSLHTVENQRDGTLDIKDVQNAIRADDPHYPRTSLVTIENTQNTCGGRVLPQQFVRTLEQLCHKRNLRLHVDGAR 179
BLAST of mRNA_H-elongata_contig12522.1895.1 vs. uniprot
Match: A0A8K1FBA4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBA4_PYTOL) HSP 1 Score: 133 bits (334), Expect = 3.110e-35 Identity = 64/124 (51.61%), Postives = 85/124 (68.55%), Query Frame = 1
Query: 1 SGTMGNLIGVGAQCQRGDEIILGRKSHIFEYEGMGASAFMGVAYHTLDNLEDGSLDITAIASALRGDDQHYPRSALLCLENTQNLCGARAIGVKRMREMCAAARRGGIKVHVDGERSLKERVTV 372
SGTM NLI VGA C+RGDEIILG K+HI YEG GASA+MGV++ T+ N DG+L + + A+RGDD HYPRS L+ LENTQN CG R + V+ ++ A + +++H+DG R V +
Sbjct: 63 SGTMANLIAVGAHCRRGDEIILGDKAHIVTYEGGGASAYMGVSFRTVPNQTDGTLRLEDLKDAIRGDDPHYPRSRLVALENTQNNCGGRVLSVEYTNQVAAFCKEHNLRLHIDGARLANASVAL 186
BLAST of mRNA_H-elongata_contig12522.1895.1 vs. uniprot
Match: A0A485LPZ3_9STRA (Aste57867_24183 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LPZ3_9STRA) HSP 1 Score: 130 bits (327), Expect = 3.240e-34 Identity = 61/116 (52.59%), Postives = 79/116 (68.10%), Query Frame = 1
Query: 1 SGTMGNLIGVGAQCQRGDEIILGRKSHIFEYEGMGASAFMGVAYHTLDNLEDGSLDITAIASALRGDDQHYPRSALLCLENTQNLCGARAIGVKRMREMCAAARRGGIKVHVDGER 348
SGTMGNLI VG C RGDE+ILG KSH+F+YEG G SA+MGV HT+ N +G++ + I SA+RGDD HYPRS L+ +ENT N CG R + + + + +K+HVDG R
Sbjct: 62 SGTMGNLIAVGVHCNRGDEVILGNKSHVFKYEGAGVSAYMGVGMHTVPNQTNGTMFVPDIQSAIRGDDPHYPRSRLVIVENTHNTCGGRVVPTETVASIADICDAHDLKLHVDGAR 177
BLAST of mRNA_H-elongata_contig12522.1895.1 vs. uniprot
Match: A0A5D6XWH6_9STRA (Beta_elim_lyase domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWH6_9STRA) HSP 1 Score: 130 bits (326), Expect = 4.810e-34 Identity = 63/116 (54.31%), Postives = 81/116 (69.83%), Query Frame = 1
Query: 1 SGTMGNLIGVGAQCQRGDEIILGRKSHIFEYEGMGASAFMGVAYHTLDNLEDGSLDITAIASALRGDDQHYPRSALLCLENTQNLCGARAIGVKRMREMCAAARRGGIKVHVDGER 348
SGTM NLI +GA C RGDEII+G K+HIF YEG GASA++GV HT+ N DG+L + I SA+R DD HYPR+ L+ +ENT N CG R + + +RE+ R +K+HVDG R
Sbjct: 64 SGTMSNLIALGAHCNRGDEIIVGDKAHIFMYEGAGASAYLGVGLHTVRNQADGTLALADIRSAVRADDPHYPRTRLVAIENTHNTCGGRVLPLAFVREVEGFCRDASLKLHVDGAR 179
BLAST of mRNA_H-elongata_contig12522.1895.1 vs. uniprot
Match: A0A1V9ZG07_9STRA (L-allo-threonine aldolase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZG07_9STRA) HSP 1 Score: 129 bits (325), Expect = 6.760e-34 Identity = 59/116 (50.86%), Postives = 81/116 (69.83%), Query Frame = 1
Query: 1 SGTMGNLIGVGAQCQRGDEIILGRKSHIFEYEGMGASAFMGVAYHTLDNLEDGSLDITAIASALRGDDQHYPRSALLCLENTQNLCGARAIGVKRMREMCAAARRGGIKVHVDGER 348
SGTM NLI VGA CQRGDEI+LG+KSHIF YEG G SA++GV +T+ +GSL + + SA+R DD HYPR+ L+ +ENT N CG R + + +R++ + +K+H+DG R
Sbjct: 62 SGTMSNLIAVGAHCQRGDEIVLGKKSHIFTYEGAGVSAYLGVGMNTVPTQPNGSLSVADVESAIRDDDPHYPRTTLVAVENTHNTCGGRVVPTEAIRDIASICASHNLKLHMDGAR 177
BLAST of mRNA_H-elongata_contig12522.1895.1 vs. uniprot
Match: H3G779_PHYRM (Beta_elim_lyase domain-containing protein n=22 Tax=Phytophthora TaxID=4783 RepID=H3G779_PHYRM) HSP 1 Score: 127 bits (318), Expect = 6.030e-33 Identity = 60/116 (51.72%), Postives = 82/116 (70.69%), Query Frame = 1
Query: 1 SGTMGNLIGVGAQCQRGDEIILGRKSHIFEYEGMGASAFMGVAYHTLDNLEDGSLDITAIASALRGDDQHYPRSALLCLENTQNLCGARAIGVKRMREMCAAARRGGIKVHVDGER 348
SGTM NLI +G CQRGDE+I G KSHIF YEG GASA+MGV+ TL N DG++ ++ +A+A+R DD HYPR++L+ +ENT N CG R + + +RE+ + + +HVDG R
Sbjct: 56 SGTMSNLIAIGTHCQRGDEVICGNKSHIFTYEGAGASAYMGVSLATLPNQPDGTIKLSDMAAAVRADDIHYPRTSLVEIENTHNTCGGRVLPLSYIREVEQFCKEHNLSLHVDGAR 171 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12522.1895.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12522.1895.1 >prot_H-elongata_contig12522.1895.1 ID=prot_H-elongata_contig12522.1895.1|Name=mRNA_H-elongata_contig12522.1895.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=122bp MGNLIGVGAQCQRGDEIILGRKSHIFEYEGMGASAFMGVAYHTLDNLEDGback to top mRNA from alignment at H-elongata_contig12522:4736..5793+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig12522.1895.1 ID=mRNA_H-elongata_contig12522.1895.1|Name=mRNA_H-elongata_contig12522.1895.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1058bp|location=Sequence derived from alignment at H-elongata_contig12522:4736..5793+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig12522:4736..5793+ >mRNA_H-elongata_contig12522.1895.1 ID=mRNA_H-elongata_contig12522.1895.1|Name=mRNA_H-elongata_contig12522.1895.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=732bp|location=Sequence derived from alignment at H-elongata_contig12522:4736..5793+ (Himanthalia elongata Himel1 dioecious)back to top |